Xinlian Zhang

Title(s)	Assistant Professor In Residence, Herbert Wertheim School of Public Health & Human Longevity Science
School	Vc-health Sciences-schools
Address	9500 Gilman Drive # La Jolla CA 92093
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Bibliographic

selected publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

The fecal mycobiome in non-alcoholic fatty liver disease. J Hepatol. 2022 04; 76(4):788-799. Demir M, Lang S, Hartmann P, Duan Y, Martin A, Miyamoto Y, Bondareva M, Zhang X, Wang Y, Kasper P, Bang C, Roderburg C, Tacke F, Steffen HM, Goeser T, Kruglov A, Eckmann L, Stärkel P, Fouts DE, Schnabl B. PMID: 34896404; PMCID: PMC8981795.

View in: PubMed Mentions: 73 Fields:
Gas Gastroenterology
Translation:Humans Animals
Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder. Front Physiol. 2021; 12:699253. Hartmann P, Lang S, Zeng S, Duan Y, Zhang X, Wang Y, Bondareva M, Kruglov A, Fouts DE, Stärkel P, Schnabl B. PMID: 34349667; PMCID: PMC8327211.

View in: PubMed Mentions: 42
Relation of prior statin and anti-hypertensive use to severity of disease among patients hospitalized with COVID-19: Findings from the American Heart Association's COVID-19 Cardiovascular Disease Registry. PLoS One. 2021; 16(7):e0254635. Daniels LB, Ren J, Kumar K, Bui QM, Zhang J, Zhang X, Sawan MA, Eisen H, Longhurst CA, Messer K. PMID: 34264974; PMCID: PMC8281996.

View in: PubMed Mentions: 26 Fields:
Med Medicine (General)Sci Science
Translation:Humans
A semiparametric model for between-subject attributes: Applications to beta-diversity of microbiome data. Biometrics. 2022 09; 78(3):950-962. Liu J, Zhang X, Chen T, Wu T, Lin T, Jiang L, Lang S, Liu L, Natarajan L, Tu JX, Kosciolek T, Morton J, Nguyen TT, Schnabl B, Knight R, Feng C, Zhong Y, Tu XM. PMID: 34010477; PMCID: PMC8602427.

View in: PubMed Mentions: 6 Fields:
Sta Statistics as Topic
Translation:Humans
Combined analysis of gut microbiota, diet and PNPLA3 polymorphism in biopsy-proven non-alcoholic fatty liver disease. Liver Int. 2021 07; 41(7):1576-1591. Lang S, Martin A, Zhang X, Farowski F, Wisplinghoff H, J G T Vehreschild M, Krawczyk M, Nowag A, Kretzschmar A, Scholz C, Kasper P, Roderburg C, Mohr R, Lammert F, Tacke F, Schnabl B, Goeser T, Steffen HM, Demir M. PMID: 33896117; PMCID: PMC8947846.

View in: PubMed Mentions: 15 Fields:
Gas Gastroenterology
Translation:Humans
Association of Loneliness and Wisdom With Gut Microbial Diversity and Composition: An Exploratory Study. Front Psychiatry. 2021; 12:648475. Nguyen TT, Zhang X, Wu TC, Liu J, Le C, Tu XM, Knight R, Jeste DV. PMID: 33841213; PMCID: PMC8029068.

View in: PubMed Mentions: 13
Coordinate regulation of systemic and kidney tryptophan metabolism by the drug transporters OAT1 and OAT3. J Biol Chem. 2021 Jan-Jun; 296:100575. Granados JC, Richelle A, Gutierrez JM, Zhang P, Zhang X, Bhatnagar V, Lewis NE, Nigam SK. PMID: 33757768; PMCID: PMC8102410.

View in: PubMed Mentions: 20 Fields:
Bio Biochemistry
Translation:Animals Cells
Dicer-like proteins influence Arabidopsis root microbiota independent of RNA-directed DNA methylation. Microbiome. 2021 02 26; 9(1):57. Kaushal R, Peng L, Singh SK, Zhang M, Zhang X, Vílchez JI, Wang Z, He D, Yang Y, Lv S, Xu Z, Morcillo RJL, Wang W, Huang W, Paré PW, Song CP, Zhu JK, Liu R, Zhong W, Ma P, Zhang H. PMID: 33637135; PMCID: PMC7913254.

View in: PubMed Mentions: 11 Fields:
Gen Genetics Mic Microbiology
Translation:Animals Cells
Fungi-Bacteria Correlation in Alcoholic Hepatitis Patients. Toxins (Basel). 2021 02 14; 13(2). Gao B, Zhang X, Schnabl B. PMID: 33672887; PMCID: PMC7917833.

View in: PubMed Mentions: 10 Fields:
Tox Toxicology
Translation:Humans Animals Cells
Intestinal Virome in Patients With Alcoholic Hepatitis. Hepatology. 2020 12; 72(6):2182-2196. Jiang L, Lang S, Duan Y, Zhang X, Gao B, Chopyk J, Schwanemann LK, Ventura-Cots M, Bataller R, Bosques-Padilla F, Verna EC, Abraldes JG, Brown RS, Vargas V, Altamirano J, Caballería J, Shawcross DL, Ho SB, Louvet A, Lucey MR, Mathurin P, Garcia-Tsao G, Kisseleva T, Brenner DA, Tu XM, Stärkel P, Pride D, Fouts DE, Schnabl B. PMID: 32654263; PMCID: PMC8159727.

View in: PubMed Mentions: 59 Fields:
Gas Gastroenterology
Translation:Humans Animals Cells
Rods Contribute to Visual Behavior in Larval Zebrafish. Invest Ophthalmol Vis Sci. 2020 10 01; 61(12):11. Venkatraman P, Mills-Henry I, Padmanabhan KR, Pascuzzi P, Hassan M, Zhang J, Zhang X, Ma P, Pang CP, Dowling JE, Zhang M, Leung YF. PMID: 33049059; PMCID: PMC7571310.

View in: PubMed Mentions: 12 Fields:
Oph Ophthalmology
Translation:Animals Cells
Strength of immune selection in tumors varies with sex and age. Nat Commun. 2020 08 17; 11(1):4128. Castro A, Pyke RM, Zhang X, Thompson WK, Day CP, Alexandrov LB, Zanetti M, Carter H. PMID: 32807809; PMCID: PMC7431859.

View in: PubMed Mentions: 56 Fields:
Bio Biology Sci Science
Translation:Humans
Changes in the fecal bacterial microbiota associated with disease severity in alcoholic hepatitis patients. Gut Microbes. 2020 11 09; 12(1):1785251. Lang S, Fairfied B, Gao B, Duan Y, Zhang X, Fouts DE, Schnabl B. PMID: 32684075; PMCID: PMC7524371.

View in: PubMed Mentions: 47 Fields:
Gas Gastroenterology Mic Microbiology
Translation:Humans Cells
Intestinal Virome Signature Associated With Severity of Nonalcoholic Fatty Liver Disease. Gastroenterology. 2020 11; 159(5):1839-1852. Lang S, Demir M, Martin A, Jiang L, Zhang X, Duan Y, Gao B, Wisplinghoff H, Kasper P, Roderburg C, Tacke F, Steffen HM, Goeser T, Abraldes JG, Tu XM, Loomba R, Stärkel P, Pride D, Fouts DE, Schnabl B. PMID: 32652145; PMCID: PMC8404510.

View in: PubMed Mentions: 86 Fields:
Gas Gastroenterology
Translation:Humans
METHYLTRANSFERASE1 and Ripening Modulate Vivipary during Tomato Fruit Development. Plant Physiol. 2020 08; 183(4):1883-1897. Yao M, Chen W, Kong J, Zhang X, Shi N, Zhong S, Ma P, Gallusci P, Jackson S, Liu Y, Hong Y. PMID: 32503901; PMCID: PMC7401104.

View in: PubMed Mentions: 11 Fields:
Phy Physiology
Translation:Animals Cells
Foxtail mosaic virus-induced flowering assays in monocot crops. J Exp Bot. 2020 05 30; 71(10):3012-3023. Yuan C, Li H, Qin C, Zhang X, Chen Q, Zhang P, Xu X, He M, Zhang X, Tör M, Xue D, Wang H, Jackson S, He Y, Liu Y, Shi N, Hong Y. PMID: 32061090.

View in: PubMed Mentions: 5 Fields:
Bot Botany
Translation:Animals Cells
Molecular and functional characterization of the SBP-box transcription factor SPL-CNR in tomato fruit ripening and cell death. J Exp Bot. 2020 05 30; 71(10):2995-3011. Lai T, Wang X, Ye B, Jin M, Chen W, Wang Y, Zhou Y, Blanks AM, Gu M, Zhang P, Zhang X, Li C, Wang H, Liu Y, Gallusci P, Tör M, Hong Y. PMID: 32016417; PMCID: PMC7260717.

View in: PubMed Mentions: 17 Fields:
Bot Botany
MHC-I genotype and tumor mutational burden predict response to immunotherapy. Genome Med. 2020 05 19; 12(1):45. Goodman AM, Castro A, Pyke RM, Okamura R, Kato S, Riviere P, Frampton G, Sokol E, Zhang X, Ball ED, Carter H, Kurzrock R. PMID: 32430031; PMCID: PMC7236948.

View in: PubMed Mentions: 58 Fields:
Gen Genetics
Translation:Humans
An RNAi suppressor activates in planta virus-mediated gene editing. Funct Integr Genomics. 2020 Jul; 20(4):471-477. Zhang X, Kang L, Zhang Q, Meng Q, Pan Y, Yu Z, Shi N, Jackson S, Zhang X, Wang H, Tor M, Hong Y. PMID: 31848794.

View in: PubMed Mentions: 11 Fields:
Gen Genetics Mol Molecular Biology
Translation:Animals Cells
Normalization of large-scale behavioural data collected from zebrafish. PLoS One. 2019; 14(2):e0212234. Xie R, Zhang M, Venkatraman P, Zhang X, Zhang G, Carmer R, Kantola SA, Pang CP, Ma P, Zhang M, Zhong W, Leung YF. PMID: 30768618; PMCID: PMC6377122.

View in: PubMed Mentions: 5 Fields:
Med Medicine (General)Sci Science
Translation:Animals
Mini review: Revisiting mobile RNA silencing in plants. Plant Sci. 2019 Jan; 278:113-117. Zhang X, Lai T, Zhang P, Zhang X, Yuan C, Jin Z, Li H, Yu Z, Qin C, Tör M, Ma P, Cheng Q, Hong Y. PMID: 30471724; PMCID: PMC6556431.

View in: PubMed Mentions: 27 Fields:
Bot Botany
Translation:Animals
SIRT5 as a biomarker for response to anthracycline-taxane-based neoadjuvant chemotherapy in triple-negative breast cancer. Oncol Rep. 2018 May; 39(5):2315-2323. Xu L, Che X, Wu Y, Song N, Shi S, Wang S, Li C, Zhang L, Zhang X, Qu X, Teng Y. PMID: 29565454.

View in: PubMed Mentions: 18 Fields:
Neo Neoplasms
Translation:Humans Cells CTClinical Trials
Statistical Leveraging Methods in Big Data. Handbook of Big Data Analytics. 2018; 51-74. Zhang X., Xie R., Ma P. View Publication.
Expression profiling of the retina of pde6c, a zebrafish model of retinal degeneration. Sci Data. 2017 12 12; 4:170182. Zhang L, Zhang X, Zhang G, Pang CP, Leung YF, Zhang M, Zhong W. PMID: 29231925; PMCID: PMC5726315.

View in: PubMed Mentions: 6 Fields:
Sci Science
Translation:Animals Cells
The Helicase Aquarius/EMB-4 Is Required to Overcome Intronic Barriers to Allow Nuclear RNAi Pathways to Heritably Silence Transcription. Dev Cell. 2017 08 07; 42(3):241-255.e6. Akay A, Di Domenico T, Suen KM, Nabih A, Parada GE, Larance M, Medhi R, Berkyurek AC, Zhang X, Wedeles CJ, Rudolph KLM, Engelhardt J, Hemberg M, Ma P, Lamond AI, Claycomb JM, Miska EA. PMID: 28787591; PMCID: PMC5554785.

View in: PubMed Mentions: 30 Fields:
Cel Cell Biology Emb Embryology