Thomas Whisenant

Title(s)	CMPTL AND DATA SCI RSCH SPEC 4, Medicine
School	Vc-health Sciences-schools
Address	9500 Gilman Drive # La Jolla CA 92093
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Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

Detection and targeting of splicing deregulation in pediatric acute myeloid leukemia stem cells. Cell Rep Med. 2023 03 21; 4(3):100962. van der Werf I, Mondala PK, Steel SK, Balaian L, Ladel L, Mason CN, Diep RH, Pham J, Cloos J, Kaspers GJL, Chan WC, Mark A, La Clair JJ, Wentworth P, Fisch KM, Crews LA, Whisenant TC, Burkart MD, Donohoe ME, Jamieson CHM. PMID: 36889320; PMCID: PMC10040387.

View in: PubMed Mentions: 5 Fields:
Med Medicine (General)
Translation:Humans Cells
Reversal of malignant ADAR1 splice isoform switching with Rebecsinib. Cell Stem Cell. 2023 03 02; 30(3):250-263.e6. Crews LA, Ma W, Ladel L, Pham J, Balaian L, Steel SK, Mondala PK, Diep RH, Wu CN, Mason CN, van der Werf I, Oliver I, Reynoso E, Pineda G, Whisenant TC, Wentworth P, La Clair JJ, Jiang Q, Burkart MD, Jamieson CHM. PMID: 36803553; PMCID: PMC10134781.

View in: PubMed Mentions: 6 Fields:
Cel Cell Biology
Translation:Animals Cells
Neuronal activity-driven O-GlcNAcylation promotes mitochondrial plasticity. bioRxiv. 2023 Jan 11. Yu SB, Sanchez RG, Papich ZD, Whisenant TC, Ghassemian M, Koberstein JN, Stewart ML, Pekkurnaz G. PMID: 36711626; PMCID: PMC9882081.

View in: PubMed Mentions:
Organic Anion Transporters (OAT) and Other SLC22 Transporters in Progression of Renal Cell Carcinoma. Cancers (Basel). 2022 Sep 29; 14(19). Whisenant TC, Nigam SK. PMID: 36230695; PMCID: PMC9563088.

View in: PubMed Mentions: 4
Prediction of Liver Transplant Rejection With a Biologically Relevant Gene Expression Signature. Transplantation. 2022 05 01; 106(5):1004-1011. Levitsky J, Kandpal M, Guo K, Zhao L, Kurian S, Whisenant T, Abecassis M. PMID: 34342962; PMCID: PMC9301991.

View in: PubMed Mentions: 4 Fields:
Tra Transplantation
Translation:Humans Cells
Systems biology approaches in solid organ transplantation. Curr Opin Organ Transplant. 2021 02 01; 26(1):37-42. Kurian SM, Whisenant TC, Marsh CL. PMID: 33315768.

View in: PubMed Mentions: 1 Fields:
Tra Transplantation
Translation:Humans
Inflammation-driven deaminase deregulation fuels human pre-leukemia stem cell evolution. Cell Rep. 2021 01 26; 34(4):108670. Jiang Q, Isquith J, Ladel L, Mark A, Holm F, Mason C, He Y, Mondala P, Oliver I, Pham J, Ma W, Reynoso E, Ali S, Morris IJ, Diep R, Nasamran C, Xu G, Sasik R, Rosenthal SB, Birmingham A, Coso S, Pineda G, Crews L, Donohoe ME, Venter JC, Whisenant T, Mesa RA, Alexandrov LB, Fisch KM, Jamieson C. PMID: 33503434; PMCID: PMC8477897.

View in: PubMed Mentions: 12 Fields:
Cel Cell Biology Mol Molecular Biology
Translation:Humans Cells
Toward Improved and Standardized Diagnostic Pipelines in Transplantation. Transplantation. 2021 01 01; 105(1):12-13. Kurian SM, Whisenant TC, Marsh CL. PMID: 33350625.

View in: PubMed Mentions: 1 Fields:
Tra Transplantation
Translation:Humans
BAL Cell Gene Expression in Severe Asthma Reveals Mechanisms of Severe Disease and Influences of Medications. Am J Respir Crit Care Med. 2019 10 01; 200(7):837-856. Weathington N, O'Brien ME, Radder J, Whisenant TC, Bleecker ER, Busse WW, Erzurum SC, Gaston B, Hastie AT, Jarjour NN, Meyers DA, Milosevic J, Moore WC, Tedrow JR, Trudeau JB, Wong HP, Wu W, Kaminski N, Wenzel SE, Modena BD. PMID: 31161938; PMCID: PMC6812436.

View in: PubMed Mentions: 26 Fields:
Cri Critical Care Pul Pulmonary Medicine
Translation:Humans Cells
Irreversible Electroporation Combined with Checkpoint Blockade and TLR7 Stimulation Induces Antitumor Immunity in a Murine Pancreatic Cancer Model. Cancer Immunol Res. 2019 10; 7(10):1714-1726. Narayanan JSS, Ray P, Hayashi T, Whisenant TC, Vicente D, Carson DA, Miller AM, Schoenberger SP, White RR. PMID: 31409607; PMCID: PMC6774877.

View in: PubMed Mentions: 46 Fields:
All Allergy and Immunology Neo Neoplasms
Translation:Animals Cells
Discovery and cross-validation of peripheral blood and renal biopsy gene expression signatures from ethnically diverse kidney transplant populations. Am J Transplant. 2019 12; 19(12):3356-3366. Ventura CG, Whisenant T, Gelbart T, David DSR, Agena F, Salomon DR, David-Neto E, Kurian SM. PMID: 31152474; PMCID: PMC6883121.

View in: PubMed Mentions: 3 Fields:
Tra Transplantation
Translation:Humans Cells
Oncogenic mutations in IKKβ function through global changes induced by K63-linked ubiquitination and result in autocrine stimulation. PLoS One. 2018; 13(10):e0206014. Meyer AN, Gallo LH, Ko J, Cardenas G, Nelson KN, Siari A, Campos AR, Whisenant TC, Donoghue DJ. PMID: 30335863; PMCID: PMC6193727.

View in: PubMed Mentions: 3 Fields:
Med Medicine (General)Sci Science
Translation:Humans Animals Cells
Development and clinical validity of a novel blood-based molecular biomarker for subclinical acute rejection following kidney transplant. Am J Transplant. 2019 01; 19(1):98-109. Friedewald JJ, Kurian SM, Heilman RL, Whisenant TC, Poggio ED, Marsh C, Baliga P, Odim J, Brown MM, Ikle DN, Armstrong BD, Charette JI, Brietigam SS, Sustento-Reodica N, Zhao L, Kandpal M, Salomon DR, Abecassis MM, Clinical Trials in Organ Transplantation 08 (CTOT-08). PMID: 29985559; PMCID: PMC6387870.

View in: PubMed Mentions: 41 Fields:
Tra Transplantation
Translation:Humans
Transcriptomic studies in tolerance: Lessons learned and the path forward. Hum Immunol. 2018 May; 79(5):395-401. Kurian SM, Whisenant TC, Mathew JM, Miller J, Leventhal JR. PMID: 29481826.

View in: PubMed Mentions: 2 Fields:
All Allergy and Immunology
Translation:Humans Animals
Biomarker Guidelines for High-Dimensional Genomic Studies in Transplantation: Adding Method to the Madness. Transplantation. 2017 03; 101(3):457-463. Kurian SM, Whisenant T, Mas V, Heilman R, Abecassis M, Salomon DR, Moss A, Kaplan B. PMID: 28212255.

View in: PubMed Mentions: 7 Fields:
Tra Transplantation
Translation:Humans
Gene expression profiling of U2AF2 dependent RNA-protein interactions during CD4 + T cell activation. Genom Data. 2017 Mar; 11:77-80. Whisenant TC. PMID: 28050347; PMCID: PMC5192059.

View in: PubMed Mentions: 2
Peripheral Blood Cell Gene Expression Diagnostic for Identifying Symptomatic Transthyretin Amyloidosis Patients: Male and Female Specific Signatures. Theranostics. 2016; 6(11):1792-809. Kurian SM, Novais M, Whisenant T, Gelbart T, Buxbaum JN, Kelly JW, Coelho T, Salomon DR. PMID: 27570551; PMCID: PMC4997237.

View in: PubMed Mentions: 12 Fields:
Dia Diagnostic Imaging Mol Molecular Biology Nan Nanotechnology The Therapeutics
Translation:Humans Cells
Genome-wide expression profiling in the peripheral blood of patients with fibromyalgia. Clin Exp Rheumatol. 2016 Mar-Apr; 34(2 Suppl 96):S89-98. Jones KD, Gelbart T, Whisenant TC, Waalen J, Mondala TS, Iklé DN, Salomon DR, Bennett RM, Kurian SM. PMID: 27157394; PMCID: PMC4888802.

View in: PubMed Mentions: 23 Fields:
Rhe Rheumatology
Translation:Humans Cells
The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells. PLoS One. 2015; 10(12):e0144409. Whisenant TC, Peralta ER, Aarreberg LD, Gao NJ, Head SR, Ordoukhanian P, Williamson JR, Salomon DR. PMID: 26641092; PMCID: PMC4671683.

View in: PubMed Mentions: 13 Fields:
Med Medicine (General)Sci Science
Translation:Humans Cells
Inflammasome activation by cystine crystals: implications for the pathogenesis of cystinosis. J Am Soc Nephrol. 2014 Jun; 25(6):1163-9. Prencipe G, Caiello I, Cherqui S, Whisenant T, Petrini S, Emma F, De Benedetti F. PMID: 24525029; PMCID: PMC4033370.

View in: PubMed Mentions: 44 Fields:
Nep Nephrology
Translation:Humans Animals Cells
Library construction for next-generation sequencing: overviews and challenges. Biotechniques. 2014; 56(2):61-4, 66, 68, passim. Head SR, Komori HK, LaMere SA, Whisenant T, Van Nieuwerburgh F, Salomon DR, Ordoukhanian P. PMID: 24502796; PMCID: PMC4351865.

View in: PubMed Mentions: 209 Fields:
Bio Biotechnology
Translation:Humans Animals Cells
Combining docking site and phosphosite predictions to find new substrates: identification of smoothelin-like-2 (SMTNL2) as a c-Jun N-terminal kinase (JNK) substrate. Cell Signal. 2013 Dec; 25(12):2518-29. Gordon EA, Whisenant TC, Zeller M, Kaake RM, Gordon WM, Krotee P, Patel V, Huang L, Baldi P, Bardwell L. PMID: 23981301; PMCID: PMC4132694.

View in: PubMed Mentions: 19 Fields:
Cel Cell Biology
Translation:Humans Animals Cells
Computational prediction and experimental verification of new MAP kinase docking sites and substrates including Gli transcription factors. PLoS Comput Biol. 2010 Aug 26; 6(8). Whisenant TC, Ho DT, Benz RW, Rogers JS, Kaake RM, Gordon EA, Huang L, Baldi P, Bardwell L. PMID: 20865152; PMCID: PMC2928751.

View in: PubMed Mentions: 50 Fields:
Com Computational Biology
Translation:Humans Cells
A scalable and integrative system for pathway bioinformatics and systems biology. Adv Exp Med Biol. 2010; 680:523-34. Compani B, Su T, Chang I, Cheng J, Shah KH, Whisenant T, Dou Y, Bergmann A, Cheong R, Wold B, Bardwell L, Levchenko A, Baldi P, Mjolsness E. PMID: 20865537; PMCID: PMC3021415.

View in: PubMed Mentions: Fields:
Bio Biology Med Medicine (General)
Translation:Cells
Activation of murine CD4+ and CD8+ T lymphocytes leads to dramatic remodeling of N-linked glycans. J Immunol. 2006 Aug 15; 177(4):2431-40. Comelli EM, Sutton-Smith M, Yan Q, Amado M, Panico M, Gilmartin T, Whisenant T, Lanigan CM, Head SR, Goldberg D, Morris HR, Dell A, Paulson JC. PMID: 16888005.

View in: PubMed Mentions: 57 Fields:
All Allergy and Immunology
Translation:Animals Cells
A focused microarray approach to functional glycomics: transcriptional regulation of the glycome. Glycobiology. 2006 Feb; 16(2):117-31. Comelli EM, Head SR, Gilmartin T, Whisenant T, Haslam SM, North SJ, Wong NK, Kudo T, Narimatsu H, Esko JD, Drickamer K, Dell A, Paulson JC. PMID: 16237199.

View in: PubMed Mentions: 58 Fields:
Bio Biochemistry
Translation:Humans Animals Cells
De novo kidney transplantation without use of calcineurin inhibitors preserves renal structure and function at two years. Am J Transplant. 2004 Nov; 4(11):1776-85. Flechner SM, Kurian SM, Solez K, Cook DJ, Burke JT, Rollin H, Hammond JA, Whisenant T, Lanigan CM, Head SR, Salomon DR. PMID: 15476476.

View in: PubMed Mentions: 52 Fields:
Tra Transplantation
Translation:Humans CTClinical Trials
Kidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytes. Am J Transplant. 2004 Sep; 4(9):1475-89. Flechner SM, Kurian SM, Head SR, Sharp SM, Whisenant TC, Zhang J, Chismar JD, Horvath S, Mondala T, Gilmartin T, Cook DJ, Kay SA, Walker JR, Salomon DR. PMID: 15307835; PMCID: PMC2041877.

View in: PubMed Mentions: 114 Fields:
Tra Transplantation
Translation:Humans Cells
Expression patterns of alpha 2,3-sialyltransferases and alpha 1,3-fucosyltransferases determine the mode of sialyl Lewis X inhibition by disaccharide decoys. J Biol Chem. 2003 Jun 27; 278(26):23352-9. Brown JR, Fuster MM, Whisenant T, Esko JD. PMID: 12686549.

View in: PubMed Mentions: 15 Fields:
Bio Biochemistry
Translation:Humans Cells