Theresa Guo

Title(s)Assistant Professor In Residence, Surgery
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
ORCID ORCID Icon0000-0002-1689-3275 Additional info
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    Collapse Biography 
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    Massachusetts Institute of Technology, Cambridge, MABSMechanical Engineering
    Cleveland Clinic Lerner College of Medicine, Cleveland, OHMD
    Johns Hopkins Hospital, Baltimore, MDResidencyOtolaryngology-Head & Neck Surgery
    MD Anderson Cancer Center, Houston, TXFellowshipHead & Neck Surgical Oncology

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    Our research work seeks to understand post transcriptional changes, including alternative splicing events, which are prevalent in head and neck cancer. We utilize computational biology methods to achieve a deeper understanding of these post transcriptional genomic alterations that are not readily apparent through sequencing alone. Splicing alteration and post transcriptional alterations represent an understudied gap in genomic knowledge that seeks to understand changes that occur between DNA mutations and ultimately expressed protein phenotypes in tumors. By harnessing computational tools, we can come closer to translating this genomic knowledge towards the delivery of precision cancer care in head and neck cancer.
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    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Assessing Long-Term Quality of Life Concerns Through Survivorship Clinic in Head and Neck Cancer Patients. Otolaryngol Head Neck Surg. 2024 Oct 01. Yousef A, Nichol A, Luu B, Montesa C, Ramsey C, Verpukhovskiy P, Blumenfeld L, Linnemeyer-Risser K, Guo T. PMID: 39353158.
      View in: PubMed   Mentions:    Fields:    
    2. The Mutational and Microenvironmental Landscape of Cutaneous Squamous Cell Carcinoma: A Review. Cancers (Basel). 2024 Aug 21; 16(16). Hosseini TM, Park SJ, Guo T. PMID: 39199674; PMCID: PMC11352924.
      View in: PubMed   Mentions:
    3. Factors associated with total laryngectomy following organ-preserving treatment of laryngeal SCC. Laryngoscope Investig Otolaryngol. 2024 Aug; 9(4):e1317. Victor MT, Faraji F, Voora R, Kalavacherla S, Mell LK, Rose BS, Guo TW. PMID: 39108948; PMCID: PMC11301822.
      View in: PubMed   Mentions:
    4. Molecular patterns and mechanisms of tumorigenesis in HPV-associated and HPV-independent sinonasal squamous cell carcinoma. bioRxiv. 2024 Jun 18. Zamuner FT, Gunti S, Starrett GJ, Faraji F, Toni T, Saraswathula A, Vu K, Gupta A, Zhang Y, Faden DL, Bryan ME, Guo T, Rowan NR, Ramanathan M, Lane AP, Fakhry C, Gallia GL, Allen CT, Rooper LM, London NR. PMID: 38979305; PMCID: PMC11230460.
      View in: PubMed   Mentions:
    5. Sex-Specific Survival and Treatment Delay in Oropharyngeal Squamous Cell Carcinoma. Otolaryngol Head Neck Surg. 2024 Sep; 171(3):764-776. Kalavacherla S, Poulhazan S, Funk E, Sacco AG, Guo T. PMID: 38678390.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    6. Clinical and genomic characterization of chemoradiation-resistant HPV-positive oropharyngeal squamous cell carcinoma. Front Oncol. 2024; 14:1336577. Guo T, Zamuner F, Ting S, Chen L, Rooper L, Tamayo P, Fakhry C, Gaykalova D, Mehra R. PMID: 38505587; PMCID: PMC10949886.
      View in: PubMed   Mentions:
    7. Factors associated with unknown primary status in head and neck squamous cell carcinoma. Oral Oncol. 2024 Jan; 148:106650. Kalavacherla S, Li V, Voora R, Victor M, Faraji F, Guo T. PMID: 38039876.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    8. Defining the relationship of salivary gland malignancies to novel cell subpopulations in human salivary glands using single nucleus RNA-sequencing. Int J Cancer. 2024 Apr 15; 154(8):1492-1503. Nakagawa T, Santos J, Nasamran CA, Sen P, Sadat S, Monther A, Bendik J, Ebisumoto K, Hu J, Preissl S, Guo T, Vavinskaya V, Fisch KM, Califano JA. PMID: 37971144.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    9. Antibody dependent cell-mediated cytotoxicity selection pressure induces diverse mechanisms of resistance. Cancer Biol Ther. 2023 12 31; 24(1):2269637. Zahavi DJ, Erbe R, Zhang YW, Guo T, Malchiodi ZX, Maynard R, Lekan A, Gallagher R, Wulfkuhle J, Petricoin E, Jablonski SA, Fertig EJ, Weiner LM. PMID: 37878417; PMCID: PMC10601508.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    10. Fluorescent Guided Sentinel Lymph Mapping of the Oral Cavity with Fluorescent-Labeled Tilmanocept. Laryngoscope. 2024 03; 134(3):1299-1307. Guo T, Jang SS, Ogawa R, Davis M, Ashworth E, Barback CV, Hall DJ, Vera DR. PMID: 37668315; PMCID: PMC10912359.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    11. A Network Landscape of HPVOPC Reveals Methylation Alterations as Significant Drivers of Gene Expression via an Immune-Mediated GPCR Signal. Cancers (Basel). 2023 Sep 01; 15(17). Qualliotine JR, Nakagawa T, Rosenthal SB, Sadat S, Ballesteros-Merino C, Xu G, Mark A, Nasamran A, Gutkind JS, Fisch KM, Guo T, Fox BA, Khan Z, Molinolo AA, Califano JA. PMID: 37686653; PMCID: PMC10486378.
      View in: PubMed   Mentions:
    12. Insurance Status is Associated With Recurrence in Cutaneous Head and Neck Squamous Cell Carcinoma. Otolaryngol Head Neck Surg. 2024 Jan; 170(1):132-140. Victor MT, Zheng W, Park SJ, Jiang SIB, Guo TW. PMID: 37622529.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    13. Early Improved Functional Outcomes in Head and Neck Cancer Patients with Primary Tumor Detection. Laryngoscope. 2024 02; 134(2):701-707. Kalavacherla S, Bernard B, Kim SS, Dornisch A, Blumenfeld L, Linnemeyer-Risser K, Sanghvi P, Guo T. PMID: 37462352; PMCID: PMC10874284.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    14. Transoral Surgery in HPV-Positive Oropharyngeal Carcinoma: Oncologic Outcomes in the Veterans Affairs System. Laryngoscope. 2024 01; 134(1):207-214. Faraji F, Kumar A, Voora R, Soliman SI, Cherry D, Courtney PT, Finegersh A, Guo T, Cohen E, Califano JA, Mell L, Rose B, Orosco RK. PMID: 37255050; PMCID: PMC10687307.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    15. Evolving treatment paradigms in recurrent and metastatic head and neck squamous cell carcinoma: the emergence of immunotherapy. Transl Cancer Res. 2023 May 31; 12(5):1353-1358. Faraji F, Cohen EEW, Guo TW. PMID: 37304550; PMCID: PMC10248584.
      View in: PubMed   Mentions: 1  
    16. Patterns of Lymph Node Metastasis in Parotid Cancer and Implications for Extent of Neck Dissection. Otolaryngol Head Neck Surg. 2023 05; 168(5):1067-1078. Voora RS, Panuganti B, Califano J, Coffey C, Guo T. PMID: 36939401.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    17. A Young Man Presenting With Tongue Lesions. JAMA Otolaryngol Head Neck Surg. 2023 01 01; 149(1):89-90. Victor M, Vavinskaya V, Guo T. PMID: 36416858.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    18. Cutaneous Squamous Cell Carcinoma With Orbital Extension. JAMA Ophthalmol. 2022 11 01; 140(11):1133-1134. Park KS, Guo T, Liu CY. PMID: 36201188.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    19. Role of sentinel lymph node biopsy for oral squamous cell carcinoma: Current evidence and future challenges. Head Neck. 2023 Jan; 45(1):251-265. Jang SS, Davis ME, Vera DR, Lai SY, Guo TW. PMID: 36193862; PMCID: PMC11081060.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    20. Updates in the management of unknown primary of the head and neck. Front Oncol. 2022; 12:991838. Kalavacherla S, Sanghvi P, Lin GY, Guo T. PMID: 36185196; PMCID: PMC9521035.
      View in: PubMed   Mentions: 3  
    21. Necrotizing Tracheitis Complicated by Tracheal Wall Perforation. Ear Nose Throat J. 2022 Dec; 101(10_suppl):26S-29S. Louie BH, Stramiello J, Senyei G, Weissbrod P, Boys J, Cheng G, Guo T. PMID: 36028929.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    22. Current perspectives on recurrent HPV-mediated oropharyngeal cancer. Front Oncol. 2022; 12:966899. Guo T, Kang SY, Cohen EEW. PMID: 36059671; PMCID: PMC9433540.
      View in: PubMed   Mentions: 9  
    23. Extrachromosomal DNA in HPV-Mediated Oropharyngeal Cancer Drives Diverse Oncogene Transcription. Clin Cancer Res. 2021 12 15; 27(24):6772-6786. Pang J, Nguyen N, Luebeck J, Ball L, Finegersh A, Ren S, Nakagawa T, Flagg M, Sadat S, Mischel PS, Xu G, Fisch K, Guo T, Cahill G, Panuganti B, Bafna V, Califano J. PMID: 34548317; PMCID: PMC8710294.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    24. Outcomes of patients with oropharyngeal squamous cell carcinoma treated with induction chemotherapy followed by concurrent chemoradiation compared with those treated with concurrent chemoradiation. Cancer. 2021 08 15; 127(16):2916-2925. Guo TW, Saiyed F, Yao CMKL, Kiong KL, Martinez J, Sacks R, Lee JJ, Moreno AC, Frank SJ, Rosenthal DI, Glisson BS, Ferrarotto R, Mott FE, Johnson FM, Myers JN. PMID: 33873251.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    25. Characterizing distant metastases and survival in oropharyngeal squamous cell carcinoma. Head Neck. 2021 07; 43(7):2101-2109. Saiyed FK, Guo T, Johnson F, Myers JN. PMID: 33738875; PMCID: PMC8251991.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    26. Impact of provider type and number of providers on surveillance testing among survivors of head and neck cancers. Cancer. 2021 05 15; 127(10):1699-1711. Yao CMKL, Fu S, Tam S, Kiong KL, Guo T, Zhao H, Giordano SH, Sturgis EM, Lewis CM. PMID: 33471396.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    27. Reciprocal activation of HEY1 and NOTCH4 under SOX2 control promotes EMT in head and neck squamous cell carcinoma. Int J Oncol. 2021 02; 58(2):226-237. Fukusumi T, Guo TW, Ren S, Haft S, Liu C, Sakai A, Ando M, Saito Y, Sadat S, Califano JA. PMID: 33491747; PMCID: PMC7864008.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    28. HPV E2, E4, E5 drive alternative carcinogenic pathways in HPV positive cancers. Oncogene. 2020 10; 39(40):6327-6339. Ren S, Gaykalova DA, Guo T, Favorov AV, Fertig EJ, Tamayo P, Callejas-Valera JL, Allevato M, Gilardi M, Santos J, Fukusumi T, Sakai A, Ando M, Sadat S, Liu C, Xu G, Fisch KM, Wang Z, Molinolo AA, Gutkind JS, Ideker T, Koch WM, Califano JA. PMID: 32848210; PMCID: PMC7529583.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansAnimalsCells
    29. Impact of neoadjuvant chemotherapy on perioperative morbidity after major surgery for head and neck cancer. Cancer. 2020 10 01; 126(19):4304-4314. Kiong KL, Lin FY, Yao CMKL, Guo T, Ferrarotto R, Weber RS, Lewis CM. PMID: 32706401.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    30. Impact of the COVID-19 pandemic on Otolaryngology trainee education. Head Neck. 2020 10; 42(10):2782-2790. Guo T, Kiong KL, Yao CMKL, Windon M, Zebda D, Jozaghi Y, Zhao X, Hessel AC, Hanna EY. PMID: 32666664; PMCID: PMC7405272.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    31. Head and neck surgical oncology in the time of a pandemic: Subsite-specific triage guidelines during the COVID-19 pandemic. Head Neck. 2020 06; 42(6):1194-1201. MD Anderson Head and Neck Surgery Treatment Guidelines Consortium, Consortium members, Maniakas A, Jozaghi Y, Zafereo ME, Sturgis EM, Su SY, Gillenwater AM, Gidley PW, Lewis CM, Diaz E, Goepfert RP, Kupferman ME, Gross ND, Hessel AC, Pytynia KB, Nader ME, Wang JR, Lango MN, Kiong KL, Guo T, Zhao X, Yao CMKL, Appelbaum E, Alpard J, Garcia JA, Terry S, Flynn JE, Bauer S, Fournier D, Burgess CG, Wideman C, Johnston M, You C, De Luna R, Joseph L, Diersing J, Prescott K, Heiberger K, Mugartegui L, Rodriguez J, Zendehdel S, Sellers J, Friddell RA, Thomas A, Khanjae SJ, Schwarzlose KB, Chambers MS, Hofstede TM, Cardoso RC, Wesson RA, Won A, Otun AO, Gombos DS, Al-Zubidi N, Hutcheson KA, Gunn GB, Rosenthal DI, Gillison ML, Ferrarotto R, Weber RS, Hanna EY, Myers JN, Lai SY. PMID: 32342541; PMCID: PMC7267348.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCellsPHPublic Health
    32. Aberrant expression of CPSF1 promotes head and neck squamous cell carcinoma via regulating alternative splicing. PLoS One. 2020; 15(5):e0233380. Sakai A, Ando M, Fukusumi T, Ren S, Liu C, Qualliotine J, Haft S, Sadat S, Saito Y, Guo TW, Xu G, Sasik R, Fisch KM, Gutkind JS, Fertig EJ, Molinolo AA, Califano JA. PMID: 32437477; PMCID: PMC7241804.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    33. Overview of COVID-19 testing and implications for otolaryngologists. Head Neck. 2020 Jul; 42(7):1629-1633. Vinh DB, Zhao X, Kiong KL, Guo T, Jozaghi Y, Yao C, Kelley JM, Hanna EY. PMID: 32342570; PMCID: PMC7267427.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCellsPHPublic Health
    34. Changing practice patterns in head and neck oncologic surgery in the early COVID-19 era. Head Neck. 2020 06; 42(6):1179-1186. Kiong KL, Guo T, Yao CMKL, Gross ND, Hanasono MM, Ferrarotto R, Rosenthal DI, Myers JN, Hanna EY, Lai SY. PMID: 32459061.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansPHPublic Health
    35. Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma. Epigenetics. 2020 09; 15(9):959-971. Guo T, Zambo KDA, Zamuner FT, Ou T, Hopkins C, Kelley DZ, Wulf HA, Winkler E, Erbe R, Danilova L, Considine M, Sidransky D, Favorov A, Florea L, Fertig EJ, Gaykalova DA. PMID: 32164487; PMCID: PMC7518675.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    36. Targeting Viral DNA and Promoter Hypermethylation in Salivary Rinses for Recurrent HPV-Positive Oropharyngeal Cancer. Otolaryngol Head Neck Surg. 2020 04; 162(4):512-519. Shen S, Saito Y, Ren S, Liu C, Guo T, Qualliotine J, Khan Z, Sadat S, Califano JA. PMID: 32041482; PMCID: PMC7683010.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    37. Melanoblast transcriptome analysis reveals pathways promoting melanoma metastasis. Nat Commun. 2020 01 16; 11(1):333. Marie KL, Sassano A, Yang HH, Michalowski AM, Michael HT, Guo T, Tsai YC, Weissman AM, Lee MP, Jenkins LM, Zaidi MR, Pérez-Guijarro E, Day CP, Ylaya K, Hewitt SM, Patel NL, Arnheiter H, Davis S, Meltzer PS, Merlino G, Mishra PJ. PMID: 31949145; PMCID: PMC6965108.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansAnimalsCells
    38. Cannabinoids Promote Progression of HPV-Positive Head and Neck Squamous Cell Carcinoma via p38 MAPK Activation. Clin Cancer Res. 2020 06 01; 26(11):2693-2703. Liu C, Sadat SH, Ebisumoto K, Sakai A, Panuganti BA, Ren S, Goto Y, Haft S, Fukusumi T, Ando M, Saito Y, Guo T, Tamayo P, Yeerna H, Kim W, Hubbard J, Sharabi AB, Gutkind JS, Califano JA. PMID: 31932491; PMCID: PMC7538010.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    39. A novel splice variant of LOXL2 promotes progression of human papillomavirus-negative head and neck squamous cell carcinoma. Cancer. 2020 02 15; 126(4):737-748. Liu C, Guo T, Sakai A, Ren S, Fukusumi T, Ando M, Sadat S, Saito Y, Califano JA. PMID: 31721164.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    40. Differentially Methylated Super-Enhancers Regulate Target Gene Expression in Human Cancer. Sci Rep. 2019 10 21; 9(1):15034. Flam EL, Danilova L, Kelley DZ, Stavrovskaya E, Guo T, Considine M, Qian J, Califano JA, Favorov A, Fertig EJ, Gaykalova DA. PMID: 31636280; PMCID: PMC6803762.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    41. Publisher Correction: Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers. Nat Commun. 2019 May 29; 10(1):2415. Ando M, Saito Y, Xu G, Bui NQ, Medetgul-Ernar K, Pu M, Fisch K, Ren S, Sakai A, Fukusumi T, Liu C, Haft S, Pang J, Mark A, Gaykalova DA, Guo T, Favorov AV, Yegnasubramanian S, Fertig EJ, Ha P, Tamayo P, Yamasoba T, Ideker T, Messer K, Califano JA. PMID: 31142745; PMCID: PMC6541594.
      View in: PubMed   Mentions: 1     Fields:    
    42. Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers. Nat Commun. 2019 05 16; 10(1):2188. Ando M, Saito Y, Xu G, Bui NQ, Medetgul-Ernar K, Pu M, Fisch K, Ren S, Sakai A, Fukusumi T, Liu C, Haft S, Pang J, Mark A, Gaykalova DA, Guo T, Favorov AV, Yegnasubramanian S, Fertig EJ, Ha P, Tamayo P, Yamasoba T, Ideker T, Messer K, Califano JA. PMID: 31097695; PMCID: PMC6522544.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansCells
    43. Mutation of chromatin regulators and focal hotspot alterations characterize human papillomavirus-positive oropharyngeal squamous cell carcinoma. Cancer. 2019 07 15; 125(14):2423-2434. Haft S, Ren S, Xu G, Mark A, Fisch K, Guo TW, Khan Z, Pang J, Ando M, Liu C, Sakai A, Fukusumi T, Califano JA. PMID: 30933315; PMCID: PMC6602825.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    44. Variations in HPV function are associated with survival in squamous cell carcinoma. JCI Insight. 2019 Jan 10; 4(1). Gleber-Netto FO, Rao X, Guo T, Xi Y, Gao M, Shen L, Erikson K, Kalu NN, Ren S, Xu G, Fisch KM, Akagi K, Seiwert T, Gillison M, Frederick MJ, Johnson FM, Wang J, Myers JN, Califano J, Skinner HD, Pickering CR. PMID: 30626753; PMCID: PMC6485353.
      View in: PubMed   Mentions: 42     Fields:    
    45. Discovery and development of differentially methylated regions in human papillomavirus-related oropharyngeal squamous cell carcinoma. Int J Cancer. 2018 11 15; 143(10):2425-2436. Ren S, Gaykalova D, Wang J, Guo T, Danilova L, Favorov A, Fertig E, Bishop J, Khan Z, Flam E, Wysocki PT, DeJong P, Ando M, Liu C, Sakai A, Fukusumi T, Haft S, Sadat S, Califano JA. PMID: 30070359.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    46. Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma. Transl Res. 2018 12; 202:109-119. Kelley DZ, Flam EL, Guo T, Danilova LV, Zamuner FT, Bohrson C, Considine M, Windsor EJ, Bishop JA, Zhang C, Koch WM, Sidransky D, Westra WH, Chung CH, Califano JA, Wheelan S, Favorov AV, Florea L, Fertig EJ, Gaykalova DA. PMID: 30118659; PMCID: PMC6218276.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    47. Characterization of Alternative Splicing Events in HPV-Negative Head and Neck Squamous Cell Carcinoma Identifies an Oncogenic DOCK5 Variant. Clin Cancer Res. 2018 10 15; 24(20):5123-5132. Liu C, Guo T, Xu G, Sakai A, Ren S, Fukusumi T, Ando M, Sadat S, Saito Y, Khan Z, Fisch KM, Califano J. PMID: 29945995; PMCID: PMC6440699.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    48. HEY1 is expressed independent of NOTCH1 and is associated with poor prognosis in head and neck squamous cell carcinoma. Oral Oncol. 2018 07; 82:168-175. Rettig EM, Bishop JA, Agrawal N, Chung CH, Sharma R, Zamuner F, Li RJ, Koch WM, Califano JA, Guo T, Gaykalova DA, Fakhry C. PMID: 29909892.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    49. Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer. Bioinformatics. 2018 06 01; 34(11):1859-1867. Afsari B, Guo T, Considine M, Florea L, Kagohara LT, Stein-O'Brien GL, Kelley D, Flam E, Zambo KD, Ha PK, Geman D, Ochs MF, Califano JA, Gaykalova DA, Favorov AV, Fertig EJ. PMID: 29342249; PMCID: PMC5972655.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    50. NSD1- and NSD2-damaging mutations define a subset of laryngeal tumors with favorable prognosis. Nat Commun. 2017 11 24; 8(1):1772. Peri S, Izumchenko E, Schubert AD, Slifker MJ, Ruth K, Serebriiskii IG, Guo T, Burtness BA, Mehra R, Ross EA, Sidransky D, Golemis EA. PMID: 29176703; PMCID: PMC5701248.
      View in: PubMed   Mentions: 28     Fields:    Translation:Humans
    51. The NOTCH4-HEY1 Pathway Induces Epithelial-Mesenchymal Transition in Head and Neck Squamous Cell Carcinoma. Clin Cancer Res. 2018 02 01; 24(3):619-633. Fukusumi T, Guo TW, Sakai A, Ando M, Ren S, Haft S, Liu C, Amornphimoltham P, Gutkind JS, Califano JA. PMID: 29146722; PMCID: PMC6171749.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
    52. DNA methylation regulates TMEM16A/ANO1 expression through multiple CpG islands in head and neck squamous cell carcinoma. Sci Rep. 2017 11 09; 7(1):15173. Finegersh A, Kulich S, Guo T, Favorov AV, Fertig EJ, Danilova LV, Gaykalova DA, Califano JA, Duvvuri U. PMID: 29123240; PMCID: PMC5680248.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    53. Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks. Cancer Res. 2017 12 01; 77(23):6538-6550. Kelley DZ, Flam EL, Izumchenko E, Danilova LV, Wulf HA, Guo T, Singman DA, Afsari B, Skaist AM, Considine M, Welch JA, Stavrovskaya E, Bishop JA, Westra WH, Khan Z, Koch WM, Sidransky D, Wheelan SJ, Califano JA, Favorov AV, Fertig EJ, Gaykalova DA. PMID: 28947419; PMCID: PMC6029614.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    54. A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers. Cancer Res. 2017 10 01; 77(19):5248-5258. Guo T, Sakai A, Afsari B, Considine M, Danilova L, Favorov AV, Yegnasubramanian S, Kelley DZ, Flam E, Ha PK, Khan Z, Wheelan SJ, Gutkind JS, Fertig EJ, Gaykalova DA, Califano J. PMID: 28733453; PMCID: PMC6042297.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    55. PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF. Bioinformatics. 2017 Jun 15; 33(12):1892-1894. Stein-O'Brien GL, Carey JL, Lee WS, Considine M, Favorov AV, Flam E, Guo T, Li S, Marchionni L, Sherman T, Sivy S, Gaykalova DA, McKay RD, Ochs MF, Colantuoni C, Fertig EJ. PMID: 28174896; PMCID: PMC5860188.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    56. AHNS series: Do you know your guidelines? Management of head and neck cancer in the era of human papillomavirus: Educating our patients on human papillomavirus. Head Neck. 2017 05; 39(5):833-839. Guo T, Goldenberg D, Fakhry C. PMID: 28263449.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    57. Integrative computational analysis of transcriptional and epigenetic alterations implicates DTX1 as a putative tumor suppressor gene in HNSCC. Oncotarget. 2017 Feb 28; 8(9):15349-15363. Gaykalova DA, Zizkova V, Guo T, Tiscareno I, Wei Y, Vatapalli R, Hennessey PT, Ahn J, Danilova L, Khan Z, Bishop JA, Gutkind JS, Koch WM, Westra WH, Fertig EJ, Ochs MF, Califano JA. PMID: 28146432; PMCID: PMC5362490.
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    58. The potential impact of prophylactic human papillomavirus vaccination on oropharyngeal cancer. Cancer. 2016 08 01; 122(15):2313-23. Guo T, Eisele DW, Fakhry C. PMID: 27152637; PMCID: PMC4956510.
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    59. Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma. Int J Cancer. 2016 07 15; 139(2):373-82. Guo T, Gaykalova DA, Considine M, Wheelan S, Pallavajjala A, Bishop JA, Westra WH, Ideker T, Koch WM, Khan Z, Fertig EJ, Califano JA. PMID: 26949921; PMCID: PMC5579720.
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    60. Understanding the impact of survival and human papillomavirus tumor status on timing of recurrence in oropharyngeal squamous cell carcinoma. Oral Oncol. 2016 Jan; 52:97-103. Guo T, Rettig E, Fakhry C. PMID: 26589380; PMCID: PMC4691573.
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    61. Disease-free survival after salvage therapy for recurrent oropharyngeal squamous cell carcinoma. Head Neck. 2016 04; 38 Suppl 1:E1501-9. Joseph AW, Guo T, Hur K, Xie Y, Yin L, Califano JA, Ha PK, Quon H, Richmon JD, Eisele DW, Agrawal N, Fakhry C. PMID: 26558328.
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    62. Outlier Analysis Defines Zinc Finger Gene Family DNA Methylation in Tumors and Saliva of Head and Neck Cancer Patients. PLoS One. 2015; 10(11):e0142148. Gaykalova DA, Vatapalli R, Wei Y, Tsai HL, Wang H, Zhang C, Hennessey PT, Guo T, Tan M, Li R, Ahn J, Khan Z, Westra WH, Bishop JA, Zaboli D, Koch WM, Khan T, Ochs MF, Califano JA. PMID: 26544568; PMCID: PMC4636259.
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    63. Detection of somatic mutations and HPV in the saliva and plasma of patients with head and neck squamous cell carcinomas. Sci Transl Med. 2015 Jun 24; 7(293):293ra104. Wang Y, Springer S, Mulvey CL, Silliman N, Schaefer J, Sausen M, James N, Rettig EM, Guo T, Pickering CR, Bishop JA, Chung CH, Califano JA, Eisele DW, Fakhry C, Gourin CG, Ha PK, Kang H, Kiess A, Koch WM, Myers JN, Quon H, Richmon JD, Sidransky D, Tufano RP, Westra WH, Bettegowda C, Diaz LA, Papadopoulos N, Kinzler KW, Vogelstein B, Agrawal N. PMID: 26109104; PMCID: PMC4587492.
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    65. Surgical salvage improves overall survival for patients with HPV-positive and HPV-negative recurrent locoregional and distant metastatic oropharyngeal cancer. Cancer. 2015 Jun 15; 121(12):1977-84. Guo T, Qualliotine JR, Ha PK, Califano JA, Kim Y, Saunders JR, Blanco RG, D'Souza G, Zhang Z, Chung CH, Kiess A, Gourin CG, Koch W, Richmon JD, Agrawal N, Eisele DW, Fakhry C. PMID: 25782027; PMCID: PMC4457566.
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    66. Antagonistic cross-regulation between Sox9 and Sox10 controls an anti-tumorigenic program in melanoma. PLoS Genet. 2015 Jan; 11(1):e1004877. Shakhova O, Cheng P, Mishra PJ, Zingg D, Schaefer SM, Debbache J, Häusel J, Matter C, Guo T, Davis S, Meltzer P, Mihic-Probst D, Moch H, Wegner M, Merlino G, Levesque MP, Dummer R, Santoro R, Cinelli P, Sommer L. PMID: 25629959; PMCID: PMC4309598.
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    67. Utility of SPECT/CT for periparotid sentinel lymph node mapping in the surgical management of head and neck melanoma. Am J Otolaryngol. 2014 Jan-Feb; 35(1):12-8. Zender C, Guo T, Weng C, Faulhaber P, Rezaee R. PMID: 24140088.
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    68. Human papillomavirus-related carcinomas of the sinonasal tract. Am J Surg Pathol. 2013 Feb; 37(2):185-92. Bishop JA, Guo TW, Smith DF, Wang H, Ogawa T, Pai SI, Westra WH. PMID: 23095507; PMCID: PMC3545097.
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