Eric Knight

Title(s)Associate Physician Diplomate, Anesthesiology
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Genome-scale reconstruction of the sigma factor network in Escherichia coli: topology and functional states. BMC Biol. 2014 Jan 24; 12:4. Cho BK, Kim D, Knight EM, Zengler K, Palsson BO. PMID: 24461193; PMCID: PMC3923258.
      View in: PubMed   Mentions: 77     Fields:    Translation:Cells
    2. Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis. Proc Natl Acad Sci U S A. 2012 Feb 14; 109(7):2678-83. Nogales J, Gudmundsson S, Knight EM, Palsson BO, Thiele I. PMID: 22308420; PMCID: PMC3289291.
      View in: PubMed   Mentions: 131     Fields:    Translation:Cells
    3. RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media. Proc Natl Acad Sci U S A. 2010 Nov 23; 107(47):20500-5. Conrad TM, Frazier M, Joyce AR, Cho BK, Knight EM, Lewis NE, Landick R, Palsson BØ. PMID: 21057108; PMCID: PMC2996682.
      View in: PubMed   Mentions: 138     Fields:    Translation:Cells
    4. Genetic basis of growth adaptation of Escherichia coli after deletion of pgi, a major metabolic gene. PLoS Genet. 2010 Nov 04; 6(11):e1001186. Charusanti P, Conrad TM, Knight EM, Venkataraman K, Fong NL, Xie B, Gao Y, Palsson BØ. PMID: 21079674; PMCID: PMC2973815.
      View in: PubMed   Mentions: 77     Fields:    Translation:Cells
    5. The transcription unit architecture of the Escherichia coli genome. Nat Biotechnol. 2009 Nov; 27(11):1043-9. Cho BK, Zengler K, Qiu Y, Park YS, Knight EM, Barrett CL, Gao Y, Palsson BØ. PMID: 19881496; PMCID: PMC3832199.
      View in: PubMed   Mentions: 163     Fields:    Translation:Cells
    6. Gene expression profiling and the use of genome-scale in silico models of Escherichia coli for analysis: providing context for content. J Bacteriol. 2009 Jun; 191(11):3437-44. Lewis NE, Cho BK, Knight EM, Palsson BO. PMID: 19363119; PMCID: PMC2681886.
      View in: PubMed   Mentions: 30     Fields:    Translation:Cells
    7. Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli. Proc Natl Acad Sci U S A. 2008 Dec 09; 105(49):19462-7. Cho BK, Barrett CL, Knight EM, Park YS, Palsson BØ. PMID: 19052235; PMCID: PMC2614783.
      View in: PubMed   Mentions: 112     Fields:    Translation:Cells
    8. Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts. Genome Res. 2008 Jun; 18(6):900-10. Cho BK, Knight EM, Barrett CL, Palsson BØ. PMID: 18340041; PMCID: PMC2413157.
      View in: PubMed   Mentions: 110     Fields:    Translation:Cells
    9. Genomewide identification of protein binding locations using chromatin immunoprecipitation coupled with microarray. Methods Mol Biol. 2008; 439:131-45. Cho BK, Knight EM, Palsson BØ. PMID: 18370100.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    10. Systems approach to refining genome annotation. Proc Natl Acad Sci U S A. 2006 Nov 14; 103(46):17480-4. Reed JL, Patel TR, Chen KH, Joyce AR, Applebee MK, Herring CD, Bui OT, Knight EM, Fong SS, Palsson BO. PMID: 17088549; PMCID: PMC1859954.
      View in: PubMed   Mentions: 154     Fields:    Translation:Cells
    11. Transcriptional regulation of the fad regulon genes of Escherichia coli by ArcA. Microbiology (Reading). 2006 Aug; 152(Pt 8):2207-2219. Cho BK, Knight EM, Palsson BØ. PMID: 16849788.
      View in: PubMed   Mentions: 33     Fields:    Translation:Cells
    12. PCR-based tandem epitope tagging system for Escherichia coli genome engineering. Biotechniques. 2006 Jan; 40(1):67-72. Cho BK, Knight EM, Palsson BO. PMID: 16454042.
      View in: PubMed   Mentions: 29     Fields:    Translation:Cells
    13. In silico design and adaptive evolution of Escherichia coli for production of lactic acid. Biotechnol Bioeng. 2005 Sep 05; 91(5):643-8. Fong SS, Burgard AP, Herring CD, Knight EM, Blattner FR, Maranas CD, Palsson BO. PMID: 15962337.
      View in: PubMed   Mentions: 132     Fields:    Translation:Cells
    14. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 2004 May 06; 429(6987):92-6. Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. PMID: 15129285.
      View in: PubMed   Mentions: 319     Fields:    Translation:Cells
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