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Single-cell analysis in hypersaline brines predicts a water-activity limit of microbial anabolic activity. Sci Adv. 2023 Dec 22; 9(51):eadj3594.
Paris ER, Arandia-Gorostidi N, Klempay B, Bowman JS, Pontefract A, Elbon CE, Glass JB, Ingall ED, Doran PT, Som SM, Schmidt BE, Dekas AE. PMID: 38134283; PMCID: PMC10745694.
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Cells
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Depth drives the distribution of microbial ecological functions in the coastal western Antarctic Peninsula. Front Microbiol. 2023; 14:1168507.
Dutta A, Connors E, Trinh R, Erazo N, Dasarathy S, Ducklow HW, Steinberg DK, Schofield OM, Bowman JS. PMID: 37275172; PMCID: PMC10232865.
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Harnessing the microbiome to prevent global biodiversity loss. Nat Microbiol. 2022 11; 7(11):1726-1735.
Peixoto RS, Voolstra CR, Sweet M, Duarte CM, Carvalho S, Villela H, Lunshof JE, Gram L, Woodhams DC, Walter J, Roik A, Hentschel U, Thurber RV, Daisley B, Ushijima B, Daffonchio D, Costa R, Keller-Costa T, Bowman JS, Rosado AS, Reid G, Mason CE, Walke JB, Thomas T, Berg G. PMID: 35864220.
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29 Fields:
Translation:
HumansAnimals
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Machine Learning Predicts Biogeochemistry from Microbial Community Structure in a Complex Model System. Microbiol Spectr. 2022 02 23; 10(1):e0190921.
Dutta A, Goldman T, Keating J, Burke E, Williamson N, Dirmeier R, Bowman JS. PMID: 35138192; PMCID: PMC8826735.
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2 Fields:
Translation:
Animals
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From microbial community structure to metabolic inference using paprica. STAR Protoc. 2021 12 17; 2(4):101005.
Erazo NG, Dutta A, Bowman JS. PMID: 34950886; PMCID: PMC8672035.
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2 Fields:
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Detection of Sulfate-Reducing Bacteria as an Indicator for Successful Mitigation of Sulfide Production. Appl Environ Microbiol. 2021 11 10; 87(23):e0174821.
Dutta A, Valle F, Goldman T, Keating J, Burke E, Williamson N, Dirmeier R, Bowman JS. PMID: 34550760; PMCID: PMC8579970.
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2 Fields:
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Cells
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Making Sense of a Scent-Sensing Metaphor for Microbes and Environmental Predictions. mSystems. 2021 Aug 31; 6(4):e0099321.
Bowman JS. PMID: 34463569; PMCID: PMC8668242.
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1 Fields:
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Recurrent microbial community types driven by nearshore and seasonal processes in coastal Southern California. Environ Microbiol. 2021 06; 23(6):3225-3239.
Wilson JM, Chamberlain EJ, Erazo N, Carter ML, Bowman JS. PMID: 33928761.
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4 Fields:
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Microbial diversity and activity in Southern California salterns and bitterns: analogues for remnant ocean worlds. Environ Microbiol. 2021 07; 23(7):3825-3839.
Klempay B, Arandia-Gorostidi N, Dekas AE, Bartlett DH, Carr CE, Doran PT, Dutta A, Erazo N, Fisher LA, Glass JB, Pontefract A, Som SM, Wilson JM, Schmidt BE, Bowman JS. PMID: 33621409.
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3 Fields:
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Sensitivity of the mangrove-estuarine microbial community to aquaculture effluent. iScience. 2021 Mar 19; 24(3):102204.
Erazo NG, Bowman JS. PMID: 33786421; PMCID: PMC7994199.
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5
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Understanding Microbial Community Dynamics in Up-Flow Bioreactors to Improve Mitigation Strategies for Oil Souring. Front Microbiol. 2020; 11:585943.
Dutta A, Smith B, Goldman T, Walker L, Streets M, Eden B, Dirmeier R, Bowman JS. PMID: 33343524; PMCID: PMC7744764.
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PubMed Mentions:
3
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Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems. mSystems. 2020 Oct 20; 5(5).
Allard SM, Costa MT, Bulseco AN, Helfer V, Wilkins LGE, Hassenrück C, Zengler K, Zimmer M, Erazo N, Mazza Rodrigues JL, Duke N, Melo VMM, Vanwonterghem I, Junca H, Makonde HM, Jiménez DJ, Tavares TCL, Fusi M, Daffonchio D, Duarte CM, Peixoto RS, Rosado AS, Gilbert JA, Bowman J. PMID: 33082281; PMCID: PMC7577295.
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13 Fields:
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Identification of Microbial Dark Matter in Antarctic Environments. Front Microbiol. 2018; 9:3165.
Bowman JS. PMID: 30619224; PMCID: PMC6305705.
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13
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The NASA Roadmap to Ocean Worlds. Astrobiology. 2019 01; 19(1):1-27.
Hendrix AR, Hurford TA, Barge LM, Bland MT, Bowman JS, Brinckerhoff W, Buratti BJ, Cable ML, Castillo-Rogez J, Collins GC, Diniega S, German CR, Hayes AG, Hoehler T, Hosseini S, Howett CJA, McEwen AS, Neish CD, Neveu M, Nordheim TA, Patterson GW, Patthoff DA, Phillips C, Rhoden A, Schmidt BE, Singer KN, Soderblom JM, Vance SD. PMID: 30346215; PMCID: PMC6338575.
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17 Fields:
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Recurrent seascape units identify key ecological processes along the western Antarctic Peninsula. Glob Chang Biol. 2018 07; 24(7):3065-3078.
Bowman JS, Kavanaugh MT, Doney SC, Ducklow HW. PMID: 29635875.
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2 Fields:
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Denitrification potential of the eastern oyster microbiome using a 16S rRNA gene based metabolic inference approach. PLoS One. 2017; 12(9):e0185071.
Arfken A, Song B, Bowman JS, Piehler M. PMID: 28934286; PMCID: PMC5608302.
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26 Fields:
Translation:
AnimalsCells
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Bacterial community segmentation facilitates the prediction of ecosystem function along the coast of the western Antarctic Peninsula. ISME J. 2017 06; 11(6):1460-1471.
Bowman JS, Amaral-Zettler LA, J Rich J, M Luria C, Ducklow HW. PMID: 28106879; PMCID: PMC5437343.
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22 Fields:
Translation:
Cells
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Wind-driven distribution of bacteria in coastal Antarctica: evidence from the Ross Sea region. Polar Biology. 2017; 40(1):25-35.
Bowman, J
Deming, J.
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The Astrobiology Primer v2.0. Astrobiology. 2016 08; 16(8):561-653.
Domagal-Goldman SD, Wright KE, Adamala K, Arina de la Rubia L, Bond J, Dartnell LR, Goldman AD, Lynch K, Naud ME, Paulino-Lima IG, Singer K, Walther-Antonio M, Abrevaya XC, Anderson R, Arney G, Atri D, Azúa-Bustos A, Bowman JS, Brazelton WJ, Brennecka GA, Carns R, Chopra A, Colangelo-Lillis J, Crockett CJ, DeMarines J, Frank EA, Frantz C, de la Fuente E, Galante D, Glass J, Gleeson D, Glein CR, Goldblatt C, Horak R, Horodyskyj L, Kaçar B, Kereszturi A, Knowles E, Mayeur P, McGlynn S, Miguel Y, Montgomery M, Neish C, Noack L, Rugheimer S, Stüeken EE, Tamez-Hidalgo P, Imari Walker S, Wong T. PMID: 27532777; PMCID: PMC5008114.
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21 Fields:
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The relationship between sea ice bacterial community structure and biogeochemistry: A synthesis of current knowledge and known unknowns. Elementa, Science of the Anthropocene. 2015; (3).
Bowman, J.
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Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula. PLoS One. 2015; 10(8):e0135868.
Bowman JS, Ducklow HW. PMID: 26285202; PMCID: PMC4540456.
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PubMed Mentions:
55 Fields:
Translation:
Cells
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Methods for biogeochemical studies of sea ice: The state of the art, caveats, and recommendations. Elementa, Science of the Anthropocene. 2015; (3).
Lisa A Miller, Francois Fripiat, Brent GT Else, Jeff S Bowman, Kristina A Brown, R Eric Collins, Marcela Ewert, Agneta Fransson, Michel Gosselin, Delphine Lannuzel, Klaus M Meiners, Christine Michel, Jun Nishioka, Daiki Nomura, Stathys Papadimitriou, Lynn M Russell, Lise Lotte Sørensen, David N Thomas, Jean-Louis Tison, Maria A Van Leeuwe, Martin Vancoppenolle, Eric W Wolff, Jiayun Zhou.
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Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis. BMC Genomics. 2014 Dec 16; 15:1120.
Bowman JS, Deming JW. PMID: 25515036; PMCID: PMC4320567.
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10 Fields:
Translation:
Cells
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Frost flowers on young Arctic sea ice: The climatic, chemical, and microbial significance of an emerging ice type. Journal of Geophysical Research: Atmospheres. 2014; 20(119).
DG Barber, JK Ehn, M Pucko, Søren Rysgaard, JW Deming, JS Bowman, T Papakyriakou, RJ Galley, DH Søgaard.
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Bacterial diversity in snow on North Pole ice floes. Extremophiles. 2014 Nov; 18(6):945-51.
Hauptmann AL, Stibal M, Bælum J, Sicheritz-Pontén T, Brunak S, Bowman JS, Hansen LH, Jacobsen CS, Blom N. PMID: 24951969; PMCID: PMC4196135.
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9 Fields:
Translation:
Cells
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The genetic potential for key biogeochemical processes in Arctic frost flowers and young sea ice revealed by metagenomic analysis. FEMS Microbiol Ecol. 2014 Aug; 89(2):376-87.
Bowman JS, Berthiaume CT, Armbrust EV, Deming JW. PMID: 24673287.
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PubMed Mentions:
7 Fields:
Translation:
CellsPHPublic Health
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Did life originate from a global chemical reactor? Geobiology. 2013 Mar; 11(2):101-26.
Stüeken EE, Anderson RE, Bowman JS, Brazelton WJ, Colangelo-Lillis J, Goldman AD, Som SM, Baross JA. PMID: 23331348.
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28 Fields:
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Wide distribution of closely related, antibiotic-producing Arthrobacter strains throughout the Arctic Ocean. Appl Environ Microbiol. 2012 Mar; 78(6):2039-42.
Wietz M, Månsson M, Bowman JS, Blom N, Ng Y, Gram L. PMID: 22247128; PMCID: PMC3298137.
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PubMed Mentions:
13 Fields:
Translation:
Cells
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Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. ISME J. 2012 Jan; 6(1):11-20.
Bowman JS, Rasmussen S, Blom N, Deming JW, Rysgaard S, Sicheritz-Ponten T. PMID: 21716307; PMCID: PMC3246233.
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PubMed Mentions:
48 Fields:
Translation:
Cells
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Elevated bacterial abundance and exopolymers in saline frost flowers and implications for atmospheric chemistry and microbial dispersal. Geophysical Research Letters. 2010; 13(37).
JS Bowman, JW Deming.
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Chemical and physical properties of some saline lakes in Alberta and Saskatchewan. Saline Syst. 2008 Apr 22; 4:3.
Bowman JS, Sachs JP. PMID: 18430240; PMCID: PMC2365950.
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1