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Farooq Azam
Title
Professor
School
University of California, San Diego
Department
Center for Marine Biotechnology and Biomedecine
Address
9500 Gilman Drive #0202
CA La Jolla 92093
Phone
858-534-6850
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Research
Research Activities and Funding
VIBRIO CHOLERAE PLANKTON COLONIZATION
NIH/NIAID
R01AI046600
Mar 1, 2000 - Feb 28, 2006
Role: Principal Investigator
Bibliographic
Publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can
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Timeline
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Paerl RW, Bouget FY, Lozano JC, Vergé V, Schatt P, Allen EE, Palenik B,
Azam F
. Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton. ISME J. 2017 Mar; 11(3):753-765. PMID: 27935586.
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PubMed
Jayarathne T, Sultana CM, Lee C, Malfatti F, Cox JL, Pendergraft MA, Moore KA,
Azam F
, Tivanski AV, Cappa CD, Bertram TH, Grassian VH, Prather KA, Stone EA. Enrichment of Saccharides and Divalent Cations in Sea Spray Aerosol During Two Phytoplankton Blooms. Environ Sci Technol. 2016 Nov 01; 50(21):11511-11520. PMID: 27709902.
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PubMed
Li J,
Azam F
, Zhang S. Outer membrane vesicles containing signalling molecules and active hydrolytic enzymes released by a coral pathogen Vibrio shilonii AK1. Environ Microbiol. 2016 Nov; 18(11):3850-3866. PMID: 27102379.
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PubMed
Mitulla M, Dinasquet J, Guillemette R, Simon M,
Azam F
, Wietz M. Response of bacterial communities from California coastal waters to alginate particles and an alginolytic Alteromonas macleodii strain. Environ Microbiol. 2016 Dec; 18(12):4369-4377. PMID: 27059936.
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PubMed
Lee C, Sultana CM, Collins DB, Santander MV, Axson JL, Malfatti F, Cornwell GC, Grandquist JR, Deane GB, Stokes MD,
Azam F
, Grassian VH, Prather KA. Advancing Model Systems for Fundamental Laboratory Studies of Sea Spray Aerosol Using the Microbial Loop. J Phys Chem A. 2015 Aug 20; 119(33):8860-70. PMID: 26196268.
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PubMed
Wang X, Sultana CM, Trueblood J, Hill TC, Malfatti F, Lee C, Laskina O, Moore KA, Beall CM, McCluskey CS, Cornwell GC, Zhou Y, Cox JL, Pendergraft MA, Santander MV, Bertram TH, Cappa CD,
Azam F
, DeMott PJ, Grassian VH, Prather KA. Microbial Control of Sea Spray Aerosol Composition: A Tale of Two Blooms. ACS Cent Sci. 2015 Jun 24; 1(3):124-31. PMID: 27162962; PMCID: PMC4827658.
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PubMed
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PubMed Central
Thompson A, Carter BJ, Turk-Kubo K, Malfatti F,
Azam F
, Zehr JP. Genetic diversity of the unicellular nitrogen-fixing cyanobacteria UCYN-A and its prymnesiophyte host. Environ Microbiol. 2014 Oct; 16(10):3238-49. PMID: 24761991.
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PubMed
Pedler BE, Aluwihare LI,
Azam F
. Single bacterial strain capable of significant contribution to carbon cycling in the surface ocean. Proc Natl Acad Sci U S A. 2014 May 20; 111(20):7202-7. PMID: 24733921; PMCID: PMC4034236.
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PubMed Central
Guasco TL, Cuadra-Rodriguez LA, Pedler BE, Ault AP, Collins DB, Zhao D, Kim MJ, Ruppel MJ, Wilson SC, Pomeroy RS, Grassian VH,
Azam F
, Bertram TH, Prather KA. Transition metal associations with primary biological particles in sea spray aerosol generated in a wave channel. Environ Sci Technol. 2014 Jan 21; 48(2):1324-33. PMID: 24328130.
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PubMed
Prather KA, Bertram TH, Grassian VH, Deane GB, Stokes MD, Demott PJ, Aluwihare LI, Palenik BP,
Azam F
, Seinfeld JH, Moffet RC, Molina MJ, Cappa CD, Geiger FM, Roberts GC, Russell LM, Ault AP, Baltrusaitis J, Collins DB, Corrigan CE, Cuadra-Rodriguez LA, Ebben CJ, Forestieri SD, Guasco TL, Hersey SP, Kim MJ, Lambert WF, Modini RL, Mui W, Pedler BE, Ruppel MJ, Ryder OS, Schoepp NG, Sullivan RC, Zhao D. Bringing the ocean into the laboratory to probe the chemical complexity of sea spray aerosol. Proc Natl Acad Sci U S A. 2013 May 07; 110(19):7550-5. PMID: 23620519; PMCID: PMC3651460.
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PubMed
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PubMed Central
Lander GC, Baudoux AC,
Azam F
, Potter CS, Carragher B, Johnson JE. Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM. Structure. 2012 Mar 07; 20(3):498-503. PMID: 22405008; PMCID: PMC3302160.
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PubMed
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PubMed Central
Baudoux AC, Hendrix RW, Lander GC, Bailly X, Podell S, Paillard C, Johnson JE, Potter CS, Carragher B,
Azam F
. Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses. Environ Microbiol. 2012 Aug; 14(8):2071-86. PMID: 22225728; PMCID: PMC3338904.
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PubMed
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PubMed Central
Garren M,
Azam F
. Corals shed bacteria as a potential mechanism of resilience to organic matter enrichment. ISME J. 2012 Jun; 6(6):1159-65. PMID: 22189494; PMCID: PMC3358026.
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PubMed
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PubMed Central
Garren M,
Azam F
. New directions in coral reef microbial ecology. Environ Microbiol. 2012 Apr; 14(4):833-44. PMID: 21955796.
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PubMed
Eloe EA, Malfatti F, Gutierrez J, Hardy K, Schmidt WE, Pogliano K, Pogliano J,
Azam F
, Bartlett DH. Isolation and characterization of a psychropiezophilic alphaproteobacterium. Appl Environ Microbiol. 2011 Nov; 77(22):8145-53. PMID: 21948832; PMCID: PMC3208983.
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PubMed
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PubMed Central
Beardsley C, Moss S, Malfatti F,
Azam F
. Quantitative role of shrimp fecal bacteria in organic matter fluxes in a recirculating shrimp aquaculture system. FEMS Microbiol Ecol. 2011 Jul; 77(1):134-45. PMID: 21426366.
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PubMed
Garren M,
Azam F
. New method for counting bacteria associated with coral mucus. Appl Environ Microbiol. 2010 Sep; 76(18):6128-33. PMID: 20656857; PMCID: PMC2937480.
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PubMed
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PubMed Central
Jiao N, Herndl GJ, Hansell DA, Benner R, Kattner G, Wilhelm SW, Kirchman DL, Weinbauer MG, Luo T, Chen F,
Azam F
. Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean. Nat Rev Microbiol. 2010 Aug; 8(8):593-9. PMID: 20601964.
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PubMed
Smriga S, Sandin SA,
Azam F
. Abundance, diversity, and activity of microbial assemblages associated with coral reef fish guts and feces. FEMS Microbiol Ecol. 2010 Jul 01; 73(1):31-42. PMID: 20455942.
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PubMed
Malfatti F, Samo TJ,
Azam F
. High-resolution imaging of pelagic bacteria by Atomic Force Microscopy and implications for carbon cycling. ISME J. 2010 Mar; 4(3):427-39. PMID: 19940866.
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PubMed
Garren M, Raymundo L, Guest J, Harvell CD,
Azam F
. Resilience of coral-associated bacterial communities exposed to fish farm effluent. PLoS One. 2009 Oct 06; 4(10):e7319. PMID: 19806190; PMCID: PMC2751826.
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PubMed
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PubMed Central
Manganelli M, Malfatti F, Samo TJ, Mitchell BG, Wang H,
Azam F
. Major role of microbes in carbon fluxes during Austral winter in the Southern Drake Passage. PLoS One. 2009 Sep 14; 4(9):e6941. PMID: 19759822; PMCID: PMC2736376.
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PubMed
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PubMed Central
Rypien KL, Ward JR,
Azam F
. Antagonistic interactions among coral-associated bacteria. Environ Microbiol. 2010 Jan; 12(1):28-39. PMID: 19691500.
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PubMed
Mayali X, Franks PJ, Tanaka Y,
Azam F
. BACTERIA-INDUCED MOTILITY REDUCTION IN LINGULODINIUM POLYEDRUM (DINOPHYCEAE)(1). J Phycol. 2008 Aug; 44(4):923-8. PMID: 27041610.
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PubMed
Garren M, Smriga S,
Azam F
. Gradients of coastal fish farm effluents and their effect on coral reef microbes. Environ Microbiol. 2008 Sep; 10(9):2299-312. PMID: 18557772.
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PubMed
Mayali X, Franks PJ,
Azam F
. Cultivation and ecosystem role of a marine roseobacter clade-affiliated cluster bacterium. Appl Environ Microbiol. 2008 May; 74(9):2595-603. PMID: 18326670; PMCID: PMC2394886.
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PubMed
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PubMed Central
Dinsdale EA, Pantos O, Smriga S, Edwards RA, Angly F, Wegley L, Hatay M, Hall D, Brown E, Haynes M, Krause L, Sala E, Sandin SA, Thurber RV, Willis BL,
Azam F
, Knowlton N, Rohwer F. Microbial ecology of four coral atolls in the Northern Line Islands. PLoS One. 2008 Feb 27; 3(2):e1584. PMID: 18301735; PMCID: PMC2253183.
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PubMed
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PubMed Central
Azam F
, Malfatti F. Microbial structuring of marine ecosystems. Nat Rev Microbiol. 2007 Oct; 5(10):782-91. PMID: 17853906.
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PubMed
Mueller RS, McDougald D, Cusumano D, Sodhi N, Kjelleberg S,
Azam F
, Bartlett DH. Vibrio cholerae strains possess multiple strategies for abiotic and biotic surface colonization. J Bacteriol. 2007 Jul; 189(14):5348-60. PMID: 17496082; PMCID: PMC1951843.
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PubMed
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PubMed Central
Not F, Gausling R,
Azam F
, Heidelberg JF, Worden AZ. Vertical distribution of picoeukaryotic diversity in the Sargasso Sea. Environ Microbiol. 2007 May; 9(5):1233-52. PMID: 17472637.
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PubMed
Hamasaki K, Taniguchi A, Tada Y, Long RA,
Azam F
. Actively growing bacteria in the inland sea of Japan, identified by combined bromodeoxyuridine immunocapture and denaturing gradient gel electrophoresis. Appl Environ Microbiol. 2007 May; 73(9):2787-98. PMID: 17337555; PMCID: PMC1892868.
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PubMed
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PubMed Central
Casas V, Miyake J, Balsley H, Roark J, Telles S, Leeds S, Zurita I, Breitbart M, Bartlett D,
Azam F
, Rohwer F. Widespread occurrence of phage-encoded exotoxin genes in terrestrial and aquatic environments in Southern California. FEMS Microbiol Lett. 2006 Aug; 261(1):141-9. PMID: 16842371.
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PubMed
Worden AZ, Seidel M, Smriga S, Wick A, Malfatti F, Bartlett D,
Azam F
. Trophic regulation of Vibrio cholerae in coastal marine waters. Environ Microbiol. 2006 Jan; 8(1):21-9. PMID: 16343318.
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PubMed
Bartlett DH,
Azam F
. Microbiology. Chitin, cholera, and competence. Science. 2005 Dec 16; 310(5755):1775-7. PMID: 16357249.
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PubMed
Long RA, Rowley DC, Zamora E, Liu J, Bartlett DH,
Azam F
. Antagonistic interactions among marine bacteria impede the proliferation of Vibrio cholerae. Appl Environ Microbiol. 2005 Dec; 71(12):8531-6. PMID: 16332844; PMCID: PMC1317384.
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PubMed
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PubMed Central
Purdy A, Rohwer F, Edwards R,
Azam F
, Bartlett DH. A glimpse into the expanded genome content of Vibrio cholerae through identification of genes present in environmental strains. J Bacteriol. 2005 May; 187(9):2992-3001. PMID: 15838025; PMCID: PMC1082809.
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PubMed Central
Azam F
, Worden AZ. Oceanography. Microbes, molecules, and marine ecosystems. Science. 2004 Mar 12; 303(5664):1622-4. PMID: 15016987.
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PubMed
Mayali X,
Azam F
. Algicidal bacteria in the sea and their impact on algal blooms. J Eukaryot Microbiol. 2004 Mar-Apr; 51(2):139-44. PMID: 15134248.
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PubMed
Mouriño-Pérez RR, Worden AZ,
Azam F
. Growth of Vibrio cholerae O1 in red tide waters off California. Appl Environ Microbiol. 2003 Nov; 69(11):6923-31. PMID: 14602656; PMCID: PMC262290.
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PubMed
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PubMed Central
Long RA, Qureshi A, Faulkner DJ,
Azam F
. 2-n-Pentyl-4-quinolinol produced by a marine Alteromonas sp. and its potential ecological and biogeochemical roles. Appl Environ Microbiol. 2003 Jan; 69(1):568-76. PMID: 12514043; PMCID: PMC152395.
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PubMed Central
Bidle KD, Manganelli M,
Azam F
. Regulation of oceanic silicon and carbon preservation by temperature control on bacteria. Science. 2002 Dec 06; 298(5600):1980-4. PMID: 12471255.
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PubMed
Riemann L,
Azam F
. Widespread N-acetyl-D-glucosamine uptake among pelagic marine bacteria and its ecological implications. Appl Environ Microbiol. 2002 Nov; 68(11):5554-62. PMID: 12406749; PMCID: PMC129920.
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Breitbart M, Salamon P, Andresen B, Mahaffy JM, Segall AM, Mead D,
Azam F
, Rohwer F. Genomic analysis of uncultured marine viral communities. Proc Natl Acad Sci U S A. 2002 Oct 29; 99(22):14250-5. PMID: 12384570; PMCID: PMC137870.
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PubMed Central
Fuchs E, Jaffe J, Long R,
Azam F
. Thin laser light sheet microscope for microbial oceanography. Opt Express. 2002 Jan 28; 10(2):145-54. PMID: 19424342.
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PubMed
Long RA,
Azam F
. Antagonistic interactions among marine pelagic bacteria. Appl Environ Microbiol. 2001 Nov; 67(11):4975-83. PMID: 11679315; PMCID: PMC93260.
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Grossart HP, Steward GF, Martinez J,
Azam F
. A simple, rapid method for demonstrating bacterial flagella. Appl Environ Microbiol. 2000 Aug; 66(8):3632-6. PMID: 10919832; PMCID: PMC92196.
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Rohwer F,
Azam F
. Detection of DNA damage in prokaryotes by terminal deoxyribonucleotide transferase-mediated dUTP nick end labeling. Appl Environ Microbiol. 2000 Mar; 66(3):1001-6. PMID: 10698764; PMCID: PMC91935.
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PubMed
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PubMed Central
Riemann L, Steward GF,
Azam F
. Dynamics of bacterial community composition and activity during a mesocosm diatom bloom. Appl Environ Microbiol. 2000 Feb; 66(2):578-87. PMID: 10653721; PMCID: PMC91866.
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Azam F
, Fonda Umani S, Funari E. Significance of bacteria in the mucilage phenomenon in the northern Adriatic Sea. Ann Ist Super Sanita. 1999; 35(3):411-9. PMID: 10721207.
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PubMed
Azam F
, Smith DC, Steward GF, Hagström A. Bacteria-organic matter coupling and its significance for oceanic carbon cycling. Microb Ecol. 1994 Sep; 28(2):167-79. PMID: 24186443.
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PubMed
Martinez J,
Azam F
. Aminopeptidase activity in marine chroococcoid cyanobacteria. Appl Environ Microbiol. 1993 Nov; 59(11):3701-7. PMID: 16349084.
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PubMed
Ammerman JW,
Azam F
. Characteristics of Cyclic AMP Transport by Marine Bacteria. Appl Environ Microbiol. 1987 Dec; 53(12):2963-6. PMID: 16347511.
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PubMed
Ammerman JW,
Azam F
. Uptake of Cyclic AMP by Natural Populations of Marine Bacteria. Appl Environ Microbiol. 1982 Apr; 43(4):869-76. PMID: 16345995.
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PubMed
Fuhrman JA,
Azam F
. Bacterioplankton secondary production estimates for coastal waters of british columbia, antarctica, and california. Appl Environ Microbiol. 1980 Jun; 39(6):1085-95. PMID: 16345577.
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PubMed
Azam F
. Silicic-acid uptake in diatoms studied with [(68)Ge]germanic acid as tracer. Planta. 1974 Jan; 121(3):205-12. PMID: 24442800.
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View timeline visualization
Year
Publications
1980
1
1982
1
1987
1
1993
1
1994
1
1999
1
2000
3
2001
1
2002
4
2003
2
2004
2
2005
3
2006
2
2007
4
2008
4
2009
4
2010
3
2011
4
2012
2
2013
2
2014
2
2015
2
2016
4
Farooq's Networks
Concepts
Derived automatically from this person's publications.
Anthozoa
Water Microbiology
Ecosystem
Seawater
Bacteria
See all (219) concept(s)
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Co-Authors
People in Profiles who have published with this person.
Grassian, Vicki
Franks, Peter
Palenik, Brian
Prather, Kimberly
Bartlett, Douglas
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