Manish Kumar

Title(s)Assistant Project Scientist, Pediatrics
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
ORCID ORCID Icon0000-0001-8035-3399 Additional info
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Guild and Niche Determination Enable Targeted Alteration of the Microbiome. bioRxiv. 2023 May 11. Moyne O, Al-Bassam M, Lieng C, Thiruppathy D, Norton GJ, Kumar M, Haddad E, Zaramela LS, Zengler K. PMID: 37214910; PMCID: PMC10197622.
      View in: PubMed   Mentions:
    2. Genome-Scale Metabolic Modeling Enables In-Depth Understanding of Big Data. Metabolites. 2021 Dec 24; 12(1). Passi A, Tibocha-Bonilla JD, Kumar M, Tec-Campos D, Zengler K, Zuniga C. PMID: 35050136; PMCID: PMC8778254.
      View in: PubMed   Mentions: 17  
    3. The sum is greater than the parts: exploiting microbial communities to achieve complex functions. Curr Opin Biotechnol. 2021 02; 67:149-157. Zaramela LS, Moyne O, Kumar M, Zuniga C, Tibocha-Bonilla JD, Zengler K. PMID: 33561703.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimals
    4. Dynamic resource allocation drives growth under nitrogen starvation in eukaryotes. NPJ Syst Biol Appl. 2020 05 15; 6(1):14. Tibocha-Bonilla JD, Kumar M, Richelle A, Godoy-Silva RD, Zengler K, Zuñiga C. PMID: 32415097; PMCID: PMC7229059.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    5. Modelling approaches for studying the microbiome. Nat Microbiol. 2019 08; 4(8):1253-1267. Kumar M, Ji B, Zengler K, Nielsen J. PMID: 31337891.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCells
    6. Gut microbiota dysbiosis is associated with malnutrition and reduced plasma amino acid levels: Lessons from genome-scale metabolic modeling. Metab Eng. 2018 09; 49:128-142. Kumar M, Ji B, Babaei P, Das P, Lappa D, Ramakrishnan G, Fox TE, Haque R, Petri WA, Bäckhed F, Nielsen J. PMID: 30075203; PMCID: PMC6871511.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    7. Current status and challenges in biobutanol production. Bioenergy and Biofuels. 2018; 237-262. Manish Kumar, Tridib Kumar Bhowmick, Supreet Saini, Kalyan Gayen. View Publication.
    8. Human gut microbiota and healthy aging: Recent developments and future prospective. Nutr Healthy Aging. 2016 Oct 27; 4(1):3-16. Kumar M, Babaei P, Ji B, Nielsen J. PMID: 28035338; PMCID: PMC5166512.
      View in: PubMed   Mentions: 69  
    9. Elementary mode analysis reveals that Clostridium acetobutylicum modulates its metabolic strategy under external stress. Mol Biosyst. 2014 Aug; 10(8):2090-105. Kumar M, Saini S, Gayen K. PMID: 24852622.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    10. Acetone-butanol-ethanol fermentation analysis using only high performance liquid chromatography. Analytical Methods. 2014; 6(3):774-781. Manish Kumar, Supreet Saini, Kalyan Gayen. View Publication.
    11. Role of extracellular cues to trigger the metabolic phase shifting from acidogenesis to solventogenesis in Clostridium acetobutylicum. Bioresour Technol. 2013 Jun; 138:55-62. Kumar M, Gayen K, Saini S. PMID: 23612162.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    12. Metabolic engineering for enhanced hydrogen production: a review. Can J Microbiol. 2013 Feb; 59(2):59-78. Goyal Y, Kumar M, Gayen K. PMID: 23461513.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    13. Comparative economic assessment of ABE fermentation based on cellulosic and non-cellulosic feedstocks. Applied Energy. 2012; 93:193-204. Manish Kumar, Yogesh Goyal, Abhijit Sarkar, Kalyan Gayen. View Publication.
    14. Biobutanol: The future biofuel. Biomass Conversion. 2012; 221-236. Manish Kumar, Kalyan Gayen. View Publication.
    15. Developments in biobutanol production: new insights. Applied Energy. 2011; 88(6):1999-2012. Manish Kumar, Kalyan Gayen. View Publication.
    16. In silico quantification of optimal lysine synthesis during growth of corynebacterium glutamicum on mixed substrates (Glucose and Lactate). International Journal of Biotechnology & Biochemistry. 2011; 7(1):115-133. Kalyan Gayen, Manish Kumar, Meghna Rajvanshi, KV Venkatesh. View Publication.
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