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A machine learning framework to adjust for learning effects in medical device safety evaluation. J Am Med Inform Assoc. 2024 Oct 29.
Koola JD, Ramesh K, Mao J, Ahn M, Davis SE, Govindarajulu U, Perkins AM, Westerman D, Ssemaganda H, Speroff T, Ohno-Machado L, Ramsay CR, Sedrakyan A, Resnic FS, Matheny ME. PMID: 39471493.
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PubMed Mentions: Fields:
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A primer for quantum computing and its applications to healthcare and biomedical research. J Am Med Inform Assoc. 2024 Aug 01; 31(8):1774-1784.
Durant TJS, Knight E, Nelson B, Dudgeon S, Lee SJ, Walliman D, Young HP, Ohno-Machado L, Schulz WL. PMID: 38934288; PMCID: PMC11258415.
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PubMed Mentions: Fields:
Translation:
Humans
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Me-LLaMA: Foundation Large Language Models for Medical Applications. Res Sq. 2024 May 22.
Xie Q, Chen Q, Chen A, Peng C, Hu Y, Lin F, Peng X, Huang J, Zhang J, Keloth V, Zhou X, He H, Ohno-Machado L, Wu Y, Xu H, Bian J. PMID: 38826372; PMCID: PMC11142305.
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PubMed Mentions:
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Biomedical blockchain with practical implementations and quantitative evaluations: a systematic review. J Am Med Inform Assoc. 2024 May 20; 31(6):1423-1435.
Lacson R, Yu Y, Kuo TT, Ohno-Machado L. PMID: 38726710; PMCID: PMC11105130.
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PubMed Mentions:
2 Fields:
Translation:
Humans
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JAMIA at 30: looking back and forward. J Am Med Inform Assoc. 2023 12 22; 31(1):1-9.
Stead WW, Miller RA, Ohno-Machado L, Bakken S. PMID: 38134400; PMCID: PMC10746314.
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PubMed Mentions:
2 Fields:
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Guiding Principles to Address the Impact of Algorithm Bias on Racial and Ethnic Disparities in Health and Health Care. JAMA Netw Open. 2023 12 01; 6(12):e2345050.
Chin MH, Afsar-Manesh N, Bierman AS, Chang C, Colón-Rodríguez CJ, Dullabh P, Duran DG, Fair M, Hernandez-Boussard T, Hightower M, Jain A, Jordan WB, Konya S, Moore RH, Moore TT, Rodriguez R, Shaheen G, Snyder LP, Srinivasan M, Umscheid CA, Ohno-Machado L. PMID: 38100101; PMCID: PMC11181958.
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PubMed Mentions:
16 Fields:
Translation:
Humans
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Severe aortic stenosis detection by deep learning applied to echocardiography. Eur Heart J. 2023 11 14; 44(43):4592-4604.
Holste G, Oikonomou EK, Mortazavi BJ, Coppi A, Faridi KF, Miller EJ, Forrest JK, McNamara RL, Ohno-Machado L, Yuan N, Gupta A, Ouyang D, Krumholz HM, Wang Z, Khera R. PMID: 37611002; PMCID: PMC11004929.
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PubMed Mentions:
16 Fields:
Translation:
Humans
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Examining sociodemographic correlates of opioid use, misuse, and use disorders in the All of Us Research Program. PLoS One. 2023; 18(8):e0290416.
Yeh HH, Peltz-Rauchman C, Johnson CC, Pawloski PA, Chesla D, Waring SC, Stevens AB, Epstein M, Joseph C, Miller-Matero LR, Gui H, Tang A, Boerwinkle E, Cicek M, Clark CR, Cohn E, Gebo K, Loperena R, Mayo K, Mockrin S, Ohno-Machado L, Schully S, Ramirez AH, Qian J, Ahmedani BK. PMID: 37594966; PMCID: PMC10437856.
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PubMed Mentions: Fields:
Translation:
Humans
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Family and personal history of cancer in the All of Us research program for precision medicine. PLoS One. 2023; 18(7):e0288496.
Keeler Bruce L, Paul P, Kim KK, Kim J, Keegan THM, Hiatt RA, Ohno-Machado L, All of Us Research Program Investigators. PMID: 37459328; PMCID: PMC10351738.
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PubMed Mentions: Fields:
Translation:
Humans
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Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. J Am Med Inform Assoc. 2023 05 19; 30(6):1167-1178.
Kuo TT, Pham A, Edelson ME, Kim J, Chan J, Gupta Y, Ohno-Machado L, R2D2 Consortium. PMID: 36916740; PMCID: PMC10198529.
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PubMed Mentions:
6 Fields:
Translation:
Humans
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Patient and researcher stakeholder preferences for use of electronic health record data: a qualitative study to guide the design and development of a platform to honor patient preferences. J Am Med Inform Assoc. 2023 May 04.
Morse B, Kim KK, Xu Z, Matsumoto CG, Schilling LM, Ohno-Machado L, Mak SS, Keller MS. PMID: 37141581; PMCID: PMC10198527.
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PubMed Mentions:
2 Fields:
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Common and rare variants associated with cardiometabolic traits across 98,622 whole-genome sequences in the All of Us research program. J Hum Genet. 2023 Aug; 68(8):565-570.
Wang X, Ryu J, Kim J, Ramirez A, Mayo KR, All of Us Research Program, Condon H, Vaitinadin NS, Ohno-Machado L, Talavera GA, Ellinor PT, Lubitz SA, Choi SH. PMID: 37072623; PMCID: PMC10524735.
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PubMed Mentions:
4 Fields:
Translation:
Humans
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Simulating complex patient populations with hierarchical learning effects to support methods development for post-market surveillance. BMC Med Res Methodol. 2023 04 11; 23(1):89.
Davis SE, Ssemaganda H, Koola JD, Mao J, Westerman D, Speroff T, Govindarajulu US, Ramsay CR, Sedrakyan A, Ohno-Machado L, Resnic FS, Matheny ME. PMID: 37041457; PMCID: PMC10088292.
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PubMed Mentions: Fields:
Translation:
Humans
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A hierarchical strategy to minimize privacy risk when linking "De-identified" data in biomedical research consortia. J Biomed Inform. 2023 03; 139:104322.
Ohno-Machado L, Jiang X, Kuo TT, Tao S, Chen L, Ram PM, Zhang GQ, Xu H. PMID: 36806328; PMCID: PMC10975485.
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PubMed Mentions: Fields:
Translation:
Humans
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Evaluation of available risk scores to predict multiple cardiovascular complications for patients with type 2 diabetes mellitus using electronic health records. Comput Methods Programs Biomed Update. 2023; 3.
Ho JC, Staimez LR, Narayan KMV, Ohno-Machado L, Simpson RL, Hertzberg VS. PMID: 37332899; PMCID: PMC10274317.
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PubMed Mentions:
2
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Achieving a Representative Sample of Asian Americans in Biomedical Research Through Community-Based Approaches: Comparing Demographic Data in the All of Us Research Program With the American Community Survey. J Transcult Nurs. 2023 01; 34(1):59-67.
Randal FT, Lozano P, Qi S, Maene C, Shah S, Mo Y, Ratsimbazafy F, Boerwinkle E, Cicek M, Clark CR, Cohn E, Gebo K, Loperena R, Mayo K, Mockrin S, Ohno-Machado L, Schully S, Ramirez AH, Aschebrook-Kilfoy B, Ahsan H, Lam H, Kim KE. PMID: 36398985.
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PubMed Mentions:
1 Fields:
Translation:
Humans
-
Investigation of hypertension and type 2 diabetes as risk factors for dementia in the All of Us cohort. Sci Rep. 2022 11 17; 12(1):19797.
Nagar SD, Pemu P, Qian J, Boerwinkle E, Cicek M, Clark CR, Cohn E, Gebo K, Loperena R, Mayo K, Mockrin S, Ohno-Machado L, Ramirez AH, Schully S, Able A, Green A, Zuchner S, SEEC Consortium, Jordan IK, Meller R. PMID: 36396674; PMCID: PMC9672061.
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PubMed Mentions:
5 Fields:
Translation:
Humans
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The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition. J Am Med Inform Assoc. 2022 11 14; 29(12):2182-2190.
Kuo TT, Jiang X, Tang H, Wang X, Harmanci A, Kim M, Post K, Bu D, Bath T, Kim J, Liu W, Chen H, Ohno-Machado L. PMID: 36164820; PMCID: PMC9667175.
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PubMed Mentions:
4 Fields:
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Comparative Safety and Effectiveness of Biologic Therapy for Crohn's Disease: A CA-IBD Cohort Study. Clin Gastroenterol Hepatol. 2023 08; 21(9):2359-2369.e5.
Singh S, Kim J, Luo J, Paul P, Rudrapatna V, Park S, Zheng K, Syal G, Ha C, Fleshner P, McGovern D, Sauk JS, Limketkai B, Dulai PS, Boland BS, Eisenstein S, Ramamoorthy S, Melmed G, Mahadevan U, Sandborn WJ, Ohno-Machado L. PMID: 36343846.
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PubMed Mentions:
12 Fields:
Translation:
Humans
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Concordance of SARS-CoV-2 Antibody Results during a Period of Low Prevalence. mSphere. 2022 Oct 26; 7(5):e0025722.
Miller CN, Althoff KN, Schlueter DJ, Anton-Culver H, Chen Q, Garbett S, Ratsimbazafy F, Thomsen I, Karlson EW, Cicek M, Pinto LA, Malin BA, Ohno-Machado L, Williams C, Goldstein D, Kouame A, Ramirez A, Gebo KA, Schully SD, All of Us Research Program. PMID: 36173112; PMCID: PMC9599436.
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PubMed Mentions: Fields:
Translation:
HumansCells
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An Overview of Cancer in the First 315,000 All of Us Participants. PLoS One. 2022; 17(9):e0272522.
Aschebrook-Kilfoy B, Zakin P, Craver A, Shah S, Kibriya MG, Stepniak E, Ramirez A, Clark C, Cohn E, Ohno-Machado L, Cicek M, Boerwinkle E, Schully SD, Mockrin S, Gebo K, Mayo K, Ratsimbazafy F, Sanders A, Shah RC, Argos M, Ho J, Kim K, Daviglus M, Greenland P, Ahsan H, All of Us Research Program Investigators. PMID: 36048778; PMCID: PMC9436122.
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PubMed Mentions:
4 Fields:
Translation:
Humans
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The All of Us Research Program: Data quality, utility, and diversity. Patterns (N Y). 2022 Aug 12; 3(8):100570.
Ramirez AH, Sulieman L, Schlueter DJ, Halvorson A, Qian J, Ratsimbazafy F, Loperena R, Mayo K, Basford M, Deflaux N, Muthuraman KN, Natarajan K, Kho A, Xu H, Wilkins C, Anton-Culver H, Boerwinkle E, Cicek M, Clark CR, Cohn E, Ohno-Machado L, Schully SD, Ahmedani BK, Argos M, Cronin RM, O'Donnell C, Fouad M, Goldstein DB, Greenland P, Hebbring SJ, Karlson EW, Khatri P, Korf B, Smoller JW, Sodeke S, Wilbanks J, Hentges J, Mockrin S, Lunt C, Devaney SA, Gebo K, Denny JC, Carroll RJ, Glazer D, Harris PA, Hripcsak G, Philippakis A, Roden DM, All of Us Research Program. PMID: 36033590; PMCID: PMC9403360.
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PubMed Mentions:
84
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A research agenda to support the development and implementation of genomics-based clinical informatics tools and resources. J Am Med Inform Assoc. 2022 07 12; 29(8):1342-1349.
Wiley K, Findley L, Goldrich M, Rakhra-Burris TK, Stevens A, Williams P, Bult CJ, Chisholm R, Deverka P, Ginsburg GS, Green ED, Jarvik G, Mensah GA, Ramos E, Relling MV, Roden DM, Rowley R, Alterovitz G, Aronson S, Bastarache L, Cimino JJ, Crowgey EL, Del Fiol G, Freimuth RR, Hoffman MA, Jeff J, Johnson K, Kawamoto K, Madhavan S, Mendonca EA, Ohno-Machado L, Pratap S, Taylor CO, Ritchie MD, Walton N, Weng C, Zayas-Cabán T, Manolio TA, Williams MS. PMID: 35485600; PMCID: PMC9277642.
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PubMed Mentions:
3 Fields:
Translation:
Humans
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Inclusion of social determinants of health improves sepsis readmission prediction models. J Am Med Inform Assoc. 2022 06 14; 29(7):1263-1270.
Amrollahi F, Shashikumar SP, Meier A, Ohno-Machado L, Nemati S, Wardi G. PMID: 35511233; PMCID: PMC9196687.
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PubMed Mentions:
10 Fields:
Translation:
Humans
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Simplified Machine Learning Models Can Accurately Identify High-Need High-Cost Patients With Inflammatory Bowel Disease. Clin Transl Gastroenterol. 2022 07 01; 13(7):e00507.
Nguyen NH, Patel S, Gabunilas J, Qian AS, Cecil A, Jairath V, Sandborn WJ, Ohno-Machado L, Chen PL, Singh S. PMID: 35905414; PMCID: PMC10476830.
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PubMed Mentions:
1 Fields:
Translation:
Humans
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Effect of Obesity on Risk of Hospitalization, Surgery, and Serious Infection in Biologic-Treated Patients With Inflammatory Bowel Diseases: A CA-IBD Cohort Study. Am J Gastroenterol. 2022 10 01; 117(10):1639-1647.
Gu P, Luo J, Kim J, Paul P, Limketkai B, Sauk JS, Park S, Parekh N, Zheng K, Rudrapatna V, Syal G, Ha C, McGovern DP, Melmed GY, Fleshner P, Eisenstein S, Ramamoorthy S, Dulai PS, Boland BS, Grunvald E, Mahadevan U, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 35973139.
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PubMed Mentions:
5 Fields:
Translation:
Humans
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Effectiveness and Safety of Biologic Therapy in Hispanic Vs Non-Hispanic Patients With Inflammatory Bowel Diseases: A CA-IBD Cohort Study. Clin Gastroenterol Hepatol. 2023 01; 21(1):173-181.e5.
Nguyen NH, Luo J, Paul P, Kim J, Syal G, Ha C, Rudrapatna V, Park S, Parekh N, Zheng K, Sauk JS, Limketkai B, Fleshner P, Eisenstein S, Ramamoorthy S, Melmed G, Dulai PS, Boland BS, Mahadevan U, Sandborn WJ, Ohno-Machado L, McGovern D, Singh S. PMID: 35644340; PMCID: PMC9701245.
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PubMed Mentions:
4 Fields:
Translation:
Humans
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Codesigning a community-based participatory research project to assess tribal perspectives on privacy and health data sharing: A report from the Strong Heart Study. J Am Med Inform Assoc. 2022 05 11; 29(6):1120-1127.
Triplett C, Fletcher BJ, Taitingfong RI, Zhang Y, Ali T, Ohno-Machado L, Bloss CS. PMID: 35349678; PMCID: PMC9093024.
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PubMed Mentions:
1 Fields:
Translation:
Humans
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NLM's sponsorship of research in biomedical informatics (1985-2016). Inf Serv Use. 2022; 42(1):61-70.
Kuo TT, Ohno-Machado L. PMID: 35600120; PMCID: PMC9108565.
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PubMed Mentions:
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A tribute to Karen Greenwood and her contributions to the American Medical Informatics Association. J Am Med Inform Assoc. 2022 04 13; 29(5):1011-1013.
Lehmann CU, Brennan PF, Detmer DE, Jackson GP, Ohno-Machado L, Safran C, Williamson JJ, Shortliffe EH. PMID: 35303086; PMCID: PMC9006698.
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PubMed Mentions:
1 Fields:
Translation:
Humans
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Epidemiology of atrial fibrillation in the All of Us Research Program. PLoS One. 2022; 17(3):e0265498.
Alonso A, Alam AB, Kamel H, Subbian V, Qian J, Boerwinkle E, Cicek M, Clark CR, Cohn EG, Gebo KA, Loperena-Cortes R, Mayo KR, Mockrin S, Ohno-Machado L, Schully SD, Ramirez AH, Greenland P. PMID: 35294480; PMCID: PMC8926244.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
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Machine Learning-based Prediction Models for Diagnosis and Prognosis in Inflammatory Bowel Diseases: A Systematic Review. J Crohns Colitis. 2022 Mar 14; 16(3):398-413.
Nguyen NH, Picetti D, Dulai PS, Jairath V, Sandborn WJ, Ohno-Machado L, Chen PL, Singh S. PMID: 34492100; PMCID: PMC8919806.
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PubMed Mentions:
10 Fields:
Translation:
Humans
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Antibodies to Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in All of Us Research Program Participants, 2 January to 18 March 2020. Clin Infect Dis. 2022 03 01; 74(4):584-590.
Althoff KN, Schlueter DJ, Anton-Culver H, Cherry J, Denny JC, Thomsen I, Karlson EW, Havers FP, Cicek MS, Thibodeau SN, Pinto LA, Lowy D, Malin BA, Ohno-Machado L, Williams C, Goldstein D, Kouame A, Ramirez A, Roman A, Sharpless NE, Gebo KA, Schully SD. PMID: 34128970; PMCID: PMC8384413.
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PubMed Mentions:
17 Fields:
Translation:
HumansCells
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Protein and miRNA profile of circulating extracellular vesicles in patients with primary sclerosing cholangitis. Sci Rep. 2022 02 22; 12(1):3027.
Povero D, Tameda M, Eguchi A, Ren W, Kim J, Myers R, Goodman ZD, Harrison SA, Sanyal AJ, Bosch J, Ohno-Machado L, Feldstein AE. PMID: 35194091; PMCID: PMC8863778.
View in:
PubMed Mentions:
6 Fields:
Translation:
HumansCells
-
NLM's Sponsorship of Research in Biomedical Informatics (1985-2016). Stud Health Technol Inform. 2022 Feb 01; 288:64-73.
Kuo TT, Ohno-Machado L. PMID: 35102829.
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PubMed Mentions: Fields:
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Digital Health Technologies for Remote Monitoring and Management of Inflammatory Bowel Disease: A Systematic Review. Am J Gastroenterol. 2022 01 01; 117(1):78-97.
Nguyen NH, Martinez I, Atreja A, Sitapati AM, Sandborn WJ, Ohno-Machado L, Singh S. PMID: 34751673; PMCID: PMC8987011.
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PubMed Mentions:
13 Fields:
Translation:
Humans
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Pediatric data from the All of Us research program: demonstration of pediatric obesity over time. JAMIA Open. 2021 Oct; 4(4):ooab112.
Giangreco NP, Lina S, Qian J, Kuoame A, Subbian V, Boerwinkle E, Cicek M, Clark CR, Cohen E, Gebo KA, Loperena-Cortes R, Mayo K, Mockrin S, Ohno-Machado L, Schully SD, Tatonetti NP, Ramirez AH. PMID: 35155998; PMCID: PMC8827025.
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PubMed Mentions:
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Geographic Variation in Obesity at the State Level in the All of Us Research Program. Prev Chronic Dis. 2021 12 23; 18:E104.
Clark CR, Chandler PD, Zhou G, Noel N, Achilike C, Mendez L, O'Connor GT, Smoller JW, Weiss ST, Murphy SN, Ommerborn MJ, Karnes JH, Klimentidis YC, Jordan CD, Hiatt RA, Ramirez AH, Loperena R, Mayo K, Cohn E, Ohno-Machado L, Boerwinkle E, Cicek M, Schully SD, Mockrin S, Gebo KA, Karlson EW. PMID: 34941480; PMCID: PMC8718125.
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PubMed Mentions:
3 Fields:
Translation:
Humans
-
Ultrafast homomorphic encryption models enable secure outsourcing of genotype imputation. Cell Syst. 2021 11 17; 12(11):1108-1120.e4.
Kim M, Harmanci AO, Bossuat JP, Carpov S, Cheon JH, Chillotti I, Cho W, Froelicher D, Gama N, Georgieva M, Hong S, Hubaux JP, Kim D, Lauter K, Ma Y, Ohno-Machado L, Sofia H, Son Y, Song Y, Troncoso-Pastoriza J, Jiang X. PMID: 34464590; PMCID: PMC9898842.
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PubMed Mentions:
20 Fields:
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Benchmarking blockchain-based gene-drug interaction data sharing methods: A case study from the iDASH 2019 secure genome analysis competition blockchain track. Int J Med Inform. 2021 10; 154:104559.
Kuo TT, Bath T, Ma S, Pattengale N, Yang M, Cao Y, Hudson CM, Kim J, Post K, Xiong L, Ohno-Machado L. PMID: 34474309; PMCID: PMC9933142.
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PubMed Mentions:
5 Fields:
Translation:
Humans
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Racial, ethnic, and gender differences in obesity and body fat distribution: An All of Us Research Program demonstration project. PLoS One. 2021; 16(8):e0255583.
Karnes JH, Arora A, Feng J, Steiner HE, Sulieman L, Boerwinkle E, Clark C, Cicek M, Cohn E, Gebo K, Loperena-Cortes R, Ohno-Machado L, Mayo K, Mockrin S, Ramirez A, Schully S, Klimentidis YC. PMID: 34358277; PMCID: PMC8345840.
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PubMed Mentions:
14 Fields:
Translation:
Humans
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Privacy-protecting, reliable response data discovery using COVID-19 patient observations. J Am Med Inform Assoc. 2021 07 30; 28(8):1765-1776.
Kim J, Neumann L, Paul P, Day ME, Aratow M, Bell DS, Doctor JN, Hinske LC, Jiang X, Kim KK, Matheny ME, Meeker D, Pletcher MJ, Schilling LM, SooHoo S, Xu H, Zheng K, Ohno-Machado L, R2D2 Consortium. PMID: 34051088; PMCID: PMC8194878.
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PubMed Mentions:
5 Fields:
Translation:
Humans
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Hypertension prevalence in the All of Us Research Program among groups traditionally underrepresented in medical research. Sci Rep. 2021 06 22; 11(1):12849.
Chandler PD, Clark CR, Zhou G, Noel NL, Achilike C, Mendez L, Ramirez AH, Loperena-Cortes R, Mayo K, Cohn E, Ohno-Machado L, Boerwinkle E, Cicek M, Qian J, Schully S, Ratsimbazafy F, Mockrin S, Gebo K, Dedier JJ, Murphy SN, Smoller JW, Karlson EW, All of Us Research Program Investigators. PMID: 34158555; PMCID: PMC8219813.
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PubMed Mentions:
3 Fields:
Translation:
Humans
-
Burden and Outcomes of Fragmentation of Care in Hospitalized Patients With Inflammatory Bowel Diseases: A Nationally Representative Cohort. Inflamm Bowel Dis. 2021 06 15; 27(7):1026-1034.
Nguyen NH, Luo J, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 32944753; PMCID: PMC8205632.
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PubMed Mentions:
2 Fields:
Translation:
Humans
-
National Estimates of Financial Hardship From Medical Bills and Cost-related Medication Nonadherence in Patients With Inflammatory Bowel Diseases in the United States. Inflamm Bowel Dis. 2021 06 15; 27(7):1068-1078.
Nguyen NH, Khera R, Dulai PS, Boland BS, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 33051681; PMCID: PMC8205631.
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PubMed Mentions:
6 Fields:
Translation:
Humans
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VERTIcal Grid lOgistic regression with Confidence Intervals (VERTIGO-CI). AMIA Jt Summits Transl Sci Proc. 2021; 2021:355-364.
Kim J, Li W, Bath T, Jiang X, Ohno-Machado L. PMID: 34457150; PMCID: PMC8378611.
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PubMed Mentions:
2 Translation:
Humans
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Calibrating predictive model estimates in a distributed network of patient data. J Biomed Inform. 2021 05; 117:103758.
Huang Y, Jiang X, Gabriel RA, Ohno-Machado L. PMID: 33811986.
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PubMed Mentions:
3 Fields:
Translation:
Humans
-
How do we share data in COVID-19 research? A systematic review of COVID-19 datasets in PubMed Central Articles. Brief Bioinform. 2021 03 22; 22(2):800-811.
Zuo X, Chen Y, Ohno-Machado L, Xu H. PMID: 33757278; PMCID: PMC7799277.
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PubMed Mentions:
12 Fields:
Translation:
HumansCells
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Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers. J Am Med Inform Assoc. 2021 02 15; 28(2):393-401.
Madhavan S, Bastarache L, Brown JS, Butte AJ, Dorr DA, Embi PJ, Friedman CP, Johnson KB, Moore JH, Kohane IS, Payne PRO, Tenenbaum JD, Weiner MG, Wilcox AB, Ohno-Machado L. PMID: 33260207; PMCID: PMC7665546.
View in:
PubMed Mentions:
30 Fields:
Translation:
HumansPHPublic Health
-
Predictive Analytics for Glaucoma Using Data From the All of Us Research Program. Am J Ophthalmol. 2021 07; 227:74-86.
Baxter SL, Saseendrakumar BR, Paul P, Kim J, Bonomi L, Kuo TT, Loperena R, Ratsimbazafy F, Boerwinkle E, Cicek M, Clark CR, Cohn E, Gebo K, Mayo K, Mockrin S, Schully SD, Ramirez A, Ohno-Machado L, All of Us Research Program Investigators. PMID: 33497675; PMCID: PMC8184631.
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PubMed Mentions:
22 Fields:
Translation:
Humans
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A systematic literature review of Native American and Pacific Islanders' perspectives on health data privacy in the United States. J Am Med Inform Assoc. 2020 12 09; 27(12):1987-1998.
Taitingfong R, Bloss CS, Triplett C, Cakici J, Garrison N, Cole S, Stoner JA, Ohno-Machado L. PMID: 33063114; PMCID: PMC7727344.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
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Privacy-Protecting, Reliable Response Data Discovery Using COVID-19 Patient Observations. medRxiv. 2020 Sep 23.
Kim J, Neumann L, Paul P, Aratow M, Bell DS, Doctor JN, Hinske LC, Jiang X, Kim KK, Matheny ME, Meeker D, Pletcher MJ, Schilling LM, SooHoo S, Xu H, Zheng K, Ohno-Machado L. PMID: 32995818; PMCID: PMC7523159.
View in:
PubMed Mentions:
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Frailty Is Independently Associated with Mortality and Readmission in Hospitalized Patients with Inflammatory Bowel Diseases. Clin Gastroenterol Hepatol. 2021 10; 19(10):2054-2063.e14.
Qian AS, Nguyen NH, Elia J, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 32801013; PMCID: PMC7930013.
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PubMed Mentions:
29 Fields:
Translation:
Humans
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Coronavirus: indexed data speed up solutions. Nature. 2020 08; 584(7820):192.
Ohno-Machado L, Xu H. PMID: 32782375.
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PubMed Mentions:
1 Fields:
Translation:
HumansCellsPHPublic Health
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iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching. BMC Med Genomics. 2020 07 21; 13(Suppl 7):98.
Kuo TT, Jiang X, Tang H, Wang X, Bath T, Bu D, Wang L, Harmanci A, Zhang S, Zhi D, Sofia HJ, Ohno-Machado L. PMID: 32693816; PMCID: PMC7372776.
View in:
PubMed Mentions:
14 Fields:
Translation:
Humans
-
COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes. J Am Med Inform Assoc. 2020 07 01; 27(9):1437-1442.
Dong X, Li J, Soysal E, Bian J, DuVall SL, Hanchrow E, Liu H, Lynch KE, Matheny M, Natarajan K, Ohno-Machado L, Pakhomov S, Reeves RM, Sitapati AM, Abhyankar S, Cullen T, Deckard J, Jiang X, Murphy R, Xu H. PMID: 32569358; PMCID: PMC7337837.
View in:
PubMed Mentions:
8 Fields:
Translation:
HumansCellsPHPublic Health
-
Privacy challenges and research opportunities for genomic data sharing. Nat Genet. 2020 07; 52(7):646-654.
Bonomi L, Huang Y, Ohno-Machado L. PMID: 32601475; PMCID: PMC7761157.
View in:
PubMed Mentions:
65 Fields:
Translation:
Humans
-
Comprehensive characterization of hepatocyte-derived extracellular vesicles identifies direct miRNA-based regulation of hepatic stellate cells and DAMP-based hepatic macrophage IL-1β and IL-17 upregulation in alcoholic hepatitis mice. J Mol Med (Berl). 2020 07; 98(7):1021-1034.
Eguchi A, Yan R, Pan SQ, Wu R, Kim J, Chen Y, Ansong C, Smith RD, Tempaku M, Ohno-Machado L, Takei Y, Feldstein AE, Tsukamoto H. PMID: 32556367; PMCID: PMC7810220.
View in:
PubMed Mentions:
27 Fields:
Translation:
HumansAnimalsCells
-
Efficient determination of equivalence for encrypted data. Comput Secur. 2020 Oct; 97.
Doctor JN, Vaidya J, Jiang X, Wang S, Schilling LM, Ong T, Matheny ME, Ohno-Machado L, Meeker D. PMID: 33223585; PMCID: PMC7676425.
View in:
PubMed Mentions:
-
Prevalence and Effects of Food Insecurity and Social Support on Financial Toxicity in and Healthcare Use by Patients With Inflammatory Bowel Diseases. Clin Gastroenterol Hepatol. 2021 07; 19(7):1377-1386.e5.
Nguyen NH, Khera R, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 32526341; PMCID: PMC7987215.
View in:
PubMed Mentions:
16 Fields:
Translation:
Humans
-
EXpectation Propagation LOgistic REgRession on permissioned blockCHAIN (ExplorerChain): decentralized online healthcare/genomics predictive model learning. J Am Med Inform Assoc. 2020 05 01; 27(5):747-756.
Kuo TT, Gabriel RA, Cidambi KR, Ohno-Machado L. PMID: 32364235; PMCID: PMC7309256.
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PubMed Mentions:
22 Fields:
Translation:
Humans
-
VERTICOX: Vertically Distributed Cox Proportional Hazards Model Using the Alternating Direction Method of Multipliers. IEEE Trans Knowl Data Eng. 2022 Feb; 34(2):996-1010.
Dai W, Jiang X, Bonomi L, Li Y, Xiong H, Ohno-Machado L. PMID: 36158636; PMCID: PMC9491599.
View in:
PubMed Mentions:
6
-
Active Surveillance of the Implantable Cardioverter-Defibrillator Registry for Defibrillator Lead Failures. Circ Cardiovasc Qual Outcomes. 2020 04; 13(4):e006105.
Resnic FS, Majithia A, Dhruva SS, Ssemaganda H, Robbins S, Marinac-Dabic D, Hewitt K, Ohno-Machado L, Reynolds MR, Matheny ME. PMID: 32283971; PMCID: PMC7360169.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
A tutorial on calibration measurements and calibration models for clinical prediction models. J Am Med Inform Assoc. 2020 04 01; 27(4):621-633.
Huang Y, Li W, Macheret F, Gabriel RA, Ohno-Machado L. PMID: 32106284; PMCID: PMC7075534.
View in:
PubMed Mentions:
118 Fields:
Translation:
Humans
-
Engaging heart failure patients from a clinical data research network: A survey on willingness to participate in different types of research. AMIA Annu Symp Proc. 2019; 2019:305-312.
Choi YK, López JE, Meeker D, Ohno-Machado L, Kim KK, pSCANNER Team. PMID: 32308823; PMCID: PMC7153117.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Protecting patient privacy in survival analyses. J Am Med Inform Assoc. 2020 03 01; 27(3):366-375.
Bonomi L, Jiang X, Ohno-Machado L. PMID: 31750926; PMCID: PMC7025359.
View in:
PubMed Mentions:
10 Fields:
Translation:
Humans
-
Promoting Quality Face-to-Face Communication during Ophthalmology Encounters in the Electronic Health Record Era. Appl Clin Inform. 2020 01; 11(1):130-141.
Baxter SL, Gali HE, Chiang MF, Hribar MR, Ohno-Machado L, El-Kareh R, Huang AE, Chen HE, Camp AS, Kikkawa DO, Korn BS, Lee JE, Longhurst CA, Millen M. PMID: 32074650; PMCID: PMC7030957.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
-
The Data Tags Suite (DATS) model for discovering data access and use requirements. Gigascience. 2020 02 01; 9(2).
Alter G, Gonzalez-Beltran A, Ohno-Machado L, Rocca-Serra P. PMID: 32031623; PMCID: PMC7006671.
View in:
PubMed Mentions:
4 Fields:
-
Patient Perspectives About Decisions to Share Medical Data and Biospecimens for Research. JAMA Netw Open. 2019 08 02; 2(8):e199550.
Kim J, Kim H, Bell E, Bath T, Paul P, Pham A, Jiang X, Zheng K, Ohno-Machado L. PMID: 31433479; PMCID: PMC6707015.
View in:
PubMed Mentions:
38 Fields:
Translation:
Humans
-
Machine Learning-Based Predictive Modeling of Surgical Intervention in Glaucoma Using Systemic Data From Electronic Health Records. Am J Ophthalmol. 2019 12; 208:30-40.
Baxter SL, Marks C, Kuo TT, Ohno-Machado L, Weinreb RN. PMID: 31323204; PMCID: PMC6888922.
View in:
PubMed Mentions:
27 Fields:
Translation:
Humans
-
Impact of Electronic Health Record Implementation on Ophthalmology Trainee Time Expenditures. J Acad Ophthalmol (2017). 2019 Jul; 11(2):e65-e72.
Gali HE, Baxter SL, Lander L, Huang AE, Millen M, El-Kareh R, Nudleman E, Chao DL, Robbins SL, Heichel CWD, Camp AS, Korn BS, Lee JE, Kikkawa DO, Longhurst CA, Chiang MF, Hribar MR, Ohno-Machado L. PMID: 33954272; PMCID: PMC8095731.
View in:
PubMed Mentions:
3
-
Evaluating and sharing global genetic ancestry in biomedical datasets. J Am Med Inform Assoc. 2019 05 01; 26(5):457-461.
Harismendy O, Kim J, Xu X, Ohno-Machado L. PMID: 30869786; PMCID: PMC6433181.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
-
Fair compute loads enabled by blockchain: sharing models by alternating client and server roles. J Am Med Inform Assoc. 2019 05 01; 26(5):392-403.
Kuo TT, Gabriel RA, Ohno-Machado L. PMID: 30892656; PMCID: PMC7787356.
View in:
PubMed Mentions:
22 Fields:
Translation:
Humans
-
Comparison of blockchain platforms: a systematic review and healthcare examples. J Am Med Inform Assoc. 2019 05 01; 26(5):462-478.
Kuo TT, Zavaleta Rojas H, Ohno-Machado L. PMID: 30907419; PMCID: PMC7787359.
View in:
PubMed Mentions:
44 Fields:
-
Time Requirements of Paper-Based Clinical Workflows and After-Hours Documentation in a Multispecialty Academic Ophthalmology Practice. Am J Ophthalmol. 2019 10; 206:161-167.
Baxter SL, Gali HE, Huang AE, Millen M, El-Kareh R, Nudleman E, Robbins SL, Heichel CWD, Camp AS, Korn BS, Lee JE, Kikkawa DO, Longhurst CA, Chiang MF, Hribar MR, Ohno-Machado L. PMID: 30910517; PMCID: PMC6755078.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Reflections on the journey of editing a scientific journal. J Am Med Inform Assoc. 2018 12 01; 25(12):1584-1585.
Ohno-Machado L. PMID: 30541126; PMCID: PMC7647172.
View in:
PubMed Mentions:
1 Fields:
-
Clinical informatics applications of medication reconciliation, decision support systems, and online portal patient-provider communications. J Am Med Inform Assoc. 2018 11 01; 25(11):1431.
Ohno-Machado L. PMID: 30380084; PMCID: PMC7646928.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
A Novel Stakeholder Engagement Approach for Patient-centered Outcomes Research. Med Care. 2018 10; 56 Suppl 10 Suppl 1:S41-S47.
Kim KK, Khodyakov D, Marie K, Taras H, Meeker D, Campos HO, Ohno-Machado L. PMID: 30074950; PMCID: PMC6143220.
View in:
PubMed Mentions:
21 Fields:
Translation:
Humans
-
Data science and artificial intelligence to improve clinical practice and research. J Am Med Inform Assoc. 2018 10 01; 25(10):1273.
Ohno-Machado L. PMID: 30312446; PMCID: PMC7646927.
View in:
PubMed Mentions:
4 Fields:
-
Obesity Is Independently Associated With Higher Annual Burden and Costs of Hospitalization in Patients With Inflammatory Bowel Diseases. Clin Gastroenterol Hepatol. 2019 03; 17(4):709-718.e7.
Nguyen NH, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 30012429.
View in:
PubMed Mentions:
19 Fields:
Translation:
Humans
-
Enhancing diversity to reduce health information disparities and build an evidence base for genomic medicine. Per Med. 2018 09; 15(5):403-412.
Hindorff LA, Bonham VL, Ohno-Machado L. PMID: 30209973; PMCID: PMC6287493.
View in:
PubMed Mentions:
22 Fields:
Translation:
Humans
-
Sharing data from electronic health records within, across, and beyond healthcare institutions: Current trends and perspectives. J Am Med Inform Assoc. 2018 09 01; 25(9):1113.
Ohno-Machado L. PMID: 30184157; PMCID: PMC7646901.
View in:
PubMed Mentions:
4 Fields:
-
Privacy Policy and Technology in Biomedical Data Science. Annu Rev Biomed Data Sci. 2018 Jul; 1:115-129.
Arellano AM, Dai W, Wang S, Jiang X, Ohno-Machado L. PMID: 31058261; PMCID: PMC6497413.
View in:
PubMed Mentions:
18 Fields:
-
View in:
PubMed Mentions:
14 Fields:
Translation:
Humans
-
A Scalable Privacy-preserving Data Generation Methodology for Exploratory Analysis. AMIA Annu Symp Proc. 2017; 2017:1695-1704.
Vaidya J, Shafiq B, Asani M, Adam N, Jiang X, Ohno-Machado L. PMID: 29854240; PMCID: PMC5977652.
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PubMed Mentions: Fields:
Translation:
Humans
-
Infections and Cardiovascular Complications are Common Causes for Hospitalization in Older Patients with Inflammatory Bowel Diseases. Inflamm Bowel Dis. 2018 03 19; 24(4):916-923.
Nguyen NH, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 29562273.
View in:
PubMed Mentions:
14 Fields:
Translation:
Humans
-
DataMed - an open source discovery index for finding biomedical datasets. J Am Med Inform Assoc. 2018 Mar 01; 25(3):300-308.
Chen X, Gururaj AE, Ozyurt B, Liu R, Soysal E, Cohen T, Tiryaki F, Li Y, Zong N, Jiang M, Rogith D, Salimi M, Kim HE, Rocca-Serra P, Gonzalez-Beltran A, Farcas C, Johnson T, Margolis R, Alter G, Sansone SA, Fore IM, Ohno-Machado L, Grethe JS, Xu H. PMID: 29346583; PMCID: PMC7378878.
View in:
PubMed Mentions:
17 Fields:
-
User needs analysis and usability assessment of DataMed - a biomedical data discovery index. J Am Med Inform Assoc. 2018 Mar 01; 25(3):337-344.
Dixit R, Rogith D, Narayana V, Salimi M, Gururaj A, Ohno-Machado L, Xu H, Johnson TR. PMID: 29202203; PMCID: PMC7378884.
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PubMed Mentions:
4 Fields:
-
Clinical research informatics: a growing subspecialization of biomedical informatics. J Am Med Inform Assoc. 2018 Mar 01; 25(3):223.
Ohno-Machado L. PMID: 31972028; PMCID: PMC7651919.
View in:
PubMed Mentions:
2 Fields:
-
Annual Burden and Costs of Hospitalization for High-Need, High-Cost Patients With Chronic Gastrointestinal and Liver Diseases. Clin Gastroenterol Hepatol. 2018 08; 16(8):1284-1292.e30.
Nguyen NH, Khera R, Ohno-Machado L, Sandborn WJ, Singh S. PMID: 29474966; PMCID: PMC6056327.
View in:
PubMed Mentions:
35 Fields:
Translation:
Humans
-
Perfectly Secure and Efficient Two-Party Electronic-Health-Record Linkage. IEEE Internet Comput. 2018 Mar-Apr; 22(2):32-41.
Chen F, Jiang X, Wang S, Schilling LM, Meeker D, Ong T, Matheny ME, Doctor JN, Ohno-Machado L, Vaidya J. PMID: 29867290; PMCID: PMC5983039.
View in:
PubMed Mentions:
8
-
Finding relevant biomedical datasets: the UC San Diego solution for the bioCADDIE Retrieval Challenge. Database (Oxford). 2018 01 01; 2018.
Wei W, Ji Z, He Y, Zhang K, Ha Y, Li Q, Ohno-Machado L. PMID: 29688374; PMCID: PMC5861401.
View in:
PubMed Mentions:
2 Fields:
-
Biomedical informatics and data science: evolving fields with significant overlap. J Am Med Inform Assoc. 2018 01 01; 25(1):2-3.
Brennan PF, Chiang MF, Ohno-Machado L. PMID: 29267964; PMCID: PMC7647135.
View in:
PubMed Mentions:
5 Fields:
-
Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies. Bioinformatics. 2017 Dec 01; 33(23):3716-3725.
Wang M, Ji Z, Wang S, Kim J, Yang H, Jiang X, Ohno-Machado L. PMID: 29036461; PMCID: PMC5860319.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
JAMIA is going green. J Am Med Inform Assoc. 2017 11 01; 24(6):1045.
Ohno-Machado L. PMID: 29016975; PMCID: PMC7651987.
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PubMed Mentions: Fields:
-
Blockchain distributed ledger technologies for biomedical and health care applications. J Am Med Inform Assoc. 2017 Nov 01; 24(6):1211-1220.
Kuo TT, Kim HE, Ohno-Machado L. PMID: 29016974; PMCID: PMC6080687.
View in:
PubMed Mentions:
147 Fields:
-
A community effort to protect genomic data sharing, collaboration and outsourcing. NPJ Genom Med. 2017; 2:33.
Wang S, Jiang X, Tang H, Wang X, Bu D, Carey K, Dyke SO, Fox D, Jiang C, Lauter K, Malin B, Sofia H, Telenti A, Wang L, Wang W, Ohno-Machado L. PMID: 29263842; PMCID: PMC5677972.
View in:
PubMed Mentions:
14
-
Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks. J Am Med Inform Assoc. 2017 Jul 01; 24(4):799-805.
Raisaro JL, Tramèr F, Ji Z, Bu D, Zhao Y, Carey K, Lloyd D, Sofia H, Baker D, Flicek P, Shringarpure S, Bustamante C, Wang S, Jiang X, Ohno-Machado L, Tang H, Wang X, Hubaux JP. PMID: 28339683; PMCID: PMC5881894.
View in:
PubMed Mentions:
36 Fields:
Translation:
Humans
-
Education of informatics professionals and development of electronic information resources for clinicians, patients, health scientists, and study participants. J Am Med Inform Assoc. 2017 07 01; 24(4):679.
Ohno-Machado L. PMID: 28927160; PMCID: PMC7651983.
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PubMed Mentions: Fields:
Translation:
Humans
-
DATS, the data tag suite to enable discoverability of datasets. Sci Data. 2017 06 06; 4:170059.
Sansone SA, Gonzalez-Beltran A, Rocca-Serra P, Alter G, Grethe JS, Xu H, Fore IM, Lyle J, Gururaj AE, Chen X, Kim HE, Zong N, Li Y, Liu R, Ozyurt IB, Ohno-Machado L. PMID: 28585923; PMCID: PMC5460592.
View in:
PubMed Mentions:
38 Fields:
-
Finding useful data across multiple biomedical data repositories using DataMed. Nat Genet. 2017 05 26; 49(6):816-819.
Ohno-Machado L, Sansone SA, Alter G, Fore I, Grethe J, Xu H, Gonzalez-Beltran A, Rocca-Serra P, Gururaj AE, Bell E, Soysal E, Zong N, Kim HE. PMID: 28546571; PMCID: PMC6460922.
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PubMed Mentions:
42 Fields:
Translation:
Humans
-
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop. J Biomed Inform. 2017 07; 71:49-57.
Jagodnik KM, Koplev S, Jenkins SL, Ohno-Machado L, Paten B, Schurer SC, Dumontier M, Verborgh R, Bui A, Ping P, McKenna NJ, Madduri R, Pillai A, Ma'ayan A. PMID: 28501646; PMCID: PMC5545976.
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PubMed Mentions:
16 Fields:
Translation:
Humans
-
A Predictive Model for Extended Postanesthesia Care Unit Length of Stay in Outpatient Surgeries. Anesth Analg. 2017 05; 124(5):1529-1536.
Gabriel RA, Waterman RS, Kim J, Ohno-Machado L. PMID: 28079580.
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PubMed Mentions:
9 Fields:
Translation:
Humans
-
A risk prediction score for acute kidney injury in the intensive care unit. Nephrol Dial Transplant. 2017 May 01; 32(5):814-822.
Malhotra R, Kashani KB, Macedo E, Kim J, Bouchard J, Wynn S, Li G, Ohno-Machado L, Mehta R. PMID: 28402551.
View in:
PubMed Mentions:
88 Fields:
Translation:
Humans
-
Advancing healthcare and biomedical research via new data-driven approaches. J Am Med Inform Assoc. 2017 05 01; 24(3):471.
Ohno-Machado L. PMID: 28403381; PMCID: PMC7651977.
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PubMed Mentions:
1 Fields:
Translation:
Humans
-
Electronic health records: usability and utilization by health care providers and patients. J Am Med Inform Assoc. 2017 04 01; 24(e1):e1.
Ohno-Machado L. PMID: 28395061; PMCID: PMC7651965.
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PubMed Mentions: Fields:
Translation:
Humans
-
PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. Bioinformatics. 2017 03 15; 33(6):871-878.
Chen F, Wang S, Jiang X, Ding S, Lu Y, Kim J, Sahinalp SC, Shimizu C, Burns JC, Wright VJ, Png E, Hibberd ML, Lloyd DD, Yang H, Telenti A, Bloss CS, Fox D, Lauter K, Ohno-Machado L. PMID: 28065902; PMCID: PMC5860394.
View in:
PubMed Mentions:
30 Fields:
Translation:
Humans
-
iCONCUR: informed consent for clinical data and bio-sample use for research. J Am Med Inform Assoc. 2017 03 01; 24(2):380-387.
Kim H, Bell E, Kim J, Sitapati A, Ramsdell J, Farcas C, Friedman D, Feupe SF, Ohno-Machado L. PMID: 27589942; PMCID: PMC5391727.
View in:
PubMed Mentions:
27 Fields:
Translation:
Humans
-
Health information technology and patient safety. J Am Med Inform Assoc. 2017 03 01; 24(2):243.
Ohno-Machado L. PMID: 28204518; PMCID: PMC7651963.
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PubMed Mentions:
1 Fields:
Translation:
Humans
-
Integrated precision medicine: the role of electronic health records in delivering personalized treatment. Wiley Interdiscip Rev Syst Biol Med. 2017 05; 9(3).
Sitapati A, Kim H, Berkovich B, Marmor R, Singh S, El-Kareh R, Clay B, Ohno-Machado L. PMID: 28207198; PMCID: PMC5400726.
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PubMed Mentions:
20 Fields:
Translation:
Humans
-
Feasibility of Representing Data from Published Nursing Research Using the OMOP Common Data Model. AMIA Annu Symp Proc. 2016; 2016:715-723.
Kim H, Choi J, Jang I, Quach J, Ohno-Machado L. PMID: 28269868; PMCID: PMC5333244.
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PubMed Mentions:
3 Fields:
Translation:
Humans
-
Ensembles of NLP Tools for Data Element Extraction from Clinical Notes. AMIA Annu Symp Proc. 2016; 2016:1880-1889.
Kuo TT, Rao P, Maehara C, Doan S, Chaparro JD, Day ME, Farcas C, Ohno-Machado L, Hsu CN. PMID: 28269947; PMCID: PMC5333200.
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PubMed Mentions:
10 Fields:
Translation:
Humans
-
Whole genome sequencing of an African American family highlights toll like receptor 6 variants in Kawasaki disease susceptibility. PLoS One. 2017; 12(2):e0170977.
Kim J, Shimizu C, Kingsmore SF, Veeraraghavan N, Levy E, Ribeiro Dos Santos AM, Yang H, Flatley J, Hoang LT, Hibberd ML, Tremoulet AH, Harismendy O, Ohno-Machado L, Burns JC. PMID: 28151979; PMCID: PMC5289527.
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PubMed Mentions:
8 Fields:
Translation:
Humans
-
Using health information technology for clinical decision support and predictive analytics. J Am Med Inform Assoc. 2017 01; 24(1):1.
Ohno-Machado L. PMID: 28039394; PMCID: PMC7654091.
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PubMed Mentions:
4 Fields:
-
Prerequisites for International Exchanges of Health Information for Record Research: Comparison of Australian, Austrian, Finnish, Swiss, and US Policies. Stud Health Technol Inform. 2017; 245:1312.
Suominen H, Müller H, Ohno-Machado L, Salanterä S, Schreier G, Hanlen L. PMID: 29295395.
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PubMed Mentions:
2 Fields:
Translation:
Humans
-
MiRIAD update: using alternative polyadenylation, protein interaction network analysis and additional species to enhance exploration of the role of intragenic miRNAs and their host genes. Database (Oxford). 2017 01 01; 2017.
Hinske LC, Dos Santos FRC, Ohara DT, Ohno-Machado L, Kreth S, Galante PAF. PMID: 29220447; PMCID: PMC5569676.
View in:
PubMed Mentions:
6 Fields:
Translation:
HumansAnimalsCells
-
A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge. Database (Oxford). 2017 01 01; 2017.
Cohen T, Roberts K, Gururaj AE, Chen X, Pournejati S, Alter G, Hersh WR, Demner-Fushman D, Ohno-Machado L, Xu H. PMID: 29220453; PMCID: PMC5737202.
View in:
PubMed Mentions:
20 Fields:
-
Extracellular vesicles released by hepatocytes from gastric infusion model of alcoholic liver disease contain a MicroRNA barcode that can be detected in blood. Hepatology. 2017 02; 65(2):475-490.
Eguchi A, Lazaro RG, Wang J, Kim J, Povero D, Willliams B, Ho SB, Stärkel P, Schnabl B, Ohno-Machado L, Tsukamoto H, Feldstein AE. PMID: 27639178; PMCID: PMC5407075.
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PubMed Mentions:
58 Fields:
Translation:
HumansAnimalsCells
-
Data-driven informatics tools targeting patients and providers. J Am Med Inform Assoc. 2016 11; 23(6):1039.
Ohno-Machado L, Editor-in-Chief. PMID: 27880716.
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PubMed Mentions: Fields:
Translation:
Humans
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Protecting genomic data analytics in the cloud: state of the art and opportunities. BMC Med Genomics. 2016 10 13; 9(1):63.
Tang H, Jiang X, Wang X, Wang S, Sofia H, Fox D, Lauter K, Malin B, Telenti A, Xiong L, Ohno-Machado L. PMID: 27733153; PMCID: PMC5062944.
View in:
PubMed Mentions:
15 Fields:
-
Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States. Ann N Y Acad Sci. 2017 01; 1387(1):73-83.
Wang S, Jiang X, Singh S, Marmor R, Bonomi L, Fox D, Dow M, Ohno-Machado L. PMID: 27681358; PMCID: PMC5266631.
View in:
PubMed Mentions:
28 Fields:
Translation:
Humans
-
Biospecimen Sharing Among Hispanic Women in a Safety-Net Clinic: Implications for the Precision Medicine Initiative. J Natl Cancer Inst. 2017 02; 109(2).
Nodora JN, Komenaka IK, Bouton ME, Ohno-Machado L, Schwab R, Kim HE, Farcas C, Perez G, Elena Martinez M. PMID: 27688295; PMCID: PMC5040829.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
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Building systems that change clinical practice and advance health sciences research. J Am Med Inform Assoc. 2016 Sep; 23(5):857.
Ohno-Machado L, Editor-in-Chief. PMID: 27562746.
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PubMed Mentions: Fields:
Translation:
Humans
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Secure Multi-pArty Computation Grid LOgistic REgression (SMAC-GLORE). BMC Med Inform Decis Mak. 2016 07 25; 16 Suppl 3:89.
Shi H, Jiang C, Dai W, Jiang X, Tang Y, Ohno-Machado L, Wang S. PMID: 27454168; PMCID: PMC4959358.
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PubMed Mentions:
22 Fields:
Translation:
Humans
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Finding Related Publications: Extending the Set of Terms Used to Assess Article Similarity. AMIA Jt Summits Transl Sci Proc. 2016; 2016:225-34.
Wei W, Marmor R, Singh S, Wang S, Demner-Fushman D, Kuo TT, Hsu CN, Ohno-Machado L. PMID: 27570676; PMCID: PMC5001748.
View in:
PubMed Mentions:
4
-
Building a Natural Language Processing Tool to Identify Patients With High Clinical Suspicion for Kawasaki Disease from Emergency Department Notes. Acad Emerg Med. 2016 05; 23(5):628-36.
Doan S, Maehara CK, Chaparro JD, Lu S, Liu R, Graham A, Berry E, Hsu CN, Kanegaye JT, Lloyd DD, Ohno-Machado L, Burns JC, Tremoulet AH, Pediatric Emergency Medicine Kawasaki Disease Research Group. PMID: 26826020; PMCID: PMC5031359.
View in:
PubMed Mentions:
24 Fields:
Translation:
Humans
-
Data and the clinical decision support loop. J Am Med Inform Assoc. 2016 Apr; 23(e1):e1.
Ohno-Machado L. PMID: 27071919; PMCID: PMC4954618.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Consensus Statement on Electronic Health Predictive Analytics: A Guiding Framework to Address Challenges. EGEMS (Wash DC). 2016; 4(1):1163.
Amarasingham R, Audet AM, Bates DW, Glenn Cohen I, Entwistle M, Escobar GJ, Liu V, Etheredge L, Lo B, Ohno-Machado L, Ram S, Saria S, Schilling LM, Shahi A, Stewart WF, Steyerberg EW, Xie B. PMID: 27141516; PMCID: PMC4837887.
View in:
PubMed Mentions:
28
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A message to the next generation of biomedical informatics professionals. J Am Med Inform Assoc. 2016 Mar; 23(2):241.
Ohno-Machado L. PMID: 26961493.
View in:
PubMed Mentions:
1 Fields:
-
Using informatics to engage patients and healthcare providers. J Am Med Inform Assoc. 2016 Jan; 23(1):1.
Ohno-Machado L. PMID: 26912536; PMCID: PMC7814919.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Splicing Express: a software suite for alternative splicing analysis using next-generation sequencing data. PeerJ. 2015; 3:e1419.
Kroll JE, Kim J, Ohno-Machado L, de Souza SJ. PMID: 26618088; PMCID: PMC4655094.
View in:
PubMed Mentions:
6 Fields:
-
VERTIcal Grid lOgistic regression (VERTIGO). J Am Med Inform Assoc. 2016 05; 23(3):570-9.
Li Y, Jiang X, Wang S, Xiong H, Ohno-Machado L. PMID: 26554428; PMCID: PMC4901373.
View in:
PubMed Mentions:
24 Fields:
-
Trends in biomedical informatics: automated topic analysis of JAMIA articles. J Am Med Inform Assoc. 2015 Nov; 22(6):1153-63.
Han D, Wang S, Jiang C, Jiang X, Kim HE, Sun J, Ohno-Machado L. PMID: 26555018; PMCID: PMC5009912.
View in:
PubMed Mentions:
8 Fields:
-
The differential associations of preexisting conditions with trauma-related outcomes in the presence of competing risks. Injury. 2016 Mar; 47(3):677-84.
Calvo RY, Lindsay SP, Edland SD, Macera CA, Wingard DL, Ohno-Machado L, Sise MJ. PMID: 26684173.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Mining electronic health record data: finding the gold nuggets. J Am Med Inform Assoc. 2015 Sep; 22(5):937.
Ohno-Machado L. PMID: 26330468.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Creating a Common Data Model for Comparative Effectiveness with the Observational Medical Outcomes Partnership. Appl Clin Inform. 2015; 6(3):536-47.
FitzHenry F, Resnic FS, Robbins SL, Denton J, Nookala L, Meeker D, Ohno-Machado L, Matheny ME. PMID: 26448797; PMCID: PMC4586341.
View in:
PubMed Mentions:
50 Fields:
Translation:
Humans
-
WebDISCO: a web service for distributed cox model learning without patient-level data sharing. J Am Med Inform Assoc. 2015 Nov; 22(6):1212-9.
Lu CL, Wang S, Ji Z, Wu Y, Xiong L, Jiang X, Ohno-Machado L. PMID: 26159465; PMCID: PMC5009917.
View in:
PubMed Mentions:
59 Fields:
Translation:
Humans
-
A system to build distributed multivariate models and manage disparate data sharing policies: implementation in the scalable national network for effectiveness research. J Am Med Inform Assoc. 2015 Nov; 22(6):1187-95.
Meeker D, Jiang X, Matheny ME, Farcas C, D'Arcy M, Pearlman L, Nookala L, Day ME, Kim KK, Kim H, Boxwala A, El-Kareh R, Kuo GM, Resnic FS, Kesselman C, Ohno-Machado L. PMID: 26142423; PMCID: PMC4639714.
View in:
PubMed Mentions:
8 Fields:
-
Tailoring informatics interventions to patients and healthcare providers. J Am Med Inform Assoc. 2015 Jul; 22(4):747.
Ohno-Machado L. PMID: 26116707.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
A journal's role in resource sharing and reproducibility. J Am Med Inform Assoc. 2015 May; 22(3):491.
Ohno-Machado L. PMID: 26048962.
View in:
PubMed Mentions:
1 Fields:
-
Comparison of consumers' views on electronic data sharing for healthcare and research. J Am Med Inform Assoc. 2015 Jul; 22(4):821-30.
Kim KK, Joseph JG, Ohno-Machado L. PMID: 25829461; PMCID: PMC5009901.
View in:
PubMed Mentions:
54 Fields:
Translation:
Humans
-
Ranking Medical Subject Headings using a factor graph model. AMIA Jt Summits Transl Sci Proc. 2015; 2015:56-63.
Wei W, Demner-Fushman D, Wang S, Jiang X, Ohno-Machado L. PMID: 26306236; PMCID: PMC4525219.
View in:
PubMed Mentions:
-
Alternative polyadenylation allows differential negative feedback of human miRNA miR-579 on its host gene ZFR. PLoS One. 2015; 10(3):e0121507.
Hinske LC, Galante PA, Limbeck E, Möhnle P, Parmigiani RB, Ohno-Machado L, Camargo AA, Kreth S. PMID: 25799583; PMCID: PMC4370670.
View in:
PubMed Mentions:
19 Fields:
Translation:
HumansCells
-
Grid multi-category response logistic models. BMC Med Inform Decis Mak. 2015 Feb 18; 15:10.
Wu Y, Jiang X, Wang S, Jiang W, Li P, Ohno-Machado L. PMID: 25886151; PMCID: PMC4342889.
View in:
PubMed Mentions:
10 Fields:
Translation:
Humans
-
Development of a web service for analysis in a distributed network. EGEMS (Wash DC). 2014; 2(1):1053.
Jiang X, Wu Y, Marsolo K, Ohno-Machado L. PMID: 25848586; PMCID: PMC4371401.
View in:
PubMed Mentions:
5
-
A community assessment of privacy preserving techniques for human genomes. BMC Med Inform Decis Mak. 2014; 14 Suppl 1:S1.
Jiang X, Zhao Y, Wang X, Malin B, Wang S, Ohno-Machado L, Tang H. PMID: 25521230; PMCID: PMC4290799.
View in:
PubMed Mentions:
26 Fields:
Translation:
Humans
-
Trends in publication of nursing informatics research. AMIA Annu Symp Proc. 2014; 2014:805-14.
Kim H, Ohno-Machado L, Oh J, Jiang X. PMID: 25954387; PMCID: PMC4419947.
View in:
PubMed Mentions:
2 Fields:
-
Sharing my health data: a survey of data sharing preferences of healthy individuals. AMIA Annu Symp Proc. 2014; 2014:1699-708.
Bell EA, Ohno-Machado L, Grando MA. PMID: 25954442; PMCID: PMC4419941.
View in:
PubMed Mentions:
26 Fields:
Translation:
Humans
-
Disseminating informatics knowledge and training the next generation of leaders. J Am Med Inform Assoc. 2014 Nov-Dec; 21(6):954-6.
Ohno-Machado L. PMID: 25301807; PMCID: PMC4215064.
View in:
PubMed Mentions: Fields:
-
Focusing on the patient: mHealth, social media, electronic health records, and decision support systems. J Am Med Inform Assoc. 2014 Nov-Dec; 21(6):953.
Ohno-Machado L. PMID: 25301806; PMCID: PMC4215063.
View in:
PubMed Mentions:
3 Fields:
-
Choosing blindly but wisely: differentially private solicitation of DNA datasets for disease marker discovery. J Am Med Inform Assoc. 2015 Jan; 22(1):100-8.
Zhao Y, Wang X, Jiang X, Ohno-Machado L, Tang H. PMID: 25352565; PMCID: PMC4433380.
View in:
PubMed Mentions:
9 Fields:
Translation:
Humans
-
Prediction of MicroRNA Precursors Using Parsimonious Feature Sets. Cancer Inform. 2014; 13(Suppl 1):95-102.
Stepanowsky P, Levy E, Kim J, Jiang X, Ohno-Machado L. PMID: 25392687; PMCID: PMC4216048.
View in:
PubMed Mentions:
1
-
miRIAD-integrating microRNA inter- and intragenic data. Database (Oxford). 2014; 2014.
Hinske LC, França GS, Torres HA, Ohara DT, Lopes-Ramos CM, Heyn J, Reis LF, Ohno-Machado L, Kreth S, Galante PA. PMID: 25288656; PMCID: PMC4186326.
View in:
PubMed Mentions:
55 Fields:
Translation:
HumansAnimals
-
Health IT and clinical decision support systems: human factors and successful adoption. J Am Med Inform Assoc. 2014 Oct; 21(e2):e180.
Ohno-Machado L. PMID: 25200586; PMCID: PMC4173189.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Structuring text and standardizing data for clinical and population health applications. J Am Med Inform Assoc. 2014 Sep-Oct; 21(5):763.
Ohno-Machado L. PMID: 25117592; PMCID: PMC4147604.
View in:
PubMed Mentions:
2 Fields:
-
"Big data" and the electronic health record. Yearb Med Inform. 2014 Aug 15; 9:97-104.
Ross MK, Wei W, Ohno-Machado L. PMID: 25123728; PMCID: PMC4287068.
View in:
PubMed Mentions:
62 Fields:
-
Networking the country to promote health and scientific discovery. J Am Med Inform Assoc. 2014 Jul-Aug; 21(4):575.
Ohno-Machado L. PMID: 24908676; PMCID: PMC4078300.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Big data in health care: using analytics to identify and manage high-risk and high-cost patients. Health Aff (Millwood). 2014 Jul; 33(7):1123-31.
Bates DW, Saria S, Ohno-Machado L, Shah A, Escobar G. PMID: 25006137.
View in:
PubMed Mentions:
238 Fields:
Translation:
Humans
-
Privacy preserving RBF kernel support vector machine. Biomed Res Int. 2014; 2014:827371.
Li H, Xiong L, Ohno-Machado L, Jiang X. PMID: 25013805; PMCID: PMC4071990.
View in:
PubMed Mentions:
7 Fields:
Translation:
Humans
-
MAGI: a Node.js web service for fast microRNA-Seq analysis in a GPU infrastructure. Bioinformatics. 2014 Oct; 30(19):2826-7.
Kim J, Levy E, Ferbrache A, Stepanowsky P, Farcas C, Wang S, Brunner S, Bath T, Wu Y, Ohno-Machado L. PMID: 24907367; PMCID: PMC4173015.
View in:
PubMed Mentions:
10 Fields:
-
Differentially private distributed logistic regression using private and public data. BMC Med Genomics. 2014; 7 Suppl 1:S14.
Ji Z, Jiang X, Wang S, Xiong L, Ohno-Machado L. PMID: 25079786; PMCID: PMC4101668.
View in:
PubMed Mentions:
11 Fields:
Translation:
Humans
-
GAMUT: GPU accelerated microRNA analysis to uncover target genes through CUDA-miRanda. BMC Med Genomics. 2014; 7 Suppl 1:S9.
Wang S, Kim J, Jiang X, Brunner SF, Ohno-Machado L. PMID: 25077821; PMCID: PMC4101446.
View in:
PubMed Mentions:
11 Fields:
Translation:
Humans
-
pSCANNER: patient-centered Scalable National Network for Effectiveness Research. J Am Med Inform Assoc. 2014 Jul-Aug; 21(4):621-6.
Ohno-Machado L, Agha Z, Bell DS, Dahm L, Day ME, Doctor JN, Gabriel D, Kahlon MK, Kim KK, Hogarth M, Matheny ME, Meeker D, Nebeker JR, pSCANNER team. PMID: 24780722; PMCID: PMC4078293.
View in:
PubMed Mentions:
54 Fields:
Translation:
Humans
-
Detecting Inappropriate Access to Electronic Health Records Using Collaborative Filtering. Mach Learn. 2014 Apr 01; 95(1):87-101.
Menon AK, Jiang X, Kim J, Vaidya J, Ohno-Machado L. PMID: 24683293; PMCID: PMC3967851.
View in:
PubMed Mentions:
9
-
NIH's Big Data to Knowledge initiative and the advancement of biomedical informatics. J Am Med Inform Assoc. 2014 Mar-Apr; 21(2):193.
Ohno-Machado L. PMID: 24509598; PMCID: PMC3932475.
View in:
PubMed Mentions:
13 Fields:
-
Electronic health record systems: risks and benefits. J Am Med Inform Assoc. 2014 Feb; 21(e1):e1.
Ohno-Machado L. PMID: 24453123; PMCID: PMC3957407.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
The role of scientific publication in times of change. J Am Med Inform Assoc. 2014 Jan-Feb; 21(1):1.
Ohno-Machado L. PMID: 24335250; PMCID: PMC3912704.
View in:
PubMed Mentions: Fields:
-
Natural language processing in biomedicine: a unified system architecture overview. Methods Mol Biol. 2014; 1168:275-94.
Doan S, Conway M, Phuong TM, Ohno-Machado L. PMID: 24870142.
View in:
PubMed Mentions:
29 Fields:
Translation:
Humans
-
HUGO: Hierarchical mUlti-reference Genome cOmpression for aligned reads. J Am Med Inform Assoc. 2014 Mar-Apr; 21(2):363-73.
Li P, Jiang X, Wang S, Kim J, Xiong H, Ohno-Machado L. PMID: 24368726; PMCID: PMC3932469.
View in:
PubMed Mentions:
7 Fields:
Translation:
Humans
-
Data governance requirements for distributed clinical research networks: triangulating perspectives of diverse stakeholders. J Am Med Inform Assoc. 2014 Jul-Aug; 21(4):714-9.
Kim KK, Browe DK, Logan HC, Holm R, Hack L, Ohno-Machado L. PMID: 24302285; PMCID: PMC4078279.
View in:
PubMed Mentions:
12 Fields:
-
Game changer: how informatics moved from a supporting role to a central position in healthcare. J Am Med Inform Assoc. 2013 Dec; 20(e2):e197.
Ohno-Machado L. PMID: 24302668; PMCID: PMC3861937.
View in:
PubMed Mentions:
1 Fields:
-
DNA-COMPACT: DNA COMpression based on a pattern-aware contextual modeling technique. PLoS One. 2013; 8(11):e80377.
Li P, Wang S, Kim J, Xiong H, Ohno-Machado L, Jiang X. PMID: 24282536; PMCID: PMC3840021.
View in:
PubMed Mentions:
8 Fields:
-
Recent trends in biomedical informatics: a study based on JAMIA articles. J Am Med Inform Assoc. 2013 Dec; 20(e2):e198-205.
Jiang X, Tse K, Wang S, Doan S, Kim H, Ohno-Machado L. PMID: 24214018; PMCID: PMC3861936.
View in:
PubMed Mentions:
7 Fields:
-
Data science and informatics: when it comes to biomedical data, is there a real distinction? J Am Med Inform Assoc. 2013 Nov-Dec; 20(6):1009.
Ohno-Machado L. PMID: 24114329; PMCID: PMC3822125.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
-
WebGLORE: a web service for Grid LOgistic REgression. Bioinformatics. 2013 Dec 15; 29(24):3238-40.
Jiang W, Li P, Wang S, Wu Y, Xue M, Ohno-Machado L, Jiang X. PMID: 24072732; PMCID: PMC3842761.
View in:
PubMed Mentions:
23 Fields:
Translation:
Humans
-
Natural language processing: algorithms and tools to extract computable information from EHRs and from the biomedical literature. J Am Med Inform Assoc. 2013 Sep-Oct; 20(5):805.
Ohno-Machado L, Nadkarni P, Johnson K. PMID: 23935077; PMCID: PMC3756279.
View in:
PubMed Mentions:
15 Fields:
-
PhenDisco: phenotype discovery system for the database of genotypes and phenotypes. J Am Med Inform Assoc. 2014 Jan-Feb; 21(1):31-6.
Doan S, Lin KW, Conway M, Ohno-Machado L, Hsieh A, Feupe SF, Garland A, Ross MK, Jiang X, Farzaneh S, Walker R, Alipanah N, Zhang J, Xu H, Kim HE. PMID: 23989082; PMCID: PMC3912702.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Privacy technology to support data sharing for comparative effectiveness research: a systematic review. Med Care. 2013 Aug; 51(8 Suppl 3):S58-65.
Jiang X, Sarwate AD, Ohno-Machado L. PMID: 23774511; PMCID: PMC3728160.
View in:
PubMed Mentions:
19 Fields:
Translation:
Humans
-
Development of a privacy and security policy framework for a multistate comparative effectiveness research network. Med Care. 2013 Aug; 51(8 Suppl 3):S66-72.
Kim KK, McGraw D, Mamo L, Ohno-Machado L. PMID: 23774516.
View in:
PubMed Mentions:
9 Fields:
Translation:
Humans
-
Making it personal: translational bioinformatics. J Am Med Inform Assoc. 2013 Jul-Aug; 20(4):595-6.
Butte AJ, Ohno-Machado L. PMID: 23757438; PMCID: PMC3721179.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Electronic health records: monitoring the return on large investments. J Am Med Inform Assoc. 2013 Jun; 20(e1):e1.
Ohno-Machado L. PMID: 23687172; PMCID: PMC3715341.
View in:
PubMed Mentions:
1 Fields:
-
EXpectation Propagation LOgistic REgRession (EXPLORER): distributed privacy-preserving online model learning. J Biomed Inform. 2013 Jun; 46(3):480-96.
Wang S, Jiang X, Wu Y, Cui L, Cheng S, Ohno-Machado L. PMID: 23562651; PMCID: PMC3676314.
View in:
PubMed Mentions:
29 Fields:
-
Differential-Private Data Publishing Through Component Analysis. Trans Data Priv. 2013 Apr; 6(1):19-34.
Jiang X, Ji Z, Wang S, Mohammed N, Cheng S, Ohno-Machado L. PMID: 24409205; PMCID: PMC3883117.
View in:
PubMed Mentions:
6
-
An Adaptive Difference Distribution-based Coding with Hierarchical Tree Structure for DNA Sequence Compression. Proc Data Compress Conf. 2013; 2013:371-380.
Dai W, Xiong H, Jiang X, Ohno-Machado L. PMID: 26501129; PMCID: PMC4617277.
View in:
PubMed Mentions:
2
-
Identifying inference attacks against healthcare data repositories. AMIA Jt Summits Transl Sci Proc. 2013; 2013:262-6.
Vaidya J, Shafiq B, Jiang X, Ohno-Machado L. PMID: 24303279; PMCID: PMC3845790.
View in:
PubMed Mentions:
12
-
Genomes in the cloud: balancing privacy rights and the public good. AMIA Jt Summits Transl Sci Proc. 2013; 2013:128.
Ohno-Machado L, Farcas C, Kim J, Wang S, Jiang X. PMID: 24303320.
View in:
PubMed Mentions:
3
-
Differential expression of miR-145 in children with Kawasaki disease. PLoS One. 2013; 8(3):e58159.
Shimizu C, Kim J, Stepanowsky P, Trinh C, Lau HD, Akers JC, Chen C, Kanegaye JT, Tremoulet A, Ohno-Machado L, Burns JC. PMID: 23483985; PMCID: PMC3590129.
View in:
PubMed Mentions:
43 Fields:
Translation:
HumansCells
-
Informatics that works for you. J Am Med Inform Assoc. 2013 Mar-Apr; 20(2):211.
Ohno-Machado L. PMID: 23400397; PMCID: PMC3638197.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Comparison of four prediction models to discriminate benign from malignant vertebral compression fractures according to MRI feature analysis. AJR Am J Roentgenol. 2013 Mar; 200(3):493-502.
Thawait SK, Kim J, Klufas RA, Morrison WB, Flanders AE, Carrino JA, Ohno-Machado L. PMID: 23436836.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Abstractions for Genomics. Commun ACM. 2013 Jan; 56(1):83-93.
Bafna V, Kozanitis C, Deutsch A, Ohno-Machado L, Heiberg A, Varghese G. PMID: 25284821; PMCID: PMC4183138.
View in:
PubMed Mentions:
2
-
Nucleotide sequence alignment using sparse coding and belief propagation. Annu Int Conf IEEE Eng Med Biol Soc. 2013; 2013:588-91.
Roozgard A, Barzigar N, Wang S, Jiang X, Ohno-Machado L, Cheng S. PMID: 24109755; PMCID: PMC3909563.
View in:
PubMed Mentions:
1 Fields:
Translation:
HumansCells
-
Sharing data for the public good and protecting individual privacy: informatics solutions to combine different goals. J Am Med Inform Assoc. 2013 Jan 01; 20(1):1.
Ohno-Machado L. PMID: 23243087; PMCID: PMC3555342.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
-
Setting up an intronic miRNA database. Methods Mol Biol. 2013; 936:69-76.
Hinske LC, Heyn J, Galante PA, Ohno-Machado L, Kreth S. PMID: 23007499.
View in:
PubMed Mentions:
4 Fields:
Translation:
HumansAnimals
-
SurfaceomeDB: a cancer-orientated database for genes encoding cell surface proteins. Cancer Immun. 2012; 12:15.
de Souza JE, Galante PA, de Almeida RV, da Cunha JP, Ohara DT, Ohno-Machado L, Old LJ, de Souza SJ. PMID: 23390370; PMCID: PMC3554024.
View in:
PubMed Mentions:
10 Fields:
Translation:
Humans
-
To share or not to share: that is not the question. Sci Transl Med. 2012 Dec 19; 4(165):165cm15.
Ohno-Machado L. PMID: 23253606.
View in:
PubMed Mentions:
17 Fields:
-
Privacy-preserving heterogeneous health data sharing. J Am Med Inform Assoc. 2013 May 01; 20(3):462-9.
Mohammed N, Jiang X, Chen R, Fung BC, Ohno-Machado L. PMID: 23242630; PMCID: PMC3628047.
View in:
PubMed Mentions:
15 Fields:
Translation:
Humans
-
Doubly Optimized Calibrated Support Vector Machine (DOC-SVM): an algorithm for joint optimization of discrimination and calibration. PLoS One. 2012; 7(11):e48823.
Jiang X, Menon A, Wang S, Kim J, Ohno-Machado L. PMID: 23139819; PMCID: PMC3490990.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
A collaborative framework for Distributed Privacy-Preserving Support Vector Machine learning. AMIA Annu Symp Proc. 2012; 2012:1350-9.
Que J, Jiang X, Ohno-Machado L. PMID: 23304414; PMCID: PMC3540462.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
-
Preserving Institutional Privacy in Distributed binary Logistic Regression. AMIA Annu Symp Proc. 2012; 2012:1450-8.
Wu Y, Jiang X, Ohno-Machado L. PMID: 23304425; PMCID: PMC3540539.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
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Selecting cases for whom additional tests can improve prognostication. AMIA Annu Symp Proc. 2012; 2012:1260-8.
Jiang X, Kim J, Wu Y, Wang S, Ohno-Machado L. PMID: 23304404; PMCID: PMC3540468.
View in:
PubMed Mentions:
3 Fields:
Translation:
HumansCells
-
Careers in informatics: a diversity of options with an abundance of jobs. J Am Med Inform Assoc. 2012 Nov-Dec; 19(6):919.
Ohno-Machado L. PMID: 23077280; PMCID: PMC3534476.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
SPLOOCE: a new portal for the analysis of human splicing variants. RNA Biol. 2012 Nov; 9(11):1339-43.
Kroll JE, Galante PA, Ohara DT, Navarro FC, Ohno-Machado L, de Souza SJ. PMID: 23064119; PMCID: PMC3597574.
View in:
PubMed Mentions:
5 Fields:
Translation:
HumansCells
-
SHARE: system design and case studies for statistical health information release. J Am Med Inform Assoc. 2013 Jan 01; 20(1):109-16.
Gardner J, Xiong L, Xiao Y, Gao J, Post AR, Jiang X, Ohno-Machado L. PMID: 23059729; PMCID: PMC3555328.
View in:
PubMed Mentions:
14 Fields:
Translation:
Humans
-
Informatics 2.0: implications of social media, mobile health, and patient-reported outcomes for healthcare and individual privacy. J Am Med Inform Assoc. 2012 Sep-Oct; 19(5):683.
Ohno-Machado L. PMID: 22879365; PMCID: PMC3422848.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Reviewing social media use by clinicians. J Am Med Inform Assoc. 2012 Sep-Oct; 19(5):777-81.
von Muhlen M, Ohno-Machado L. PMID: 22759618; PMCID: PMC3422846.
View in:
PubMed Mentions:
87 Fields:
Translation:
Humans
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Southern California: a hotbed of biomedical engineering: nine bioengineers describe their research and why Southern California has the biotech market cornered. IEEE Pulse. 2012 Jul; 3(4):14-21.
Berger T, Meng E, George S, Khoo M, Marmarelis V, McCulloch A, Cauwenberghs G, Ohno-Machado L, Schultz J, Johnson JP. PMID: 23008840.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Pictogram evaluation and authoring collaboration environment. NI 2012 (2012). 2012; 2012:214.
Kim H, Tamayo D, Muhkin M, Kim J, Lam J, Ohno-Machado L, Aronoff-Spencer E. PMID: 24199088; PMCID: PMC3799134.
View in:
PubMed Mentions:
-
Big science, big data, and a big role for biomedical informatics. J Am Med Inform Assoc. 2012 Jun; 19(e1):e1.
Ohno-Machado L. PMID: 22718034; PMCID: PMC3392845.
View in:
PubMed Mentions:
4 Fields:
-
An improved model for predicting postoperative nausea and vomiting in ambulatory surgery patients using physician-modifiable risk factors. J Am Med Inform Assoc. 2012 Nov-Dec; 19(6):995-1002.
Sarin P, Urman RD, Ohno-Machado L. PMID: 22582204; PMCID: PMC3534465.
View in:
PubMed Mentions:
11 Fields:
Translation:
Humans
-
Grid Binary LOgistic REgression (GLORE): building shared models without sharing data. J Am Med Inform Assoc. 2012 Sep-Oct; 19(5):758-64.
Wu Y, Jiang X, Kim J, Ohno-Machado L. PMID: 22511014; PMCID: PMC3422844.
View in:
PubMed Mentions:
85 Fields:
Translation:
Humans
-
A patient-driven adaptive prediction technique to improve personalized risk estimation for clinical decision support. J Am Med Inform Assoc. 2012 Jun; 19(e1):e137-44.
Jiang X, Boxwala AA, El-Kareh R, Kim J, Ohno-Machado L. PMID: 22493049; PMCID: PMC3392846.
View in:
PubMed Mentions:
10 Fields:
Translation:
Humans
-
I-spline Smoothing for Calibrating Predictive Models. AMIA Jt Summits Transl Sci Proc. 2012; 2012:39-46.
Wu Y, Jiang X, Kim J, Ohno-Machado L. PMID: 22779048; PMCID: PMC3392066.
View in:
PubMed Mentions:
2
-
Informatics research to enable clinically relevant, personalized genomic medicine. J Am Med Inform Assoc. 2012 Mar-Apr; 19(2):149-50.
Ohno-Machado L. PMID: 22319175; PMCID: PMC3277638.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Predicting accurate probabilities with a ranking loss. Proc Int Conf Mach Learn. 2012; 2012:703-710.
Menon AK, Jiang XJ, Vembu S, Elkan C, Ohno-Machado L. PMID: 25285328; PMCID: PMC4180410.
View in:
PubMed Mentions:
10
-
Computer-based safety surveillance and patient-centered health records. J Am Med Inform Assoc. 2012 Jan-Feb; 19(1):1.
Ohno-Machado L. PMID: 22155973; PMCID: PMC3240770.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
A primer on the current state of microarray technologies. Methods Mol Biol. 2012; 802:3-17.
Trachtenberg AJ, Robert JH, Abdalla AE, Fraser A, He SY, Lacy JN, Rivas-Morello C, Truong A, Hardiman G, Ohno-Machado L, Liu F, Hovig E, Kuo WP. PMID: 22130870.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Innovative approaches to support patient decision making, improve safety, and enable large-scale clinical research. J Am Med Inform Assoc. 2011 Dec; 18 Suppl 1:i1.
Ohno-Machado L. PMID: 22180872; PMCID: PMC3241183.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Trends in biomedical informatics: most cited topics from recent years. J Am Med Inform Assoc. 2011 Dec; 18 Suppl 1:i166-70.
Kim HE, Jiang X, Kim J, Ohno-Machado L. PMID: 22180873; PMCID: PMC3241182.
View in:
PubMed Mentions:
9 Fields:
-
iDASH: integrating data for analysis, anonymization, and sharing. J Am Med Inform Assoc. 2012 Mar-Apr; 19(2):196-201.
Ohno-Machado L, Bafna V, Boxwala AA, Chapman BE, Chapman WW, Chaudhuri K, Day ME, Farcas C, Heintzman ND, Jiang X, Kim H, Kim J, Matheny ME, Resnic FS, Vinterbo SA, iDASH team. PMID: 22081224; PMCID: PMC3277627.
View in:
PubMed Mentions:
72 Fields:
-
Improving predictions in imbalanced data using Pairwise Expanded Logistic Regression. AMIA Annu Symp Proc. 2011; 2011:625-34.
Jiang X, El-Kareh R, Ohno-Machado L. PMID: 22195118; PMCID: PMC3243279.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Anomaly and signature filtering improve classifier performance for detection of suspicious access to EHRs. AMIA Annu Symp Proc. 2011; 2011:723-31.
Kim J, Grillo JM, Boxwala AA, Jiang X, Mandelbaum RB, Patel BA, Mikels D, Vinterbo SA, Ohno-Machado L. PMID: 22195129; PMCID: PMC3243249.
View in:
PubMed Mentions:
7 Fields:
Translation:
Humans
-
Calibrating predictive model estimates to support personalized medicine. J Am Med Inform Assoc. 2012 Mar-Apr; 19(2):263-74.
Jiang X, Osl M, Kim J, Ohno-Machado L. PMID: 21984587; PMCID: PMC3277613.
View in:
PubMed Mentions:
36 Fields:
Translation:
Humans
-
Natural language processing: an introduction. J Am Med Inform Assoc. 2011 Sep-Oct; 18(5):544-51.
Nadkarni PM, Ohno-Machado L, Chapman WW. PMID: 21846786; PMCID: PMC3168328.
View in:
PubMed Mentions:
305 Fields:
Translation:
Humans
-
Realizing the full potential of electronic health records: the role of natural language processing. J Am Med Inform Assoc. 2011 Sep-Oct; 18(5):539.
Ohno-Machado L. PMID: 21846784; PMCID: PMC3168331.
View in:
PubMed Mentions:
37 Fields:
Translation:
Humans
-
Using statistical and machine learning to help institutions detect suspicious access to electronic health records. J Am Med Inform Assoc. 2011 Jul-Aug; 18(4):498-505.
Boxwala AA, Kim J, Grillo JM, Ohno-Machado L. PMID: 21672912; PMCID: PMC3128412.
View in:
PubMed Mentions:
31 Fields:
Translation:
Humans
-
Biomedical informatics: how we got here and where we are headed. J Am Med Inform Assoc. 2011 Jul-Aug; 18(4):351.
Ohno-Machado L. PMID: 21672903; PMCID: PMC3128422.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Translational bioinformatics: linking knowledge across biological and clinical realms. J Am Med Inform Assoc. 2011 Jul-Aug; 18(4):354-7.
Sarkar IN, Butte AJ, Lussier YA, Tarczy-Hornoch P, Ohno-Machado L. PMID: 21561873; PMCID: PMC3128415.
View in:
PubMed Mentions:
32 Fields:
Translation:
Humans
-
Informatics is about algorithms, systems, people, and social networks. J Am Med Inform Assoc. 2011 May 01; 18(3):209.
Ohno-Machado L. PMID: 21486878; PMCID: PMC3078672.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
A hybrid open-access model to bridge the publishing divide and reach out to a broader community. J Am Med Inform Assoc. 2011 May 01; 18(3):210-1.
Ohno-Machado L. PMID: 21486879; PMCID: PMC3078671.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual. Nucleic Acids Res. 2011 Aug; 39(14):6056-68.
Galante PA, Parmigiani RB, Zhao Q, Caballero OL, de Souza JE, Navarro FC, Gerber AL, Nicolás MF, Salim AC, Silva AP, Edsall L, Devalle S, Almeida LG, Ye Z, Kuan S, Pinheiro DG, Tojal I, Pedigoni RG, de Sousa RG, Oliveira TY, de Paula MG, Ohno-Machado L, Kirkness EF, Levy S, da Silva WA, Vasconcelos AT, Ren B, Zago MA, Strausberg RL, Simpson AJ, de Souza SJ, Camargo AA. PMID: 21493686; PMCID: PMC3152357.
View in:
PubMed Mentions:
10 Fields:
Translation:
HumansCells
-
AnyExpress: integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm. BMC Bioinformatics. 2011 Mar 17; 12:75.
Kim J, Patel K, Jung H, Kuo WP, Ohno-Machado L. PMID: 21410990; PMCID: PMC3076267.
View in:
PubMed Mentions:
9 Fields:
Translation:
Humans
-
Twist1-induced invadopodia formation promotes tumor metastasis. Cancer Cell. 2011 Mar 08; 19(3):372-86.
Eckert MA, Lwin TM, Chang AT, Kim J, Danis E, Ohno-Machado L, Yang J. PMID: 21397860; PMCID: PMC3072410.
View in:
PubMed Mentions:
271 Fields:
Translation:
HumansAnimalsCells
-
Smooth isotonic regression: a new method to calibrate predictive models. AMIA Jt Summits Transl Sci Proc. 2011; 2011:16-20.
Jiang X, Osl M, Kim J, Ohno-Machado L. PMID: 22211175; PMCID: PMC3248752.
View in:
PubMed Mentions:
10
-
Evaluation of informatics systems: beyond RCTs and beyond the hospital. J Am Med Inform Assoc. 2011 Mar-Apr; 18(2):110-1.
Lehmannm H, Ohno-Machado L. PMID: 21385823; PMCID: PMC3116252.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Confluence of disciplines in health informatics: an international perspective. Methods Inf Med. 2011; 50(6):545-55.
Geissbuhler A, Kimura M, Kulikowski CA, Murray PJ, Ohno-Machado L, Park HA, Haux R. PMID: 22146917.
View in:
PubMed Mentions:
4 Fields:
-
What's new in informatics. J Am Med Inform Assoc. 2011 Jan-Feb; 18(1):1.
Ohno-Machado L. PMID: 21169616; PMCID: PMC3005884.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
A new JAMIA. J Am Med Inform Assoc. 2011 Jan-Feb; 18(1):2.
Ohno-Machado L. PMID: 21169617; PMCID: PMC3005883.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Snail2 is an essential mediator of Twist1-induced epithelial mesenchymal transition and metastasis. Cancer Res. 2011 Jan 01; 71(1):245-54.
Casas E, Kim J, Bendesky A, Ohno-Machado L, Wolfe CJ, Yang J. PMID: 21199805; PMCID: PMC3025803.
View in:
PubMed Mentions:
212 Fields:
Translation:
HumansAnimalsCells
-
Automating pressure ulcer risk assessment using documented patient data. Int J Med Inform. 2010 Dec; 79(12):840-8.
Kim H, Choi J, Thompson S, Meeker L, Dykes P, Goldsmith D, Ohno-Machado L. PMID: 20869303.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Building an ontology for pressure ulcer risk assessment to allow data sharing and comparisons across hospitals. AMIA Annu Symp Proc. 2010 Nov 13; 2010:382-6.
Kim H, Choi J, Secalag L, Dibsie L, Boxwala A, Ohno-Machado L. PMID: 21347005; PMCID: PMC3041354.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Effect of data combination on predictive modeling: a study using gene expression data. AMIA Annu Symp Proc. 2010 Nov 13; 2010:567-71.
Osl M, Dreiseitl S, Kim J, Patel K, Baumgartner C, Ohno-Machado L. PMID: 21347042; PMCID: PMC3041313.
View in:
PubMed Mentions:
7 Fields:
-
Feasibility evaluation of Smart Stretcher to improve patient safety during transfers. Methods Inf Med. 2011; 50(3):253-64.
Ohashi K, Kurihara Y, Watanabe K, Ohno-Machado L, Tanaka H. PMID: 21057715.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Positive predictive value of CT urography in the evaluation of upper tract urothelial cancer. AJR Am J Roentgenol. 2010 Nov; 195(5):W337-43.
Sadow CA, Wheeler SC, Kim J, Ohno-Machado L, Silverman SG. PMID: 20966298.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Assessing the quality of annotations in asthma gene expression experiments. BMC Bioinformatics. 2010 Oct 28; 11 Suppl 9:S8.
Lacson R, Mbagwu M, Yousif H, Ohno-Machado L. PMID: 21044366; PMCID: PMC2967749.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
A potential role for intragenic miRNAs on their hosts' interactome. BMC Genomics. 2010 Oct 01; 11:533.
Hinske LC, Galante PA, Kuo WP, Ohno-Machado L. PMID: 20920310; PMCID: PMC3091682.
View in:
PubMed Mentions:
80 Fields:
Translation:
HumansAnimalsCells
-
TGF-beta1 interactome: metastasis and beyond. Cancer Genomics Proteomics. 2010 Jul-Aug; 7(4):217-29.
Perera M, Tsang CS, Distel RJ, Lacy JN, Ohno-Machado L, Ricchiuti V, Samaranayake LP, Smejkal GB, Smith MG, Trachtenberg AJ, Kuo WP. PMID: 20656987.
View in:
PubMed Mentions:
16 Fields:
Translation:
HumansAnimalsCells
-
Smart medical environment at the point of care: auto-tracking clinical interventions at the bed side using RFID technology. Comput Biol Med. 2010 Jun; 40(6):545-54.
Ohashi K, Ota S, Ohno-Machado L, Tanaka H. PMID: 20471637.
View in:
PubMed Mentions:
12 Fields:
Translation:
Humans
-
DSGeo: software tools for cross-platform analysis of gene expression data in GEO. J Biomed Inform. 2010 Oct; 43(5):709-15.
Lacson R, Pitzer E, Kim J, Galante P, Hinske C, Ohno-Machado L. PMID: 20435161; PMCID: PMC2934864.
View in:
PubMed Mentions:
6 Fields:
Translation:
HumansAnimals
-
PositionMatcher: A Fast Custom-Annotation Tool for Short DNA Sequences. Summit Transl Bioinform. 2010 Mar 01; 2010:25-9.
Pitzer E, Kim J, Patel K, Galante PA, Ohno-Machado L. PMID: 21347141; PMCID: PMC3041550.
View in:
PubMed Mentions:
1
-
Towards large-scale sample annotation in gene expression repositories. BMC Bioinformatics. 2009 Sep 17; 10 Suppl 9:S9.
Pitzer E, Lacson R, Hinske C, Kim J, Galante PA, Ohno-Machado L. PMID: 19761579; PMCID: PMC2745696.
View in:
PubMed Mentions:
5 Fields:
-
Evaluation of a large-scale biomedical data annotation initiative. BMC Bioinformatics. 2009 Sep 17; 10 Suppl 9:S10.
Lacson R, Pitzer E, Hinske C, Galante P, Ohno-Machado L. PMID: 19761564; PMCID: PMC2745681.
View in:
PubMed Mentions:
7 Fields:
-
Lucila Ohno-Machado. Interview by Virginia Gewin. Nature. 2009 Jul 30; 460(7255):655.
Ohno-Machado L. PMID: 19650208.
View in:
PubMed Mentions: Fields:
-
Is there an advantage in scoring early embryos on more than one day? Hum Reprod. 2009 Sep; 24(9):2104-13.
Racowsky C, Ohno-Machado L, Kim J, Biggers JD. PMID: 19493872; PMCID: PMC2727402.
View in:
PubMed Mentions:
30 Fields:
Translation:
Humans
-
Presentation of the 2008 Morris F. Collen Award to Robert A. Greenes. J Am Med Inform Assoc. 2009 May-Jun; 16(3):413-8.
Ohno-Machado L, Ellison D, Shortliffe EH. PMID: 19606540; PMCID: PMC2732226.
View in:
PubMed Mentions: Fields:
-
Validation of an automated safety surveillance system with prospective, randomized trial data. Med Decis Making. 2009 Mar-Apr; 29(2):247-56.
Matheny ME, Morrow DA, Ohno-Machado L, Cannon CP, Sabatine MS, Resnic FS. PMID: 19015285; PMCID: PMC2743924.
View in:
PubMed Mentions:
10 Fields:
Translation:
HumansPHPublic Health
-
Improving calibration of logistic regression models by local estimates. AMIA Annu Symp Proc. 2008 Nov 06; 535-9.
Osl M, Ohno-Machado L, Baumgartner C, Tilg B, Dreiseitl S. PMID: 18998878; PMCID: PMC2656048.
View in:
PubMed Mentions:
3 Fields:
-
Comparison of RFID systems for tracking clinical interventions at the bedside. AMIA Annu Symp Proc. 2008 Nov 06; 525-9.
Ohashi K, Ota S, Ohno-Machado L, Tanaka H. PMID: 18998888; PMCID: PMC2656010.
View in:
PubMed Mentions:
6 Fields:
-
Peripheral arterial occlusive disease: global gene expression analyses suggest a major role for immune and inflammatory responses. BMC Genomics. 2008 Aug 01; 9:369.
Fu S, Zhao H, Shi J, Abzhanov A, Crawford K, Ohno-Machado L, Zhou J, Du Y, Kuo WP, Zhang J, Jiang M, Jin JG. PMID: 18673543; PMCID: PMC2529314.
View in:
PubMed Mentions:
17 Fields:
Translation:
HumansCells
-
Validation of oligoarrays for quantitative exploration of the transcriptome. BMC Genomics. 2008 May 30; 9:258.
Nygaard V, Liu F, Holden M, Kuo WP, Trimarchi J, Ohno-Machado L, Cepko CL, Frigessi A, Glad IK, Wiel MA, Hovig E, Lyng H. PMID: 18513391; PMCID: PMC2430212.
View in:
PubMed Mentions:
2 Fields:
Translation:
Animals
-
Angiogenic heterogeneity in head and neck squamous cell carcinoma: biological and therapeutic implications. Lab Invest. 2008 Apr; 88(4):342-53.
Hasina R, Whipple ME, Martin LE, Kuo WP, Ohno-Machado L, Lingen MW. PMID: 18283272; PMCID: PMC2614382.
View in:
PubMed Mentions:
24 Fields:
Translation:
HumansCells
-
SMART--an integrated wireless system for monitoring unattended patients. J Am Med Inform Assoc. 2008 Jan-Feb; 15(1):44-53.
Curtis DW, Pino EJ, Bailey JM, Shih EI, Waterman J, Vinterbo SA, Stair TO, Guttag JV, Greenes RA, Ohno-Machado L. PMID: 17947629; PMCID: PMC2274866.
View in:
PubMed Mentions:
13 Fields:
Translation:
Humans
-
Risk-adjusted sequential probability ratio test control chart methods for monitoring operator and institutional mortality rates in interventional cardiology. Am Heart J. 2008 Jan; 155(1):114-20.
Matheny ME, Ohno-Machado L, Resnic FS. PMID: 18082501.
View in:
PubMed Mentions:
14 Fields:
Translation:
Humans
-
Rare adverse event monitoring of medical devices with the use of an automated surveillance tool. AMIA Annu Symp Proc. 2007 Oct 11; 518-22.
Matheny ME, Arora N, Ohno-Machado L, Resnic FS. PMID: 18693890; PMCID: PMC2655807.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
-
Current status of the Japanese cancer registry system: results of a nationwide survey. AMIA Annu Symp Proc. 2007 Oct 11; 1104.
Sawa T, Yuji K, Kami M, Ohno-Machado L, Nakata Y. PMID: 18694201.
View in:
PubMed Mentions: Fields:
-
Validating an automated outcomes surveillance application using data from a terminated randomized, controlled trial (OPUS [TIMI-16]). AMIA Annu Symp Proc. 2007 Oct 11; 1043.
Matheny ME, Morrow DA, Ohno-Machado L, Cannon CP, Resnic FS. PMID: 18694141.
View in:
PubMed Mentions: Fields:
Translation:
HumansPHPublic Health
-
Is redundancy in vital signs monitoring useful? AMIA Annu Symp Proc. 2007 Oct 11; 923.
Curtis D, Bailey J, Pino E, Shih E, Greenes R, Guttag J, Stair T, Ohno-Machado L. PMID: 18694023.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Modeling cancer: integration of "omics" information in dynamic systems. J Bioinform Comput Biol. 2007 Aug; 5(4):977-86.
Stransky B, Barrera J, Ohno-Machado L, De Souza SJ. PMID: 17787066.
View in:
PubMed Mentions:
7 Fields:
Translation:
Humans
-
Comparison of hybridization-based and sequencing-based gene expression technologies on biological replicates. BMC Genomics. 2007 Jun 07; 8:153.
Liu F, Jenssen TK, Trimarchi J, Punzo C, Cepko CL, Ohno-Machado L, Hovig E, Kuo WP. PMID: 17555589; PMCID: PMC1899500.
View in:
PubMed Mentions:
36 Fields:
Translation:
AnimalsCells
-
Effects of SVM parameter optimization on discrimination and calibration for post-procedural PCI mortality. J Biomed Inform. 2007 Dec; 40(6):688-97.
Matheny ME, Resnic FS, Arora N, Ohno-Machado L. PMID: 17600771; PMCID: PMC2170520.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
-
Automatic correspondence of tags and genes (ACTG): a tool for the analysis of SAGE, MPSS and SBS data. Bioinformatics. 2007 Apr 01; 23(7):903-5.
Galante PA, Trimarchi J, Cepko CL, de Souza SJ, Ohno-Machado L, Kuo WP. PMID: 17277333.
View in:
PubMed Mentions:
6 Fields:
-
A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies. Nat Biotechnol. 2006 Jul; 24(7):832-40.
Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF, Freeman MW, Seed B, Jensen R, Church GM, Hovig E, Cepko CL, Park P, Ohno-Machado L, Jenssen TK. PMID: 16823376.
View in:
PubMed Mentions:
65 Fields:
-
Supratentorial low-grade glioma resectability: statistical predictive analysis based on anatomic MR features and tumor characteristics. Radiology. 2006 May; 239(2):506-13.
Talos IF, Zou KH, Ohno-Machado L, Bhagwat JG, Kikinis R, Black PM, Jolesz FA. PMID: 16641355; PMCID: PMC1475754.
View in:
PubMed Mentions:
28 Fields:
Translation:
Humans
-
Approximation properties of haplotype tagging. BMC Bioinformatics. 2006 Jan 09; 7:8.
Vinterbo SA, Dreiseitl S, Ohno-Machado L. PMID: 16401341; PMCID: PMC1395335.
View in:
PubMed Mentions: Fields:
Translation:
HumansAnimals
-
Prognosis in critical care. Annu Rev Biomed Eng. 2006; 8:567-99.
Ohno-Machado L, Resnic FS, Matheny ME. PMID: 16834567.
View in:
PubMed Mentions:
21 Fields:
Translation:
Humans
-
A certificate program in health informatics: Brazil/USA experience. Stud Health Technol Inform. 2006; 122:800.
Marin HF, Massad E, Marques EP, Ohno-Machado L. PMID: 17102389.
View in:
PubMed Mentions:
3 Fields:
-
Monitoring device safety in interventional cardiology. J Am Med Inform Assoc. 2006 Mar-Apr; 13(2):180-7.
Matheny ME, Ohno-Machado L, Resnic FS. PMID: 16357356; PMCID: PMC1447549.
View in:
PubMed Mentions:
9 Fields:
Translation:
Humans
-
Representation in stochastic search for phylogenetic tree reconstruction. J Biomed Inform. 2006 Feb; 39(1):43-50.
Weber G, Ohno-Machado L, Shieber S. PMID: 16359929.
View in:
PubMed Mentions: Fields:
Translation:
HumansAnimalsCells
-
The use of receiver operating characteristic curves in biomedical informatics. J Biomed Inform. 2005 Oct; 38(5):404-15.
Lasko TA, Bhagwat JG, Zou KH, Ohno-Machado L. PMID: 16198999.
View in:
PubMed Mentions:
226 Fields:
Translation:
Humans
-
Development of radiology prediction models using feature analysis. Acad Radiol. 2005 Apr; 12(4):415-21.
Carrino JA, Ohno-Machado L. PMID: 15831414.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Discrimination and calibration of mortality risk prediction models in interventional cardiology. J Biomed Inform. 2005 Oct; 38(5):367-75.
Matheny ME, Ohno-Machado L, Resnic FS. PMID: 16198996.
View in:
PubMed Mentions:
28 Fields:
Translation:
Humans
-
A global goodness-of-fit test for receiver operating characteristic curve analysis via the bootstrap method. J Biomed Inform. 2005 Oct; 38(5):395-403.
Zou KH, Resnic FS, Talos IF, Goldberg-Zimring D, Bhagwat JG, Haker SJ, Kikinis R, Jolesz FA, Ohno-Machado L. PMID: 16198998.
View in:
PubMed Mentions:
1 Fields:
Translation:
HumansCTClinical Trials
-
Small, fuzzy and interpretable gene expression based classifiers. Bioinformatics. 2005 May 01; 21(9):1964-70.
Vinterbo SA, Kim EY, Ohno-Machado L. PMID: 15661797.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Exploration of a Bayesian updating tool to provide real-time safety monitoring for new medical devices. AMIA Annu Symp Proc. 2005; 1045.
Matheny ME, Ohno-Machado L, Resnic FS. PMID: 16779332; PMCID: PMC1560574.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Combining classifiers using their receiver operating characteristics and maximum likelihood estimation. Med Image Comput Comput Assist Interv. 2005; 8(Pt 1):506-14.
Haker S, Wells WM, Warfield SK, Talos IF, Bhagwat JG, Goldberg-Zimring D, Mian A, Ohno-Machado L, Zou KH. PMID: 16685884; PMCID: PMC3681096.
View in:
PubMed Mentions:
7 Fields:
-
Training health informatics professionals in Brazil: rationale for the development of a new certificate program. AMIA Annu Symp Proc. 2005; 1042.
Marin HF, Massad E, Marques EP, Azevedo RS, Ohno-Machado L. PMID: 16779329; PMCID: PMC1560621.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Real-time ECG algorithms for ambulatory patient monitoring. AMIA Annu Symp Proc. 2005; 604-8.
Pino E, Ohno-Machado L, Wiechmann E, Curtis D. PMID: 16779111; PMCID: PMC1560458.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
WLAN PDA to improve efficiency in patient care documentation. AMIA Annu Symp Proc. 2005; 1107.
Sawa T, Funahara T, Nagatani H, Okahara M, Sase K, Nakata Y, Ohno-Machado L. PMID: 16779394; PMCID: PMC1560477.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
A greedy algorithm for supervised discretization. J Biomed Inform. 2004 Aug; 37(4):285-92.
Butterworth R, Simovici DA, Santos GS, Ohno-Machado L. PMID: 15465481.
View in:
PubMed Mentions:
3 Fields:
-
A primer on gene expression and microarrays for machine learning researchers. J Biomed Inform. 2004 Aug; 37(4):293-303.
Kuo WP, Kim EY, Trimarchi J, Jenssen TK, Vinterbo SA, Ohno-Machado L. PMID: 15465482.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
-
Research on machine learning issues in biomedical informatics modeling. J Biomed Inform. 2004 Aug; 37(4):221-3.
Ohno-Machado L. PMID: 15465475.
View in:
PubMed Mentions:
5 Fields:
-
Protecting patient privacy by quantifiable control of disclosures in disseminated databases. Int J Med Inform. 2004 Aug; 73(7-8):599-606.
Ohno-Machado L, Silveira PS, Vinterbo S. PMID: 15246040.
View in:
PubMed Mentions:
14 Fields:
Translation:
HumansPHPublic Health
-
Exploration of a bayesian updating methodology to monitor the safety of interventional cardiovascular procedures. Med Decis Making. 2004 Jul-Aug; 24(4):399-407.
Resnic FS, Zou KH, Do DV, Apostolakis G, Ohno-Machado L. PMID: 15271278.
View in:
PubMed Mentions:
7 Fields:
Translation:
Humans
-
The Goodman-Kruskal coefficient and its applications in genetic diagnosis of cancer. IEEE Trans Biomed Eng. 2004 Jul; 51(7):1095-102.
Jaroszewicz S, Simovici DA, Kuo WP, Ohno-Machado L. PMID: 15248526.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Genomic analysis of mouse retinal development. PLoS Biol. 2004 Sep; 2(9):E247.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL. PMID: 15226823; PMCID: PMC439783.
View in:
PubMed Mentions:
316 Fields:
Translation:
AnimalsCells
-
Multivariate selection of genetic markers in diagnostic classification. Artif Intell Med. 2004 Jun; 31(2):155-67.
Weber G, Vinterbo S, Ohno-Machado L. PMID: 15219292.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Deciphering gene expression profiles generated from DNA microarrays and their applications in oral medicine. Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 2004 May; 97(5):584-91.
Kuo WP, Whipple ME, Epstein JB, Jenssen TK, Santos GS, Ohno-Machado L, Sonis ST. PMID: 15153870.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Diagnostic accuracy of chest X-rays acquired using a digital camera for low-cost teleradiology. Int J Med Inform. 2004 Feb; 73(1):65-73.
Szot A, Jacobson FL, Munn S, Jazayeri D, Nardell E, Harrison D, Drosten R, Ohno-Machado L, Smeaton LM, Fraser HS. PMID: 15036080.
View in:
PubMed Mentions:
17 Fields:
Translation:
Humans
-
Prediction of mortality in an Indian intensive care unit. Comparison between APACHE II and artificial neural networks. Intensive Care Med. 2004 Feb; 30(2):248-253.
Nimgaonkar A, Karnad DR, Sudarshan S, Ohno-Machado L, Kohane I. PMID: 14727015.
View in:
PubMed Mentions:
19 Fields:
Translation:
Humans
-
Training in Health Informatics in Brazil. Yearb Med Inform. 2004; (1):185-191.
Marques EP, Marin HF, Massad E, Ohno-Machado L. PMID: 27706319.
View in:
PubMed Mentions: Fields:
-
International training in health informatics: a Brazilian experience. Stud Health Technol Inform. 2004; 107(Pt 2):898-902.
Marin HF, Massad E, Marques EP, Ohno-Machado L. PMID: 15360942.
View in:
PubMed Mentions:
3 Fields:
-
A nationwide adaptive prediction tool for coronary heart disease prevention. Br J Gen Pract. 2003 Nov; 53(496):866-70.
Holt TA, Ohno-Machado L. PMID: 14702907; PMCID: PMC1314730.
View in:
PubMed Mentions:
3 Fields:
Translation:
HumansPHPublic Health
-
An Epicurean learning approach to gene-expression data classification. Artif Intell Med. 2003 May; 28(1):75-87.
Albrecht A, Vinterbo SA, Ohno-Machado L. PMID: 12850314.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Microarrays and clinical dentistry. J Am Dent Assoc. 2003 Apr; 134(4):456-62.
Kuo WP, Whipple ME, Jenssen TK, Todd R, Epstein JB, Ohno-Machado L, Sonis ST, Park PJ. PMID: 12733779.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Classification and identification of genes associated with oral cancer based on gene expression profiles. A preliminary study. N Y State Dent J. 2003 Feb; 69(2):23-6.
Kuo WP, Hasina R, Ohno-Machado L, Lingen MW. PMID: 12703240.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Classification of movement states in Parkinson's disease using a wearable ambulatory monitor. AMIA Annu Symp Proc. 2003; 896.
Klapper DA, Weaver J, Fernandez H, Ohno-Machado L. PMID: 14728401; PMCID: PMC1480298.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
No-reflow is an independent predictor of death and myocardial infarction after percutaneous coronary intervention. Am Heart J. 2003 Jan; 145(1):42-6.
Resnic FS, Wainstein M, Lee MK, Behrendt D, Wainstein RV, Ohno-Machado L, Kirshenbaum JM, Rogers CD, Popma JJ, Piana R. PMID: 12514653.
View in:
PubMed Mentions:
72 Fields:
Translation:
Humans
-
Preoperative information management system using wireless PDAs. AMIA Annu Symp Proc. 2003; 995.
Sawa T, Okahara M, Santo M, Schmidt U, Nakata Y, Morita S, Ohno-Machado L. PMID: 14728498; PMCID: PMC1480168.
View in:
PubMed Mentions: Fields:
Translation:
HumansCTClinical Trials
-
A neural network-based similarity index for clustering DNA microarray data. Comput Biol Med. 2003 Jan; 33(1):1-15.
Sawa T, Ohno-Machado L. PMID: 12485626.
View in:
PubMed Mentions:
4 Fields:
Translation:
Animals
-
Logistic regression and artificial neural network classification models: a methodology review. J Biomed Inform. 2002 Oct-Dec; 35(5-6):352-9.
Dreiseitl S, Ohno-Machado L. PMID: 12968784.
View in:
PubMed Mentions:
372 Fields:
-
Gene expression profiling by DNA microarrays and its application to dental research. Oral Oncol. 2002 Oct; 38(7):650-6.
Kuo WP, Whipple ME, Sonis ST, Ohno-Machado L, Jenssen TK. PMID: 12353490.
View in:
PubMed Mentions:
4 Fields:
Translation:
HumansCells
-
Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics. 2002 Mar; 18(3):405-12.
Kuo WP, Jenssen TK, Butte AJ, Ohno-Machado L, Kohane IS. PMID: 11934739.
View in:
PubMed Mentions:
155 Fields:
Translation:
HumansCells
-
Visualization and evaluation of clusters for exploratory analysis of gene expression data. J Biomed Inform. 2002 Feb; 35(1):25-36.
Kim JH, Kohane IS, Ohno-Machado L. PMID: 12415724.
View in:
PubMed Mentions:
4 Fields:
Translation:
HumansAnimalsCells
-
Open source handheld-based EMR for paramedics working in rural areas. Proc AMIA Symp. 2002; 12-6.
Anantraman V, Mikkelsen T, Khilnani R, Kumar VS, Pentland A, Ohno-Machado L. PMID: 12463777; PMCID: PMC2244537.
View in:
PubMed Mentions:
9 Fields:
Translation:
Humans
-
Training in health informatics in Brazil. Stud Health Technol Inform. 2002; 90:757-60.
Marques EP, Marin HF, Massad E, Fraser H, Ohno-Machado L. PMID: 15460793.
View in:
PubMed Mentions:
2 Fields:
-
Providing context-sensitive decision-support based on WHO guidelines. Proc AMIA Symp. 2002; 637-41.
Ray HN, Boxwala AA, Anantraman V, Ohno-Machado L. PMID: 12463901; PMCID: PMC2244156.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Comparing imperfect measurements with the Bland-Altman technique: application in gene expression analysis. Proc AMIA Symp. 2002; 572-6.
Ohno-Machado L, Vinterbo S, Dreiseitl S, Jenssen TK, Kuo W. PMID: 12463888; PMCID: PMC2244491.
View in:
PubMed Mentions: Fields:
-
Building an asynchronous web-based tool for machine learning classification. Proc AMIA Symp. 2002; 869-73.
Weber G, Vinterbo S, Ohno-Machado L. PMID: 12463949; PMCID: PMC2244467.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Gene expression levels in different stages of progression in oral squamous cell carcinoma. Proc AMIA Symp. 2002; 415-9.
Kuo WP, Jenssen TK, Park PJ, Lingen MW, Hasina R, Ohno-Machado L. PMID: 12474876; PMCID: PMC2244435.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
-
Modeling medical prognosis: survival analysis techniques. J Biomed Inform. 2001 Dec; 34(6):428-39.
Ohno-Machado L. PMID: 12198763.
View in:
PubMed Mentions:
19 Fields:
Translation:
Humans
-
Vascular closure devices and the risk of vascular complications after percutaneous coronary intervention in patients receiving glycoprotein IIb-IIIa inhibitors. Am J Cardiol. 2001 Sep 01; 88(5):493-6.
Resnic FS, Blake GJ, Ohno-Machado L, Selwyn AP, Popma JJ, Rogers C. PMID: 11524056.
View in:
PubMed Mentions:
16 Fields:
Translation:
Humans
-
Simplified risk score models accurately predict the risk of major in-hospital complications following percutaneous coronary intervention. Am J Cardiol. 2001 Jul 01; 88(1):5-9.
Resnic FS, Ohno-Machado L, Selwyn A, Simon DI, Popma JJ. PMID: 11423050.
View in:
PubMed Mentions:
17 Fields:
Translation:
Humans
-
Effects of case removal in prognostic models. Methods Inf Med. 2001 Mar; 40(1):32-8.
Ohno-Machado L, Vinterbo S. PMID: 11310157.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
A comparison of machine learning methods for the diagnosis of pigmented skin lesions. J Biomed Inform. 2001 Feb; 34(1):28-36.
Dreiseitl S, Ohno-Machado L, Kittler H, Vinterbo S, Billhardt H, Binder M. PMID: 11376540.
View in:
PubMed Mentions:
33 Fields:
Translation:
Humans
-
Training in medical informatics: combining onsite and online instruction. Stud Health Technol Inform. 2001; 84(Pt 2):1066-70.
Ohno-Machado L, Marin HF, Marques EP, Masssad E, Greenes RA. PMID: 11604895.
View in:
PubMed Mentions:
1 Fields:
-
Finding appropriate clinical trials: evaluating encoded eligibility criteria with incomplete data. Proc AMIA Symp. 2001; 27-31.
Ash N, Ogunyemi O, Zeng Q, Ohno-Machado L. PMID: 11825151; PMCID: PMC2243370.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
-
Disambiguation data: extracting information from anonymized sources. Proc AMIA Symp. 2001; 144-8.
Dreiseitl S, Vinterbo S, Ohno-Machado L. PMID: 11825171; PMCID: PMC2243291.
View in:
PubMed Mentions:
3 Fields:
Translation:
Humans
-
Hiding information by cell suppression. Proc AMIA Symp. 2001; 726-30.
Vinterbo SA, Ohno-Machado L, Dreiseitl S. PMID: 11825281; PMCID: PMC2243346.
View in:
PubMed Mentions:
4 Fields:
-
Generation of dynamically configured check lists for intra-operative problems using a set of covering algorithms. Proc AMIA Symp. 2001; 593-7.
Sawa T, Ohno-Machado L. PMID: 11837218; PMCID: PMC2243696.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Effects of data anonymization by cell suppression on descriptive statistics and predictive modeling performance. Proc AMIA Symp. 2001; 503-7.
Ohno-Machado L, Vinterbo SA, Dreiseitl S. PMID: 11825239; PMCID: PMC2243599.
View in:
PubMed Mentions:
7 Fields:
Translation:
Humans
-
Unsupervised learning from complex data: the matrix incision tree algorithm. Pac Symp Biocomput. 2001; 30-41.
Kim JH, Ohno-Machado L, Kohane IS. PMID: 11262950.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Using patient-reportable clinical history factors to predict myocardial infarction. Comput Biol Med. 2001 Jan; 31(1):1-13.
Wang SJ, Ohno-Machado L, Fraser HS, Kennedy RL. PMID: 11058690.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Comparing three-class diagnostic tests by three-way ROC analysis. Med Decis Making. 2000 Jul-Sep; 20(3):323-31.
Dreiseitl S, Ohno-Machado L, Binder M. PMID: 10929855.
View in:
PubMed Mentions:
28 Fields:
Translation:
Humans
-
A genetic algorithm approach to multi-disorder diagnosis. Artif Intell Med. 2000 Feb; 18(2):117-32.
Vinterbo S, Ohno-Machado L. PMID: 10648846.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Using electronic data to predict the probability of true bacteremia from positive blood cultures. Proc AMIA Symp. 2000; 893-7.
Wang SJ, Kuperman GJ, Ohno-Machado L, Onderdonk A, Sandige H, Bates DW. PMID: 11080013; PMCID: PMC2243892.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Major complications after angioplasty in patients with chronic renal failure: a comparison of predictive models. Proc AMIA Symp. 2000; 457-61.
Lacson RC, Ohno-Machado L. PMID: 11079925; PMCID: PMC2243840.
View in:
PubMed Mentions: Fields:
Translation:
Humans
-
Decision trees and fuzzy logic: a comparison of models for the selection of measles vaccination strategies in Brazil. Proc AMIA Symp. 2000; 625-9.
Ohno-Machado L, Lacson R, Massad E. PMID: 11079959; PMCID: PMC2244038.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Development and evaluation of models to predict death and myocardial infarction following coronary angioplasty and stenting. Proc AMIA Symp. 2000; 690-3.
Resnic FS, Popma JJ, Ohno-Machado L. PMID: 11079972; PMCID: PMC2243827.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Building knowledge in a complex preterm birth problem domain. Proc AMIA Symp. 2000; 305-9.
Goodwin L, Maher S, Ohno-Machado L, Iannacchione MA, Crockett P, Dreiseitl S, Vinterbo S, Hammond W. PMID: 11079894; PMCID: PMC2243761.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
GLIF3: the evolution of a guideline representation format. Proc AMIA Symp. 2000; 645-9.
Peleg M, Boxwala AA, Ogunyemi O, Zeng Q, Tu S, Lacson R, Bernstam E, Ash N, Mork P, Ohno-Machado L, Shortliffe EH, Greenes RA. PMID: 11079963; PMCID: PMC2243832.
View in:
PubMed Mentions:
36 Fields:
-
Risk stratification in heart failure using artificial neural networks. Proc AMIA Symp. 2000; 32-6.
Atienza F, Martinez-Alzamora N, De Velasco JA, Dreiseitl S, Ohno-Machado L. PMID: 11079839; PMCID: PMC2243942.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
The decision systems group: creating a framework for decision making. MD Comput. 1999 Jul-Aug; 16(4):23-7.
Greenes RA, Boxwala A, Ohno-Machado L. PMID: 10507232.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Neural network applications in physical medicine and rehabilitation. Am J Phys Med Rehabil. 1999 Jul-Aug; 78(4):392-8.
Ohno-Machado L, Rowland T. PMID: 10418849.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Using Boolean reasoning to anonymize databases. Artif Intell Med. 1999 Mar; 15(3):235-54.
Ohrn A, Ohno-Machado L. PMID: 10206109.
View in:
PubMed Mentions:
9 Fields:
Translation:
Humans
-
A genetic algorithm to select variables in logistic regression: example in the domain of myocardial infarction. Proc AMIA Symp. 1999; 984-8.
Vinterbo S, Ohno-Machado L. PMID: 10566508; PMCID: PMC2232877.
View in:
PubMed Mentions:
10 Fields:
Translation:
Humans
-
Evaluating variable selection methods for diagnosis of myocardial infarction. Proc AMIA Symp. 1999; 246-50.
Dreiseitl S, Ohno-Machado L, Vinterbo S. PMID: 10566358; PMCID: PMC2232647.
View in:
PubMed Mentions:
6 Fields:
Translation:
Humans
-
Decision support for clinical trial eligibility determination in breast cancer. Proc AMIA Symp. 1999; 340-4.
Ohno-Machado L, Wang SJ, Mar P, Boxwala AA. PMID: 10566377; PMCID: PMC2232554.
View in:
PubMed Mentions:
21 Fields:
Translation:
Humans
-
A framework and tools for authoring, editing, documenting, sharing, searching, navigating, and executing computer-based clinical guidelines. Proc AMIA Symp. 1999; 261-5.
Greenes RA, Boxwala A, Sloan WN, Ohno-Machado L, Deibel SR. PMID: 10566361; PMCID: PMC2232593.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
The guideline interchange format: a model for representing guidelines. J Am Med Inform Assoc. 1998 Jul-Aug; 5(4):357-72.
Ohno-Machado L, Gennari JH, Murphy SN, Jain NL, Tu SW, Oliver DE, Pattison-Gordon E, Greenes RA, Shortliffe EH, Barnett GO. PMID: 9670133; PMCID: PMC61313.
View in:
PubMed Mentions:
63 Fields:
-
Diagnosing breast cancer from FNAs: variable relevance in neural network and logistic regression models. Stud Health Technol Inform. 1998; 52 Pt 1:537-40.
Ohno-Machado L, Bialek D. PMID: 10384515.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Comparison of multiple prediction models for ambulation following spinal cord injury. Proc AMIA Symp. 1998; 528-32.
Rowland T, Ohno-Machado L, Ohrn A. PMID: 9929275; PMCID: PMC2232380.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Building manageable rough set classifiers. Proc AMIA Symp. 1998; 543-7.
Ohrn A, Ohno-Machado L, Rowland T. PMID: 9929278; PMCID: PMC2232320.
View in:
PubMed Mentions:
1 Fields:
-
Improving machine learning performance by removing redundant cases in medical data sets. Proc AMIA Symp. 1998; 523-7.
Ohno-Machado L, Fraser HS, Ohrn A. PMID: 9929274; PMCID: PMC2232167.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Sequential versus standard neural networks for pattern recognition: an example using the domain of coronary heart disease. Comput Biol Med. 1997 Jul; 27(4):267-81.
Ohno-Machado L, Musen MA. PMID: 9303265.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
A comparison of Cox proportional hazards and artificial neural network models for medical prognosis. Comput Biol Med. 1997 Jan; 27(1):55-65.
Ohno-Machado L. PMID: 9055046.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
A virtual repository approach to clinical and utilization studies: application in mammography as alternative to a national database. Proc AMIA Annu Fall Symp. 1997; 369-73.
Ohno-Machado L, Boxwala AA, Ehresman J, Smith DN, Greenes RA. PMID: 9357650; PMCID: PMC2233552.
View in:
PubMed Mentions: Fields:
-
Sequential use of neural networks for survival prediction in AIDS. Proc AMIA Annu Fall Symp. 1996; 170-4.
Ohno-Machado L. PMID: 8947650; PMCID: PMC2233186.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
A comparison of two computer-based prognostic systems for AIDS. Proc Annu Symp Comput Appl Med Care. 1995; 737-41.
Ohno-Machado L, Musen MA. PMID: 8563387; PMCID: PMC2579191.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Hierarchical neural networks for survival analysis. Medinfo. 1995; 8 Pt 1:828-32.
Ohno-Machado L, Walker MG, Musen MA. PMID: 8591339.
View in:
PubMed Mentions:
2 Fields:
Translation:
Humans
-
Identification of low frequency patterns in backpropagation neural networks. Proc Annu Symp Comput Appl Med Care. 1994; 853-9.
Ohno-Machado L. PMID: 7950045; PMCID: PMC2247950.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
Prognostic classification for AIDS patients in Brazil. J Med Syst. 1993 Aug; 17(3-4):163-72.
Ohno-Machado L. PMID: 8254260.
View in:
PubMed Mentions:
1 Fields:
Translation:
Humans
-
AIDS2: a decision-support tool for decreasing physicians' uncertainty regarding patient eligibility for HIV treatment protocols. Proc Annu Symp Comput Appl Med Care. 1993; 429-33.
Ohno-Machado L, Parra E, Henry SB, Tu SW, Musen MA. PMID: 8130510; PMCID: PMC2248545.
View in:
PubMed Mentions:
10 Fields:
Translation:
Humans