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Sadik Esener

TitleProfessor
InstitutionUniversity of California San Diego
DepartmentNanoengineering
Address9500 Gilman Drive #0815
La Jolla CA 92093
Phone858-534-9997
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    Collapse Research 
    Collapse Research Activities and Funding
    Nanoparticle Enabled L-asparaginase Therapy for CLL
    NIH/NCI R21CA173330Aug 21, 2013 - Jul 31, 2015
    Role: Principal Investigator
    Stimulus-Responsive Microbubbles for Site-Specific Imaging of Thrombosis
    NIH/NIBIB R21EB012758Jul 15, 2011 - Jun 30, 2013
    Role: Principal Investigator
    Center of Nanotechnology for Treatment, Understanding, *
    NIH/NCI U54CA119335Sep 30, 2005 - Dec 31, 2011
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Ashwanikumar N, Plaut JS, Mostofian B, Patel S, Kwak P, Sun C, McPhail K, Zuckerman DM, Esener S, Sahay G. Supramolecular self assembly of nanodrill-like structures for intracellular delivery. J Control Release. 2018 Mar 01. PMID: 29501722.
      View in: PubMed
    2. Ibsen S, Mora R, Shi G, Schutt C, Cui W, Benchimol M, Serra V, Esener S. Removal of ligand-bound liposomes from cell surfaces by microbubbles exposed to ultrasound. J Biol Phys. 2017 Dec; 43(4):493-510. PMID: 29124623.
      View in: PubMed
    3. Erdal E, Demirbilek M, Yeh Y, Akbal Ö, Ruff L, Bozkurt D, Cabuk A, Senel Y, Gumuskaya B, Algin O, Colak S, Esener S, Denkbas EB. A Comparative Study of Receptor-Targeted Magnetosome and HSA-Coated Iron Oxide Nanoparticles as MRI Contrast-Enhancing Agent in Animal Cancer Model. Appl Biochem Biotechnol. 2018 May; 185(1):91-113. PMID: 29082480.
      View in: PubMed
    4. Schutt C, Ibsen S, Zahavy E, Aryal S, Kuo S, Esener S, Berns M, Esener S. Drug Delivery Nanoparticles with Locally Tunable Toxicity Made Entirely from a Light-Activatable Prodrug of Doxorubicin. Pharm Res. 2017 Oct; 34(10):2025-2035. PMID: 28791550.
      View in: PubMed
    5. Ibsen SD, Wright J, Lewis JM, Kim S, Ko SY, Ong J, Manouchehri S, Vyas A, Akers J, Chen CC, Carter BS, Esener S, Heller MJ. Rapid Isolation and Detection of Exosomes and Associated Biomarkers from Plasma. ACS Nano. 2017 Jul 25; 11(7):6641-6651. PMID: 28671449.
      View in: PubMed
    6. Olson ES, Ortac I, Malone C, Esener S, Mattrey R. Ultrasound Detection of Regional Oxidative Stress in Deep Tissues Using Novel Enzyme Loaded Nanoparticles. Adv Healthc Mater. 2017 Mar; 6(5). PMID: 28081299.
      View in: PubMed
    7. El-Sayed AS, Ruff LE, Ghany SE, Ali GS, Esener S. Molecular and Spectroscopic Characterization of Aspergillus flavipes and Pseudomonas putida L-Methionine ?-Lyase in Vitro. Appl Biochem Biotechnol. 2017 Apr; 181(4):1513-1532. PMID: 27796875.
      View in: PubMed
    8. Ruff LE, Sapre AA, Plaut JS, De Maere E, Mortier C, Nguyen V, Separa K, Vandenbogaerde S, Vandewalle L, Esener S, Messmer BT. Selection of DNA nanoparticles with preferential binding to aggregated protein target. Nucleic Acids Res. 2016 06 02; 44(10):e96. PMID: 26969734; PMCID: PMC4889931.
    9. Soto F, Martin A, Ibsen S, Vaidyanathan M, Garcia-Gradilla V, Levin Y, Escarpa A, Esener S, Wang J. Acoustic Microcannons: Toward Advanced Microballistics. ACS Nano. 2016 Jan 26; 10(1):1522-8. PMID: 26691444.
      View in: PubMed
    10. Ibsen S, Tong A, Schutt C, Esener S, Chalasani SH. Sonogenetics is a non-invasive approach to activating neurons in Caenorhabditis elegans. Nat Commun. 2015 Sep 15; 6:8264. PMID: 26372413; PMCID: PMC4571289.
    11. El-Sayed AS, Yassin MA, Khalaf SA, El-Batrik M, Ali GS, Esener S. Biochemical and Pharmacokinetic Properties of PEGylated Cystathionine ?-Lyase from Aspergillus carneus KF723837. J Mol Microbiol Biotechnol. 2015; 25(5):301-10. PMID: 26316161.
      View in: PubMed
    12. Ibsen S, Sonnenberg A, Schutt C, Mukthavaram R, Yeh Y, Ortac I, Manouchehri S, Kesari S, Esener S, Heller MJ. Recovery of Drug Delivery Nanoparticles from Human Plasma Using an Electrokinetic Platform Technology. Small. 2015 Oct; 11(38):5088-96. PMID: 26274918; PMCID: PMC4863177 [Available on 10/01/16].
    13. El-Sayed AS, Abdel-Azeim S, Ibrahim HM, Yassin MA, Abdel-Ghany SE, Esener S, Ali GS. Biochemical stability and molecular dynamic characterization of Aspergillus fumigatus cystathionine ?-lyase in response to various reaction effectors. Enzyme Microb Technol. 2015 Dec; 81:31-46. PMID: 26453470.
      View in: PubMed
    14. Schutt CE, Ibsen S, Benchimol M, Hsu M, Esener S. Optical detection of harmonic oscillations in fluorescent dye-loaded microbubbles ensonified by ultrasound. Opt Lett. 2015 Jun 15; 40(12):2834-7. PMID: 26076274.
      View in: PubMed
    15. Campbell DF, Saenz R, Bharati IS, Seible D, Zhang L, Esener S, Messmer B, Larsson M, Messmer D. Enhanced anti-tumor immune responses and delay of tumor development in human epidermal growth factor receptor 2 mice immunized with an immunostimulatory peptide in poly(D,L-lactic-co-glycolic) acid nanoparticles. Breast Cancer Res. 2015 Mar 31; 17:48. PMID: 25882711; PMCID: PMC4407876.
    16. Schutt CE, Ibsen SD, Thrift W, Esener S. The influence of distance between microbubbles on the fluid flow produced during ultrasound exposure. J Acoust Soc Am. 2014 Dec; 136(6):3422. PMID: 25480086; PMCID: PMC4257971.
    17. Saenz R, Futalan D, Leutenez L, Eekhout F, Fecteau JF, Sundelius S, Sundqvist S, Larsson M, Hayashi T, Minev B, Carson D, Esener S, Messmer B, Messmer D. TLR4-dependent activation of dendritic cells by an HMGB1-derived peptide adjuvant. J Transl Med. 2014 Aug 14; 12:211. PMID: 25123824; PMCID: PMC4261565.
    18. Ibsen S, Shi G, Schutt C, Shi L, Suico KD, Benchimol M, Serra V, Simberg D, Berns M, Esener S. The behavior of lipid debris left on cell surfaces from microbubble based ultrasound molecular imaging. Ultrasonics. 2014 Dec; 54(8):2090-8. PMID: 25059435; PMCID: PMC4151124.
    19. Baghdadchi S, Liu K, Knapp J, Prager G, Graves S, Akrami K, Manuel R, Bastos R, Reid E, Carson D, Esener S, Carson J, Liu YT. An innovative system for 3D clinical photography in the resource-limited settings. J Transl Med. 2014 Jun 15; 12:169. PMID: 24929434; PMCID: PMC4065604.
    20. Schutt CE, Ibsen SD, Benchimol MJ, Hsu MJ, Esener S. Manipulating nanoscale features on the surface of dye-loaded microbubbles to increase their ultrasound-modulated fluorescence output. Small. 2014 Aug 27; 10(16):3316-24. PMID: 24839198; PMCID: PMC4142090.
    21. Ortac I, Simberg D, Yeh YS, Yang J, Messmer B, Trogler WC, Tsien RY, Esener S. Dual-porosity hollow nanoparticles for the immunoprotection and delivery of nonhuman enzymes. Nano Lett. 2014 Jun 11; 14(6):3023-32. PMID: 24471767; PMCID: PMC4059531.
    22. Nakatsuka MA, Barback CV, Fitch KR, Farwell AR, Esener S, Mattrey RF, Cha JN, Goodwin AP. In vivo ultrasound visualization of non-occlusive blood clots with thrombin-sensitive contrast agents. Biomaterials. 2013 Dec; 34(37):9559-65. PMID: 24034499; PMCID: PMC3788116.
    23. Ibsen S, Su Y, Norton J, Zahavy E, Hayashi T, Adams S, Wrasidlo W, Esener S. Extraction protocol and mass spectrometry method for quantification of doxorubicin released locally from prodrugs in tumor tissue. J Mass Spectrom. 2013 Jul; 48(7):768-73. PMID: 23832932; PMCID: PMC4110111.
    24. Ibsen S, Schutt CE, Esener S. Microbubble-mediated ultrasound therapy: a review of its potential in cancer treatment. Drug Des Devel Ther. 2013; 7:375-88. PMID: 23667309; PMCID: PMC3650568.
    25. Yoon I, Baker SE, Kim K, Fischer NO, Heineck D, Wang Y, Esener S, Sirbuly DJ. Nanofiber near-field light-matter interactions for enhanced detection of molecular level displacements and dynamics. Nano Lett. 2013 Apr 10; 13(4):1440-5. PMID: 23517010.
      View in: PubMed
    26. Shi G, Cui W, Benchimol M, Liu YT, Mattrey RF, Mukthavaram R, Kesari S, Esener S, Simberg D. Isolation of rare tumor cells from blood cells with buoyant immuno-microbubbles. PLoS One. 2013; 8(3):e58017. PMID: 23516425; PMCID: PMC3596333.
    27. Ibsen S, Zahavy E, Wrasidlo W, Hayashi T, Norton J, Su Y, Adams S, Esener S. Localized in vivo activation of a photoactivatable doxorubicin prodrug in deep tumor tissue. Photochem Photobiol. 2013 May-Jun; 89(3):698-708. PMID: 23311544; PMCID: PMC4072807.
    28. Benchimol MJ, Hsu MJ, Schutt CE, Hall DJ, Mattrey RF, Esener S. Phospholipid/Carbocyanine Dye-Shelled Microbubbles as Ultrasound-Modulated Fluorescent Contrast Agents. Soft Matter. 2013 Jan 01; 9(8):2384-2388. PMID: 23526919.
      View in: PubMed
    29. Yoon I, Baker SE, Kim K, Wang Y, Esener S, Sirbuly DJ. Profiling the evanescent field of nanofiber waveguides using self-assembled polymer coatings. Nanoscale. 2013 Jan 21; 5(2):552-5. PMID: 23232981.
      View in: PubMed
    30. Nakatsuka MA, Mattrey RF, Esener S, Cha JN, Goodwin AP. Aptamer-crosslinked microbubbles: smart contrast agents for thrombin-activated ultrasound imaging. Adv Mater. 2012 Nov 27; 24(45):6010-6. PMID: 22941789; PMCID: PMC3626403.
    31. Kagan D, Benchimol MJ, Claussen JC, Chuluun-Erdene E, Esener S, Wang J. Acoustic droplet vaporization and propulsion of perfluorocarbon-loaded microbullets for targeted tissue penetration and deformation. Angew Chem Int Ed Engl. 2012 Jul 23; 51(30):7519-22. PMID: 22692791; PMCID: PMC3477603.
    32. Ibsen S, Benchimol M, Esener S. Fluorescent microscope system to monitor real-time interactions between focused ultrasound, echogenic drug delivery vehicles, and live cell membranes. Ultrasonics. 2013 Jan; 53(1):178-84. PMID: 22749476; PMCID: PMC3484231.
    33. Yoon I, Kim K, Baker SE, Heineck D, Esener S, Sirbuly DJ. Stimulus-responsive light coupling and modulation with nanofiber waveguide junctions. Nano Lett. 2012 Apr 11; 12(4):1905-11. PMID: 22449127.
      View in: PubMed
    34. Karmali PP, Chao Y, Park JH, Sailor MJ, Ruoslahti E, Esener S, Simberg D. Different effect of hydrogelation on antifouling and circulation properties of dextran-iron oxide nanoparticles. Mol Pharm. 2012 Mar 05; 9(3):539-45. PMID: 22243419; PMCID: PMC3295900.
    35. Ibsen S, Benchimol M, Simberg D, Esener S. Ultrasound mediated localized drug delivery. Adv Exp Med Biol. 2012; 733:145-53. PMID: 22101720.
      View in: PubMed
    36. Nakatsuka MA, Hsu MJ, Esener S, Cha JN, Goodwin AP. DNA-coated microbubbles with biochemically tunable ultrasound contrast activity. Adv Mater. 2011 Nov 09; 23(42):4908-12. PMID: 21956383; PMCID: PMC3622060.
    37. Clawson C, Ton L, Aryal S, Fu V, Esener S, Zhang L. Synthesis and characterization of lipid-polymer hybrid nanoparticles with pH-triggered poly(ethylene glycol) shedding. Langmuir. 2011 Sep 06; 27(17):10556-61. PMID: 21806013; PMCID: PMC3166210.
    38. Ibsen S, Benchimol M, Simberg D, Schutt C, Steiner J, Esener S. A novel nested liposome drug delivery vehicle capable of ultrasound triggered release of its payload. J Control Release. 2011 Nov 07; 155(3):358-66. PMID: 21745505; PMCID: PMC3196035.
    39. Hsu MJ, Eghtedari M, Goodwin AP, Hall DJ, Mattrey RF, Esener S. Characterization of individual ultrasound microbubble dynamics with a light-scattering system. J Biomed Opt. 2011 Jun; 16(6):067002. PMID: 21721823; PMCID: PMC3124534.
    40. Nakatsuka MA, Lee JH, Nakayama E, Hung AM, Hsu MJ, Mattrey RF, Esener S, Cha JN, Goodwin AP. Facile One-Pot Synthesis of Polymer-Phospholipid Composite Microbubbles with Enhanced Drug Loading Capacity for Ultrasound-Triggered Therapy. Soft Matter. 2011; 2011(7):1656-1659. PMID: 21799701.
      View in: PubMed
    41. Erten A, Hall D, Hoh C, Tran Cao HS, Kaushal S, Esener S, Hoffman RM, Bouvet M, Chen J, Kesari S, Makale M. Enhancing magnetic resonance imaging tumor detection with fluorescence intensity and lifetime imaging. J Biomed Opt. 2010 Nov-Dec; 15(6):066012. PMID: 21198186; PMCID: PMC3014225.
    42. Erten A, Wrasidlo W, Scadeng M, Esener S, Hoffman RM, Bouvet M, Makale M. Magnetic resonance and fluorescence imaging of doxorubicin-loaded nanoparticles using a novel in vivo model. Nanomedicine. 2010 Dec; 6(6):797-807. PMID: 20599526; PMCID: PMC2980586.
    43. Ibsen S, Zahavy E, Wrasdilo W, Berns M, Chan M, Esener S. A novel Doxorubicin prodrug with controllable photolysis activation for cancer chemotherapy. Pharm Res. 2010 Sep; 27(9):1848-60. PMID: 20596761; PMCID: PMC2916115.
    44. Hu CM, Kaushal S, Tran Cao HS, Aryal S, Sartor M, Esener S, Bouvet M, Zhang L. Half-antibody functionalized lipid-polymer hybrid nanoparticles for targeted drug delivery to carcinoembryonic antigen presenting pancreatic cancer cells. Mol Pharm. 2010 Jun 07; 7(3):914-20. PMID: 20394436; PMCID: PMC2884057.
    45. Clawson C, Huang CT, Futalan D, Seible DM, Saenz R, Larsson M, Ma W, Minev B, Zhang F, Ozkan M, Ozkan C, Esener S, Messmer D. Delivery of a peptide via poly(D,L-lactic-co-glycolic) acid nanoparticles enhances its dendritic cell-stimulatory capacity. Nanomedicine. 2010 Oct; 6(5):651-61. PMID: 20348031; PMCID: PMC2947606.
    46. Steiner JM, Sartor M, Sanchez AB, Messmer D, Freed A, Esener S, Messmer BT. DeNAno: Selectable deoxyribonucleic acid nanoparticle libraries. J Biotechnol. 2010 Feb 15; 145(4):330-3. PMID: 19963022; PMCID: PMC2822443.
    47. Krishnan R, Dehlinger DA, Gemmen GJ, Mifflin RL, Esener S, Heller MJ. Interaction of Nanoparticles at the DEP Microelectrode Interface under High Conductance Conditions. Electrochem commun. 2009 Aug; 11(8):1661-1666. PMID: 20160949.
      View in: PubMed
    48. Dehlinger DA, Sullivan BD, Esener S, Heller MJ. Directed hybridization of DNA derivatized nanoparticles into higher order structures. Nano Lett. 2008 Nov; 8(11):4053-60. PMID: 18837562.
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    49. Marciniak J, Kummel A, Esener S, Heller M, Messmer B. Coupled rolling circle amplification loop-mediated amplification for rapid detection of short DNA sequences. Biotechniques. 2008 Sep; 45(3):275-80. PMID: 18778251.
      View in: PubMed
    50. Krishnan R, Sullivan BD, Mifflin RL, Esener S, Heller MJ. Alternating current electrokinetic separation and detection of DNA nanoparticles in high-conductance solutions. Electrophoresis. 2008 May; 29(9):1765-74. PMID: 18393345.
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    51. Song D, Gauss V, Zhang H, Gross M, Wen P, Esener S. All-optical flip-flop based on vertical cavity semiconductor optical amplifiers. Opt Lett. 2007 Oct 15; 32(20):2969-71. PMID: 17938669.
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    52. Finkelstein H, Hsu MJ, Zlatanovic S, Esener S. Performance trade-offs in single-photon avalanche diode miniaturization. Rev Sci Instrum. 2007 Oct; 78(10):103103. PMID: 17979402.
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    53. Walker E, Dvornikov A, Coblentz K, Esener S, Rentzepis P. Toward terabyte two-photon 3D disk. Opt Express. 2007 Sep 17; 15(19):12264-76. PMID: 19547595.
      View in: PubMed
    54. Zhang H, Gauss V, Wen P, Esener S. Observation of wavelength and multiple bistabilities in 850nm Vertical-Cavity Semiconductor Optical Amplifiers (VCSOAs). Opt Express. 2007 Sep 03; 15(18):11723-30. PMID: 19547533.
      View in: PubMed
    55. Song D, Zhang H, Wen P, Gross M, Esener S. Misalignment correction for optical interconnects using vertical cavity semiconductor optical amplifiers. Appl Opt. 2007 Aug 01; 46(22):5168-75. PMID: 17676128.
      View in: PubMed
    56. Dehlinger DA, Sullivan BD, Esener S, Heller MJ. Electric-field-directed assembly of biomolecular-derivatized nanoparticles into higher-order structures. Small. 2007 Jul; 3(7):1237-44. PMID: 17554769.
      View in: PubMed
    57. Zhang H, Wen P, Esener S. Cascadable all-optical inverter based on a nonlinear vertical-cavity semiconductor optical amplifier. Opt Lett. 2007 Jul 01; 32(13):1884-6. PMID: 17603602.
      View in: PubMed
    58. Shao B, Shi LZ, Nascimento JM, Botvinick EL, Ozkan M, Berns MW, Esener S. High-throughput sorting and analysis of human sperm with a ring-shaped laser trap. Biomed Microdevices. 2007 Jun; 9(3):361-9. PMID: 17226100.
      View in: PubMed
    59. Marki CF, Jorgesen DR, Zhang H, Wen P, Esener S. Observation of counterclockwise, clockwise and butterfly bistabilty in 1550 nm VCSOAs. Opt Express. 2007 Apr 16; 15(8):4953-9. PMID: 19532744.
      View in: PubMed
    60. Shao B, Jaffe JS, Chachisvilis M, Esener S. Angular resolved light scattering for discriminating among marine picoplankton: modeling and experimental measurements. Opt Express. 2006 Dec 11; 14(25):12473-84. PMID: 19529681.
      View in: PubMed
    61. Shao B, Esener S, Nascimento JM, Berns MW, Botvinick EL, Ozkan M. Size tunable three-dimensional annular laser trap based on axicons. Opt Lett. 2006 Nov 15; 31(22):3375-7. PMID: 17072428.
      View in: PubMed
    62. Wen P, Sanchez M, Gross M, Esener S. Optical bistability in vertical-cavity semiconductor optical amplifiers. Appl Opt. 2006 Sep 01; 45(25):6349-57. PMID: 16912770.
      View in: PubMed
    63. Shao B, Esener S, Nascimento JM, Botvinick EL, Berns MW. Dynamically adjustable annular laser trapping based on axicons. Appl Opt. 2006 Sep 01; 45(25):6421-8. PMID: 16912778.
      View in: PubMed
    64. Birkbeck AL, Zlatanovic S, Esener S. Self-aligned spatial filtering using laser optical tweezers. Appl Opt. 2006 Sep 01; 45(25):6429-34. PMID: 16912779.
      View in: PubMed
    65. Birkbeck AL, Zlatanovic S, Esener S, Ozkan M. Laser-tweezer-controlled solid immersion microscopy in microfluidic systems. Opt Lett. 2005 Oct 15; 30(20):2712-4. PMID: 16252750.
      View in: PubMed
    66. Song D, Sanchez M, Gross M, Esener S. Micro gradient-index conical lenses: simulation and fabrication methods. Appl Opt. 2005 Jun 20; 44(18):3747-51. PMID: 15989049.
      View in: PubMed
    67. Flynn RA, Shao B, Chachisvilis M, Ozkan M, Esener S. Two-beam optical traps: refractive index and size measurements of microscale objects. Biomed Microdevices. 2005 Jun; 7(2):93-7. PMID: 15940421.
      View in: PubMed
    68. Flynn RA, Shao B, Chachisvilis M, Ozkan M, Esener S. Counter-propagating optical trapping system for size and refractive index measurement of microparticles. Biosens Bioelectron. 2006 Jan 15; 21(7):1029-36. PMID: 16368481.
      View in: PubMed
    69. Sánchez M, Wen P, Gross M, Esener S. Polarization anisotropy in vertical-cavity semiconductor optical amplifiers. Opt Lett. 2004 Aug 15; 29(16):1888-90. PMID: 15357349.
      View in: PubMed
    70. Forster AH, Wang MM, Butler WF, Chachisvilis M, Chung TD, Esener S, Hall JM, Kibar O, Lykstad K, Marchand PJ, Mercer EM, Pestana LM, Sur S, Tu E, Yang R, Zhang H, Kariv I. Use of moving optical gradient fields for analysis of apoptotic cellular responses in a chronic myeloid leukemia cell model. Anal Biochem. 2004 Apr 01; 327(1):14-22. PMID: 15033506.
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    71. Sánchez M, Wen P, Gross M, Esener S. Rate Equations for modeling dispersive nonlinearity in Fabry-Perot semiconductor optical amplifiers. Opt Express. 2003 Oct 20; 11(21):2689-96. PMID: 19471383.
      View in: PubMed
    72. Wen P, Sanchez M, Gross M, Esener S. Observation of bistability in a Vertical-Cavity Semiconductor Optical Amplifier (VCSOA). Opt Express. 2002 Nov 04; 10(22):1273-8. PMID: 19451988.
      View in: PubMed
    73. Ozkan NS, Hendrick WL, Marchand PJ, Esener S. Misalignment tolerance analysis of free-space optical interconnects via statistical methods. Appl Opt. 2002 May 10; 41(14):2686-94. PMID: 12022668.
      View in: PubMed
    74. Li G, Huang D, Yuceturk E, Marchand PJ, Esener S, Ozguz VH, Liu Y. Three-dimensional optoelectronic stacked processor by use of free-space optical interconnection and three-dimensional VLSI chip stacks. Appl Opt. 2002 Jan 10; 41(2):348-60. PMID: 11899274.
      View in: PubMed
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