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Spatial chemistry of citrus reveals molecules bactericidal to Candidatus Liberibacter asiaticus. Sci Rep. 2024 09 02; 14(1):20306.
A Aksenov A, Blacutt A, Ginnan N, Rolshausen PE, V Melnik A, Lotfi A, C Gentry E, Ramasamy M, Zuniga C, Zengler K, Mandadi KK, Dorrestein PC, Roper MC. PMID: 39218988; PMCID: PMC11366753.
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SkinCom, a synthetic skin microbial community, enables reproducible investigations of the human skin microbiome. Cell Rep Methods. 2024 Jul 30; 100832.
Lekbua A, Thiruppathy D, Coker J, Weng Y, Askarian F, Kousha A, Marotz C, Hauw A, Nizet V, Zengler K. PMID: 39111313.
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Translation:
HumansAnimalsCells
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Mixotrophic growth of a ubiquitous marine diatom. Sci Adv. 2024 Jul 19; 10(29):eado2623.
Kumar M, Tibocha-Bonilla JD, Füssy Z, Lieng C, Schwenck SM, Levesque AV, Al-Bassam MM, Passi A, Neal M, Zuniga C, Kaiyom F, Espinoza JL, Lim H, Polson SW, Allen LZ, Zengler K. PMID: 39018398; PMCID: PMC466952.
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PubMed Mentions: Fields:
Translation:
AnimalsCells
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Pathogenic Bacteroides fragilis strains can emerge from gut-resident commensals. bioRxiv. 2024 Jun 19.
Oles RE, Terrazas MC, Loomis LR, Neal MJ, Paulchakrabarti M, Zuffa S, Hsu CY, Vasquez Ayala A, Lee MH, Tribelhorn C, Belda-Ferre P, Bryant M, Zemlin J, Young J, Dulai P, Sandborn WJ, Sivagnanam M, Raffatellu M, Pride D, Dorrestein PC, Zengler K, Choudhury B, Knight R, Chu H. PMID: 38948766; PMCID: PMC11213024.
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Analytical challenges in omics research on asthma and allergy: A National Institute of Allergy and Infectious Diseases workshop. J Allergy Clin Immunol. 2024 Apr; 153(4):954-968.
Bunyavanich S, Becker PM, Altman MC, Lasky-Su J, Ober C, Zengler K, Berdyshev E, Bonneau R, Chatila T, Chatterjee N, Chung KF, Cutcliffe C, Davidson W, Dong G, Fang G, Fulkerson P, Himes BE, Liang L, Mathias RA, Ogino S, Petrosino J, Price ND, Schadt E, Schofield J, Seibold MA, Steen H, Wheatley L, Zhang H, Togias A, Hasegawa K. PMID: 38295882; PMCID: PMC10999353.
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PubMed Mentions: Fields:
Translation:
Humans
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Biocontrol in built environments to reduce pathogen exposure and infection risk. ISME J. 2024 Jan 08; 18(1).
Gottel NR, Hill MS, Neal MJ, Allard SM, Zengler K, Gilbert JA. PMID: 38365248; PMCID: PMC10848226.
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PubMed Mentions:
1 Fields:
Translation:
HumansCells
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Genome-scale metabolic modeling of the human gut bacterium Bacteroides fragilis strain 638R. PLoS Comput Biol. 2023 Oct; 19(10):e1011594.
Neal M, Thiruppathy D, Zengler K. PMID: 37903176; PMCID: PMC10635569.
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PubMed Mentions:
1 Fields:
Translation:
HumansCells
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Metabolic engineering of Synechococcus elongatus 7942 for enhanced sucrose biosynthesis. Metab Eng. 2023 Nov; 80:12-24.
Wang B, Zuniga C, Guarnieri MT, Zengler K, Betenbaugh M, Young JD. PMID: 37678664.
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PubMed Mentions: Fields:
Translation:
Cells
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The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions. PLoS Comput Biol. 2023 08; 19(8):e1011371.
Tec-Campos D, Posadas C, Tibocha-Bonilla JD, Thiruppathy D, Glonek N, Zuñiga C, Zepeda A, Zengler K. PMID: 37556472; PMCID: PMC10441798.
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PubMed Mentions:
1 Fields:
Translation:
Cells
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Guild and Niche Determination Enable Targeted Alteration of the Microbiome. bioRxiv. 2023 May 11.
Moyne O, Al-Bassam M, Lieng C, Thiruppathy D, Norton GJ, Kumar M, Haddad E, Zaramela LS, Zengler K. PMID: 37214910; PMCID: PMC10197622.
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PubMed Mentions:
1
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Optimization of nutrient utilization efficiency and productivity for algal cultures under light and dark cycles using genome-scale model process control. NPJ Syst Biol Appl. 2023 03 15; 9(1):7.
Li CT, Eng R, Zuniga C, Huang KW, Chen Y, Zengler K, Betenbaugh MJ. PMID: 36922521; PMCID: PMC10017758.
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PubMed Mentions: Fields:
Translation:
Animals
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Determination of the Chromatin Openness in Bacterial Genomes. Methods Mol Biol. 2023; 2611:63-69.
Al-Bassam MM, Zengler K. PMID: 36807064.
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PubMed Mentions: Fields:
Translation:
Cells
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Predicting stress response and improved protein overproduction in Bacillus subtilis. NPJ Syst Biol Appl. 2022 12 27; 8(1):50.
Tibocha-Bonilla JD, Zuñiga C, Lekbua A, Lloyd C, Rychel K, Short K, Zengler K. PMID: 36575180; PMCID: PMC9794813.
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PubMed Mentions:
2 Fields:
Translation:
Cells
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A Reproducible and Tunable Synthetic Soil Microbial Community Provides New Insights into Microbial Ecology. mSystems. 2022 12 20; 7(6):e0095122.
Coker J, Zhalnina K, Marotz C, Thiruppathy D, Tjuanta M, D'Elia G, Hailu R, Mahosky T, Rowan M, Northen TR, Zengler K. PMID: 36472419; PMCID: PMC9765266.
View in:
PubMed Mentions:
5 Fields:
Translation:
AnimalsPHPublic Health
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ChiMera: an easy to use pipeline for bacterial genome based metabolic network reconstruction, evaluation and visualization. BMC Bioinformatics. 2022 Nov 30; 23(1):512.
Tamasco G, Kumar M, Zengler K, Silva-Rocha R, da Silva RR. PMID: 36451100; PMCID: PMC9710178.
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PubMed Mentions:
3 Fields:
Translation:
Cells
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synDNA-a Synthetic DNA Spike-in Method for Absolute Quantification of Shotgun Metagenomic Sequencing. mSystems. 2022 12 20; 7(6):e0044722.
Zaramela LS, Tjuanta M, Moyne O, Neal M, Zengler K. PMID: 36317886; PMCID: PMC9765022.
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PubMed Mentions:
6 Fields:
Translation:
Cells
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Zebra: Static and Dynamic Genome Cover Thresholds with Overlapping References. mSystems. 2022 10 26; 7(5):e0075822.
Hakim D, Wandro S, Zengler K, Zaramela LS, Nowinski B, Swafford A, Zhu Q, Song SJ, Gonzalez A, McDonald D, Knight R. PMID: 36073806; PMCID: PMC9600373.
View in:
PubMed Mentions:
2 Fields:
Translation:
HumansCells
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Acetate reprograms gut microbiota during alcohol consumption. Nat Commun. 2022 08 08; 13(1):4630.
Martino C, Zaramela LS, Gao B, Embree M, Tarasova J, Parker SJ, Wang Y, Chu H, Chen P, Lee KC, Galzerani DD, Gengatharan JM, Lekbua A, Neal M, Knight R, Tsukamoto H, Metallo CM, Schnabl B, Zengler K. PMID: 35941112; PMCID: PMC9359997.
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PubMed Mentions:
28 Fields:
Translation:
Animals
-
The Ubiquitous Human Skin Commensal Staphylococcus hominis Protects against Opportunistic Pathogens. mBio. 2022 06 28; 13(3):e0093022.
Severn MM, Williams MR, Shahbandi A, Bunch ZL, Lyon LM, Nguyen A, Zaramela LS, Todd DA, Zengler K, Cech NB, Gallo RL, Horswill AR. PMID: 35608301; PMCID: PMC9239047.
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PubMed Mentions:
20 Fields:
Translation:
HumansAnimalsCells
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Flux balance analysis of the ammonia-oxidizing bacterium Nitrosomonas europaea ATCC19718 unravels specific metabolic activities while degrading toxic compounds. PLoS Comput Biol. 2022 02; 18(2):e1009828.
Canto-Encalada G, Tec-Campos D, Tibocha-Bonilla JD, Zengler K, Zepeda A, Zuñiga C. PMID: 35108266; PMCID: PMC8853641.
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PubMed Mentions:
2 Fields:
Translation:
Cells
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Linking anaerobic gut bacteria and cardiovascular disease. Nat Microbiol. 2022 01; 7(1):14-15.
Coker J, Zaramela LS, Zengler K. PMID: 34949825.
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PubMed Mentions:
1 Fields:
Translation:
HumansCells
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Genome-Scale Metabolic Modeling Enables In-Depth Understanding of Big Data. Metabolites. 2021 Dec 24; 12(1).
Passi A, Tibocha-Bonilla JD, Kumar M, Tec-Campos D, Zengler K, Zuniga C. PMID: 35050136; PMCID: PMC8778254.
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PubMed Mentions:
26
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Dietary Neu5Ac Intervention Protects Against Atherosclerosis Associated With Human-Like Neu5Gc Loss-Brief Report. Arterioscler Thromb Vasc Biol. 2021 11; 41(11):2730-2739.
Kawanishi K, Coker JK, Grunddal KV, Dhar C, Hsiao J, Zengler K, Varki N, Varki A, Gordts PLSM. PMID: 34587757; PMCID: PMC8551057.
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PubMed Mentions:
7 Fields:
Translation:
HumansAnimalsCells
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Biotechnology for secure biocontainment designs in an emerging bioeconomy. Curr Opin Biotechnol. 2021 10; 71:25-31.
Arnolds KL, Dahlin LR, Ding L, Wu C, Yu J, Xiong W, Zuniga C, Suzuki Y, Zengler K, Linger JG, Guarnieri MT. PMID: 34091124.
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PubMed Mentions:
9 Fields:
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The Prolyl-tRNA Synthetase Inhibitor Halofuginone Inhibits SARS-CoV-2 Infection. bioRxiv. 2021 Mar 26.
Sandoval DR, Clausen TM, Nora C, Cribbs AP, Denardo A, Clark AE, Garretson AF, Coker JKC, Narayanan A, Majowicz SA, Philpott M, Johansson C, Dunford JE, Spliid CB, Golden GJ, Payne NC, Tye MA, Nowell CJ, Griffis ER, Piermatteo A, Grunddal KV, Alle T, Magida JA, Hauser BM, Feldman J, Caradonna TM, Pu Y, Yin X, McVicar RN, Kwong EM, Weiss RJ, Downes M, Tsimikas S, Smidt AG, Ballatore C, Zengler K, Evans RM, Chanda SK, Croker BA, Leibel SL, Jose J, Mazitschek R, Oppermann U, Esko JD, Carlin AF, Gordts PLSM. PMID: 33791697; PMCID: PMC8010724.
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PubMed Mentions:
3
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Intestinal α1-2-Fucosylation Contributes to Obesity and Steatohepatitis in Mice. Cell Mol Gastroenterol Hepatol. 2021; 12(1):293-320.
Zhou R, Llorente C, Cao J, Zaramela LS, Zeng S, Gao B, Li SZ, Welch RD, Huang FQ, Qi LW, Pan C, Huang Y, Zhou P, Beussen I, Zhang Y, Bryam G, Fiehn O, Wang L, Liu EH, Yu RT, Downes M, Evans RM, Goglin K, Fouts DE, Brenner DA, Bode L, Fan X, Zengler K, Schnabl B. PMID: 33631374; PMCID: PMC8166943.
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PubMed Mentions:
13 Fields:
Translation:
Animals
-
Quantifying Live Microbial Load in Human Saliva Samples over Time Reveals Stable Composition and Dynamic Load. mSystems. 2021 Feb 16; 6(1).
Marotz C, Morton JT, Navarro P, Coker J, Belda-Ferre P, Knight R, Zengler K. PMID: 33594005; PMCID: PMC8561659.
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PubMed Mentions:
11 Fields:
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The sum is greater than the parts: exploiting microbial communities to achieve complex functions. Curr Opin Biotechnol. 2021 02; 67:149-157.
Zaramela LS, Moyne O, Kumar M, Zuniga C, Tibocha-Bonilla JD, Zengler K. PMID: 33561703.
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PubMed Mentions:
13 Fields:
Translation:
HumansAnimals
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Microbiome Signatures in a Fast- and Slow-Progressing Gastric Cancer Murine Model and Their Contribution to Gastric Carcinogenesis. Microorganisms. 2021 Jan 17; 9(1).
Bali P, Coker J, Lozano-Pope I, Zengler K, Obonyo M. PMID: 33477306; PMCID: PMC7829848.
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PubMed Mentions:
7
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Host DNA Depletion in Saliva Samples for Improved Shotgun Metagenomics. Methods Mol Biol. 2021; 2327:87-92.
Marotz C, Zuniga C, Zaramela L, Knight R, Zengler K. PMID: 34410641.
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PubMed Mentions: Fields:
Translation:
Humans
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Carbohydrates great and small, from dietary fiber to sialic acids: How glycans influence the gut microbiome and affect human health. Gut Microbes. 2021 Jan-Dec; 13(1):1-18.
Coker JK, Moyne O, Rodionov DA, Zengler K. PMID: 33615984; PMCID: PMC7899658.
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PubMed Mentions:
23 Fields:
Translation:
HumansAnimalsCells
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Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems. mSystems. 2020 Oct 20; 5(5).
Allard SM, Costa MT, Bulseco AN, Helfer V, Wilkins LGE, Hassenrück C, Zengler K, Zimmer M, Erazo N, Mazza Rodrigues JL, Duke N, Melo VMM, Vanwonterghem I, Junca H, Makonde HM, Jiménez DJ, Tavares TCL, Fusi M, Daffonchio D, Duarte CM, Peixoto RS, Rosado AS, Gilbert JA, Bowman J. PMID: 33082281; PMCID: PMC7577295.
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PubMed Mentions:
12 Fields:
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Bacterial modification of the host glycosaminoglycan heparan sulfate modulates SARS-CoV-2 infectivity. bioRxiv. 2020 Aug 18.
Martino C, Kellman BP, Sandoval DR, Clausen TM, Marotz CA, Song SJ, Wandro S, Zaramela LS, Salido Benítez RA, Zhu Q, Armingol E, Vázquez-Baeza Y, McDonald D, Sorrentino JT, Taylor B, Belda-Ferre P, Liang C, Zhang Y, Schifanella L, Klatt NR, Havulinna AS, Jousilahti P, Huang S, Haiminen N, Parida L, Kim HC, Swafford AD, Zengler K, Cheng S, Inouye M, Niiranen T, Jain M, Salomaa V, Esko JD, Lewis NE, Knight R. PMID: 32839779; PMCID: PMC7444296.
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PubMed Mentions:
1
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Linking metabolic phenotypes to pathogenic traits among "Candidatus Liberibacter asiaticus" and its hosts. NPJ Syst Biol Appl. 2020 08 04; 6(1):24.
Zuñiga C, Peacock B, Liang B, McCollum G, Irigoyen SC, Tec-Campos D, Marotz C, Weng NC, Zepeda A, Vidalakis G, Mandadi KK, Borneman J, Zengler K. PMID: 32753656; PMCID: PMC7403731.
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PubMed Mentions:
11 Fields:
Translation:
AnimalsCells
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Synthetic microbial communities of heterotrophs and phototrophs facilitate sustainable growth. Nat Commun. 2020 07 30; 11(1):3803.
Zuñiga C, Li T, Guarnieri MT, Jenkins JP, Li CT, Bingol K, Kim YM, Betenbaugh MJ, Zengler K. PMID: 32732991; PMCID: PMC7393147.
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PubMed Mentions:
19 Fields:
Translation:
AnimalsCells
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Modeling of nitrogen fixation and polymer production in the heterotrophic diazotroph Azotobacter vinelandii DJ. Metab Eng Commun. 2020 Dec; 11:e00132.
Campos DT, Zuñiga C, Passi A, Del Toro J, Tibocha-Bonilla JD, Zepeda A, Betenbaugh MJ, Zengler K. PMID: 32551229; PMCID: PMC7292883.
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PubMed Mentions:
10
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Transcriptional profiling of lung macrophages identifies a predictive signature for inflammatory lung disease in preterm infants. Commun Biol. 2020 05 22; 3(1):259.
Sahoo D, Zaramela LS, Hernandez GE, Mai U, Taheri S, Dang D, Stouch AN, Medal RM, McCoy AM, Aschner JL, Blackwell TS, Zengler K, Prince LS. PMID: 32444859; PMCID: PMC7244484.
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PubMed Mentions:
21 Translation:
HumansCells
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Dynamic resource allocation drives growth under nitrogen starvation in eukaryotes. NPJ Syst Biol Appl. 2020 05 15; 6(1):14.
Tibocha-Bonilla JD, Kumar M, Richelle A, Godoy-Silva RD, Zengler K, Zuñiga C. PMID: 32415097; PMCID: PMC7229059.
View in:
PubMed Mentions:
7 Fields:
Translation:
AnimalsCells
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Genomic and Transcriptomic Evidence Supports Methane Metabolism in Archaeoglobi. mSystems. 2020 Mar 17; 5(2).
Liu YF, Chen J, Zaramela LS, Wang LY, Mbadinga SM, Hou ZW, Wu XL, Gu JD, Zengler K, Mu BZ. PMID: 32184369; PMCID: PMC7380581.
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PubMed Mentions:
11 Fields:
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Interplay of Staphylococcal and Host Proteases Promotes Skin Barrier Disruption in Netherton Syndrome. Cell Rep. 2020 03 03; 30(9):2923-2933.e7.
Williams MR, Cau L, Wang Y, Kaul D, Sanford JA, Zaramela LS, Khalil S, Butcher AM, Zengler K, Horswill AR, Dupont CL, Hovnanian A, Gallo RL. PMID: 32130897; PMCID: PMC7183042.
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PubMed Mentions:
37 Fields:
Translation:
HumansAnimalsCells
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Blockade of IL-17 signaling reverses alcohol-induced liver injury and excessive alcohol drinking in mice. JCI Insight. 2020 02 13; 5(3).
Xu J, Ma HY, Liu X, Rosenthal S, Baglieri J, McCubbin R, Sun M, Koyama Y, Geoffroy CG, Saijo K, Shang L, Nishio T, Maricic I, Kreifeldt M, Kusumanchi P, Roberts A, Zheng B, Kumar V, Zengler K, Pizzo DP, Hosseini M, Contet C, Glass CK, Liangpunsakul S, Tsukamoto H, Gao B, Karin M, Brenner DA, Koob GF, Kisseleva T. PMID: 32051339; PMCID: PMC7098802.
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PubMed Mentions:
15 Fields:
Translation:
HumansAnimalsCells
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Author Correction: Environmental stimuli drive a transition from cooperation to competition in synthetic phototrophic communities. Nat Microbiol. 2019 Dec; 4(12):2578.
Zuñiga C, Li CT, Yu G, Al-Bassam MM, Li T, Jiang L, Zaramela LS, Guarnieri M, Betenbaugh MJ, Zengler K. PMID: 31690826.
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PubMed Mentions:
1 Fields:
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Environmental stimuli drive a transition from cooperation to competition in synthetic phototrophic communities. Nat Microbiol. 2019 12; 4(12):2184-2191.
Zuñiga C, Li CT, Yu G, Al-Bassam MM, Li T, Jiang L, Zaramela LS, Guarnieri M, Betenbaugh MJ, Zengler K. PMID: 31591554.
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PubMed Mentions:
27 Fields:
Translation:
AnimalsCellsPHPublic Health
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Utilizing genome-scale models to optimize nutrient supply for sustained algal growth and lipid productivity. NPJ Syst Biol Appl. 2019; 5:33.
Li CT, Yelsky J, Chen Y, Zuñiga C, Eng R, Jiang L, Shapiro A, Huang KW, Zengler K, Betenbaugh MJ. PMID: 31583115; PMCID: PMC6760154.
View in:
PubMed Mentions:
8 Fields:
Translation:
AnimalsCells
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Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates. Nat Microbiol. 2019 12; 4(12):2082-2089.
Zaramela LS, Martino C, Alisson-Silva F, Rees SD, Diaz SL, Chuzel L, Ganatra MB, Taron CH, Secrest P, Zuñiga C, Huang J, Siegel D, Chang G, Varki A, Zengler K. PMID: 31548686; PMCID: PMC6879853.
View in:
PubMed Mentions:
30 Fields:
Translation:
HumansAnimalsCells
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Functional and Proteomic Analysis of Streptococcus pyogenes Virulence Upon Loss of Its Native Cas9 Nuclease. Front Microbiol. 2019; 10:1967.
Gao NJ, Al-Bassam MM, Poudel S, Wozniak JM, Gonzalez DJ, Olson J, Zengler K, Nizet V, Valderrama JA. PMID: 31507572; PMCID: PMC6714885.
View in:
PubMed Mentions:
8
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Modelling approaches for studying the microbiome. Nat Microbiol. 2019 08; 4(8):1253-1267.
Kumar M, Ji B, Zengler K, Nielsen J. PMID: 31337891.
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PubMed Mentions:
57 Fields:
Translation:
HumansCells
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems. Nat Methods. 2019 07; 16(7):567-571.
Zengler K, Hofmockel K, Baliga NS, Behie SW, Bernstein HC, Brown JB, Dinneny JR, Floge SA, Forry SP, Hess M, Jackson SA, Jansson C, Lindemann SR, Pett-Ridge J, Maranas C, Venturelli OS, Wallenstein MD, Shank EA, Northen TR. PMID: 31227812; PMCID: PMC6733021.
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PubMed Mentions:
43 Fields:
Translation:
HumansAnimals
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Establishing microbial composition measurement standards with reference frames. Nat Commun. 2019 06 20; 10(1):2719.
Morton JT, Marotz C, Washburne A, Silverman J, Zaramela LS, Edlund A, Zengler K, Knight R. PMID: 31222023; PMCID: PMC6586903.
View in:
PubMed Mentions:
259 Fields:
Translation:
HumansCellsPHPublic Health
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The impact of skin care products on skin chemistry and microbiome dynamics. BMC Biol. 2019 06 12; 17(1):47.
Bouslimani A, da Silva R, Kosciolek T, Janssen S, Callewaert C, Amir A, Dorrestein K, Melnik AV, Zaramela LS, Kim JN, Humphrey G, Schwartz T, Sanders K, Brennan C, Luzzatto-Knaan T, Ackermann G, McDonald D, Zengler K, Knight R, Dorrestein PC. PMID: 31189482; PMCID: PMC6560912.
View in:
PubMed Mentions:
56 Fields:
Translation:
Humans
-
Quorum sensing between bacterial species on the skin protects against epidermal injury in atopic dermatitis. Sci Transl Med. 2019 05 01; 11(490).
Williams MR, Costa SK, Zaramela LS, Khalil S, Todd DA, Winter HL, Sanford JA, O'Neill AM, Liggins MC, Nakatsuji T, Cech NB, Cheung AL, Zengler K, Horswill AR, Gallo RL. PMID: 31043573; PMCID: PMC7106486.
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PubMed Mentions:
99 Fields:
Translation:
HumansAnimalsCells
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Mast cell recruitment is modulated by the hairless skin microbiome. J Allergy Clin Immunol. 2019 07; 144(1):330-333.e6.
Wu CC, Kim JN, Wang Z, Chang YL, Zengler K, Di Nardo A. PMID: 30928651; PMCID: PMC7680643.
View in:
PubMed Mentions:
3 Fields:
Translation:
AnimalsCells
-
Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen. PLoS Comput Biol. 2019 03; 15(3):e1006848.
Liu JK, Lloyd C, Al-Bassam MM, Ebrahim A, Kim JN, Olson C, Aksenov A, Dorrestein P, Zengler K. PMID: 30845144; PMCID: PMC6430413.
View in:
PubMed Mentions:
22 Fields:
Translation:
Cells
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The nonlesional skin surface distinguishes atopic dermatitis with food allergy as a unique endotype. Sci Transl Med. 2019 02 20; 11(480).
Leung DYM, Calatroni A, Zaramela LS, LeBeau PK, Dyjack N, Brar K, David G, Johnson K, Leung S, Ramirez-Gama M, Liang B, Rios C, Montgomery MT, Richers BN, Hall CF, Norquest KA, Jung J, Bronova I, Kreimer S, Talbot CC, Crumrine D, Cole RN, Elias P, Zengler K, Seibold MA, Berdyshev E, Goleva E. PMID: 30787169; PMCID: PMC7676854.
View in:
PubMed Mentions:
76 Fields:
Translation:
HumansCells
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A Novel Sparse Compositional Technique Reveals Microbial Perturbations. mSystems. 2019 Jan-Feb; 4(1).
Martino C, Morton JT, Marotz CA, Thompson LR, Tripathi A, Knight R, Zengler K. PMID: 30801021; PMCID: PMC6372836.
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PubMed Mentions:
166 Fields:
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Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment. Sci Rep. 2019 02 04; 9(1):1239.
Shin B, Kim M, Zengler K, Chin KJ, Overholt WA, Gieg LM, Konstantinidis KT, Kostka JE. PMID: 30718896; PMCID: PMC6361983.
View in:
PubMed Mentions:
12 Fields:
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A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types. PLoS Comput Biol. 2019 01; 15(1):e1006644.
Seif Y, Monk JM, Mih N, Tsunemoto H, Poudel S, Zuniga C, Broddrick J, Zengler K, Palsson BO. PMID: 30625152; PMCID: PMC6326480.
View in:
PubMed Mentions:
20 Fields:
Translation:
Cells
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GABA-modulating bacteria of the human gut microbiota. Nat Microbiol. 2019 03; 4(3):396-403.
Strandwitz P, Kim KH, Terekhova D, Liu JK, Sharma A, Levering J, McDonald D, Dietrich D, Ramadhar TR, Lekbua A, Mroue N, Liston C, Stewart EJ, Dubin MJ, Zengler K, Knight R, Gilbert JA, Clardy J, Lewis K. PMID: 30531975; PMCID: PMC6384127.
View in:
PubMed Mentions:
359 Fields:
Translation:
HumansCells
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Optimization of carbon and energy utilization through differential translational efficiency. Nat Commun. 2018 10 26; 9(1):4474.
Al-Bassam MM, Kim JN, Zaramela LS, Kellman BP, Zuniga C, Wozniak JM, Gonzalez DJ, Zengler K. PMID: 30367068; PMCID: PMC6203783.
View in:
PubMed Mentions:
13 Fields:
Translation:
Cells
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Group B Streptococcus Biofilm Regulatory Protein A Contributes to Bacterial Physiology and Innate Immune Resistance. J Infect Dis. 2018 10 05; 218(10):1641-1652.
Patras KA, Derieux J, Al-Bassam MM, Adiletta N, Vrbanac A, Lapek JD, Zengler K, Gonzalez DJ, Nizet V. PMID: 29868829; PMCID: PMC6173572.
View in:
PubMed Mentions:
22 Fields:
Translation:
HumansAnimalsCells
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Advances in metabolic modeling of oleaginous microalgae. Biotechnol Biofuels. 2018; 11:241.
Tibocha-Bonilla JD, Zuñiga C, Godoy-Silva RD, Zengler K. PMID: 30202436; PMCID: PMC6124020.
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PubMed Mentions:
13
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Need for Laboratory Ecosystems To Unravel the Structures and Functions of Soil Microbial Communities Mediated by Chemistry. mBio. 2018 07 17; 9(4).
Zhalnina K, Zengler K, Newman D, Northen TR. PMID: 30018110; PMCID: PMC6050955.
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PubMed Mentions:
16 Fields:
Translation:
PHPublic Health
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The social network of microorganisms - how auxotrophies shape complex communities. Nat Rev Microbiol. 2018 06; 16(6):383-390.
Zengler K, Zaramela LS. PMID: 29599459; PMCID: PMC6059367.
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PubMed Mentions:
142 Fields:
Translation:
Cells
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ChIP-exo interrogation of Crp, DNA, and RNAP holoenzyme interactions. PLoS One. 2018; 13(5):e0197272.
Latif H, Federowicz S, Ebrahim A, Tarasova J, Szubin R, Utrilla J, Zengler K, Palsson BO. PMID: 29771928; PMCID: PMC5957442.
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PubMed Mentions:
13 Fields:
Translation:
Cells
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Genome Sequence of the Oleaginous Green Alga, Chlorella vulgaris UTEX 395. Front Bioeng Biotechnol. 2018; 6:37.
Guarnieri MT, Levering J, Henard CA, Boore JL, Betenbaugh MJ, Zengler K, Knoshaug EP. PMID: 29675409; PMCID: PMC5895722.
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PubMed Mentions:
10
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The Role of Intestinal C-type Regenerating Islet Derived-3 Lectins for Nonalcoholic Steatohepatitis. Hepatol Commun. 2018 04; 2(4):393-406.
Bluemel S, Wang L, Martino C, Lee S, Wang Y, Williams B, Horvath A, Stadlbauer V, Zengler K, Schnabl B. PMID: 29619418; PMCID: PMC5880191.
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PubMed Mentions:
22 Fields:
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Improving saliva shotgun metagenomics by chemical host DNA depletion. Microbiome. 2018 02 27; 6(1):42.
Marotz CA, Sanders JG, Zuniga C, Zaramela LS, Knight R, Zengler K. PMID: 29482639; PMCID: PMC5827986.
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PubMed Mentions:
143 Fields:
Translation:
HumansAnimalsCells
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Metabolic capability and in situ activity of microorganisms in an oil reservoir. Microbiome. 2018 01 05; 6(1):5.
Liu YF, Galzerani DD, Mbadinga SM, Zaramela LS, Gu JD, Mu BZ, Zengler K. PMID: 29304850; PMCID: PMC5756336.
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PubMed Mentions:
24 Fields:
Translation:
Cells
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Predicting Dynamic Metabolic Demands in the Photosynthetic Eukaryote Chlorella vulgaris. Plant Physiol. 2018 01; 176(1):450-462.
Zuñiga C, Levering J, Antoniewicz MR, Guarnieri MT, Betenbaugh MJ, Zengler K. PMID: 28951490; PMCID: PMC5761767.
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PubMed Mentions:
24 Fields:
Translation:
AnimalsCells
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Elucidation of complexity and prediction of interactions in microbial communities. Microb Biotechnol. 2017 11; 10(6):1500-1522.
Zuñiga C, Zaramela L, Zengler K. PMID: 28925555; PMCID: PMC5658597.
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PubMed Mentions:
50 Fields:
Translation:
HumansAnimalsCells
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Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments. Nat Commun. 2017 06 05; 8:15595.
Wankel SD, Ziebis W, Buchwald C, Charoenpong C, de Beer D, Dentinger J, Xu Z, Zengler K. PMID: 28580932; PMCID: PMC5465357.
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PubMed Mentions:
17 Fields:
Translation:
AnimalsCells
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Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis. Sci Transl Med. 2017 02 22; 9(378).
Nakatsuji T, Chen TH, Narala S, Chun KA, Two AM, Yun T, Shafiq F, Kotol PF, Bouslimani A, Melnik AV, Latif H, Kim JN, Lockhart A, Artis K, David G, Taylor P, Streib J, Dorrestein PC, Grier A, Gill SR, Zengler K, Hata TR, Leung DY, Gallo RL. PMID: 28228596; PMCID: PMC5600545.
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Integrated Regulatory and Metabolic Networks of the Marine Diatom Phaeodactylum tricornutum Predict the Response to Rising CO2 Levels. mSystems. 2017 Jan-Feb; 2(1).
Levering J, Dupont CL, Allen AE, Palsson BO, Zengler K. PMID: 28217746; PMCID: PMC5309336.
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PubMed Mentions:
16 Fields:
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FRT - FONDATION RENE TOURAINE: An International Foundation For Dermatology. Exp Dermatol. 2016 11; 25(11):917-932.
Bosch TC, Zengler K, Naik S, Biedermann T, Kong HH, Loser K, Brüggeman H, Calleawert C, Lambert J, Van de Wiele T. PMID: 27792248.
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PubMed Mentions: Fields:
Translation:
Humans
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Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions. Plant Physiol. 2016 09; 172(1):589-602.
Zuñiga C, Li CT, Huelsman T, Levering J, Zielinski DC, McConnell BO, Long CP, Knoshaug EP, Guarnieri MT, Antoniewicz MR, Betenbaugh MJ, Zengler K. PMID: 27372244; PMCID: PMC5074608.
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PubMed Mentions:
31 Fields:
Translation:
AnimalsCells
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Efficient Synergistic Single-Cell Genome Assembly. Front Bioeng Biotechnol. 2016; 4:42.
Movahedi NS, Embree M, Nagarajan H, Zengler K, Chitsaz H. PMID: 27243002; PMCID: PMC4876485.
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PubMed Mentions:
1
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Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom. PLoS One. 2016; 11(5):e0155038.
Levering J, Broddrick J, Dupont CL, Peers G, Beeri K, Mayers J, Gallina AA, Allen AE, Palsson BO, Zengler K. PMID: 27152931; PMCID: PMC4859558.
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PubMed Mentions:
42 Fields:
Translation:
AnimalsCells
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Networks of energetic and metabolic interactions define dynamics in microbial communities. Proc Natl Acad Sci U S A. 2015 Dec 15; 112(50):15450-5.
Embree M, Liu JK, Al-Bassam MM, Zengler K. PMID: 26621749; PMCID: PMC4687543.
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PubMed Mentions:
89 Fields:
Translation:
Cells
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Engineering of oleaginous organisms for lipid production. Curr Opin Biotechnol. 2015 Dec; 36:32-9.
Levering J, Broddrick J, Zengler K. PMID: 26319892.
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PubMed Mentions:
19 Fields:
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Investigating Moorella thermoacetica metabolism with a genome-scale constraint-based metabolic model. Integr Biol (Camb). 2015 Aug; 7(8):869-82.
Islam MA, Zengler K, Edwards EA, Mahadevan R, Stephanopoulos G. PMID: 25994252.
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PubMed Mentions:
11 Fields:
Translation:
Cells
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Adaptive Evolution of Thermotoga maritima Reveals Plasticity of the ABC Transporter Network. Appl Environ Microbiol. 2015 Aug 15; 81(16):5477-85.
Latif H, Sahin M, Tarasova J, Tarasova Y, Portnoy VA, Nogales J, Zengler K. PMID: 26048924; PMCID: PMC4510162.
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PubMed Mentions:
8 Fields:
Translation:
Cells
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A streamlined ribosome profiling protocol for the characterization of microorganisms. Biotechniques. 2015 Jun; 58(6):329-32.
Latif H, Szubin R, Tan J, Brunk E, Lechner A, Zengler K, Palsson BO. PMID: 26054770.
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PubMed Mentions:
24 Fields:
Translation:
Cells
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Unraveling interactions in microbial communities - from co-cultures to microbiomes. J Microbiol. 2015 May; 53(5):295-305.
Tan J, Zuniga C, Zengler K. PMID: 25935300.
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PubMed Mentions:
26 Fields:
Translation:
HumansCells
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A logical data representation framework for electricity-driven bioproduction processes. Biotechnol Adv. 2015 Nov 01; 33(6 Pt 1):736-44.
Patil SA, Gildemyn S, Pant D, Zengler K, Logan BE, Rabaey K. PMID: 25765230.
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PubMed Mentions:
21 Fields:
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Reconstruction and modeling protein translocation and compartmentalization in Escherichia coli at the genome-scale. BMC Syst Biol. 2014 Sep 18; 8:110.
Liu JK, O'Brien EJ, Lerman JA, Zengler K, Palsson BO, Feist AM. PMID: 25227965; PMCID: PMC4177180.
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PubMed Mentions:
46 Fields:
Translation:
Cells
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Supplementation of saturated long-chain fatty acids maintains intestinal eubiosis and reduces ethanol-induced liver injury in mice. Gastroenterology. 2015 Jan; 148(1):203-214.e16.
Chen P, Torralba M, Tan J, Embree M, Zengler K, Stärkel P, van Pijkeren JP, DePew J, Loomba R, Ho SB, Bajaj JS, Mutlu EA, Keshavarzian A, Tsukamoto H, Nelson KE, Fouts DE, Schnabl B. PMID: 25239591; PMCID: PMC4274236.
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PubMed Mentions:
157 Fields:
Translation:
AnimalsCells
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Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. PLoS Comput Biol. 2014 Apr; 10(4):e1003575.
Feist AM, Nagarajan H, Rotaru AE, Tremblay PL, Zhang T, Nevin KP, Lovley DR, Zengler K. PMID: 24762737; PMCID: PMC3998878.
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PubMed Mentions:
17 Fields:
Translation:
Cells
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Determining the control circuitry of redox metabolism at the genome-scale. PLoS Genet. 2014 Apr; 10(4):e1004264.
Federowicz S, Kim D, Ebrahim A, Lerman J, Nagarajan H, Cho BK, Zengler K, Palsson B. PMID: 24699140; PMCID: PMC3974632.
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PubMed Mentions:
37 Fields:
Translation:
Cells
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The iron stimulon and fur regulon of Geobacter sulfurreducens and their role in energy metabolism. Appl Environ Microbiol. 2014 May; 80(9):2918-27.
Embree M, Qiu Y, Shieu W, Nagarajan H, O'Neil R, Lovley D, Zengler K. PMID: 24584254; PMCID: PMC3993298.
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PubMed Mentions:
14 Fields:
Translation:
Cells
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Genome-scale reconstruction of the sigma factor network in Escherichia coli: topology and functional states. BMC Biol. 2014 Jan 24; 12:4.
Cho BK, Kim D, Knight EM, Zengler K, Palsson BO. PMID: 24461193; PMCID: PMC3923258.
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PubMed Mentions:
62 Fields:
Translation:
Cells
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Trash to treasure: production of biofuels and commodity chemicals via syngas fermenting microorganisms. Curr Opin Biotechnol. 2014 Jun; 27:79-87.
Latif H, Zeidan AA, Nielsen AT, Zengler K. PMID: 24863900.
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PubMed Mentions:
41 Fields:
Translation:
Cells
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Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii. Microb Cell Fact. 2013 Nov 25; 12:118.
Nagarajan H, Sahin M, Nogales J, Latif H, Lovley DR, Ebrahim A, Zengler K. PMID: 24274140; PMCID: PMC4222884.
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PubMed Mentions:
56 Fields:
Translation:
Cells
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Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community. ISME J. 2014 Apr; 8(4):757-67.
Embree M, Nagarajan H, Movahedi N, Chitsaz H, Zengler K. PMID: 24152715; PMCID: PMC3960532.
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PubMed Mentions:
54 Fields:
Translation:
Cells
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Transcriptional regulation of the carbohydrate utilization network in Thermotoga maritima. Front Microbiol. 2013; 4:244.
Rodionov DA, Rodionova IA, Li X, Ravcheev DA, Tarasova Y, Portnoy VA, Zengler K, Osterman AL. PMID: 23986752; PMCID: PMC3750489.
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PubMed Mentions:
29
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The genome organization of Thermotoga maritima reflects its lifestyle. PLoS Genet. 2013 Apr; 9(4):e1003485.
Latif H, Lerman JA, Portnoy VA, Tarasova Y, Nagarajan H, Schrimpe-Rutledge AC, Smith RD, Adkins JN, Lee DH, Qiu Y, Zengler K. PMID: 23637642; PMCID: PMC3636130.
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PubMed Mentions:
17 Fields:
Translation:
Cells
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Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks. Nat Commun. 2013; 4:1755.
Qiu Y, Nagarajan H, Embree M, Shieu W, Abate E, Juárez K, Cho BK, Elkins JG, Nevin KP, Barrett CL, Lovley DR, Palsson BO, Zengler K. PMID: 23612296.
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PubMed Mentions:
9 Fields:
Translation:
Cells
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Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association. Nat Commun. 2013; 4:2809.
Nagarajan H, Embree M, Rotaru AE, Shrestha PM, Feist AM, Palsson BØ, Lovley DR, Zengler K. PMID: 24264237.
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PubMed Mentions:
30 Fields:
Translation:
Cells
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The microbiome extends to subepidermal compartments of normal skin. Nat Commun. 2013; 4:1431.
Nakatsuji T, Chiang HI, Jiang SB, Nagarajan H, Zengler K, Gallo RL. PMID: 23385576; PMCID: PMC3655727.
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PubMed Mentions:
185 Fields:
Translation:
HumansCells
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Sulfide-driven microbial electrosynthesis. Environ Sci Technol. 2013 Jan 02; 47(1):568-73.
Gong Y, Ebrahim A, Feist AM, Embree M, Zhang T, Lovley D, Zengler K. PMID: 23252645.
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PubMed Mentions:
15 Fields:
Translation:
Cells
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Anaerobic utilization of toluene by marine alpha- and gammaproteobacteria reducing nitrate. Microbiology (Reading). 2012 Dec; 158(Pt 12):2946-2957.
Alain K, Harder J, Widdel F, Zengler K. PMID: 23038808.
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PubMed Mentions:
12 Fields:
Translation:
Cells
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In silico method for modelling metabolism and gene product expression at genome scale. Nat Commun. 2012 Jul 03; 3:929.
Lerman JA, Hyduke DR, Latif H, Portnoy VA, Lewis NE, Orth JD, Schrimpe-Rutledge AC, Smith RD, Adkins JN, Zengler K, Palsson BO. PMID: 22760628; PMCID: PMC3827721.
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PubMed Mentions:
122 Fields:
Translation:
Cells
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A road map for the development of community systems (CoSy) biology. Nat Rev Microbiol. 2012 03 27; 10(5):366-72.
Zengler K, Palsson BO. PMID: 22450377.
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PubMed Mentions:
68 Fields:
Translation:
PHPublic Health
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Transcriptional regulation of central carbon and energy metabolism in bacteria by redox-responsive repressor Rex. J Bacteriol. 2012 Mar; 194(5):1145-57.
Ravcheev DA, Li X, Latif H, Zengler K, Leyn SA, Korostelev YD, Kazakov AE, Novichkov PS, Osterman AL, Rodionov DA. PMID: 22210771; PMCID: PMC3294762.
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PubMed Mentions:
72 Fields:
Translation:
Cells
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Deciphering the transcriptional regulatory logic of amino acid metabolism. Nat Chem Biol. 2011 Nov 13; 8(1):65-71.
Cho BK, Federowicz S, Park YS, Zengler K, Palsson BØ. PMID: 22082910; PMCID: PMC3777760.
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PubMed Mentions:
51 Fields:
Translation:
Cells
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Deciphering the regulatory codes in bacterial genomes. Biotechnol J. 2011 Sep; 6(9):1052-63.
Cho BK, Palsson B, Zengler K. PMID: 21845736.
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PubMed Mentions:
3 Fields:
Translation:
Cells
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Adaptive laboratory evolution--harnessing the power of biology for metabolic engineering. Curr Opin Biotechnol. 2011 Aug; 22(4):590-4.
Portnoy VA, Bezdan D, Zengler K. PMID: 21497080.
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PubMed Mentions:
81 Fields:
Translation:
AnimalsCells
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A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. BMC Syst Biol. 2011 Jan 18; 5:8.
Thiele I, Hyduke DR, Steeb B, Fankam G, Allen DK, Bazzani S, Charusanti P, Chen FC, Fleming RM, Hsiung CA, De Keersmaecker SC, Liao YC, Marchal K, Mo ML, Özdemir E, Raghunathan A, Reed JL, Shin SI, Sigurbjörnsdóttir S, Steinmann J, Sudarsan S, Swainston N, Thijs IM, Zengler K, Palsson BO, Adkins JN, Bumann D. PMID: 21244678; PMCID: PMC3032673.
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PubMed Mentions:
71 Fields:
Translation:
HumansCells
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A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution. Environ Microbiol. 2011 Jan; 13(1):13-23.
Tremblay PL, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR. PMID: 20636372.
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PubMed Mentions:
30 Fields:
Translation:
CellsPHPublic Health
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The challenges of integrating multi-omic data sets. Nat Chem Biol. 2010 Nov; 6(11):787-9.
Palsson B, Zengler K. PMID: 20976870.
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PubMed Mentions:
74 Fields:
Translation:
Cells
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Structural and operational complexity of the Geobacter sulfurreducens genome. Genome Res. 2010 Sep; 20(9):1304-11.
Qiu Y, Cho BK, Park YS, Lovley D, Palsson BØ, Zengler K. PMID: 20592237; PMCID: PMC2928509.
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PubMed Mentions:
48 Fields:
Translation:
Cells
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Production of pilus-like filaments in Geobacter sulfurreducens in the absence of the type IV pilin protein PilA. FEMS Microbiol Lett. 2010 Sep 01; 310(1):62-8.
Klimes A, Franks AE, Glaven RH, Tran H, Barrett CL, Qiu Y, Zengler K, Lovley DR. PMID: 20629752.
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PubMed Mentions:
12 Fields:
Translation:
Cells
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De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads. PLoS One. 2010 Jun 08; 5(6):e10922.
Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Methé BA, Palsson BØ, Lovley DR, Barrett CL. PMID: 20544019; PMCID: PMC2882325.
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PubMed Mentions:
13 Fields:
Translation:
Cells
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Central role of the cell in microbial ecology. Microbiol Mol Biol Rev. 2009 Dec; 73(4):712-29.
Zengler K. PMID: 19946138; PMCID: PMC2786577.
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PubMed Mentions:
20 Fields:
Translation:
CellsPHPublic Health
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The transcription unit architecture of the Escherichia coli genome. Nat Biotechnol. 2009 Nov; 27(11):1043-9.
Cho BK, Zengler K, Qiu Y, Park YS, Knight EM, Barrett CL, Gao Y, Palsson BØ. PMID: 19881496; PMCID: PMC3832199.
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PubMed Mentions:
156 Fields:
Translation:
Cells
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Targeted access to the genomes of low-abundance organisms in complex microbial communities. Appl Environ Microbiol. 2007 May; 73(10):3205-14.
Podar M, Abulencia CB, Walcher M, Hutchison D, Zengler K, Garcia JA, Holland T, Cotton D, Hauser L, Keller M. PMID: 17369337; PMCID: PMC1907129.
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PubMed Mentions:
96 Fields:
Translation:
CellsPHPublic Health
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Anoxybacillus kamchatkensis sp. nov., a novel thermophilic facultative aerobic bacterium with a broad pH optimum from the Geyser valley, Kamchatka. Extremophiles. 2005 Oct; 9(5):391-8.
Kevbrin VV, Zengler K, Lysenko AM, Wiegel J. PMID: 16142505.
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PubMed Mentions:
15 Fields:
Translation:
Cells
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High-throughput cultivation of microorganisms using microcapsules. Methods Enzymol. 2005; 397:124-30.
Zengler K, Walcher M, Clark G, Haller I, Toledo G, Holland T, Mathur EJ, Woodnutt G, Short JM, Keller M. PMID: 16260288.
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PubMed Mentions:
29 Fields:
Translation:
CellsPHPublic Health
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Tapping into microbial diversity. Nat Rev Microbiol. 2004 Feb; 2(2):141-50.
Keller M, Zengler K. PMID: 15040261.
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PubMed Mentions:
79 Fields:
Translation:
CellsPHPublic Health
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Cultivating the uncultured. Proc Natl Acad Sci U S A. 2002 Nov 26; 99(24):15681-6.
Zengler K, Toledo G, Rappe M, Elkins J, Mathur EJ, Short JM, Keller M. PMID: 12438682; PMCID: PMC137776.
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PubMed Mentions:
223 Fields:
Translation:
CellsPHPublic Health
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Methane formation from long-chain alkanes by anaerobic microorganisms. Nature. 1999 Sep 16; 401(6750):266-9.
Zengler K, Richnow HH, Rosselló-Mora R, Michaelis W, Widdel F. PMID: 10499582.
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PubMed Mentions:
106 Fields:
Translation:
CellsPHPublic Health
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Anaerobic degradation of ethylbenzene and toluene in denitrifying strain EbN1 proceeds via independent substrate-induced pathways. J Mol Microbiol Biotechnol. 1999 Aug; 1(1):157-64.
Champion KM, Zengler K, Rabus R. PMID: 10941798.
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PubMed Mentions:
16 Fields:
Translation:
CellsPHPublic Health
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Anaerobic oxidation of o-xylene, m-xylene, and homologous alkylbenzenes by new types of sulfate-reducing bacteria. Appl Environ Microbiol. 1999 Mar; 65(3):999-1004.
Harms G, Zengler K, Rabus R, Aeckersberg F, Minz D, Rosselló-Mora R, Widdel F. PMID: 10049854; PMCID: PMC91135.
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PubMed Mentions:
29 Fields:
Translation:
CellsPHPublic Health