Kivilcim Ozturk

Title(s)Postdoctoral Scholar, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Interface-guided phenotyping of coding variants in the transcription factor RUNX1 with SEUSS. bioRxiv. 2023 Aug 04. Ozturk K, Panwala R, Sheen J, Ford K, Payne N, Zhang DE, Hutter S, Haferlach T, Ideker T, Mali P, Carter H. PMID: 37577681; PMCID: PMC10418284.
      View in: PubMed   Mentions:
    2. Publisher Correction: Predicting functional consequences of mutations using molecular interaction network features. Hum Genet. 2022 Oct; 141(10):1593. Ozturk K, Carter H. PMID: 36151408; PMCID: PMC9522748.
      View in: PubMed   Mentions:    Fields:    
    3. Predicting functional consequences of mutations using molecular interaction network features. Hum Genet. 2022 Jun; 141(6):1195-1210. Ozturk K, Carter H. PMID: 34432150; PMCID: PMC8873243.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    4. A phenotypically supervised single-cell analysis protocol to study within-cell-type heterogeneity of cultured mammalian cells. STAR Protoc. 2021 06 18; 2(2):100561. Chen K, Ozturk K, Liefeld T, Reich M, Mesirov JP, Carter H, Fraley SI. PMID: 34095869; PMCID: PMC8165572.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    5. In silico analysis suggests less effective MHC-II presentation of SARS-CoV-2 RBM peptides: Implication for neutralizing antibody responses. PLoS One. 2021; 16(2):e0246731. Castro A, Ozturk K, Zanetti M, Carter H. PMID: 33571241; PMCID: PMC7877779.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    6. MHC-II constrains the natural neutralizing antibody response to the SARS-CoV-2 spike RBM in humans. bioRxiv. 2020 Dec 28. Castro A, Ozturk K, Zanetti M, Carter H. PMID: 33398284; PMCID: PMC7781323.
      View in: PubMed   Mentions:
    7. Phenotypically supervised single-cell sequencing parses within-cell-type heterogeneity. iScience. 2021 Jan 22; 24(1):101991. Chen K, Ozturk K, Contreras RL, Simon J, McCann S, Chen WJ, Carter H, Fraley SI. PMID: 33490901; PMCID: PMC7808958.
      View in: PubMed   Mentions: 7  
    8. Aggregation of chitosan nanoparticles in cell culture: Reasons and resolutions. Int J Pharm. 2020 Mar 30; 578:119119. Ozturk K, Arslan FB, Tavukcuoglu E, Esendagli G, Calis S. PMID: 32035256.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    9. Strategies for Network GWAS Evaluated Using Classroom Crowd Science. Cell Syst. 2019 Oct 23; 9(4):414. Fong SH, Carlin DE, Ozturk K, 2018 UCSD Network Biology Class, Ideker T. PMID: 31647918.
      View in: PubMed   Mentions:    Fields:    
    10. Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5. Hum Mutat. 2019 09; 40(9):1474-1485. Monzon AM, Carraro M, Chiricosta L, Reggiani F, Han J, Ozturk K, Wang Y, Miller M, Bromberg Y, Capriotti E, Savojardo C, Babbi G, Martelli PL, Casadio R, Katsonis P, Lichtarge O, Carter H, Kousi M, Katsanis N, Andreoletti G, Moult J, Brenner SE, Ferrari C, Leonardi E, Tosatto SCE. PMID: 31260570; PMCID: PMC7354699.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    11. Elevated neoantigen levels in tumors with somatic mutations in the HLA-A, HLA-B, HLA-C and B2M genes. BMC Med Genomics. 2019 07 25; 12(Suppl 6):107. Castro A, Ozturk K, Pyke RM, Xian S, Zanetti M, Carter H. PMID: 31345234; PMCID: PMC6657029.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCells
    12. Strategies for Network GWAS Evaluated Using Classroom Crowd Science. Cell Syst. 2019 04 24; 8(4):275-280. Fong SH, Carlin DE, Ozturk K, 2018 UCSD Network Biology Class, Ideker T. PMID: 31022372; PMCID: PMC6764759.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    13. Identifying Driver Interfaces Enriched for Somatic Missense Mutations in Tumors. Methods Mol Biol. 2019; 1907:51-72. Ozturk K, Carter H. PMID: 30542990.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    14. Integrating molecular networks with genetic variant interpretation for precision medicine. Wiley Interdiscip Rev Syst Biol Med. 2019 05; 11(3):e1443. Capriotti E, Ozturk K, Carter H. PMID: 30548534; PMCID: PMC6450710.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    15. The Emerging Potential for Network Analysis to Inform Precision Cancer Medicine. J Mol Biol. 2018 09 14; 430(18 Pt A):2875-2899. Ozturk K, Dow M, Carlin DE, Bejar R, Carter H. PMID: 29908887; PMCID: PMC6097914.
      View in: PubMed   Mentions: 33     Fields:    Translation:Humans
    16. Tumor-Induced Myeloid Cells Are Reduced by Gemcitabine-Loaded PAMAM Dendrimers Decorated with Anti-Flt1 Antibody. Mol Pharm. 2018 04 02; 15(4):1526-1533. Yoyen-Ermis D, Ozturk K, Kursunel MA, Aydin C, Ozkazanc D, Gurbuz MU, Uner A, Tulu M, Calis S, Esendagli G. PMID: 29481086.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
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