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Exploring the "misfolding problem" by systematic discovery and analysis of functional-but-degraded proteins. Mol Biol Cell. 2023 Dec 01; 34(13):ar125.
Flagg MP, Lam B, Lam DK, Le TM, Kao A, Slaiwa YI, Hampton RY. PMID: 37729018; PMCID: PMC10848938.
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PubMed Mentions:
1 Fields:
Translation:
HumansCells
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Inner-nuclear-membrane-associated degradation employs Dfm1-independent retrotranslocation and alleviates misfolded transmembrane-protein toxicity. Mol Biol Cell. 2021 04 01; 32(7):521-537.
Flagg MP, Wangeline MA, Holland SR, Duttke SH, Benner C, Neal S, Hampton RY. PMID: 33566711; PMCID: PMC8101470.
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PubMed Mentions:
3 Fields:
Translation:
AnimalsCells
-
An autonomous, but INSIG-modulated, role for the sterol sensing domain in mallostery-regulated ERAD of yeast HMG-CoA reductase. J Biol Chem. 2021 Jan-Jun; 296:100063.
Wangeline MA, Hampton RY. PMID: 33184059; PMCID: PMC7948459.
View in:
PubMed Mentions:
4 Fields:
Translation:
AnimalsCells
-
Direct involvement of Hsp70 ATP hydrolysis in Ubr1-dependent quality control. Mol Biol Cell. 2020 11 15; 31(24):2669-2686.
Singh A, Vashistha N, Heck J, Tang X, Wipf P, Brodsky JL, Hampton RY. PMID: 32966159; PMCID: PMC7927186.
View in:
PubMed Mentions:
7 Fields:
Translation:
AnimalsCells
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HRD Complex Self-Remodeling Enables a Novel Route of Membrane Protein Retrotranslocation. iScience. 2020 Aug 21; 23(9):101493.
Neal S, Syau D, Nejatfard A, Nadeau S, Hampton RY. PMID: 32891886; PMCID: PMC7481253.
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PubMed Mentions:
12
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Integrating after CEN Excision (ICE) Plasmids: Combining the ease of yeast recombination cloning with the stability of genomic integration. Yeast. 2019 10; 36(10):593-605.
Flagg MP, Kao A, Hampton RY. PMID: 31074531.
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PubMed Mentions:
6 Fields:
Translation:
Animals
-
Assays for protein retrotranslocation in ERAD. Methods Enzymol. 2019; 619:1-26.
Neal S, Duttke SH, Hampton RY. PMID: 30910017; PMCID: PMC10802991.
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PubMed Mentions:
5 Fields:
Translation:
AnimalsCells
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"Mallostery"-ligand-dependent protein misfolding enables physiological regulation by ERAD. J Biol Chem. 2018 09 21; 293(38):14937-14950.
Wangeline MA, Hampton RY. PMID: 30018140; PMCID: PMC6153289.
View in:
PubMed Mentions:
19 Fields:
Translation:
Cells
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The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins. Mol Cell. 2018 03 01; 69(5):915.
Neal S, Jaeger PA, Duttke SH, Benner C, Glass CK, Ideker T, Hampton RY. PMID: 29499140.
View in:
PubMed Mentions:
11 Fields:
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Systematic Gene-to-Phenotype Arrays: A High-Throughput Technique for Molecular Phenotyping. Mol Cell. 2018 01 18; 69(2):321-333.e3.
Jaeger PA, Ornelas L, McElfresh C, Wong LR, Hampton RY, Ideker T. PMID: 29351850; PMCID: PMC5777277.
View in:
PubMed Mentions:
5 Fields:
Translation:
Animals
-
The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins. Mol Cell. 2018 01 18; 69(2):306-320.e4.
Neal S, Jaeger PA, Duttke SH, Benner C, K Glass C, Ideker T, Hampton RY. PMID: 29351849; PMCID: PMC6049073.
View in:
PubMed Mentions:
40 Fields:
Translation:
AnimalsCells
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Proteostatic Tactics in the Strategy of Sterol Regulation. Annu Rev Cell Dev Biol. 2017 10 06; 33:467-489.
Wangeline MA, Vashistha N, Hampton RY. PMID: 28992438; PMCID: PMC6037418.
View in:
PubMed Mentions:
24 Fields:
Translation:
HumansAnimalsCells
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New developments for protein quality control. Science. 2017 08 04; 357(6350):450-451.
Hampton RY, Dargemont C. PMID: 28774913.
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PubMed Mentions:
2 Fields:
Translation:
Cells
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A Cdc48 "Retrochaperone" Function Is Required for the Solubility of Retrotranslocated, Integral Membrane Endoplasmic Reticulum-associated Degradation (ERAD-M) Substrates. J Biol Chem. 2017 02 24; 292(8):3112-3128.
Neal S, Mak R, Bennett EJ, Hampton R. PMID: 28077573; PMCID: PMC5336148.
View in:
PubMed Mentions:
22 Fields:
Translation:
AnimalsCells
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Control of the innate immune response by the mevalonate pathway. Nat Immunol. 2016 08; 17(8):922-9.
Akula MK, Shi M, Jiang Z, Foster CE, Miao D, Li AS, Zhang X, Gavin RM, Forde SD, Germain G, Carpenter S, Rosadini CV, Gritsman K, Chae JJ, Hampton R, Silverman N, Gravallese EM, Kagan JC, Fitzgerald KA, Kastner DL, Golenbock DT, Bergo MO, Wang D. PMID: 27270400; PMCID: PMC4955724.
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PubMed Mentions:
86 Fields:
Translation:
HumansAnimalsCells
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Direct and essential function for Hrd3 in ER-associated degradation. Proc Natl Acad Sci U S A. 2016 May 24; 113(21):5934-9.
Vashistha N, Neal SE, Singh A, Carroll SM, Hampton RY. PMID: 27170191; PMCID: PMC4889393.
View in:
PubMed Mentions:
37 Fields:
Translation:
AnimalsCells
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The Unfolded Protein Response Triggers Site-Specific Regulatory Ubiquitylation of 40S Ribosomal Proteins. Mol Cell. 2015 Jul 02; 59(1):35-49.
Higgins R, Gendron JM, Rising L, Mak R, Webb K, Kaiser SE, Zuzow N, Riviere P, Yang B, Fenech E, Tang X, Lindsay SA, Christianson JC, Hampton RY, Wasserman SA, Bennett EJ. PMID: 26051182; PMCID: PMC4491043.
View in:
PubMed Mentions:
86 Fields:
Translation:
HumansAnimalsCells
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Insulin-induced gene protein (INSIG)-dependent sterol regulation of Hmg2 endoplasmic reticulum-associated degradation (ERAD) in yeast. J Biol Chem. 2013 Mar 22; 288(12):8519-8530.
Theesfeld CL, Hampton RY. PMID: 23306196; PMCID: PMC3605666.
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PubMed Mentions:
14 Fields:
Translation:
AnimalsCells
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Finding the will and the way of ERAD substrate retrotranslocation. Curr Opin Cell Biol. 2012 Aug; 24(4):460-6.
Hampton RY, Sommer T. PMID: 22854296.
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PubMed Mentions:
72 Fields:
Translation:
HumansAnimalsCells
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Cytosolic entry of Shiga-like toxin a chain from the yeast endoplasmic reticulum requires catalytically active Hrd1p. PLoS One. 2012; 7(7):e41119.
Li S, Spooner RA, Hampton RY, Lord JM, Roberts LM. PMID: 22829918; PMCID: PMC3400632.
View in:
PubMed Mentions:
15 Fields:
Translation:
AnimalsCells
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The sterol-sensing domain (SSD) directly mediates signal-regulated endoplasmic reticulum-associated degradation (ERAD) of 3-hydroxy-3-methylglutaryl (HMG)-CoA reductase isozyme Hmg2. J Biol Chem. 2011 Jul 29; 286(30):26298-307.
Theesfeld CL, Pourmand D, Davis T, Garza RM, Hampton RY. PMID: 21628456; PMCID: PMC3143592.
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PubMed Mentions:
22 Fields:
Translation:
AnimalsCells
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San1-mediated quality control: substrate recognition "sans" chaperones. Mol Cell. 2011 Jan 07; 41(1):2-3.
Hampton RY. PMID: 21211716.
View in:
PubMed Mentions:
5 Fields:
-
Cytoplasmic protein quality control degradation mediated by parallel actions of the E3 ubiquitin ligases Ubr1 and San1. Proc Natl Acad Sci U S A. 2010 Jan 19; 107(3):1106-11.
Heck JW, Cheung SK, Hampton RY. PMID: 20080635; PMCID: PMC2824284.
View in:
PubMed Mentions:
157 Fields:
Translation:
AnimalsCells
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Geranylgeranyl pyrophosphate is a potent regulator of HRD-dependent 3-Hydroxy-3-methylglutaryl-CoA reductase degradation in yeast. J Biol Chem. 2009 Dec 18; 284(51):35368-80.
Garza RM, Tran PN, Hampton RY. PMID: 19776008; PMCID: PMC2790966.
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PubMed Mentions:
28 Fields:
Translation:
AnimalsCells
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Usa1p is required for optimal function and regulation of the Hrd1p endoplasmic reticulum-associated degradation ubiquitin ligase. J Biol Chem. 2010 Feb 19; 285(8):5146-56.
Carroll SM, Hampton RY. PMID: 19940128; PMCID: PMC2820741.
View in:
PubMed Mentions:
39 Fields:
Translation:
AnimalsCells
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Misfolded membrane proteins are specifically recognized by the transmembrane domain of the Hrd1p ubiquitin ligase. Mol Cell. 2009 Apr 24; 34(2):212-22.
Sato BK, Schulz D, Do PH, Hampton RY. PMID: 19394298; PMCID: PMC2710143.
View in:
PubMed Mentions:
120 Fields:
Translation:
AnimalsCells
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Protein quality control as a strategy for cellular regulation: lessons from ubiquitin-mediated regulation of the sterol pathway. Chem Rev. 2009 Apr; 109(4):1561-74.
Hampton RY, Garza RM. PMID: 19243134; PMCID: PMC8530524.
View in:
PubMed Mentions:
55 Fields:
Translation:
Cells
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In vitro analysis of Hrd1p-mediated retrotranslocation of its multispanning membrane substrate 3-hydroxy-3-methylglutaryl (HMG)-CoA reductase. J Biol Chem. 2009 May 29; 284(22):14710-22.
Garza RM, Sato BK, Hampton RY. PMID: 19324879; PMCID: PMC2685653.
View in:
PubMed Mentions:
54 Fields:
Translation:
AnimalsCells
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A cholesterol toggle switch. Cell Metab. 2008 Dec; 8(6):451-3.
Hampton RY. PMID: 19041760.
View in:
PubMed Mentions:
3 Fields:
Translation:
Cells
-
Genetic and structural analysis of Hmg2p-induced endoplasmic reticulum remodeling in Saccharomyces cerevisiae. Mol Biol Cell. 2008 Oct; 19(10):4506-20.
Federovitch CM, Jones YZ, Tong AH, Boone C, Prinz WA, Hampton RY. PMID: 18667535; PMCID: PMC2555956.
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PubMed Mentions:
14 Fields:
Translation:
Cells
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Cue1p is an activator of Ubc7p E2 activity in vitro and in vivo. J Biol Chem. 2008 May 09; 283(19):12797-810.
Bazirgan OA, Hampton RY. PMID: 18321851; PMCID: PMC2442330.
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PubMed Mentions:
38 Fields:
Translation:
Cells
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Amplitude control of protein kinase C by RINCK, a novel E3 ubiquitin ligase. J Biol Chem. 2007 Nov 16; 282(46):33776-33787.
Chen D, Gould C, Garza R, Gao T, Hampton RY, Newton AC. PMID: 17893151.
View in:
PubMed Mentions:
38 Fields:
Translation:
HumansAnimalsCells
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Determinants of RING-E2 fidelity for Hrd1p, a membrane-anchored ubiquitin ligase. J Biol Chem. 2006 Dec 22; 281(51):38989-9001.
Bazirgan OA, Garza RM, Hampton RY. PMID: 17035235.
View in:
PubMed Mentions:
8 Fields:
Translation:
Cells
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Yeast Derlin Dfm1 interacts with Cdc48 and functions in ER homeostasis. Yeast. 2006 Oct-Nov; 23(14-15):1053-64.
Sato BK, Hampton RY. PMID: 17083136.
View in:
PubMed Mentions:
42 Fields:
Translation:
HumansAnimalsCells
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INSIG: a broadly conserved transmembrane chaperone for sterol-sensing domain proteins. EMBO J. 2005 Nov 16; 24(22):3917-26.
Flury I, Garza R, Shearer A, Rosen J, Cronin S, Hampton RY. PMID: 16270032; PMCID: PMC1283954.
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PubMed Mentions:
34 Fields:
Translation:
HumansAnimalsCells
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The dynamic ER: experimental approaches and current questions. Curr Opin Cell Biol. 2005 Aug; 17(4):409-14.
Federovitch CM, Ron D, Hampton RY. PMID: 15975777.
View in:
PubMed Mentions:
43 Fields:
Translation:
AnimalsCells
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Cell biology: sterol sensor comes up for air. Nature. 2005 May 05; 435(7038):37-8.
Garza RM, Hampton RY. PMID: 15875007.
View in:
PubMed Mentions:
2 Fields:
Translation:
Animals
-
Cdc48-Ufd2-Rad23: the road less ubiquitinated? Nat Cell Biol. 2005 Mar; 7(3):207-9.
Bazirgan OA, Hampton RY. PMID: 15738968.
View in:
PubMed Mentions:
2 Fields:
Translation:
Cells
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Lipid-mediated, reversible misfolding of a sterol-sensing domain protein. EMBO J. 2005 Jan 12; 24(1):149-59.
Shearer AG, Hampton RY. PMID: 15635451; PMCID: PMC544911.
View in:
PubMed Mentions:
34 Fields:
Translation:
Cells
-
Fusion-based strategies to identify genes involved in degradation of a specific substrate. Methods Enzymol. 2005; 399:310-23.
Hampton RY. PMID: 16338365.
View in:
PubMed Mentions:
3 Fields:
Translation:
Cells
-
Membrane biogenesis and the unfolded protein response. J Cell Biol. 2004 Oct 11; 167(1):23-5.
Ron D, Hampton RY. PMID: 15479733; PMCID: PMC2172515.
View in:
PubMed Mentions:
22 Fields:
Translation:
HumansAnimalsCells
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Structural control of endoplasmic reticulum-associated degradation: effect of chemical chaperones on 3-hydroxy-3-methylglutaryl-CoA reductase. J Biol Chem. 2004 Jan 02; 279(1):188-96.
Shearer AG, Hampton RY. PMID: 14570925.
View in:
PubMed Mentions:
26 Fields:
Translation:
AnimalsCells
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IRE1: a role in UPREgulation of ER degradation. Dev Cell. 2003 Feb; 4(2):144-6.
Hampton RY. PMID: 12586055.
View in:
PubMed Mentions:
7 Fields:
Translation:
HumansAnimalsCells
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ER-associated degradation in protein quality control and cellular regulation. Curr Opin Cell Biol. 2002 Aug; 14(4):476-82.
Hampton RY. PMID: 12383799.
View in:
PubMed Mentions:
169 Fields:
Translation:
HumansAnimalsCells
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Cod1p/Spf1p is a P-type ATPase involved in ER function and Ca2+ homeostasis. J Cell Biol. 2002 Jun 10; 157(6):1017-28.
Cronin SR, Rao R, Hampton RY. PMID: 12058017; PMCID: PMC2174042.
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PubMed Mentions:
77 Fields:
Translation:
AnimalsCells
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Cdc48-Ufd1-Npl4: stuck in the middle with Ub. Curr Biol. 2002 May 14; 12(10):R366-71.
Bays NW, Hampton RY. PMID: 12015140.
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PubMed Mentions:
64 Fields:
Translation:
Cells
-
Proteolysis and sterol regulation. Annu Rev Cell Dev Biol. 2002; 18:345-78.
Hampton RY. PMID: 12142284.
View in:
PubMed Mentions:
28 Fields:
Translation:
HumansAnimalsCells
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HRD4/NPL4 is required for the proteasomal processing of ubiquitinated ER proteins. Mol Biol Cell. 2001 Dec; 12(12):4114-28.
Bays NW, Wilhovsky SK, Goradia A, Hodgkiss-Harlow K, Hampton RY. PMID: 11739805; PMCID: PMC60780.
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PubMed Mentions:
124 Fields:
Translation:
AnimalsCells
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In vivo action of the HRD ubiquitin ligase complex: mechanisms of endoplasmic reticulum quality control and sterol regulation. Mol Cell Biol. 2001 Jul; 21(13):4276-91.
Gardner RG, Shearer AG, Hampton RY. PMID: 11390656; PMCID: PMC87088.
View in:
PubMed Mentions:
45 Fields:
Translation:
AnimalsCells
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Hrd1p/Der3p is a membrane-anchored ubiquitin ligase required for ER-associated degradation. Nat Cell Biol. 2001 Jan; 3(1):24-9.
Bays NW, Gardner RG, Seelig LP, Joazeiro CA, Hampton RY. PMID: 11146622.
View in:
PubMed Mentions:
206 Fields:
Translation:
AnimalsCells
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An oxysterol-derived positive signal for 3-hydroxy- 3-methylglutaryl-CoA reductase degradation in yeast. J Biol Chem. 2001 Mar 23; 276(12):8681-94.
Gardner RG, Shan H, Matsuda SP, Hampton RY. PMID: 11134013.
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PubMed Mentions:
16 Fields:
Translation:
AnimalsCells
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Endoplasmic reticulum degradation requires lumen to cytosol signaling. Transmembrane control of Hrd1p by Hrd3p. J Cell Biol. 2000 Oct 02; 151(1):69-82.
Gardner RG, Swarbrick GM, Bays NW, Cronin SR, Wilhovsky S, Seelig L, Kim C, Hampton RY. PMID: 11018054; PMCID: PMC2189800.
View in:
PubMed Mentions:
151 Fields:
Translation:
Cells
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ER stress response: getting the UPR hand on misfolded proteins. Curr Biol. 2000 Jul 13; 10(14):R518-21.
Hampton RY. PMID: 10898996.
View in:
PubMed Mentions:
80 Fields:
Translation:
AnimalsCells
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HRD gene dependence of endoplasmic reticulum-associated degradation. Mol Biol Cell. 2000 May; 11(5):1697-708.
Wilhovsky S, Gardner R, Hampton R. PMID: 10793145; PMCID: PMC14877.
View in:
PubMed Mentions:
43 Fields:
Translation:
AnimalsCells
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Cholesterol homeostasis: ESCAPe from the ER. Curr Biol. 2000 Apr 20; 10(8):R298-301.
Hampton RY. PMID: 10801406.
View in:
PubMed Mentions:
4 Fields:
Translation:
HumansAnimalsCells
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Regulation of HMG-CoA reductase degradation requires the P-type ATPase Cod1p/Spf1p. J Cell Biol. 2000 Mar 06; 148(5):915-24.
Cronin SR, Khoury A, Ferry DK, Hampton RY. PMID: 10704442; PMCID: PMC2174543.
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PubMed Mentions:
49 Fields:
Translation:
AnimalsCells
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A 'distributed degron' allows regulated entry into the ER degradation pathway. EMBO J. 1999 Nov 01; 18(21):5994-6004.
Gardner RG, Hampton RY. PMID: 10545111; PMCID: PMC1171665.
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PubMed Mentions:
38 Fields:
Translation:
AnimalsCells
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A highly conserved signal controls degradation of 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase in eukaryotes. J Biol Chem. 1999 Oct 29; 274(44):31671-8.
Gardner RG, Hampton RY. PMID: 10531376.
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PubMed Mentions:
45 Fields:
Translation:
AnimalsCells
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Measuring protein degradation with green fluorescent protein. Methods Enzymol. 1999; 302:58-73.
Cronin SR, Hampton RY. PMID: 12876763.
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PubMed Mentions:
12 Fields:
Translation:
Cells
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Sequence determinants for regulated degradation of yeast 3-hydroxy-3-methylglutaryl-CoA reductase, an integral endoplasmic reticulum membrane protein. Mol Biol Cell. 1998 Sep; 9(9):2611-26.
Gardner R, Cronin S, Leader B, Rine J, Hampton R, Leder B. PMID: 9725915; PMCID: PMC25534.
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PubMed Mentions:
36 Fields:
Translation:
AnimalsCells
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Unified nomenclature for subunits of the Saccharomyces cerevisiae proteasome regulatory particle. Trends Biochem Sci. 1998 Jul; 23(7):244-5.
Finley D, Tanaka K, Mann C, Feldmann H, Hochstrasser M, Vierstra R, Johnston S, Hampton R, Haber J, Mccusker J, Silver P, Frontali L, Thorsness P, Varshavsky A, Byers B, Madura K, Reed SI, Wolf D, Jentsch S, Sommer T, Baumeister W, Goldberg A, Fried V, Rubin DM, Toh-e A, et al. PMID: 9697412.
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PubMed Mentions:
39 Fields:
Translation:
HumansAnimalsCells
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Genetic analysis of hydroxymethylglutaryl-coenzyme A reductase regulated degradation. Curr Opin Lipidol. 1998 Apr; 9(2):93-7.
Hampton RY. PMID: 9559264.
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PubMed Mentions:
4 Fields:
Translation:
AnimalsCells
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Ubiquitin-mediated regulation of 3-hydroxy-3-methylglutaryl-CoA reductase. Proc Natl Acad Sci U S A. 1997 Nov 25; 94(24):12944-8.
Hampton RY, Bhakta H. PMID: 9371780; PMCID: PMC24243.
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PubMed Mentions:
45 Fields:
Translation:
AnimalsCells
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Effects of overproduction of the catalytic domain of 3-hydroxy-3-methylglutaryl coenzyme A reductase on squalene synthesis in Saccharomyces cerevisiae. Appl Environ Microbiol. 1997 Sep; 63(9):3341-4.
Donald KA, Hampton RY, Fritz IB. PMID: 9292983; PMCID: PMC168639.
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PubMed Mentions:
65 Fields:
Translation:
AnimalsCells
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Role of 26S proteasome and HRD genes in the degradation of 3-hydroxy-3-methylglutaryl-CoA reductase, an integral endoplasmic reticulum membrane protein. Mol Biol Cell. 1996 Dec; 7(12):2029-44.
Hampton RY, Gardner RG, Rine J. PMID: 8970163; PMCID: PMC276048.
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PubMed Mentions:
230 Fields:
Translation:
Cells
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The biology of HMG-CoA reductase: the pros of contra-regulation. Trends Biochem Sci. 1996 Apr; 21(4):140-5.
Hampton R, Dimster-Denk D, Rine J. PMID: 8701471.
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PubMed Mentions:
30 Fields:
Translation:
Animals
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In vivo examination of membrane protein localization and degradation with green fluorescent protein. Proc Natl Acad Sci U S A. 1996 Jan 23; 93(2):828-33.
Hampton RY, Koning A, Wright R, Rine J. PMID: 8570643; PMCID: PMC40142.
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PubMed Mentions:
42 Fields:
Translation:
AnimalsCells
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Regulated degradation of HMG-CoA reductase, an integral membrane protein of the endoplasmic reticulum, in yeast. J Cell Biol. 1994 Apr; 125(2):299-312.
Hampton RY, Rine J. PMID: 8163547; PMCID: PMC2120026.
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PubMed Mentions:
90 Fields:
Translation:
AnimalsCells
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Lipid A 4'-kinase from Escherichia coli: enzyme assay and preparation of 4'-32P-labeled probes of high specific radioactivity. Methods Enzymol. 1992; 209:466-75.
Hampton RY, Raetz CR. PMID: 1323052.
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PubMed Mentions:
4 Fields:
Translation:
Cells
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Recognition and plasma clearance of endotoxin by scavenger receptors. Nature. 1991 Jul 25; 352(6333):342-4.
Hampton RY, Golenbock DT, Penman M, Krieger M, Raetz CR. PMID: 1852209.
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PubMed Mentions:
123 Fields:
Translation:
AnimalsCells
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Effects of changes in osmolality on the stability and function of cultured chromaffin cells and the possible role of osmotic forces in exocytosis. J Cell Biol. 1983 Apr; 96(4):1082-8.
Hampton RY, Holz RW. PMID: 6833392; PMCID: PMC2112313.
View in:
PubMed Mentions:
19 Fields:
Translation:
AnimalsCells