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Majid Ghassemian

TitleProject Scientist
InstitutionUniversity of California San Diego
DepartmentChemistry and Biochemistry
Address9500 Gilman Drive #0378
La Jolla CA 92093
Phone858-822-0032
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Aznar N, Ear J, Dunkel Y, Sun N, Satterfield K, He F, Kalogriopoulos NA, Lopez-Sanchez I, Ghassemian M, Sahoo D, Kufareva I, Ghosh P. Convergence of Wnt, growth factor, and heterotrimeric G protein signals on the guanine nucleotide exchange factor Daple. Sci Signal. 2018 Feb 27; 11(519). PMID: 29487190.
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    2. Wang VY, Li Y, Kim D, Zhong X, Du Q, Ghassemian M, Ghosh G. Bcl3 Phosphorylation by Akt, Erk2, and IKK Is Required for Its Transcriptional Activity. Mol Cell. 2017 Aug 03; 67(3):484-497.e5. PMID: 28689659.
      View in: PubMed
    3. Uranga CC, Ghassemian M, Hernández-Martínez R. Data from proteome analysis of Lasiodiplodia theobromae (Botryosphaeriaceae). Data Brief. 2017 Aug; 13:124-128. PMID: 28580409.
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    4. Uranga CC, Ghassemian M, Hernández-Martínez R. Novel proteins from proteomic analysis of the trunk disease fungus Lasiodiplodia theobromae (Botryosphaeriaceae). Biochim Open. 2017 Jun; 4:88-98. PMID: 29450146.
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    5. Davis S, Wang J, Zhu M, Stahmer K, Lakshminarayan R, Ghassemian M, Jiang Y, Miller EA, Ferro-Novick S. Sec24 phosphorylation regulates autophagosome abundance during nutrient deprivation. Elife. 2016 11 18; 5. PMID: 27855785.
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    6. Mangas I, Radic Z, Taylor P, Ghassemian M, Candela H, Vilanova E, Estévez J. Butyrylcholinesterase identification in a phenylvalerate esterase-enriched fraction sensitive to low mipafox concentrations in chicken brain. Arch Toxicol. 2017 Feb; 91(2):909-919. PMID: 26838044.
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    7. Engineer CB, Ghassemian M, Anderson JC, Peck SC, Hu H, Schroeder JI. Corrigendum: Carbonic anhydrases, EPF2 and a novel protease mediate CO2 control of stomatal development. Nature. 2015 Oct 15; 526(7573):458. PMID: 26287465.
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    8. Brunn ND, Dibrov SM, Kao MB, Ghassemian M, Hermann T. Analysis of mRNA recognition by human thymidylate synthase. Biosci Rep. 2014 Dec 23; 34(6):e00168. PMID: 25423174; PMCID: PMC4274661.
    9. Gaffney PM, Imai DM, Clifford DL, Ghassemian M, Sasik R, Chang AN, O'Brien TD, Coppinger J, Trejo M, Masliah E, Munson L, Sigurdson C. Proteomic analysis of highly prevalent amyloid A amyloidosis endemic to endangered island foxes. PLoS One. 2014; 9(11):e113765. PMID: 25429466; PMCID: PMC4245998.
    10. Gaffney PM, Barr B, Rowe JD, Bett C, Drygiannakis I, Giannitti F, Trejo M, Ghassemian M, Martin P, Masliah E, Sigurdson CJ. Protein profiling of isolated uterine AA amyloidosis causing fetal death in goats. FASEB J. 2015 Mar; 29(3):911-9. PMID: 25422367.
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    11. Engineer CB, Ghassemian M, Anderson JC, Peck SC, Hu H, Schroeder JI. Carbonic anhydrases, EPF2 and a novel protease mediate CO2 control of stomatal development. Nature. 2014 Sep 11; 513(7517):246-50. PMID: 25043023; PMCID: PMC4274335.
    12. Jean C, Chen XL, Nam JO, Tancioni I, Uryu S, Lawson C, Ward KK, Walsh CT, Miller NL, Ghassemian M, Turowski P, Dejana E, Weis S, Cheresh DA, Schlaepfer DD. Inhibition of endothelial FAK activity prevents tumor metastasis by enhancing barrier function. J Cell Biol. 2014 Jan 20; 204(2):247-63. PMID: 24446483; PMCID: PMC3897185.
    13. Meyer JG, Kim S, Maltby DA, Ghassemian M, Bandeira N, Komives EA. Expanding proteome coverage with orthogonal-specificity a-lytic proteases. Mol Cell Proteomics. 2014 Mar; 13(3):823-35. PMID: 24425750; PMCID: PMC3945911.
    14. Stalder D, Mizuno-Yamasaki E, Ghassemian M, Novick PJ. Phosphorylation of the Rab exchange factor Sec2p directs a switch in regulatory binding partners. Proc Natl Acad Sci U S A. 2013 Dec 10; 110(50):19995-20002. PMID: 24248333; PMCID: PMC3864272.
    15. Zhang W, Tan W, Wu X, Poustovoitov M, Strasner A, Li W, Borcherding N, Ghassemian M, Karin M. A NIK-IKKa module expands ErbB2-induced tumor-initiating cells by stimulating nuclear export of p27/Kip1. Cancer Cell. 2013 May 13; 23(5):647-59. PMID: 23602409; PMCID: PMC3981467.
    16. Gamez A, Mukerjea R, Alayyoubi M, Ghassemian M, Ghosh P. Structure and interactions of the cytoplasmic domain of the Yersinia type III secretion protein YscD. J Bacteriol. 2012 Nov; 194(21):5949-58. PMID: 22942247; PMCID: PMC3486071.
    17. Tomar A, Lawson C, Ghassemian M, Schlaepfer DD. Cortactin as a target for FAK in the regulation of focal adhesion dynamics. PLoS One. 2012; 7(8):e44041. PMID: 22952866; PMCID: PMC3430618.
    18. Brandt B, Brodsky DE, Xue S, Negi J, Iba K, Kangasjärvi J, Ghassemian M, Stephan AB, Hu H, Schroeder JI. Reconstitution of abscisic acid activation of SLAC1 anion channel by CPK6 and OST1 kinases and branched ABI1 PP2C phosphatase action. Proc Natl Acad Sci U S A. 2012 Jun 26; 109(26):10593-8. PMID: 22689970; PMCID: PMC3387046.
    19. Guo L, Ghassemian M, Komives EA, Russell P. Cadmium-induced proteome remodeling regulated by Spc1/Sty1 and Zip1 in fission yeast. Toxicol Sci. 2012 Sep; 129(1):200-12. PMID: 22610605; PMCID: PMC3713068.
    20. Sheikh F, Ouyang K, Campbell SG, Lyon RC, Chuang J, Fitzsimons D, Tangney J, Hidalgo CG, Chung CS, Cheng H, Dalton ND, Gu Y, Kasahara H, Ghassemian M, Omens JH, Peterson KL, Granzier HL, Moss RL, McCulloch AD, Chen J. Mouse and computational models link Mlc2v dephosphorylation to altered myosin kinetics in early cardiac disease. J Clin Invest. 2012 Apr; 122(4):1209-21. PMID: 22426213; PMCID: PMC3314469.
    21. Lin C, Ear J, Pavlova Y, Mittal Y, Kufareva I, Ghassemian M, Abagyan R, Garcia-Marcos M, Ghosh P. Tyrosine phosphorylation of the Ga-interacting protein GIV promotes activation of phosphoinositide 3-kinase during cell migration. Sci Signal. 2011 Sep 27; 4(192):ra64. PMID: 21954290; PMCID: PMC4226136.
    22. Lord C, Bhandari D, Menon S, Ghassemian M, Nycz D, Hay J, Ghosh P, Ferro-Novick S. Sequential interactions with Sec23 control the direction of vesicle traffic. Nature. 2011 May 12; 473(7346):181-6. PMID: 21532587; PMCID: PMC3093450.
    23. Bruand J, Sistla S, Mériaux C, Dorrestein PC, Gaasterland T, Ghassemian M, Wisztorski M, Fournier I, Salzet M, Macagno E, Bafna V. Automated querying and identification of novel peptides using MALDI mass spectrometric imaging. J Proteome Res. 2011 Apr 01; 10(4):1915-28. PMID: 21332220; PMCID: PMC4845900.
    24. Guttman M, Betts GN, Barnes H, Ghassemian M, van der Geer P, Komives EA. Interactions of the NPXY microdomains of the low density lipoprotein receptor-related protein 1. Proteomics. 2009 Nov; 9(22):5016-28. PMID: 19771558; PMCID: PMC2862490.
    25. Ng J, Bandeira N, Liu WT, Ghassemian M, Simmons TL, Gerwick WH, Linington R, Dorrestein PC, Pevzner PA. Dereplication and de novo sequencing of nonribosomal peptides. Nat Methods. 2009 Aug; 6(8):596-9. PMID: 19597502; PMCID: PMC2754211.
    26. Ghassemian M, Lutes J, Chang HS, Lange I, Chen W, Zhu T, Wang X, Lange BM. Abscisic acid-induced modulation of metabolic and redox control pathways in Arabidopsis thaliana. Phytochemistry. 2008 Dec; 69(17):2899-911. PMID: 19007950.
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    27. Warnecke F, Luginbühl P, Ivanova N, Ghassemian M, Richardson TH, Stege JT, Cayouette M, McHardy AC, Djordjevic G, Aboushadi N, Sorek R, Tringe SG, Podar M, Martin HG, Kunin V, Dalevi D, Madejska J, Kirton E, Platt D, Szeto E, Salamov A, Barry K, Mikhailova N, Kyrpides NC, Matson EG, Ottesen EA, Zhang X, Hernández M, Murillo C, Acosta LG, Rigoutsos I, Tamayo G, Green BD, Chang C, Rubin EM, Mathur EJ, Robertson DE, Hugenholtz P, Leadbetter JR. Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite. Nature. 2007 Nov 22; 450(7169):560-5. PMID: 18033299.
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    28. Ghassemian M, Lutes J, Tepperman JM, Chang HS, Zhu T, Wang X, Quail PH, Lange BM. Integrative analysis of transcript and metabolite profiling data sets to evaluate the regulation of biochemical pathways during photomorphogenesis. Arch Biochem Biophys. 2006 Apr 15; 448(1-2):45-59. PMID: 16460663.
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    29. Lange BM, Ghassemian M. Comprehensive post-genomic data analysis approaches integrating biochemical pathway maps. Phytochemistry. 2005 Feb; 66(4):413-51. PMID: 15694451.
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    30. Lange BM, Ghassemian M. Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. Plant Mol Biol. 2003 Apr; 51(6):925-48. PMID: 12777052.
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