Jeff Hasty
Research Bibliographic
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Survival of the weakest in non-transitive asymmetric interactions among strains of E. coli. Nat Commun. 2020 11 27; 11(1):6055.
Liao MJ, Miano A, Nguyen CB, Chao L, Hasty J. PMID: 33247128.
View in: PubMed Mentions: Fields: Translation: Cells
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A programmable fate decision landscape underlies single-cell aging in yeast. Science. 2020 Jul 17; 369(6501):325-329.
Li Y, Jiang Y, Paxman J, O'Laughlin R, Klepin S, Zhu Y, Pillus L, Tsimring LS, Hasty J, Hao N. PMID: 32675375.
View in: PubMed Mentions: Fields: Translation: AnimalsCells
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Interfacing gene circuits with microelectronics through engineered population dynamics. Sci Adv. 2020 May; 6(21):eaaz8344.
Din MO, Martin A, Razinkov I, Csicsery N, Hasty J. PMID: 32494744.
View in: PubMed Mentions: 1 Fields:
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One-Day Construction of Multiplex Arrays to Harness Natural CRISPR-Cas Systems. ACS Synth Biol. 2020 05 15; 9(5):1129-1137.
Cooper RM, Hasty J. PMID: 32271547.
View in: PubMed Mentions: Fields:
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Genetically engineered control of phenotypic structure in microbial colonies. Nat Microbiol. 2020 05; 5(5):697-705.
Bittihn P, Didovyk A, Tsimring LS, Hasty J. PMID: 32284568.
View in: PubMed Mentions: Fields: Translation: Cells
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Inducible cell-to-cell signaling for tunable dynamics in microbial communities. Nat Commun. 2020 03 04; 11(1):1193.
Miano A, Liao MJ, Hasty J. PMID: 32132536.
View in: PubMed Mentions: 2 Fields: Translation: Cells
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Genome-scale transcriptional dynamics and environmental biosensing. Proc Natl Acad Sci U S A. 2020 02 11; 117(6):3301-3306.
Graham G, Csicsery N, Stasiowski E, Thouvenin G, Mather WH, Ferry M, Cookson S, Hasty J. PMID: 31974311.
View in: PubMed Mentions: 1 Fields: Translation: CellsPHPublic Health
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Flower-like patterns in multi-species bacterial colonies. Elife. 2020 Jan 14; 9.
Xiong L, Cao Y, Cooper R, Rappel WJ, Hasty J, Tsimring L. PMID: 31933477.
View in: PubMed Mentions: 2 Fields:
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Rock-paper-scissors: Engineered population dynamics increase genetic stability. Science. 2019 09 06; 365(6457):1045-1049.
Liao MJ, Din MO, Tsimring L, Hasty J. PMID: 31488693.
View in: PubMed Mentions: 6 Fields: Translation: Cells
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Divergent Aging of Isogenic Yeast Cells Revealed through Single-Cell Phenotypic Dynamics. Cell Syst. 2019 03 27; 8(3):242-253.e3.
Jin M, Li Y, O'Laughlin R, Bittihn P, Pillus L, Tsimring LS, Hasty J, Hao N. PMID: 30852250.
View in: PubMed Mentions: 6 Fields: Translation: AnimalsCells
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Microfluidics-Based Analysis of Contact-dependent Bacterial Interactions. Bio Protoc. 2018 Aug 20; 8(16).
Cooper R, Tsimring L, Hasty J. PMID: 30370317.
View in: PubMed Mentions:
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Rational engineering of synthetic microbial systems: from single cells to consortia. Curr Opin Microbiol. 2018 10; 45:92-99.
Bittihn P, Din MO, Tsimring LS, Hasty J. PMID: 29574330.
View in: PubMed Mentions: 6 Fields: Translation: Cells
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Inter-species population dynamics enhance microbial horizontal gene transfer and spread of antibiotic resistance. Elife. 2017 11 01; 6.
Cooper RM, Tsimring L, Hasty J. PMID: 29091031.
View in: PubMed Mentions: 18 Fields: Translation: Cells
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Multigenerational silencing dynamics control cell aging. Proc Natl Acad Sci U S A. 2017 10 17; 114(42):11253-11258.
Li Y, Jin M, O'Laughlin R, Bittihn P, Tsimring LS, Pillus L, Hasty J, Hao N. PMID: 29073021.
View in: PubMed Mentions: 15 Fields: Translation: AnimalsCells
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Rapid and Scalable Preparation of Bacterial Lysates for Cell-Free Gene Expression. ACS Synth Biol. 2017 12 15; 6(12):2198-2208.
Didovyk A, Tonooka T, Tsimring L, Hasty J. PMID: 28795570.
View in: PubMed Mentions: 11 Fields: Translation: Cells
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Synchronized DNA cycling across a bacterial population. Nat Genet. 2017 Aug; 49(8):1282-1285.
Baumgart L, Mather W, Hasty J. PMID: 28692067.
View in: PubMed Mentions: 1 Fields: Translation: Cells
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A stabilized microbial ecosystem of self-limiting bacteria using synthetic quorum-regulated lysis. Nat Microbiol. 2017 Jun 12; 2:17083.
Scott SR, Din MO, Bittihn P, Xiong L, Tsimring LS, Hasty J. PMID: 28604679.
View in: PubMed Mentions: 16 Fields: Translation: HumansCells
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Suppression of Beneficial Mutations in Dynamic Microbial Populations. Phys Rev Lett. 2017 Jan 13; 118(2):028102.
Bittihn P, Hasty J, Tsimring LS. PMID: 28128631.
View in: PubMed Mentions: 3 Fields: Translation: Cells
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FBB: a fast Bayesian-bound tool to calibrate RNA-seq aligners. Bioinformatics. 2017 01 15; 33(2):210-218.
Rodriguez-Lujan I, Hasty J, Huerta R. PMID: 27663496.
View in: PubMed Mentions: Fields: Translation: AnimalsCells
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Criticality and Adaptivity in Enzymatic Networks. Biophys J. 2016 Sep 06; 111(5):1078-87.
Steiner PJ, Williams RJ, Hasty J, Tsimring LS. PMID: 27602735.
View in: PubMed Mentions: 2 Fields:
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Synchronized cycles of bacterial lysis for in vivo delivery. Nature. 2016 08 04; 536(7614):81-85.
Din MO, Danino T, Prindle A, Skalak M, Selimkhanov J, Allen K, Julio E, Atolia E, Tsimring LS, Bhatia SN, Hasty J. PMID: 27437587.
View in: PubMed Mentions: 67 Fields: Translation: AnimalsCells
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Transcriptional regulation with CRISPR-Cas9: principles, advances, and applications. Curr Opin Biotechnol. 2016 08; 40:177-184.
Didovyk A, Borek B, Tsimring L, Hasty J. PMID: 27344519.
View in: PubMed Mentions: 11 Fields: Translation: HumansAnimalsCells
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Quorum Sensing Communication Modules for Microbial Consortia. ACS Synth Biol. 2016 09 16; 5(9):969-77.
Scott SR, Hasty J. PMID: 27172092.
View in: PubMed Mentions: 24 Fields: Translation: Cells
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Turing Patterning Using Gene Circuits with Gas-Induced Degradation of Quorum Sensing Molecules. PLoS One. 2016; 11(5):e0153679.
Borek B, Hasty J, Tsimring L. PMID: 27148743.
View in: PubMed Mentions: 4 Fields: Translation: Cells
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Orthogonal Modular Gene Repression in Escherichia coli Using Engineered CRISPR/Cas9. ACS Synth Biol. 2016 Jan 15; 5(1):81-8.
Didovyk A, Borek B, Hasty J, Tsimring L. PMID: 26390083.
View in: PubMed Mentions: 12 Fields: Translation: Cells
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A Microfluidic Platform for Long-Term Monitoring of Algae in a Dynamic Environment. ACS Synth Biol. 2016 Jan 15; 5(1):8-14.
Luke CS, Selimkhanov J, Baumgart L, Cohen SE, Golden SS, Cookson NA, Hasty J. PMID: 26332284.
View in: PubMed Mentions: 4 Fields: Translation: Cells
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Distributed classifier based on genetically engineered bacterial cell cultures. ACS Synth Biol. 2015 Jan 16; 4(1):72-82.
Didovyk A, Kanakov OI, Ivanchenko MV, Hasty J, Huerta R, Tsimring L. PMID: 25349924.
View in: PubMed Mentions: 5 Fields: Translation: Cells
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Dynamic localization of the cyanobacterial circadian clock proteins. Curr Biol. 2014 Aug 18; 24(16):1836-44.
Cohen SE, Erb ML, Selimkhanov J, Dong G, Hasty J, Pogliano J, Golden SS. PMID: 25127213.
View in: PubMed Mentions: 14 Fields: Translation: Cells
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Rapid and tunable post-translational coupling of genetic circuits. Nature. 2014 Apr 17; 508(7496):387-91.
Prindle A, Selimkhanov J, Li H, Razinkov I, Tsimring LS, Hasty J. PMID: 24717442.
View in: PubMed Mentions: 48 Fields: Translation: Cells
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Measuring competitive fitness in dynamic environments. J Phys Chem B. 2013 Oct 24; 117(42):13175-81.
Razinkov IA, Baumgartner BL, Bennett MR, Tsimring LS, Hasty J. PMID: 23841812.
View in: PubMed Mentions: 5 Fields: Translation: Animals
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Dual delayed feedback provides sensitivity and robustness to the NF-κB signaling module. PLoS Comput Biol. 2013; 9(6):e1003112.
Longo DM, Selimkhanov J, Kearns JD, Hasty J, Hoffmann A, Tsimring LS. PMID: 23825938.
View in: PubMed Mentions: 13 Fields: Translation: Cells
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Vacuum-assisted cell loading enables shear-free mammalian microfluidic culture. Lab Chip. 2012 Nov 21; 12(22):4732-7.
Kolnik M, Tsimring LS, Hasty J. PMID: 22961584.
View in: PubMed Mentions: 14 Fields: Translation: HumansAnimalsCells
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Making gene circuits sing. Proc Natl Acad Sci U S A. 2012 Oct 16; 109(42):16758-9.
Prindle A, Hasty J. PMID: 23027956.
View in: PubMed Mentions: 1 Fields: Translation: Cells
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Genetic Circuits in Salmonella typhimurium. ACS Synth Biol. 2012 Oct 19; 1(10):458-464.
Prindle A, Selimkhanov J, Danino T, Samayoa P, Goldberg A, Bhatia SN, Hasty J. PMID: 23097749.
View in: PubMed Mentions: 10 Fields:
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Fast stochastic algorithm for simulating evolutionary population dynamics. Bioinformatics. 2012 May 01; 28(9):1230-8.
Mather WH, Hasty J, Tsimring LS. PMID: 22437850.
View in: PubMed Mentions: 4 Fields: Translation: Cells
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Queueing up for enzymatic processing: correlated signaling through coupled degradation. Mol Syst Biol. 2011 Dec 20; 7:561.
Cookson NA, Mather WH, Danino T, Mondragón-Palomino O, Williams RJ, Tsimring LS, Hasty J. PMID: 22186735.
View in: PubMed Mentions: 48 Fields: Translation: Cells
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A sensing array of radically coupled genetic 'biopixels'. Nature. 2011 Dec 18; 481(7379):39-44.
Prindle A, Samayoa P, Razinkov I, Danino T, Tsimring LS, Hasty J. PMID: 22178928.
View in: PubMed Mentions: 89 Fields: Translation: Cells
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Antagonistic gene transcripts regulate adaptation to new growth environments. Proc Natl Acad Sci U S A. 2011 Dec 27; 108(52):21087-92.
Baumgartner BL, Bennett MR, Ferry M, Johnson TL, Tsimring LS, Hasty J. PMID: 22160690.
View in: PubMed Mentions: 17 Fields: Translation: Animals
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Recent advances in single-cell studies of gene regulation. Curr Opin Biotechnol. 2012 Feb; 23(1):34-40.
Selimkhanov J, Hasty J, Tsimring LS. PMID: 22154220.
View in: PubMed Mentions: 4 Fields: Translation: HumansAnimalsCells
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Factorized time-dependent distributions for certain multiclass queueing networks and an application to enzymatic processing networks. Queueing Syst. 2011 Dec; 69(3-4):313-328.
Mather WH, Hasty J, Tsimring LS, Williams RJ. PMID: 24596432.
View in: PubMed Mentions:
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Entrainment of a population of synthetic genetic oscillators. Science. 2011 Sep 02; 333(6047):1315-1319.
Mondragón-Palomino O, Danino T, Selimkhanov J, Tsimring L, Hasty J. PMID: 21885786.
View in: PubMed Mentions: 49 Fields: Translation: Cells
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In-silico patterning of vascular mesenchymal cells in three dimensions. PLoS One. 2011; 6(5):e20182.
Danino T, Volfson D, Bhatia SN, Tsimring L, Hasty J. PMID: 21633504.
View in: PubMed Mentions: 3 Fields: Translation: HumansAnimalsCells
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Microfluidics for synthetic biology: from design to execution. Methods Enzymol. 2011; 497:295-372.
Ferry MS, Razinkov IA, Hasty J. PMID: 21601093.
View in: PubMed Mentions: 39 Fields: Translation: AnimalsCells
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Correlation resonance generated by coupled enzymatic processing. Biophys J. 2010 Nov 17; 99(10):3172-81.
Mather WH, Cookson NA, Hasty J, Tsimring LS, Williams RJ. PMID: 21081064.
View in: PubMed Mentions: 14 Fields:
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Biochemistry. Stochastic emergence of groupthink. Science. 2010 May 21; 328(5981):987-8.
Prindle A, Hasty J. PMID: 20489014.
View in: PubMed Mentions: 3 Fields: Translation: AnimalsCells
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Streaming instability in growing cell populations. Phys Rev Lett. 2010 May 21; 104(20):208101.
Mather W, Mondragón-Palomino O, Danino T, Hasty J, Tsimring LS. PMID: 20867071.
View in: PubMed Mentions: 19 Fields: Translation: Cells
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A synchronized quorum of genetic clocks. Nature. 2010 Jan 21; 463(7279):326-30.
Danino T, Mondragón-Palomino O, Tsimring L, Hasty J. PMID: 20090747.
View in: PubMed Mentions: 224 Fields: Translation: Cells
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The pedestrian watchmaker: genetic clocks from engineered oscillators. FEBS Lett. 2009 Dec 17; 583(24):3931-7.
Cookson NA, Tsimring LS, Hasty J. PMID: 19903483.
View in: PubMed Mentions: 5 Fields: Translation: Animals
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Cell cycle-dependent variations in protein concentration. Nucleic Acids Res. 2010 May; 38(8):2676-81.
Cookson NA, Cookson SW, Tsimring LS, Hasty J. PMID: 20019065.
View in: PubMed Mentions: 13 Fields: Translation: Animals
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Delay-induced degrade-and-fire oscillations in small genetic circuits. Phys Rev Lett. 2009 Feb 13; 102(6):068105.
Mather W, Bennett MR, Hasty J, Tsimring LS. PMID: 19257639.
View in: PubMed Mentions: 47 Fields:
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A fast, robust and tunable synthetic gene oscillator. Nature. 2008 Nov 27; 456(7221):516-9.
Stricker J, Cookson S, Bennett MR, Mather WH, Tsimring LS, Hasty J. PMID: 18971928.
View in: PubMed Mentions: 329 Fields: Translation: Cells
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Biomechanical ordering of dense cell populations. Proc Natl Acad Sci U S A. 2008 Oct 07; 105(40):15346-51.
Volfson D, Cookson S, Hasty J, Tsimring LS. PMID: 18832176.
View in: PubMed Mentions: 61 Fields: Translation: Cells
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Metabolic gene regulation in a dynamically changing environment. Nature. 2008 Aug 28; 454(7208):1119-22.
Bennett MR, Pang WL, Ostroff NA, Baumgartner BL, Nayak S, Tsimring LS, Hasty J. PMID: 18668041.
View in: PubMed Mentions: 121 Fields: Translation: AnimalsCells
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Phenotypic variability of growing cellular populations. Proc Natl Acad Sci U S A. 2007 Nov 27; 104(48):18982-7.
Lu T, Shen T, Bennett MR, Wolynes PG, Hasty J. PMID: 18025471.
View in: PubMed Mentions: 13 Fields:
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A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae. Mol Syst Biol. 2007; 3:127.
Grilly C, Stricker J, Pang WL, Bennett MR, Hasty J. PMID: 17667949.
View in: PubMed Mentions: 41 Fields: Translation: AnimalsCells
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Transient dynamics of genetic regulatory networks. Biophys J. 2007 May 15; 92(10):3501-12.
Bennett MR, Volfson D, Tsimring L, Hasty J. PMID: 17350994.
View in: PubMed Mentions: 19 Fields: Translation: Cells
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Dynamics of single-cell gene expression. Mol Syst Biol. 2006; 2:64.
Longo D, Hasty J. PMID: 17130866.
View in: PubMed Mentions: 45 Fields: Translation: AnimalsCells
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Statistics of cellular signal transduction as a race to the nucleus by multiple random walkers in compartment/phosphorylation space. Proc Natl Acad Sci U S A. 2006 Nov 07; 103(45):16752-7.
Lu T, Shen T, Zong C, Hasty J, Wolynes PG. PMID: 17071742.
View in: PubMed Mentions: 14 Fields: Translation: Cells
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Stochastically driven genetic circuits. Chaos. 2006 Jun; 16(2):026103.
Tsimring LS, Volfson D, Hasty J. PMID: 16822035.
View in: PubMed Mentions: 4 Fields: Translation: HumansAnimalsCells
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Effective temperature in stochastic kinetics and gene networks. Biophys J. 2006 Jul 01; 91(1):84-94.
Lu T, Hasty J, Wolynes PG. PMID: 16617067.
View in: PubMed Mentions: 6 Fields: Translation: HumansAnimalsCells
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Origins of extrinsic variability in eukaryotic gene expression. Nature. 2006 Feb 16; 439(7078):861-4.
Volfson D, Marciniak J, Blake WJ, Ostroff N, Tsimring LS, Hasty J. PMID: 16372021.
View in: PubMed Mentions: 124 Fields: Translation: AnimalsCells
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Monitoring dynamics of single-cell gene expression over multiple cell cycles. Mol Syst Biol. 2005; 1:2005.0024.
Cookson S, Ostroff N, Pang WL, Volfson D, Hasty J. PMID: 16729059.
View in: PubMed Mentions: 33 Fields: Translation: Animals
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Delay-induced stochastic oscillations in gene regulation. Proc Natl Acad Sci U S A. 2005 Oct 11; 102(41):14593-8.
Bratsun D, Volfson D, Tsimring LS, Hasty J. PMID: 16199522.
View in: PubMed Mentions: 86 Fields:
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Cellular growth and division in the Gillespie algorithm. Syst Biol (Stevenage). 2004 Jun; 1(1):121-8.
Lu T, Volfson D, Tsimring L, Hasty J. PMID: 17052122.
View in: PubMed Mentions: 29 Fields: Translation: HumansAnimals
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Design then mutate. Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26):16516-8.
Hasty J. PMID: 12486244.
View in: PubMed Mentions: Fields:
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Engineered gene circuits. Nature. 2002 Nov 14; 420(6912):224-30.
Hasty J, McMillen D, Collins JJ. PMID: 12432407.
View in: PubMed Mentions: 177 Fields: Translation: AnimalsCells
This graph shows the total number of publications by year. To see the data as text, click here.
This graph shows the total number of publications by year. To return to the graph, click here.
Year | Publications |
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2002 | 2 | 2004 | 1 | 2005 | 3 | 2006 | 4 | 2007 | 3 | 2008 | 3 | 2009 | 3 | 2010 | 4 | 2011 | 8 | 2012 | 4 | 2013 | 2 | 2014 | 3 | 2015 | 2 | 2016 | 6 | 2017 | 6 | 2018 | 2 | 2019 | 2 | 2020 | 8 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
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