Srinivasan Ramachandran

Title(s)RSCH DATA ANL 3, Bioengineering
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Limitations of the human iPSC-derived neuron model for early-onset Alzheimer's disease. Mol Brain. 2023 Nov 03; 16(1):75. Valdes P, Henry KW, Fitzgerald MQ, Muralidharan K, Caldwell AB, Ramachandran S, Goldstein LSB, Mobley WC, Galasko DR, Subramaniam S. PMID: 37924159; PMCID: PMC10623777.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. Endotype Characterization Reveals Mechanistic Differences Across Brain Regions in Sporadic Alzheimer's Disease. J Alzheimers Dis Rep. 2023; 7(1):957-972. Patel AO, Caldwell AB, Ramachandran S, Subramaniam S. PMID: 37849634; PMCID: PMC10578327.
      View in: PubMed   Mentions:
    3. MetGENE: gene-centric metabolomics information retrieval tool. Gigascience. 2022 Dec 28; 12. Srinivasan S, Maurya MR, Ramachandran S, Fahy E, Subramaniam S. PMID: 37983749; PMCID: PMC10659118.
      View in: PubMed   Mentions:    Fields:    
    4. Transcriptomic profiling of sporadic Alzheimer's disease patients. Mol Brain. 2022 10 12; 15(1):83. Caldwell AB, Anantharaman BG, Ramachandran S, Nguyen P, Liu Q, Trinh I, Galasko DR, Desplats PA, Wagner SL, Subramaniam S. PMID: 36224601; PMCID: PMC9559068.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    5. ARID1B, a molecular suppressor of erythropoiesis, is essential for the prevention of Monge's disease. Exp Mol Med. 2022 06; 54(6):777-787. Azad P, Caldwell AB, Ramachandran S, Spann NJ, Akbari A, Villafuerte FC, Bermudez D, Zhao H, Poulsen O, Zhou D, Bafna V, Subramaniam S, Haddad GG. PMID: 35672450; PMCID: PMC9256584.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    6. Heme Oxygenase-1 at the Nexus of Endothelial Cell Fate Decision Under Oxidative Stress. Front Cell Dev Biol. 2021; 9:702974. Raghunandan S, Ramachandran S, Ke E, Miao Y, Lal R, Chen ZB, Subramaniam S. PMID: 34595164; PMCID: PMC8476872.
      View in: PubMed   Mentions: 3  
    7. Direct DNA Methylation Profiling with an Electric Biosensor. ACS Nano. 2020 06 23; 14(6):6743-6751. Ban DK, Liu Y, Wang Z, Ramachandran S, Sarkar N, Shi Z, Liu W, Karkisaval AG, Martinez-Loran E, Zhang F, Glinsky G, Bandaru PR, Fan C, Lal R. PMID: 32407064.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    8. Small molecule NPT-440-1 inhibits ionic flux through Aβ1-42 pores: Implications for Alzheimer's disease therapeutics. Nanomedicine. 2016 11; 12(8):2331-2340. Gillman AL, Lee J, Ramachandran S, Capone R, Gonzalez T, Wrasidlo W, Masliah E, Lal R. PMID: 27335341; PMCID: PMC5116404.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    9. Ion Channel Formation by Tau Protein: Implications for Alzheimer's Disease and Tauopathies. Biochemistry. 2015 Dec 22; 54(50):7320-5. Patel N, Ramachandran S, Azimov R, Kagan BL, Lal R. PMID: 26575330; PMCID: PMC4690196.
      View in: PubMed   Mentions: 23     Fields:    
    10. Role of the fast kinetics of pyroglutamate-modified amyloid-β oligomers in membrane binding and membrane permeability. Biochemistry. 2014 Jul 22; 53(28):4704-14. Lee J, Gillman AL, Jang H, Ramachandran S, Kagan BL, Nussinov R, Teran Arce F. PMID: 24950761; PMCID: PMC4215883.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    11. Activity and architecture of pyroglutamate-modified amyloid-β (AβpE3-42) pores. J Phys Chem B. 2014 Jul 03; 118(26):7335-44. Gillman AL, Jang H, Lee J, Ramachandran S, Kagan BL, Nussinov R, Teran Arce F. PMID: 24922585; PMCID: PMC4096221.
      View in: PubMed   Mentions: 23     Fields:    Translation:Cells
    12. Structure and permeability of ion-channels by integrated AFM and waveguide TIRF microscopy. Sci Rep. 2014 Mar 21; 4:4424. Ramachandran S, Arce FT, Patel NR, Quist AP, Cohen DA, Lal R. PMID: 24651823; PMCID: PMC3961736.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    13. High performance, LED powered, waveguide based total internal reflection microscopy. Sci Rep. 2013; 3:2133. Ramachandran S, Cohen DA, Quist AP, Lal R. PMID: 23823601; PMCID: PMC3701166.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    14. Effects of point substitutions on the structure of toxic Alzheimer's β-amyloid channels: atomic force microscopy and molecular dynamics simulations. Biochemistry. 2012 Apr 10; 51(14):3031-8. Connelly L, Jang H, Arce FT, Ramachandran S, Kagan BL, Nussinov R, Lal R. PMID: 22413858; PMCID: PMC7512688.
      View in: PubMed   Mentions: 29     Fields:    Translation:Cells
    15. Atomic force microscopy and MD simulations reveal pore-like structures of all-D-enantiomer of Alzheimer's β-amyloid peptide: relevance to the ion channel mechanism of AD pathology. J Phys Chem B. 2012 Feb 09; 116(5):1728-35. Connelly L, Jang H, Arce FT, Capone R, Kotler SA, Ramachandran S, Kagan BL, Nussinov R, Lal R. PMID: 22217000; PMCID: PMC4342054.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    16. DNA zipper-based tweezers. Langmuir. 2012 Jan 10; 28(1):534-40. Landon PB, Ramachandran S, Gillman A, Gidron T, Yoon D, Lal R. PMID: 21875130.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    17. Potential role of atomic force microscopy in systems biology. Wiley Interdiscip Rev Syst Biol Med. 2011 Nov-Dec; 3(6):702-16. Ramachandran S, Teran Arce F, Lal R. PMID: 21766465; PMCID: PMC4353599.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    18. Polymorphism of amyloid β peptide in different environments: implications for membrane insertion and pore formation. Soft Matter. 2011 May 09; 7(11):5267-5273. Arce FT, Jang H, Ramachandran S, Landon PB, Nussinov R, Lal R. PMID: 21918653; PMCID: PMC3170770.
      View in: PubMed   Mentions: 22     Fields:    
    19. Multidimensional atomic force microscopy: a versatile novel technology for nanopharmacology research. AAPS J. 2010 Dec; 12(4):716-28. Lal R, Ramachandran S, Arnsdorf MF. PMID: 20957528; PMCID: PMC2976997.
      View in: PubMed   Mentions: 10     Fields:    
    20. Scope of atomic force microscopy in the advancement of nanomedicine. Indian J Exp Biol. 2010 Oct; 48(10):1020-36. Ramachandran S, Lal R. PMID: 21299045.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
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