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Shira Abeles

TitleAssistant Clinical Professor
InstitutionUniversity of California San Diego
DepartmentMedicine
Address200 W. Arbor Drive #8415
San Diego CA 92103
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Ly M, Jones MB, Abeles S, Santiago-Rodriguez TM, Gao J, Chan IC, Ghose C, Pride DT. Transmission of viruses via our microbiomes. Microbiome. 2016 Dec 02; 4(1):64. PMID: 27912785.
      View in: PubMed
    2. Abeles S, Jones MB, Santiago-Rodriguez TM, Ly M, Klitgord N, Yooseph S, Nelson KE, Pride DT. Microbial diversity in individuals and their household contacts following typical antibiotic courses. Microbiome. 2016 07 30; 4(1):39. PMID: 27473422; PMCID: PMC4967329.
    3. Shah NS, Greenberg JA, McNulty MC, Gregg KS, Riddell J, Mangino JE, Weber DM, Hebert CL, Marzec NS, Barron MA, Chaparro-Rojas F, Restrepo A, Hemmige V, Prasidthrathsint K, Cobb S, Herwaldt L, Raabe V, Cannavino CR, Hines AG, Bares SH, Antiporta PB, Scardina T, Patel U, Reid G, Mohazabnia P, Kachhdiya S, Le BM, Park CJ, Ostrowsky B, Robicsek A, Smith BA, Schied J, Bhatti MM, Mayer S, Sikka M, Murphy-Aguilu I, Patwari P, Abeles S, Torriani FJ, Abbas Z, Toya S, Doktor K, Chakrabarti A, Doblecki-Lewis S, Looney DJ, David MZ. Bacterial and viral co-infections complicating severe influenza: Incidence and impact among 507 U.S. patients, 2013-14. J Clin Virol. 2016 07; 80:12-9. PMID: 27130980.
      View in: PubMed
    4. Abeles S, Ly M, Santiago-Rodriguez TM, Pride DT. Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes. PLoS One. 2015; 10(8):e0134941. PMID: 26309137; PMCID: PMC4550281.
    5. Shah NS, Greenberg JA, McNulty MC, Gregg KS, Riddell J, Mangino JE, Weber DM, Hebert CL, Marzec NS, Barron MA, Chaparro-Rojas F, Restrepo A, Hemmige V, Prasidthrathsint K, Cobb S, Herwaldt L, Raabe V, Cannavino CR, Hines AG, Bares SH, Antiporta PB, Scardina T, Patel U, Reid G, Mohazabnia P, Kachhdiya S, Le BM, Park CJ, Ostrowsky B, Robicsek A, Smith BA, Schied J, Bhatti MM, Mayer S, Sikka M, Murphy-Aguilu I, Patwari P, Abeles S, Torriani FJ, Abbas Z, Toya S, Doktor K, Chakrabarti A, Doblecki-Lewis S, Looney DJ, David MZ. Severe Influenza in 33 US Hospitals, 2013-2014: Complications and Risk Factors for Death in 507 Patients. Infect Control Hosp Epidemiol. 2015 Nov; 36(11):1251-60. PMID: 26224364.
      View in: PubMed
    6. Santiago-Rodriguez TM, Naidu M, Abeles S, Boehm TK, Ly M, Pride DT. Transcriptome analysis of bacteriophage communities in periodontal health and disease. BMC Genomics. 2015 Jul 28; 16:549. PMID: 26215258; PMCID: PMC4515923.
    7. Abeles S, Pride DT. Molecular bases and role of viruses in the human microbiome. J Mol Biol. 2014 Nov 25; 426(23):3892-906. PMID: 25020228.
      View in: PubMed
    8. Naidu M, Robles-Sikisaka R, Abeles S, Boehm TK, Pride DT. Characterization of bacteriophage communities and CRISPR profiles from dental plaque. BMC Microbiol. 2014 Jun 30; 14:175. PMID: 24981669; PMCID: PMC4104742.
    9. Robles-Sikisaka R, Naidu M, Ly M, Salzman J, Abeles S, Boehm TK, Pride DT. Conservation of streptococcal CRISPRs on human skin and saliva. BMC Microbiol. 2014 Jun 06; 14:146. PMID: 24903519; PMCID: PMC4063239.
    10. Ly M, Abeles S, Boehm TK, Robles-Sikisaka R, Naidu M, Santiago-Rodriguez T, Pride DT. Altered oral viral ecology in association with periodontal disease. MBio. 2014 May 20; 5(3):e01133-14. PMID: 24846382; PMCID: PMC4030452.
    11. Abeles S, Robles-Sikisaka R, Ly M, Lum AG, Salzman J, Boehm TK, Pride DT. Human oral viruses are personal, persistent and gender-consistent. ISME J. 2014 Sep; 8(9):1753-67. PMID: 24646696; PMCID: PMC4139723.
    12. Abeles S, Chuquiyauri R, Tong C, Vinetz JM. Human host-derived cytokines associated with Plasmodium vivax transmission from acute malaria patients to Anopheles darlingi mosquitoes in the Peruvian Amazon. Am J Trop Med Hyg. 2013 Jun; 88(6):1130-7. PMID: 23478585; PMCID: PMC3752813.
    13. Bright AT, Tewhey R, Abeles S, Chuquiyauri R, Llanos-Cuentas A, Ferreira MU, Schork NJ, Vinetz JM, Winzeler EA. Whole genome sequencing analysis of Plasmodium vivax using whole genome capture. BMC Genomics. 2012 Jun 21; 13:262. PMID: 22721170; PMCID: PMC3410760.
    14. Chuquiyauri R, Paredes M, PeƱataro P, Torres S, Marin S, Tenorio A, Brouwer KC, Abeles S, Llanos-Cuentas A, Gilman RH, Kosek M, Vinetz JM. Socio-demographics and the development of malaria elimination strategies in the low transmission setting. Acta Trop. 2012 Mar; 121(3):292-302. PMID: 22100446; PMCID: PMC3294046.
    15. da Silva-Nunes M, Moreno M, Conn JE, Gamboa D, Abeles S, Vinetz JM, Ferreira MU. Amazonian malaria: asymptomatic human reservoirs, diagnostic challenges, environmentally driven changes in mosquito vector populations, and the mandate for sustainable control strategies. Acta Trop. 2012 Mar; 121(3):281-91. PMID: 22015425; PMCID: PMC3308722.
    16. Bounkeua V, Li F, Chuquiyauri R, Abeles S, McClean CM, Neyra V, Llanos-Cuentas A, Yori PP, Vinetz JM. Lack of molecular correlates of Plasmodium vivax ookinete development. Am J Trop Med Hyg. 2011 Aug; 85(2):207-13. PMID: 21813836; PMCID: PMC3144814.
    17. Green JS, Abeles S, Uslan DZ, Mehta SR. Persistent neutrophilic meningitis in an immunocompetent patient after basilar skull fracture: case report. BMC Infect Dis. 2011 May 19; 11:136. PMID: 21595944; PMCID: PMC3115869.
    18. Abeles M, Abeles S, Abeles AM. Fibromyalgia remains a controversial medical enigma. Am Fam Physician. 2008 May 01; 77(9):1220, 1222; author reply 1222, 1224. PMID: 18543429.
      View in: PubMed
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