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Sreekanth Chalasani

Title(s)Adjunct Professor, Neurobiology
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    1. Accept-reject decision-making revealed via a quantitative and ethological study of C. elegans foraging. Elife. 2025 Sep 10; 13. Haley JA, Chen T, Aoi M, Chalasani SH. PMID: 40929174; PMCID: PMC12422737.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    2. Evolution of lateralized gustation in nematodes. Elife. 2025 Jun 30; 14. Mackie M, Le VV, Carstensen HR, Kushnir NR, Castro DL, Dimov IM, Quach KT, Cook SJ, Hobert O, Chalasani SH, Hong RL. PMID: 40586702; PMCID: PMC12208668.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    3. Accept-reject decision-making revealed via a quantitative and ethological study of C. elegans foraging. bioRxiv. 2025 Jun 16. Haley JA, Chen T, Aoi M, Chalasani SH. PMID: 40667195; PMCID: PMC12262243.
      View in: PubMed   Mentions:
    4. A framework for analyzing C. elegans neural activity using multi-dimensional hyperbolic embedding. bioRxiv. 2025 May 13. Rusu I, Cecere ZT, How JJ, Quach KT, Yemini E, Sharpee TO, Chalasani SH. PMID: 40463233; PMCID: PMC12132397.
      View in: PubMed   Mentions:
    5. Interdependence between SEB-3 receptor and NLP-49 peptides shifts across predator-induced defensive behavioral modes in Caenorhabditis elegans. Elife. 2025 Mar 31; 13. Quach KT, Hughes GA, Chalasani SH. PMID: 40163376; PMCID: PMC11957542.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    6. Evolution of lateralized gustation in nematodes. bioRxiv. 2025 Mar 06. Mackie M, Le VV, Carstensen HR, Kushnir NR, Castro DL, Dimov IM, Quach KT, Cook SJ, Hobert O, Chalasani SH, Hong RL. PMID: 39282255; PMCID: PMC11398344.
      View in: PubMed   Mentions:
    7. Supra- and sub-threshold intracellular-like recording of 2D and 3D neuronal networks using nanopillar electrode arrays. Microsyst Nanoeng. 2024 Dec 05; 10(1):184. Shukla S, Schwartz JL, Walsh C, Wong WM, Patel V, Hsieh YP, Onwuasoanya C, Chen S, Offenhäusser A, Cauwenberghs G, Santoro F, Muotri AR, Yeo GW, Chalasani SH, Jahed Z. PMID: 39632788; PMCID: PMC11618331.
      View in: PubMed   Mentions: 2  
    8. Conserved autism-associated genes tune social feeding behavior in C. elegans. Nat Commun. 2024 10 28; 15(1):9301. Cowen MH, Haskell D, Zoga K, Reddy KC, Chalasani SH, Hart MP. PMID: 39468047; PMCID: PMC11519495.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    9. Neurexin drives Caenorhabditis elegans avoidance behavior independently of its post-synaptic binding partner neuroligin. G3 (Bethesda). 2024 Aug 07; 14(8). Muirhead CS, Reddy KC, Guerra S, Rieger M, Hart MP, Srinivasan J, Chalasani SH. PMID: 38781440; PMCID: PMC11304965.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    10. Identification and characterization of a skin microbiome on Caenorhabditis elegans suggests environmental microbes confer cuticle protection. Microbiol Spectr. 2024 Aug 06; 12(8):e0016924. Haghani NB, Lampe RH, Samuel BS, Chalasani SH, Matty MA. PMID: 38980017; PMCID: PMC11302229.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    11. Molecular and Clinical Determinants of Acquired Resistance and Treatment Duration for Targeted Therapies in Colorectal Cancer. Clin Cancer Res. 2024 Jun 14; 30(12):2672-2683. Harrold E, Keane F, Walch H, Chou JF, Sinopoli J, Palladino S, Al-Rawi DH, Chadalavada K, Manca P, Chalasani S, Yang J, Cercek A, Shia J, Capanu M, Bakhoum SF, Schultz N, Chatila WK, Yaeger R. PMID: 38502113; PMCID: PMC11176917.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    12. C. elegans foraging as a model for understanding the neuronal basis of decision-making. Cell Mol Life Sci. 2024 Jun 08; 81(1):252. Haley JA, Chalasani SH. PMID: 38849591; PMCID: PMC11335288.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    13. Ocean to Tree: Leveraging Single-Molecule RNA-Seq to Repair Genome Gene Models and Improve Phylogenomic Analysis of Gene and Species Evolution. Methods Mol Biol. 2024; 2757:461-490. Hsiao J, Deng LC, Moroz LL, Chalasani SH, Edsinger E. PMID: 38668979; PMCID: PMC11112408.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    14. Conserved autism-associated genes tune social feeding behavior in C. elegans. bioRxiv. 2023 Dec 06. Cowen MH, Reddy KC, Chalasani SH, Hart MP. PMID: 38106124; PMCID: PMC10723370.
      View in: PubMed   Mentions:
    15. Dopamine signaling regulates predator-driven changes in Caenorhabditis elegans' egg laying behavior. Elife. 2023 07 11; 12. Pribadi A, Rieger MA, Rosales K, Reddy KC, Chalasani SH. PMID: 37431892; PMCID: PMC10335835.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    16. Mutational analysis of mechanosensitive ion channels in the carnivorous Venus flytrap plant. Curr Biol. 2023 08 07; 33(15):3257-3264.e4. Procko C, Wong WM, Patel J, Mousavi SAR, Dabi T, Duque M, Baird L, Chalasani SH, Chory J. PMID: 37437572; PMCID: PMC10528943.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    17. Flexible reprogramming of Pristionchus pacificus motivation for attacking Caenorhabditis elegans in predator-prey competition. Curr Biol. 2023 Feb 27; 33(4):790. Quach KT, Chalasani SH. PMID: 36854264; PMCID: PMC10004616.
      View in: PubMed   Mentions:    Fields:    
    18. Fear conditioning in invertebrates. Front Behav Neurosci. 2022; 16:1008818. Pribadi AK, Chalasani SH. PMID: 36439964; PMCID: PMC9686301.
      View in: PubMed   Mentions: 3  
    19. Well-free agglomeration and on-demand three-dimensional cell cluster formation using guided surface acoustic waves through a couplant layer. Biomed Microdevices. 2022 05 21; 24(2):18. Mei J, Vasan A, Magaram U, Takemura K, Chalasani SH, Friend J. PMID: 35596837; PMCID: PMC9124176.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    20. Intestine-to-neuronal signaling alters risk-taking behaviors in food-deprived Caenorhabditis elegans. PLoS Genet. 2022 05; 18(5):e1010178. Matty MA, Lau HE, Haley JA, Singh A, Chakraborty A, Kono K, Reddy KC, Hansen M, Chalasani SH. PMID: 35511794; PMCID: PMC9070953.
      View in: PubMed   Mentions: 14     Fields:    Translation:Animals
    21. Two pathways are required for ultrasound-evoked behavioral changes in Caenorhabditis elegans. PLoS One. 2022; 17(5):e0267698. Magaram U, Weiss C, Vasan A, Reddy KC, Friend J, Chalasani SH. PMID: 35511952; PMCID: PMC9071135.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    22. Epidermal Growth Factor Receptor Inhibition in Epidermal Growth Factor Receptor-Amplified Gastroesophageal Cancer: Retrospective Global Experience. J Clin Oncol. 2022 08 01; 40(22):2458-2467. Maron SB, Moya S, Morano F, Emmett MJ, Chou JF, Sabwa S, Walch H, Peterson B, Schrock AB, Zhang L, Janjigian YY, Chalasani S, Ku GY, Disel U, Enzinger P, Uboha N, Kato S, Yoshino T, Shitara K, Nakamura Y, Saeed A, Kasi PM, Chao J, Lee J, Capanu M, Wainberg Z, Petty R, Pietrantonio F, Klempner SJ, Catenacci DVT. PMID: 35349370; PMCID: PMC9467681.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    23. Flexible reprogramming of Pristionchus pacificus motivation for attacking Caenorhabditis elegans in predator-prey competition. Curr Biol. 2022 04 25; 32(8):1675-1688.e7. Quach KT, Chalasani SH. PMID: 35259340; PMCID: PMC9050875.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    24. Publisher Correction: Sonogenetic control of mammalian cells using exogenous transient receptor potential A1 channels. Nat Commun. 2022 Feb 25; 13(1):1130. Duque M, Lee-Kubli CA, Tufail Y, Magaram U, Patel J, Chakraborty A, Mendoza Lopez J, Edsinger E, Vasan A, Shiao R, Weiss C, Friend J, Chalasani SH. PMID: 35217673; PMCID: PMC8881586.
      View in: PubMed   Mentions: 4     Fields:    
    25. Microscale concert hall acoustics to produce uniform ultrasound stimulation for targeted sonogenetics in hsTRPA1-transfected cells. Adv Nanobiomed Res. 2022 May; 2(5). Vasan A, Allein F, Duque M, Magaram U, Boechler N, Chalasani SH, Friend J. PMID: 36060550; PMCID: PMC9431988.
      View in: PubMed   Mentions: 3  
    26. Sonogenetic control of mammalian cells using exogenous Transient Receptor Potential A1 channels. Nat Commun. 2022 02 09; 13(1):600. Duque M, Lee-Kubli CA, Tufail Y, Magaram U, Patel J, Chakraborty A, Mendoza Lopez J, Edsinger E, Vasan A, Shiao R, Weiss C, Friend J, Chalasani SH. PMID: 35140203; PMCID: PMC8828769.
      View in: PubMed   Mentions: 56     Fields:    Translation:HumansAnimalsCells
    27. Neural network features distinguish chemosensory stimuli in Caenorhabditis elegans. PLoS Comput Biol. 2021 11; 17(11):e1009591. How JJ, Navlakha S, Chalasani SH. PMID: 34752447; PMCID: PMC8604368.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    28. Ultrasound Mediated Cellular Deflection Results in Cellular Depolarization. Adv Sci (Weinh). 2022 01; 9(2):e2101950. Vasan A, Orosco J, Magaram U, Duque M, Weiss C, Tufail Y, Chalasani SH, Friend J. PMID: 34747144; PMCID: PMC8805560.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    29. 1-Undecene from Pseudomonas aeruginosa is an olfactory signal for flight-or-fight response in Caenorhabditis elegans. EMBO J. 2021 07 01; 40(13):e106938. Prakash D, Ms A, Radhika B, Venkatesan R, Chalasani SH, Singh V. PMID: 34086368; PMCID: PMC8246062.
      View in: PubMed   Mentions: 24     Fields:    Translation:AnimalsCells
    30. Intraguild predation between Pristionchus pacificus and Caenorhabditis elegans: a complex interaction with the potential for aggressive behaviour. J Neurogenet. 2020 Sep-Dec; 34(3-4):404-419. Quach KT, Chalasani SH. PMID: 33054476; PMCID: PMC7836027.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    31. Microbial Mind Control. Cell Host Microbe. 2020 08 12; 28(2):147-149. Matty MA, Chalasani SH. PMID: 32791104.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    32. Predator-secreted sulfolipids induce defensive responses in C. elegans. Nat Commun. 2018 03 19; 9(1):1128. Liu Z, Kariya MJ, Chute CD, Pribadi AK, Leinwand SG, Tong A, Curran KP, Bose N, Schroeder FC, Srinivasan J, Chalasani SH. PMID: 29555902; PMCID: PMC5859177.
      View in: PubMed   Mentions: 31     Fields:    Translation:AnimalsCells
    33. Altered Sensory Code Drives Juvenile-to-Adult Behavioral Maturation in Caenorhabditis elegans. eNeuro. 2016 Nov-Dec; 3(6). Hale LA, Lee ES, Pantazis AK, Chronis N, Chalasani SH. PMID: 28083560; PMCID: PMC5220224.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    34. Corrigendum: Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans. Nature. 2016 May 05; 533(7601):130. Chalasani SH, Chronis N, Tsunozaki M, Gray JM, Ramot D, Goodman MB, Bargmann CI. PMID: 26789243.
      View in: PubMed   Mentions: 4     Fields:    
    35. Circuit mechanisms encoding odors and driving aging-associated behavioral declines in Caenorhabditis elegans. Elife. 2015 Sep 22; 4:e10181. Leinwand SG, Yang CJ, Bazopoulou D, Chronis N, Srinivasan J, Chalasani SH. PMID: 26394000; PMCID: PMC4577979.
      View in: PubMed   Mentions: 33     Fields:    Translation:AnimalsCells
    36. Sonogenetics is a non-invasive approach to activating neurons in Caenorhabditis elegans. Nat Commun. 2015 Sep 15; 6:8264. Ibsen S, Tong A, Schutt C, Esener S, Chalasani SH. PMID: 26372413; PMCID: PMC4571289.
      View in: PubMed   Mentions: 166     Fields:    Translation:AnimalsCells
    37. Neural Mechanisms for Evaluating Environmental Variability in Caenorhabditis elegans. Neuron. 2015 Apr 22; 86(2):428-41. Calhoun AJ, Tong A, Pokala N, Fitzpatrick JA, Sharpee TO, Chalasani SH. PMID: 25864633; PMCID: PMC4409562.
      View in: PubMed   Mentions: 50     Fields:    Translation:AnimalsCells
    38. A microfluidic system for studying the behavior of zebrafish larvae under acute hypoxia. Lab Chip. 2015 Feb 07; 15(3):857-66. Erickstad M, Hale LA, Chalasani SH, Groisman A. PMID: 25490410.
      View in: PubMed   Mentions: 14     Fields:    Translation:Animals
    39. Maximally informative foraging by Caenorhabditis elegans. Elife. 2014 Dec 09; 3. Calhoun AJ, Chalasani SH, Sharpee TO. PMID: 25490069; PMCID: PMC4358340.
      View in: PubMed   Mentions: 68     Fields:    Translation:Animals
    40. From genes to circuits and behaviors: Neuropeptides expand the coding potential of the nervous system. Worm. 2014; 3:e27730. Leinwand SG, Chalasani SH. PMID: 25254145; PMCID: PMC4165544.
      View in: PubMed   Mentions: 5  
    41. Divergent and convergent roles for insulin-like peptides in the worm, fly and mammalian nervous systems. Invert Neurosci. 2014 Sep; 14(2):71-8. Lau HE, Chalasani SH. PMID: 24395463; PMCID: PMC4163192.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimals
    42. Helium Ion Microscopy (HIM) for the imaging of biological samples at sub-nanometer resolution. Sci Rep. 2013 Dec 17; 3:3514. Joens MS, Huynh C, Kasuboski JM, Ferranti D, Sigal YJ, Zeitvogel F, Obst M, Burkhardt CJ, Curran KP, Chalasani SH, Stern LA, Goetze B, Fitzpatrick JA. PMID: 24343236; PMCID: PMC3865489.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimalsCells
    43. Information theory of adaptation in neurons, behavior, and mood. Curr Opin Neurobiol. 2014 Apr; 25:47-53. Sharpee TO, Calhoun AJ, Chalasani SH. PMID: 24709600; PMCID: PMC3982190.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    44. Neuropeptide signaling remodels chemosensory circuit composition in Caenorhabditis elegans. Nat Neurosci. 2013 Oct; 16(10):1461-7. Leinwand SG, Chalasani SH. PMID: 24013594; PMCID: PMC3786745.
      View in: PubMed   Mentions: 59     Fields:    Translation:AnimalsCells
    45. Serotonin circuits and anxiety: what can invertebrates teach us? Invert Neurosci. 2012 Dec; 12(2):81-92. Curran KP, Chalasani SH. PMID: 22918570; PMCID: PMC3505513.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimals
    46. Olfactory networks: from sensation to perception. Curr Opin Genet Dev. 2011 Dec; 21(6):806-11. Leinwand SG, Chalasani SH. PMID: 21889328.
      View in: PubMed   Mentions: 37     Fields:    Translation:AnimalsCells
    47. Neuropeptide feedback modifies odor-evoked dynamics in Caenorhabditis elegans olfactory neurons. Nat Neurosci. 2010 May; 13(5):615-21. Chalasani SH, Kato S, Albrecht DR, Nakagawa T, Abbott LF, Bargmann CI. PMID: 20364145; PMCID: PMC2937567.
      View in: PubMed   Mentions: 153     Fields:    Translation:HumansAnimalsCells
    48. Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators. Nat Methods. 2009 Dec; 6(12):875-81. Tian L, Hires SA, Mao T, Huber D, Chiappe ME, Chalasani SH, Petreanu L, Akerboom J, McKinney SA, Schreiter ER, Bargmann CI, Jayaraman V, Svoboda K, Looger LL. PMID: 19898485; PMCID: PMC2858873.
      View in: PubMed   Mentions: 1134     Fields:    Translation:HumansAnimalsCells
    49. A hub-and-spoke circuit drives pheromone attraction and social behaviour in C. elegans. Nature. 2009 Apr 30; 458(7242):1171-5. Macosko EZ, Pokala N, Feinberg EH, Chalasani SH, Butcher RA, Clardy J, Bargmann CI. PMID: 19349961; PMCID: PMC2760495.
      View in: PubMed   Mentions: 291     Fields:    Translation:AnimalsCells
    50. A behavioral switch: cGMP and PKC signaling in olfactory neurons reverses odor preference in C. elegans. Neuron. 2008 Sep 25; 59(6):959-71. Tsunozaki M, Chalasani SH, Bargmann CI. PMID: 18817734; PMCID: PMC2586605.
      View in: PubMed   Mentions: 92     Fields:    Translation:AnimalsCells
    51. Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans. Nature. 2007 Nov 01; 450(7166):63-70. Chalasani SH, Chronis N, Tsunozaki M, Gray JM, Ramot D, Goodman MB, Bargmann CI. PMID: 17972877.
      View in: PubMed   Mentions: 359     Fields:    Translation:AnimalsCells
    52. Stromal cell-derived factor-1 antagonizes slit/robo signaling in vivo. J Neurosci. 2007 Jan 31; 27(5):973-80. Chalasani SH, Sabol A, Xu H, Gyda MA, Rasband K, Granato M, Chien CB, Raper JA. PMID: 17267551; PMCID: PMC6673187.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
    53. Global 'worming'. Genome Biol. 2007; 8(9):314. Chalasani SH, Feinberg EH, Hilliard MA. PMID: 17875222; PMCID: PMC2375015.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    54. The neurotransmitter glutamate reduces axonal responsiveness to multiple repellents through the activation of metabotropic glutamate receptor 1. J Neurosci. 2004 Aug 11; 24(32):7085-95. Kreibich TA, Chalasani SH, Raper JA. PMID: 15306642; PMCID: PMC6729176.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    55. Phytochelatin synthase, a dipeptidyltransferase that undergoes multisite acylation with gamma-glutamylcysteine during catalysis: stoichiometric and site-directed mutagenic analysis of arabidopsis thaliana PCS1-catalyzed phytochelatin synthesis. J Biol Chem. 2004 May 21; 279(21):22449-60. Vatamaniuk OK, Mari S, Lang A, Chalasani S, Demkiv LO, Rea PA. PMID: 15004013.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    56. The chemokine stromal cell-derived factor-1 promotes the survival of embryonic retinal ganglion cells. J Neurosci. 2003 Jun 01; 23(11):4601-12. Chalasani SH, Baribaud F, Coughlan CM, Sunshine MJ, Lee VM, Doms RW, Littman DR, Raper JA. PMID: 12805300; PMCID: PMC6740796.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    57. A chemokine, SDF-1, reduces the effectiveness of multiple axonal repellents and is required for normal axon pathfinding. J Neurosci. 2003 Feb 15; 23(4):1360-71. Chalasani SH, Sabelko KA, Sunshine MJ, Littman DR, Raper JA. PMID: 12598624; PMCID: PMC6742262.
      View in: PubMed   Mentions: 98     Fields:    Translation:AnimalsCells
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