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    Suresh Subramani

    Address9500 Gilman Drive #0322
    CA La Jolla 92093
    Phone858-534-2327
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      Collapse Research 
      Collapse Research Activities and Funding
      Mechanisms involved in Pexophagy
      NIH/NIGMS R01GM069373Aug 1, 2006 - Jul 31, 2014
      Role: Principal Investigator
      Shuttling of Peroxisomal Targeting Sequence Receptors
      NIH/NIDDK R01DK059844Aug 1, 2002 - Jul 31, 2007
      Role: Principal Investigator
      Comprehensive Biology: Exploiting the Yeast Genome
      NIH P41RR011823Sep 30, 1996 - Jun 30, 2016
      Role: Co-Investigator
      Targeting of Proteins into Peroxisomes
      NIH/NIDDK R01DK041737May 10, 1990 - Aug 31, 2018
      Role: Principal Investigator
      Targeting of Proteins into Peroxisomes
      NIH/NIDDK R56DK041737May 10, 1990 - Apr 30, 2015
      Role: Principal Investigator
      Targeting of proteins into peroxisomes
      NIH/NIDDK R37DK041737May 10, 1990 - Apr 30, 2014
      Role: Principal Investigator
      MECHANISMS OF GENE REGULATION AND TRANSFORMATION
      NIH/NCI R01CA044997Apr 1, 1987 - Mar 31, 1990
      Role: Principal Investigator
      MECHANISM FOR GENETIC RECOMBINATION IN MAMMALIAN CELLS
      NIH/NCI K04CA001062Jul 1, 1985 - Jun 30, 1990
      Role: Principal Investigator
      MECHANISM FOR DNA RECOMBINATION AND REPAIR
      NIH/NIGMS R01GM031253Jul 1, 1982 - Jun 30, 1996
      Role: Principal Investigator

      Collapse Bibliographic 
      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Wang W, Xia ZJ, Farré JC, Subramani S. TRIM37, a novel E3 ligase for PEX5-mediated peroxisomal matrix protein import. J Cell Biol. 2017 Sep 04; 216(9):2843-2858. PMID: 28724525.
        View in: PubMed
      2. Agrawal G, Shang HH, Xia ZJ, Subramani S. Functional regions of the peroxin Pex19 necessary for peroxisome biogenesis. J Biol Chem. 2017 Jul 07; 292(27):11547-11560. PMID: 28526747.
        View in: PubMed
      3. Farré JC, Kramer M, Ideker T, Subramani S. Active Interaction Mapping as a tool to elucidate hierarchical functions of biological processes. Autophagy. 2017 Jul 03; 13(7):1248-1249. PMID: 28486053.
        View in: PubMed
      4. Kramer MH, Farré JC, Mitra K, Yu MK, Ono K, Demchak B, Licon K, Flagg M, Balakrishnan R, Cherry JM, Subramani S, Ideker T. Active Interaction Mapping Reveals the Hierarchical Organization of Autophagy. Mol Cell. 2017 Jan 23. PMID: 28132844.
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      5. Wang W, Subramani S. Assays to Monitor Pexophagy in Yeast. Methods Enzymol. 2017; 588:413-427. PMID: 28237113.
        View in: PubMed
      6. Subramani S, Shetty AP, Kanna RM, Shanmuganathan R. Ossified ligamentum flavum causing neurological deficit above the level of post-tuberculous kyphotic deformity. J Clin Orthop Trauma. 2017 Apr-Jun; 8(2):174-177. PMID: 28720997.
        View in: PubMed
      7. Zientara-Rytter K, Subramani S. Role of actin in shaping autophagosomes. Autophagy. 2016 Oct 10; 0. PMID: 27723370.
        View in: PubMed
      8. Wang Q, S Abdul S, Almeida L, Ananiadou S, Balderas-Martínez YI, Batista-Navarro R, Campos D, Chilton L, Chou HJ, Contreras G, Cooper L, Dai HJ, Ferrell B, Fluck J, Gama-Castro S, George N, Gkoutos G, Irin AK, Jensen LJ, Jimenez S, Jue TR, Keseler I, Madan S, Matos S, McQuilton P, Milacic M, Mort M, Natarajan J, Pafilis E, Pereira E, Rao S, Rinaldi F, Rothfels K, Salgado D, Silva RM, Singh O, Stefancsik R, Su CH, Subramani S, Tadepally HD, Tsaprouni L, Vasilevsky N, Wang X, Chatr-Aryamontri A, Laulederkind SJ, Matis-Mitchell S, McEntyre J, Orchard S, Pundir S, Rodriguez-Esteban R, Van Auken K, Lu Z, Schaeffer M, Wu CH, Hirschman L, Arighi CN. Overview of the interactive task in BioCreative V. Database (Oxford). 2016; 2016. PMID: 27589961; PMCID: PMC5009325.
      9. Farré JC, Subramani S. Mechanistic insights into selective autophagy pathways: lessons from yeast. Nat Rev Mol Cell Biol. 2016 Sep; 17(9):537-52. PMID: 27381245.
        View in: PubMed
      10. Zientara-Rytter K, Subramani S. Autophagic degradation of peroxisomes in mammals. Biochem Soc Trans. 2016 04 15; 44(2):431-40. PMID: 27068951; NIHMSID: NIHMS803703.
        View in: PubMed
      11. Agrawal G, Fassas SN, Xia ZJ, Subramani S. Distinct requirements for intra-ER sorting and budding of peroxisomal membrane proteins from the ER. J Cell Biol. 2016 Feb 1; 212(3):335-48. PMID: 26833788.
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      12. Subramani S. A mammalian pexophagy target. Nat Cell Biol. 2015 Nov; 17(11):1371-3. PMID: 26458245.
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      13. Agrawal G, Subramani S. De novo peroxisome biogenesis: Evolving concepts and conundrums. Biochim Biophys Acta. 2016 May; 1863(5):892-901. PMID: 26381541.
        View in: PubMed
      14. Till A, Saito R, Merkurjev D, Liu JJ, Syed GH, Kolnik M, Siddiqui A, Glas M, Scheffler B, Ideker T, Subramani S. Evolutionary trends and functional anatomy of the human expanded autophagy network. Autophagy. 2015 Sep 2; 11(9):1652-67. PMID: 26103419.
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      15. Burnett SF, Farré JC, Nazarko TY, Subramani S. Peroxisomal Pex3 Activates Selective Autophagy of Peroxisomes via Interaction with the Pexophagy Receptor Atg30. J Biol Chem. 2015 Mar 27; 290(13):8623-31. PMID: 25694426.
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      16. Subramani S, Kalpana R, Monickaraj PM, Natarajan J. HPIminer: A text mining system for building and visualizing human protein interaction networks and pathways. J Biomed Inform. 2015 Apr; 54:121-31. PMID: 25659452.
        View in: PubMed
      17. Cutting AS, Del Rosario Y, Mu R, Rodriguez A, Till A, Subramani S, Gottlieb RA, Doran KS. The Role of Autophagy during Group B Streptococcus Infection of Blood-Brain Barrier Endothelium. J Biol Chem. 2014 Dec 26; 289(52):35711-23. PMID: 25371213.
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      18. Sampath Kumar V, Marimuthu K, Subramani S, Sharma V, Bera J, Kotwal P. Prospective randomized trial comparing open reduction and internal fixation with minimally invasive reduction and percutaneous fixation in managing displaced intra-articular calcaneal fractures. Int Orthop. 2014 Dec; 38(12):2505-12. PMID: 25139716.
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      19. Hagstrom D, Ma C, Guha-Polley S, Subramani S. The unique degradation pathway of the PTS2 receptor, Pex7, is dependent on the PTS receptor/coreceptor, Pex5 and Pex20. Mol Biol Cell. 2014 Sep 1; 25(17):2634-43. PMID: 25009284; PMCID: PMC4148252.
      20. Kumar VS, Subramani S, Veerapan S, Khan SA. Evaluation of online health information on clubfoot using the DISCERN tool. J Pediatr Orthop B. 2014 Mar; 23(2):135-8. PMID: 24048196.
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      21. Lakhani R, Vogel KR, Till A, Liu J, Burnett SF, Gibson KM, Subramani S. Defects in GABA metabolism affect selective autophagy pathways and are alleviated by mTOR inhibition. EMBO Mol Med. 2014 Apr; 6(4):551-66. PMID: 24578415; PMCID: PMC3992080.
      22. Nazarko TY, Ozeki K, Till A, Ramakrishnan G, Lotfi P, Yan M, Subramani S. Peroxisomal Atg37 binds Atg30 or palmitoyl-CoA to regulate phagophore formation during pexophagy. J Cell Biol. 2014 Feb 17; 204(4):541-57. PMID: 24535825.
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      23. Raja K, Subramani S, Natarajan J. A hybrid named entity tagger for tagging human proteins/genes. Int J Data Min Bioinform. 2014; 10(3):315-28. PMID: 25946866.
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      24. Kim SJ, Khan M, Quan J, Till A, Subramani S, Siddiqui A. Hepatitis B virus disrupts mitochondrial dynamics: induces fission and mitophagy to attenuate apoptosis. PLoS Pathog. 2013 Dec; 9(12):e1003722. PMID: 24339771.
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      25. Subramani S, Raja K, Natarajan J. ProNormz--an integrated approach for human proteins and protein kinases normalization. J Biomed Inform. 2014 Feb; 47:131-8. PMID: 24144801.
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      26. Agrawal G, Subramani S. Emerging role of the endoplasmic reticulum in peroxisome biogenesis. Front Physiol. 2013; 4:286. PMID: 24115935; PMCID: PMC3792350.
      27. Ma C, Hagstrom D, Polley SG, Subramani S. Redox-regulated cargo binding and release by the peroxisomal targeting signal receptor, Pex5. J Biol Chem. 2013 Sep 20; 288(38):27220-31. PMID: 23902771; PMCID: PMC3779719.
      28. Till A, Lipinski S, Ellinghaus D, Mayr G, Subramani S, Rosenstiel P, Franke A. Autophagy receptor CALCOCO2/NDP52 takes center stage in Crohn disease. Autophagy. 2013 Aug; 9(8):1256-7. PMID: 23820297; PMCID: PMC3748200.
      29. Ellinghaus D, Zhang H, Zeissig S, Lipinski S, Till A, Jiang T, Stade B, Bromberg Y, Ellinghaus E, Keller A, Rivas MA, Skieceviciene J, Doncheva NT, Liu X, Liu Q, Jiang F, Forster M, Mayr G, Albrecht M, Häsler R, Boehm BO, Goodall J, Berzuini CR, Lee J, Andersen V, Vogel U, Kupcinskas L, Kayser M, Krawczak M, Nikolaus S, Weersma RK, Ponsioen CY, Sans M, Wijmenga C, Strachan DP, McArdle WL, Vermeire S, Rutgeerts P, Sanderson JD, Mathew CG, Vatn MH, Wang J, Nöthen MM, Duerr RH, Büning C, Brand S, Glas J, Winkelmann J, Illig T, Latiano A, Annese V, Halfvarson J, D'Amato M, Daly MJ, Nothnagel M, Karlsen TH, Subramani S, Rosenstiel P, Schreiber S, Parkes M, Franke A. Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies. Gastroenterology. 2013 Aug; 145(2):339-47. PMID: 23624108; NIHMSID: NIHMS500460.
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      30. Farré JC, Burkenroad A, Burnett SF, Subramani S. Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11. EMBO Rep. 2013 May; 14(5):441-9. PMID: 23559066; PMCID: PMC3642380.
      31. Liu X, Subramani S. Unique requirements for mono- and polyubiquitination of the peroxisomal targeting signal co-receptor, Pex20. J Biol Chem. 2013 Mar 8; 288(10):7230-40. PMID: 23344950; PMCID: PMC3591631.
      32. Subramani S, Malhotra V. Non-autophagic roles of autophagy-related proteins. EMBO Rep. 2013 Feb; 14(2):143-51. PMID: 23337627; PMCID: PMC3566844.
      33. Arighi CN, Carterette B, Cohen KB, Krallinger M, Wilbur WJ, Fey P, Dodson R, Cooper L, Van Slyke CE, Dahdul W, Mabee P, Li D, Harris B, Gillespie M, Jimenez S, Roberts P, Matthews L, Becker K, Drabkin H, Bello S, Licata L, Chatr-aryamontri A, Schaeffer ML, Park J, Haendel M, Van Auken K, Li Y, Chan J, Muller HM, Cui H, Balhoff JP, Chi-Yang Wu J, Lu Z, Wei CH, Tudor CO, Raja K, Subramani S, Natarajan J, Cejuela JM, Dubey P, Wu C. An overview of the BioCreative 2012 Workshop Track III: interactive text mining task. Database (Oxford). 2013; 2013:bas056. PMID: 23327936; PMCID: PMC3625048.
      34. Raja K, Subramani S, Natarajan J. PPInterFinder--a mining tool for extracting causal relations on human proteins from literature. Database (Oxford). 2013; 2013:bas052. PMID: 23325628; PMCID: PMC3548331.
      35. Liu X, Ma C, Subramani S. Recent advances in peroxisomal matrix protein import. Curr Opin Cell Biol. 2012 Aug; 24(4):484-9. PMID: 22683191; NIHMSID: NIHMS381389.
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      36. Till A, Lakhani R, Burnett SF, Subramani S. Pexophagy: the selective degradation of peroxisomes. Int J Cell Biol. 2012; 2012:512721. PMID: 22536249; PMCID: PMC3320016.
      37. Joshi S, Agrawal G, Subramani S. Phosphorylation-dependent Pex11p and Fis1p interaction regulates peroxisome division. Mol Biol Cell. 2012 Apr; 23(7):1307-15. PMID: 22337771; PMCID: PMC3315806.
      38. Agrawal G, Joshi S, Subramani S. Cell-free sorting of peroxisomal membrane proteins from the endoplasmic reticulum. Proc Natl Acad Sci U S A. 2011 May 31; 108(22):9113-8. PMID: 21576455; PMCID: PMC3107335.
      39. Ma C, Agrawal G, Subramani S. Peroxisome assembly: matrix and membrane protein biogenesis. J Cell Biol. 2011 Apr 4; 193(1):7-16. PMID: 21464226; PMCID: PMC3082194.
      40. Nazarko VY, Nazarko TY, Farré JC, Stasyk OV, Warnecke D, Ulaszewski S, Cregg JM, Sibirny AA, Subramani S. Atg35, a micropexophagy-specific protein that regulates micropexophagic apparatus formation in Pichia pastoris. Autophagy. 2011 Apr; 7(4):375-85. PMID: 21169734.
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      41. Farré JC, Subramani S. Rallying the exocyst as an autophagy scaffold. Cell. 2011 Jan 21; 144(2):172-4. PMID: 21241888; NIHMSID: NIHMS265189.
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      42. Manjithaya R, Subramani S. Autophagy: a broad role in unconventional protein secretion? Trends Cell Biol. 2011 Feb; 21(2):67-73. PMID: 20961762; NIHMSID: NIHMS243543.
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      43. Manjithaya R, Subramani S. Role of autophagy in unconventional protein secretion. Autophagy. 2010 Jul; 6(5):650-1. PMID: 20473033; PMCID: PMC3677939.
      44. Till A, Subramani S. A balancing act for autophagin. J Clin Invest. 2010 Jul; 120(7):2273-6. PMID: 20577044; PMCID: PMC2898612.
      45. Manjithaya R, Jain S, Farré JC, Subramani S. A yeast MAPK cascade regulates pexophagy but not other autophagy pathways. J Cell Biol. 2010 Apr 19; 189(2):303-10. PMID: 20385774; PMCID: PMC2856896.
      46. Manjithaya R, Anjard C, Loomis WF, Subramani S. Unconventional secretion of Pichia pastoris Acb1 is dependent on GRASP protein, peroxisomal functions, and autophagosome formation. J Cell Biol. 2010 Feb 22; 188(4):537-46. PMID: 20156962.
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      47. Manjithaya R, Nazarko TY, Farré JC, Subramani S. Molecular mechanism and physiological role of pexophagy. FEBS Lett. 2010 Apr 2; 584(7):1367-73. PMID: 20083110.
        View in: PubMed
      48. Farré JC, Mathewson RD, Manjithaya R, Subramani S. Roles of Pichia pastoris Uvrag in vacuolar protein sorting and the phosphatidylinositol 3-kinase complex in phagophore elongation in autophagy pathways. Autophagy. 2010 Jan; 6(1):86-99. PMID: 19946209.
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      49. Nazarko TY, Farré JC, Subramani S. Peroxisome size provides insights into the function of autophagy-related proteins. Mol Biol Cell. 2009 Sep; 20(17):3828-39. PMID: 19605559.
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      50. Ma C, Subramani S. Peroxisome matrix and membrane protein biogenesis. IUBMB Life. 2009 Jul; 61(7):713-22. PMID: 19455563; NIHMSID: NIHMS100453.
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      51. Ma C, Schumann U, Rayapuram N, Subramani S. The peroxisomal matrix import of Pex8p requires only PTS receptors and Pex14p. Mol Biol Cell. 2009 Aug; 20(16):3680-9. PMID: 19570913; PMCID: PMC2777928.
      52. Farré JC, Krick R, Subramani S, Thumm M. Turnover of organelles by autophagy in yeast. Curr Opin Cell Biol. 2009 Aug; 21(4):522-30. PMID: 19515549; NIHMSID: NIHMS117062.
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      53. Schumann U, Subramani S. Special delivery from mitochondria to peroxisomes. Trends Cell Biol. 2008 Jun; 18(6):253-6. PMID: 18468897; NIHMSID: NIHMS480531.
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      54. Farré JC, Manjithaya R, Mathewson RD, Subramani S. PpAtg30 tags peroxisomes for turnover by selective autophagy. Dev Cell. 2008 Mar; 14(3):365-76. PMID: 18331717.
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      55. Baker ME, Subramani S. Activity versus peroxisomal targeting of PerCR. Structure. 2008 Mar; 16(3):331-2. PMID: 18334204.
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      56. Yan M, Rachubinski DA, Joshi S, Rachubinski RA, Subramani S. Dysferlin domain-containing proteins, Pex30p and Pex31p, localized to two compartments, control the number and size of oleate-induced peroxisomes in Pichia pastoris. Mol Biol Cell. 2008 Mar; 19(3):885-98. PMID: 18094040; PMCID: PMC2262989.
      57. Subramani S, Farré JC. A ubiquitin-like protein involved in membrane fusion. Cell. 2007 Jul 13; 130(1):18-20. PMID: 17632052.
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      58. Farré JC, Vidal J, Subramani S. A cytoplasm to vacuole targeting pathway in P. pastoris. Autophagy. 2007 May-Jun; 3(3):230-4. PMID: 17329961.
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      59. Nazarko TY, Farré JC, Polupanov AS, Sibirny AA, Subramani S. Autophagy-related pathways and specific role of sterol glucoside in yeasts. Autophagy. 2007 May-Jun; 3(3):263-5. PMID: 17329963.
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      60. Léon S, Subramani S. A conserved cysteine residue of Pichia pastoris Pex20p is essential for its recycling from the peroxisome to the cytosol. J Biol Chem. 2007 Mar 9; 282(10):7424-30. PMID: 17209040; NIHMSID: NIHMS103200.
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      61. Leon S, Suriapranata I, Yan M, Rayapuram N, Patel A, Subramani S. Characterization of protein-protein interactions: application to the understanding of peroxisome biogenesis. Methods Mol Biol. 2007; 389:219-38. PMID: 17951646.
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      62. Farre JC, Shirahama-Noda K, Zhang L, Booher K, Subramani S. Localization of proteins and organelles using fluorescence microscopy. Methods Mol Biol. 2007; 389:239-50. PMID: 17951647.
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      63. Nazarko TY, Polupanov AS, Manjithaya RR, Subramani S, Sibirny AA. The requirement of sterol glucoside for pexophagy in yeast is dependent on the species and nature of peroxisome inducers. Mol Biol Cell. 2007 Jan; 18(1):106-18. PMID: 17079731.
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      64. Léon S, Goodman JM, Subramani S. Uniqueness of the mechanism of protein import into the peroxisome matrix: transport of folded, co-factor-bound and oligomeric proteins by shuttling receptors. Biochim Biophys Acta. 2006 Dec; 1763(12):1552-64. PMID: 17011644.
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      65. Rayapuram N, Subramani S. The importomer--a peroxisomal membrane complex involved in protein translocation into the peroxisome matrix. Biochim Biophys Acta. 2006 Dec; 1763(12):1613-9. PMID: 17027097.
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      66. Lin-Cereghino GP, Godfrey L, de la Cruz BJ, Johnson S, Khuongsathiene S, Tolstorukov I, Yan M, Lin-Cereghino J, Veenhuis M, Subramani S, Cregg JM. Mxr1p, a key regulator of the methanol utilization pathway and peroxisomal genes in Pichia pastoris. Mol Cell Biol. 2006 Feb; 26(3):883-97. PMID: 16428444; PMCID: PMC1347016.
      67. Stasyk OV, Stasyk OG, Mathewson RD, Farré JC, Nazarko VY, Krasovska OS, Subramani S, Cregg JM, Sibirny AA. Atg28, a novel coiled-coil protein involved in autophagic degradation of peroxisomes in the methylotrophic yeast Pichia pastoris. Autophagy. 2006 Jan-Mar; 2(1):30-8. PMID: 16874081.
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      68. Léon S, Zhang L, McDonald WH, Yates J, Cregg JM, Subramani S. Dynamics of the peroxisomal import cycle of PpPex20p: ubiquitin-dependent localization and regulation. J Cell Biol. 2006 Jan 2; 172(1):67-78. PMID: 16390998; PMCID: PMC2063535.
      69. Zhang L, Léon S, Subramani S. Two independent pathways traffic the intraperoxisomal peroxin PpPex8p into peroxisomes: mechanism and evolutionary implications. Mol Biol Cell. 2006 Feb; 17(2):690-9. PMID: 16319171; PMCID: PMC1356580.
      70. Subramani S, Balakrishnan S, Jyoti T, Mohammed AA, Arasan S, Vijayanand C. Force-frequency relation in frog-ventricle is dependent on the direction of sodium/calcium exchange in diastole. Acta Physiol Scand. 2005 Nov; 185(3):193-202. PMID: 16218924.
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      71. Yan M, Rayapuram N, Subramani S. The control of peroxisome number and size during division and proliferation. Curr Opin Cell Biol. 2005 Aug; 17(4):376-83. PMID: 15978793.
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      72. Farré JC, Subramani S. Peroxisome turnover by micropexophagy: an autophagy-related process. Trends Cell Biol. 2004 Sep; 14(9):515-23. PMID: 15350980.
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      73. Klionsky DJ, Cregg JM, Dunn WA, Emr SD, Sakai Y, Sandoval IV, Sibirny A, Subramani S, Thumm M, Veenhuis M, Ohsumi Y. A unified nomenclature for yeast autophagy-related genes. Dev Cell. 2003 Oct; 5(4):539-45. PMID: 14536056.
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      74. Hazra PP, Suriapranata I, Snyder WB, Subramani S. Peroxisome remnants in pex3delta cells and the requirement of Pex3p for interactions between the peroxisomal docking and translocation subcomplexes. Traffic. 2002 Aug; 3(8):560-74. PMID: 12121419.
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      75. Subramani S. Hitchhiking fads en route to peroxisomes. J Cell Biol. 2002 Feb 4; 156(3):415-7. PMID: 11827979; PMCID: PMC2173331.
      76. Amery L, Mannaerts GP, Subramani S, Van Veldhoven PP, Fransen M. Identification of a novel human peroxisomal 2,4-dienoyl-CoA reductase related protein using the M13 phage protein VI phage display technology. Comb Chem High Throughput Screen. 2001 Nov; 4(7):545-52. PMID: 11669066.
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      77. Lüers GH, Otte DM, Subramani S, Franz T. Genomic organization, chromosomal localization and tissue specific expression of the murine Pxmp2 gene encoding the 22 kDa peroxisomal membrane protein (Pmp22). Gene. 2001 Jul 11; 272(1-2):45-50. PMID: 11470509.
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      78. Subramani S. Self-destruction in the line of duty. Dev Cell. 2001 Jul; 1(1):6-8. PMID: 11703917.
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      79. Johnson MA, Snyder WB, Cereghino JL, Veenhuis M, Subramani S, Cregg JM. Pichia pastoris Pex14p, a phosphorylated peroxisomal membrane protein, is part of a PTS-receptor docking complex and interacts with many peroxins. Yeast. 2001 May; 18(7):621-41. PMID: 11329173.
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      80. Dammai V, Subramani S. The human peroxisomal targeting signal receptor, Pex5p, is translocated into the peroxisomal matrix and recycled to the cytosol. Cell. 2001 Apr 20; 105(2):187-96. PMID: 11336669.
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      81. Terlecky SR, Legakis JE, Hueni SE, Subramani S. Quantitative analysis of peroxisomal protein import in vitro. Exp Cell Res. 2001 Feb 1; 263(1):98-106. PMID: 11161709.
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      82. Snyder WB, Koller A, Choy AJ, Subramani S. The peroxin Pex19p interacts with multiple, integral membrane proteins at the peroxisomal membrane. J Cell Biol. 2000 Jun 12; 149(6):1171-8. PMID: 10851015; PMCID: PMC2175117.
      83. Koller A, Valesco J, Subramani S. The CUP1 promoter of Saccharomyces cerevisiae is inducible by copper in Pichia pastoris. Yeast. 2000 May; 16(7):651-6. PMID: 10806427.
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      84. Subramani S, Koller A, Snyder WB. Import of peroxisomal matrix and membrane proteins. Annu Rev Biochem. 2000; 69:399-418. PMID: 10966464.
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      85. Sakai Y, Subramani S. Environmental response of yeast peroxisomes. Aspects of organelle assembly and degradation. Cell Biochem Biophys. 2000; 32 Spring:51-61. PMID: 11330070.
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      86. Snyder WB, Koller A, Choy AJ, Johnson MA, Cregg JM, Rangell L, Keller GA, Subramani S. Pex17p is required for import of both peroxisome membrane and lumenal proteins and interacts with Pex19p and the peroxisome targeting signal-receptor docking complex in Pichia pastoris. Mol Biol Cell. 1999 Dec; 10(12):4005-19. PMID: 10588639; PMCID: PMC25739.
      87. Yamashita H, Avraham S, Jiang S, London R, Van Veldhoven PP, Subramani S, Rogers RA, Avraham H. Characterization of human and murine PMP20 peroxisomal proteins that exhibit antioxidant activity in vitro. J Biol Chem. 1999 Oct 15; 274(42):29897-904. PMID: 10514471.
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      88. Koller A, Spong AP, Lüers GH, Subramani S. Analysis of the peroxisomal acyl-CoA oxidase gene product from Pichia pastoris and determination of its targeting signal. Yeast. 1999 Aug; 15(11):1035-44. PMID: 10455228.
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      89. Koller A, Snyder WB, Faber KN, Wenzel TJ, Rangell L, Keller GA, Subramani S. Pex22p of Pichia pastoris, essential for peroxisomal matrix protein import, anchors the ubiquitin-conjugating enzyme, Pex4p, on the peroxisomal membrane. J Cell Biol. 1999 Jul 12; 146(1):99-112. PMID: 10402463; PMCID: PMC2199742.
      90. Fransen M, Van Veldhoven PP, Subramani S. Identification of peroxisomal proteins by using M13 phage protein VI phage display: molecular evidence that mammalian peroxisomes contain a 2,4-dienoyl-CoA reductase. Biochem J. 1999 Jun 1; 340 ( Pt 2):561-8. PMID: 10333503; PMCID: PMC1220285.
      91. Snyder WB, Faber KN, Wenzel TJ, Koller A, Lüers GH, Rangell L, Keller GA, Subramani S. Pex19p interacts with Pex3p and Pex10p and is essential for peroxisome biogenesis in Pichia pastoris. Mol Biol Cell. 1999 Jun; 10(6):1745-61. PMID: 10359594; PMCID: PMC25367.
      92. Lenormand JL, Dellinger RW, Knudsen KE, Subramani S, Donoghue DJ. Speedy: a novel cell cycle regulator of the G2/M transition. EMBO J. 1999 Apr 1; 18(7):1869-77. PMID: 10202150; PMCID: PMC1171272.
      93. Fransen M, Terlecky SR, Subramani S. Identification of a human PTS1 receptor docking protein directly required for peroxisomal protein import. Proc Natl Acad Sci U S A. 1998 Jul 7; 95(14):8087-92. PMID: 9653144; PMCID: PMC20933.
      94. Lüers GH, Advani R, Wenzel T, Subramani S. The Pichia pastoris dihydroxyacetone kinase is a PTS1-containing, but cytosolic, protein that is essential for growth on methanol. Yeast. 1998 Jun 15; 14(8):759-71. PMID: 9675820.
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      95. Sakai Y, Koller A, Rangell LK, Keller GA, Subramani S. Peroxisome degradation by microautophagy in Pichia pastoris: identification of specific steps and morphological intermediates. J Cell Biol. 1998 May 4; 141(3):625-36. PMID: 9566964; PMCID: PMC2132739.
      96. Kostrub CF, Knudsen K, Subramani S, Enoch T. Hus1p, a conserved fission yeast checkpoint protein, interacts with Rad1p and is phosphorylated in response to DNA damage. EMBO J. 1998 Apr 1; 17(7):2055-66. PMID: 9524127; PMCID: PMC1170550.
      97. Elgersma Y, Elgersma-Hooisma M, Wenzel T, McCaffery JM, Farquhar MG, Subramani S. A mobile PTS2 receptor for peroxisomal protein import in Pichia pastoris. J Cell Biol. 1998 Feb 23; 140(4):807-20. PMID: 9472033.
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      98. Faber KN, Heyman JA, Subramani S. Two AAA family peroxins, PpPex1p and PpPex6p, interact with each other in an ATP-dependent manner and are associated with different subcellular membranous structures distinct from peroxisomes. Mol Cell Biol. 1998 Feb; 18(2):936-43. PMID: 9447990; PMCID: PMC108805.
      99. Subramani S. Components involved in peroxisome import, biogenesis, proliferation, turnover, and movement. Physiol Rev. 1998 Jan; 78(1):171-88. PMID: 9457172.
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      100. Faber KN, Elgersma Y, Heyman JA, Koller A, Lüers GH, Nuttley WM, Terlecky SR, Wenzel TJ, Subramani S. Use of Pichia pastoris as a model eukaryotic system. Peroxisome biogenesis. Methods Mol Biol. 1998; 103:121-47. PMID: 9680638.
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      101. Osman F, Subramani S. Double-strand break-induced recombination in eukaryotes. Prog Nucleic Acid Res Mol Biol. 1998; 58:263-99. PMID: 9308369.
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      102. Elgersma Y, Kwast L, van den Berg M, Snyder WB, Distel B, Subramani S, Tabak HF. Overexpression of Pex15p, a phosphorylated peroxisomal integral membrane protein required for peroxisome assembly in S.cerevisiae, causes proliferation of the endoplasmic reticulum membrane. EMBO J. 1997 Dec 15; 16(24):7326-41. PMID: 9405362; PMCID: PMC1170333.
      103. Subramani S. PEX genes on the rise. Nat Genet. 1997 Apr; 15(4):331-3. PMID: 9090374.
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      104. Wiemer EA, Wenzel T, Deerinck TJ, Ellisman MH, Subramani S. Visualization of the peroxisomal compartment in living mammalian cells: dynamic behavior and association with microtubules. J Cell Biol. 1997 Jan 13; 136(1):71-80. PMID: 9008704.
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      105. Terlecky SR, Wiemer EA, Nuttley WM, Walton PA, Subramani S. Signals, receptors, and cytosolic factors involved in peroxisomal protein import. Ann N Y Acad Sci. 1996 Dec 27; 804:11-20. PMID: 8993532.
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      106. Subramani S. Protein translocation into peroxisomes. J Biol Chem. 1996 Dec 20; 271(51):32483-6. PMID: 8955066.
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      107. Terlecky SR, Nuttley WM, Subramani S. The cytosolic and membrane components required for peroxisomal protein import. Experientia. 1996 Dec 15; 52(12):1050-4. PMID: 8988245.
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      108. Fortunato EA, Osman F, Subramani S. Analysis of spontaneous and double-strand break-induced recombination in rad mutants of S. pombe. Mutat Res. 1996 Dec 2; 364(3):14-60. PMID: 8960127.
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      109. Distel B, Erdmann R, Gould SJ, Blobel G, Crane DI, Cregg JM, Dodt G, Fujiki Y, Goodman JM, Just WW, Kiel JA, Kunau WH, Lazarow PB, Mannaerts GP, Moser HW, Osumi T, Rachubinski RA, Roscher A, Subramani S, Tabak HF, Tsukamoto T, Valle D, van der Klei I, van Veldhoven PP, Veenhuis M. A unified nomenclature for peroxisome biogenesis factors. J Cell Biol. 1996 Oct; 135(1):1-3. PMID: 8858157; PMCID: PMC2121017.
      110. Knudsen KE, Knudsen ES, Wang JY, Subramani S. p34cdc2 kinase activity is maintained upon activation of the replication checkpoint in Schizosaccharomyces pombe. Proc Natl Acad Sci U S A. 1996 Aug 6; 93(16):8278-83. PMID: 8710861; PMCID: PMC38661.
      111. Wiemer EA, Lüers GH, Faber KN, Wenzel T, Veenhuis M, Subramani S. Isolation and characterization of Pas2p, a peroxisomal membrane protein essential for peroxisome biogenesis in the methylotrophic yeast Pichia pastoris. J Biol Chem. 1996 Aug 2; 271(31):18973-80. PMID: 8702562.
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      112. Subramani S. Convergence of model systems for peroxisome biogenesis. Curr Opin Cell Biol. 1996 Aug; 8(4):513-8. PMID: 8791450.
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      113. Subramani S, Shah C, Madamwar D. Stability of invertase in reverse micelles. Appl Biochem Biotechnol. 1996 Jul; 60(1):33-9. PMID: 8756613.
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      114. Monosov EZ, Wenzel TJ, Lüers GH, Heyman JA, Subramani S. Labeling of peroxisomes with green fluorescent protein in living P. pastoris cells. J Histochem Cytochem. 1996 Jun; 44(6):581-9. PMID: 8666743.
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      115. Osman F, Fortunato EA, Subramani S. Double-strand break-induced mitotic intrachromosomal recombination in the fission yeast Schizosaccharomyces pombe. Genetics. 1996 Feb; 142(2):341-57. PMID: 8852835; PMCID: PMC1206970.
      116. Kanter-Smoler G, Knudsen KE, Jimenez G, Sunnerhagen P, Subramani S. Separation of phenotypes in mutant alleles of the Schizosaccharomyces pombe cell-cycle checkpoint gene rad1+. Mol Biol Cell. 1995 Dec; 6(12):1793-805. PMID: 8590806; PMCID: PMC301333.
      117. Rachubinski RA, Subramani S. How proteins penetrate peroxisomes. Cell. 1995 Nov 17; 83(4):525-8. PMID: 7585954.
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      118. Terlecky SR, Nuttley WM, McCollum D, Sock E, Subramani S. The Pichia pastoris peroxisomal protein PAS8p is the receptor for the C-terminal tripeptide peroxisomal targeting signal. EMBO J. 1995 Aug 1; 14(15):3627-34. PMID: 7641682; PMCID: PMC394437.
      119. Wiemer EA, Nuttley WM, Bertolaet BL, Li X, Francke U, Wheelock MJ, Anné UK, Johnson KR, Subramani S. Human peroxisomal targeting signal-1 receptor restores peroxisomal protein import in cells from patients with fatal peroxisomal disorders. J Cell Biol. 1995 Jul; 130(1):51-65. PMID: 7790377; PMCID: PMC2120514.
      120. Walton PA, Hill PE, Subramani S. Import of stably folded proteins into peroxisomes. Mol Biol Cell. 1995 Jun; 6(6):675-83. PMID: 7579687; PMCID: PMC301228.
      121. Birkenbihl RP, Subramani S. The rad21 gene product of Schizosaccharomyces pombe is a nuclear, cell cycle-regulated phosphoprotein. J Biol Chem. 1995 Mar 31; 270(13):7703-11. PMID: 7706319.
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      122. Wiemer EA, Terlecky SR, Nuttley WM, Subramani S. Characterization of the yeast and human receptors for the carboxy-terminal tripeptide peroxisomal targeting signal. Cold Spring Harb Symp Quant Biol. 1995; 60:637-48. PMID: 8824437.
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      123. Heyman JA, Monosov E, Subramani S. Role of the PAS1 gene of Pichia pastoris in peroxisome biogenesis. J Cell Biol. 1994 Dec; 127(5):1259-73. PMID: 7962088; PMCID: PMC2120248.
      124. Long KE, Sunnerhagen P, Subramani S. The Schizosaccharomyces pombe rad1 gene consists of three exons and the cDNA sequence is partially homologous to the Ustilago maydis REC1 cDNA. Gene. 1994 Oct 11; 148(1):155-9. PMID: 7926829.
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      125. Ferguson AT, Subramani S. Complex functional interactions at the early enhancer of the PQ strain of BK virus. J Virol. 1994 Jul; 68(7):4274-86. PMID: 8207802; PMCID: PMC236350.
      126. Walton PA, Wendland M, Subramani S, Rachubinski RA, Welch WJ. Involvement of 70-kD heat-shock proteins in peroxisomal import. J Cell Biol. 1994 Jun; 125(5):1037-46. PMID: 8195287; PMCID: PMC2120043.
      127. Alvares K, Fan C, Dadras SS, Yeldandi AV, Rachubinski RA, Capone JP, Subramani S, Iannaccone PM, Rao MS, Reddy JK. An upstream region of the enoyl-coenzyme A hydratase/3-hydroxyacyl-coenzyme A dehydrogenase gene directs luciferase expression in liver in response to peroxisome proliferators in transgenic mice. Cancer Res. 1994 May 1; 54(9):2303-6. PMID: 8162569.
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      128. Glover JR, Andrews DW, Subramani S, Rachubinski RA. Mutagenesis of the amino targeting signal of Saccharomyces cerevisiae 3-ketoacyl-CoA thiolase reveals conserved amino acids required for import into peroxisomes in vivo. J Biol Chem. 1994 Mar 11; 269(10):7558-63. PMID: 8125978.
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      129. Carr AM, Schmidt H, Kirchhoff S, Muriel WJ, Sheldrick KS, Griffiths DJ, Basmacioglu CN, Subramani S, Clegg M, Nasim A. The rad16 gene of Schizosaccharomyces pombe: a homolog of the RAD1 gene of Saccharomyces cerevisiae. Mol Cell Biol. 1994 Mar; 14(3):2029-40. PMID: 8114734; PMCID: PMC358563.
      130. Wiemer EA, Subramani S. Protein import deficiencies in human peroxisomal disorders. Mol Genet Med. 1994; 4:119-52. PMID: 7981628.
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      131. Wendland M, Subramani S. Presence of cytoplasmic factors functional in peroxisomal protein import implicates organelle-associated defects in several human peroxisomal disorders. J Clin Invest. 1993 Nov; 92(5):2462-8. PMID: 7693762; PMCID: PMC288431.
      132. Spong AP, Subramani S. Cloning and characterization of PAS5: a gene required for peroxisome biogenesis in the methylotrophic yeast Pichia pastoris. J Cell Biol. 1993 Nov; 123(3):535-48. PMID: 8227124; PMCID: PMC2200126.
      133. Zhang B, Marcus SL, Miyata KS, Subramani S, Capone JP, Rachubinski RA. Characterization of protein-DNA interactions within the peroxisome proliferator-responsive element of the rat hydratase-dehydrogenase gene. J Biol Chem. 1993 Jun 15; 268(17):12939-45. PMID: 8389766.
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      134. Marcus SL, Miyata KS, Zhang B, Subramani S, Rachubinski RA, Capone JP. Diverse peroxisome proliferator-activated receptors bind to the peroxisome proliferator-responsive elements of the rat hydratase/dehydrogenase and fatty acyl-CoA oxidase genes but differentially induce expression. Proc Natl Acad Sci U S A. 1993 Jun 15; 90(12):5723-7. PMID: 8390676; PMCID: PMC46794.
      135. McCollum D, Monosov E, Subramani S. The pas8 mutant of Pichia pastoris exhibits the peroxisomal protein import deficiencies of Zellweger syndrome cells--the PAS8 protein binds to the COOH-terminal tripeptide peroxisomal targeting signal, and is a member of the TPR protein family. J Cell Biol. 1993 May; 121(4):761-74. PMID: 8098333; PMCID: PMC2119792.
      136. Wendland M, Subramani S. Cytosol-dependent peroxisomal protein import in a permeabilized cell system. J Cell Biol. 1993 Feb; 120(3):675-85. PMID: 8425896; PMCID: PMC2119540.
      137. Subramani S. Protein import into peroxisomes and biogenesis of the organelle. Annu Rev Cell Biol. 1993; 9:445-78. PMID: 8280468.
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      138. Birkenbihl RP, Subramani S. Cloning and characterization of rad21 an essential gene of Schizosaccharomyces pombe involved in DNA double-strand-break repair. Nucleic Acids Res. 1992 Dec 25; 20(24):6605-11. PMID: 1480481; PMCID: PMC334577.
      139. Blattner J, Swinkels B, Dörsam H, Prospero T, Subramani S, Clayton C. Glycosome assembly in trypanosomes: variations in the acceptable degeneracy of a COOH-terminal microbody targeting signal. J Cell Biol. 1992 Dec; 119(5):1129-36. PMID: 1447292; PMCID: PMC2289717.
      140. Seaton BL, Yucel J, Sunnerhagen P, Subramani S. Isolation and characterization of the Schizosaccharomyces pombe rad3 gene, involved in the DNA damage and DNA synthesis checkpoints. Gene. 1992 Sep 21; 119(1):83-9. PMID: 1398093.
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      141. Zhang B, Marcus SL, Sajjadi FG, Alvares K, Reddy JK, Subramani S, Rachubinski RA, Capone JP. Identification of a peroxisome proliferator-responsive element upstream of the gene encoding rat peroxisomal enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase. Proc Natl Acad Sci U S A. 1992 Aug 15; 89(16):7541-5. PMID: 1502166; PMCID: PMC49746.
      142. Gould SJ, McCollum D, Spong AP, Heyman JA, Subramani S. Development of the yeast Pichia pastoris as a model organism for a genetic and molecular analysis of peroxisome assembly. Yeast. 1992 Aug; 8(8):613-28. PMID: 1441741.
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      143. Walton PA, Gould SJ, Rachubinski RA, Subramani S, Feramisco JR. Transport of microinjected alcohol oxidase from Pichia pastoris into vesicles in mammalian cells: involvement of the peroxisomal targeting signal. J Cell Biol. 1992 Aug; 118(3):499-508. PMID: 1639840.
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      144. Swinkels BW, Gould SJ, Subramani S. Targeting efficiencies of various permutations of the consensus C-terminal tripeptide peroxisomal targeting signal. FEBS Lett. 1992 Jun 29; 305(2):133-6. PMID: 1618341.
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      145. Jimenez G, Yucel J, Rowley R, Subramani S. The rad3+ gene of Schizosaccharomyces pombe is involved in multiple checkpoint functions and in DNA repair. Proc Natl Acad Sci U S A. 1992 Jun 1; 89(11):4952-6. PMID: 1594599.
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      146. Rowley R, Subramani S, Young PG. Checkpoint controls in Schizosaccharomyces pombe: rad1. EMBO J. 1992 Apr; 11(4):1335-42. PMID: 1563349; PMCID: PMC556582.
      147. Distel B, Gould SJ, Voorn-Brouwer T, van der Berg M, Tabak HF, Subramani S. The carboxyl-terminal tripeptide serine-lysine-leucine of firefly luciferase is necessary but not sufficient for peroxisomal import in yeast. New Biol. 1992 Feb; 4(2):157-65. PMID: 1554690.
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      148. Walton PA, Gould SJ, Feramisco JR, Subramani S. Transport of microinjected proteins into peroxisomes of mammalian cells: inability of Zellweger cell lines to import proteins with the SKL tripeptide peroxisomal targeting signal. Mol Cell Biol. 1992 Feb; 12(2):531-41. PMID: 1732729.
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      149. Subramani S. Targeting of proteins into the peroxisomal matrix. J Membr Biol. 1992 Jan; 125(2):99-106. PMID: 1552566.
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      150. Hodge VJ, Gould SJ, Subramani S, Moser HW, Krisans SK. Normal cholesterol synthesis in human cells requires functional peroxisomes. Biochem Biophys Res Commun. 1991 Dec 16; 181(2):537-41. PMID: 1755834.
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      151. Swinkels BW, Gould SJ, Bodnar AG, Rachubinski RA, Subramani S. A novel, cleavable peroxisomal targeting signal at the amino-terminus of the rat 3-ketoacyl-CoA thiolase. EMBO J. 1991 Nov; 10(11):3255-62. PMID: 1680677; PMCID: PMC453050.
      152. Subramani S. Radiation resistance in Schizosaccharomyces pombe. Mol Microbiol. 1991 Oct; 5(10):2311-4. PMID: 1791747.
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      153. Keller GA, Krisans S, Gould SJ, Sommer JM, Wang CC, Schliebs W, Kunau W, Brody S, Subramani S. Evolutionary conservation of a microbody targeting signal that targets proteins to peroxisomes, glyoxysomes, and glycosomes. J Cell Biol. 1991 Sep; 114(5):893-904. PMID: 1831458; PMCID: PMC2289121.
      154. Sajjadi FG, Pasquale EB, Subramani S. Identification of a new eph-related receptor tyrosine kinase gene from mouse and chicken that is developmentally regulated and encodes at least two forms of the receptor. New Biol. 1991 Aug; 3(8):769-78. PMID: 1657122.
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      155. Flaegstad T, Sundsfjord A, Arthur RR, Pedersen M, Traavik T, Subramani S. Amplification and sequencing of the control regions of BK and JC virus from human urine by polymerase chain reaction. Virology. 1991 Feb; 180(2):553-60. PMID: 1846488.
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      156. Wright R, Keller G, Gould SJ, Subramani S, Rine J. Cell-type control of membrane biogenesis induced by HMG-CoA reductase. New Biol. 1990 Oct; 2(10):915-21. PMID: 2078559.
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      157. Sundsfjord A, Johansen T, Flaegstad T, Moens U, Villand P, Subramani S, Traavik T. At least two types of control regions can be found among naturally occurring BK virus strains. J Virol. 1990 Aug; 64(8):3864-71. PMID: 2164600; PMCID: PMC249682.
      158. Sunnerhagen P, Seaton BL, Nasim A, Subramani S. Cloning and analysis of a gene involved in DNA repair and recombination, the rad1 gene of Schizosaccharomyces pombe. Mol Cell Biol. 1990 Jul; 10(7):3750-60. PMID: 2355921; PMCID: PMC360827.
      159. Gould SJ, Keller GA, Schneider M, Howell SH, Garrard LJ, Goodman JM, Distel B, Tabak H, Subramani S. Peroxisomal protein import is conserved between yeast, plants, insects and mammals. EMBO J. 1990 Jan; 9(1):85-90. PMID: 2104803; PMCID: PMC551633.
      160. Gould SJ, Krisans S, Keller GA, Subramani S. Antibodies directed against the peroxisomal targeting signal of firefly luciferase recognize multiple mammalian peroxisomal proteins. J Cell Biol. 1990 Jan; 110(1):27-34. PMID: 1688562; PMCID: PMC2115984.
      161. Zijlstra M, Li E, Sajjadi F, Subramani S, Jaenisch R. Germ-line transmission of a disrupted beta 2-microglobulin gene produced by homologous recombination in embryonic stem cells. Nature. 1989 Nov 23; 342(6248):435-8. PMID: 2685607.
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      162. Cassill JA, Subramani S. A naturally occurring deletion in the enhancer repeats of the human papovavirus BK optimizes early enhancer function at the expense of late promoter activity. Virology. 1989 May; 170(1):296-8. PMID: 2541546.
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      163. Gould SJ, Keller GA, Hosken N, Wilkinson J, Subramani S. A conserved tripeptide sorts proteins to peroxisomes. J Cell Biol. 1989 May; 108(5):1657-64. PMID: 2654139; PMCID: PMC2115556.
      164. Deyerle KL, Subramani S. Human papovavirus BK early gene regulation in nonpermissive cells. Virology. 1989 Apr; 169(2):385-96. PMID: 2539697.
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      165. Subramani S. Analysis of recombination in mammalian cells using SV40 and SV40-derived vectors. Mutat Res. 1989 Mar-May; 220(2-3):221-34. PMID: 2538740.
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      166. Gould SJ, Subramani S, Scheffler IE. Use of the DNA polymerase chain reaction for homology probing: isolation of partial cDNA or genomic clones encoding the iron-sulfur protein of succinate dehydrogenase from several species. Proc Natl Acad Sci U S A. 1989 Mar; 86(6):1934-8. PMID: 2494655.
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      167. Cassill JA, Deyerle KL, Subramani S. Unidirectional deletion and linker scan analysis of the late promoter of the human papovavirus BK. Virology. 1989 Mar; 169(1):172-81. PMID: 2538030.
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      168. Deyerle KL, Sajjadi FG, Subramani S. Analysis of origin of DNA replication of human papovavirus BK. J Virol. 1989 Jan; 63(1):356-65. PMID: 2535736; PMCID: PMC247691.
      169. O'Connor DT, Subramani S. Do transcriptional enhancers also augment DNA replication? Nucleic Acids Res. 1988 Dec 9; 16(23):11207-22. PMID: 2849759.
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      170. Gould SJ, Subramani S. Firefly luciferase as a tool in molecular and cell biology. Anal Biochem. 1988 Nov 15; 175(1):5-13. PMID: 3072883.
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      171. Gould SJ, Keller GA, Subramani S. Identification of peroxisomal targeting signals located at the carboxy terminus of four peroxisomal proteins. J Cell Biol. 1988 Sep; 107(3):897-905. PMID: 2901422; PMCID: PMC2115268.
      172. Deyerle KL, Subramani S. Linker scan analysis of the early regulatory region of human papovavirus BK. J Virol. 1988 Sep; 62(9):3378-87. PMID: 2841491; PMCID: PMC253461.
      173. Cassill JA, Subramani S. The late promoter of the human papovavirus BK is contained within the early promoter enhancer region. Virology. 1988 Sep; 166(1):175-85. PMID: 2842943.
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      174. Gould SG, Keller GA, Subramani S. Identification of a peroxisomal targeting signal at the carboxy terminus of firefly luciferase. J Cell Biol. 1987 Dec; 105(6 Pt 2):2923-31. PMID: 3480287; PMCID: PMC2114716.
      175. Keller GA, Gould S, Deluca M, Subramani S. Firefly luciferase is targeted to peroxisomes in mammalian cells. Proc Natl Acad Sci U S A. 1987 May; 84(10):3264-8. PMID: 3554235; PMCID: PMC304849.
      176. Rubnitz J, Subramani S. Correction of deletions in mammalian cells by gene conversion. Somat Cell Mol Genet. 1987 May; 13(3):183-90. PMID: 3299746.
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      177. Deyerle KL, Cassill JA, Subramani S. Analysis of the early regulatory region of the human papovavirus BK. Virology. 1987 May; 158(1):181-93. PMID: 3033888.
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      178. de Wet JR, Wood KV, DeLuca M, Helinski DR, Subramani S. Firefly luciferase gene: structure and expression in mammalian cells. Mol Cell Biol. 1987 Feb; 7(2):725-37. PMID: 3821727.
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      179. Peabody DS, Subramani S, Berg P. Effect of upstream reading frames on translation efficiency in simian virus 40 recombinants. Mol Cell Biol. 1986 Jul; 6(7):2704-11. PMID: 3023946; PMCID: PMC367827.
      180. Rubnitz J, Subramani S. Extrachromosomal and chromosomal gene conversion in mammalian cells. Mol Cell Biol. 1986 May; 6(5):1608-14. PMID: 3537707; PMCID: PMC367687.
      181. Subramani S. Rescue of chromosomal T-antigen sequences onto extrachromosomally replicating, defective simian virus 40 DNA by homologous recombination. Mol Cell Biol. 1986 Apr; 6(4):1320-5. PMID: 3023881; PMCID: PMC367645.
      182. Subramani S, Rubnitz J. Recombination events after transient infection and stable integration of DNA into mouse cells. Mol Cell Biol. 1985 Apr; 5(4):659-66. PMID: 3990687; PMCID: PMC366767.
      183. Rubnitz J, Subramani S. Rapid assay for extrachromosomal homologous recombination in monkey cells. Mol Cell Biol. 1985 Mar; 5(3):529-37. PMID: 2985956; PMCID: PMC366745.
      184. Rubnitz J, Subramani S. The minimum amount of homology required for homologous recombination in mammalian cells. Mol Cell Biol. 1984 Nov; 4(11):2253-8. PMID: 6096689; PMCID: PMC369052.
      185. Pratt D, Subramani S. Nucleotide sequence of the Escherichia coli xanthine-guanine phosphoribosyl transferase gene. Nucleic Acids Res. 1983 Dec 20; 11(24):8817-23. PMID: 6324103; PMCID: PMC326626.
      186. Subramani S, Southern PJ. Analysis of gene expression using simian virus 40 vectors. Anal Biochem. 1983 Nov; 135(1):1-15. PMID: 6322609.
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      187. Subramani S, Berg P. Homologous and nonhomologous recombination in monkey cells. Mol Cell Biol. 1983 Jun; 3(6):1040-52. PMID: 6308421; PMCID: PMC368633.
      188. Jolly DJ, Esty AC, Subramani S, Friedmann T, Verma IM. Elements in the long terminal repeat of murine retroviruses enhance stable transformation by thymidine kinase gene. Nucleic Acids Res. 1983 Mar 25; 11(6):1855-72. PMID: 6300781.
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      189. Subramani S, Mulligan R, Berg P. Expression of the mouse dihydrofolate reductase complementary deoxyribonucleic acid in simian virus 40 vectors. Mol Cell Biol. 1981 Sep; 1(9):854-64. PMID: 9279398; PMCID: PMC369369.
      190. Fraley R, Subramani S, Berg P, Papahadjopoulos D. Introduction of liposome-encapsulated SV40 DNA into cells. J Biol Chem. 1980 Nov 10; 255(21):10431-5. PMID: 6253474.
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