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Elizabeth Kiernan

Title(s)Clin Res Crd Asst, Pediatrics
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    The Role of TLR4 signaling and histone modifications in neonatal microglial priming by chronic intermittent hypoxia
    NIH F31NS100229Jul 1, 2017 - Jun 30, 2020
    Role: Principal Investigator

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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Warp analysis research pipelines: cloud-optimized workflows for biological data processing and reproducible analysis. Bioinformatics. 2025 Oct 02; 41(10). Degatano K, Awdeh A, Cox RS, Dingman W, Grant G, Khajouei F, Kiernan E, Konwar K, Mathews KL, Palis K, Petrillo N, Van der Auwera G, Wang CR, Way J. PMID: 40924537; PMCID: PMC12490826.
      View in: PubMed   Mentions: 1     Fields:    
    2. Molecular Phenotyping of Sepsis and Differential Response to Fluid Resuscitation. Am J Respir Crit Care Med. 2025 Sep; 211(9):1681-1688. Kiernan E, Zelnick LR, Khader A, Coston TD, Bailey ZA, Speckmaier S, Lo JJ, Siew ED, Sathe NA, Kestenbaum BR, Himmelfarb J, Johnson NJ, Shapiro NI, Douglas IS, Hough CL, Bhatraju PK. PMID: 40668865; PMCID: PMC12432439.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    3. Diabetes knowledge, risk and severity perceptions, lifestyle behaviours and management barriers among Sub-Saharan African immigrants living in the UK: an ethnographic study. BMC Public Health. 2025 Aug 22; 25(1):2883. Onuorah L, Santy-Tomlinson J, Draper P. PMID: 40846934; PMCID: PMC12372270.
      View in: PubMed   Mentions:    Fields:    
    4. Graduate Students' Perspectives on Obtaining a Master's of Science in Respiratory Care. Respir Care. 2025 04; 70(4):384-392. Koster MS, McHenry KL, Caldwell-Chadwick BG, Null MM. PMID: 40193534.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    5. Comparative risk of QTc prolongation induced by second-generation antipsychotics in the real world: retrospective cohort study based on a hospital information system. BJPsych Open. 2025 Mar 10; 11(2):e42. He L, Yu W, Song H, Li L, Shen Y, Zhang L, Li H. PMID: 40059385; PMCID: PMC12001931.
      View in: PubMed   Mentions:
    6. A machine learning decision support tool optimizes WGS utilization in a neonatal intensive care unit. NPJ Digit Med. 2025 Jan 30; 8(1):72. Juarez EF, Peterson B, Sanford Kobayashi E, Gilmer S, Tobin LE, Schultz B, Lenberg J, Carroll J, Bai-Tong S, Sweeney NM, Beebe C, Stewart L, Olsen L, Reinke J, Kiernan EA, Reimers R, Wigby K, Tackaberry C, Yandell M, Hobbs C, Bainbridge MN. PMID: 39885315; PMCID: PMC11782664.
      View in: PubMed   Mentions: 1  
    7. A Machine Learning Decision Support Tool Optimizes Whole Genome Sequencing Utilization in a Neonatal Intensive Care Unit. medRxiv. 2024 Jul 07. Juarez EF, Peterson B, Kobayashi ES, Gilmer S, Tobin LE, Schultz B, Lenberg J, Carroll J, Bai-Tong S, Sweeney NM, Beebe C, Stewart L, Olsen L, Reinke J, Kiernan EA, Reimers R, Wigby K, Tackaberry C, Yandell M, Hobbs C, Bainbridge MN. PMID: 39006422; PMCID: PMC11245077.
      View in: PubMed   Mentions:
    8. Molecular Phenotyping of Patients with Sepsis and Kidney Injury and Differential Response to Fluid Resuscitation. Res Sq. 2024 Jul 02. Kiernan E, Zelnick LR, Khader A, Coston TD, Bailey ZA, Speckmaier S, Lo J, Sathe N, Kestenbaum BR, Himmelfarb J, Johnson N, Shapiro N, Douglas IS, Hough C, Bhatraju P. PMID: 39011119; PMCID: PMC11247924.
      View in: PubMed   Mentions:
    9. Association of Lower Rostral Anterior Cingulate GABA+ and Dysregulated Cortisol Stress Response With Altered Functional Connectivity in Young Adults With Lifetime Depression: A Multimodal Imaging Investigation of Trait and State Effects. Am J Psychiatry. 2024 Jul 01; 181(7):639-650. Ironside M, Duda JM, Moser AD, Holsen LM, Zuo CS, Du F, Perlo S, Richards CE, Chen X, Chen X, Nickerson LD, Null KE, Esfand SM, Alexander MM, Crowley DJ, Lauze M, Misra M, Goldstein JM, Pizzagalli DA. PMID: 38685857; PMCID: PMC11216878.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    10. [Determination of trace anions in battery-grade lithium carbonate by double-inhibition on-line matrix-removal ion chromatography]. Se Pu. 2024 Mar 08; 42(3):291-295. Wu G, Wu G, Wu GQ. PMID: 38503706; PMCID: PMC10951807.
      View in: PubMed   Mentions:    Fields:    
    11. Challenges to Informed, Patient-Centered, and Shared Decision Making for Treatment of Kidney Failure in Older Adults. Am J Kidney Dis. 2024 05; 83(5):561-563. Kiernan E, Wong SPY. PMID: 38206253.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    12. Urinary Biomarkers and Kidney Injury in VA NEPHRON-D: Phenotyping Acute Kidney Injury in Clinical Trials. Am J Kidney Dis. 2024 02; 83(2):151-161. Kiernan EA, Hu D, Philbrook HT, Ix JH, Bonventre JV, Coca SG, Moledina DG, Fried LF, Shlipak MG, Parikh CR. PMID: 37726051; PMCID: PMC10841767.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    13. A guide to the BRAIN Initiative Cell Census Network data ecosystem. PLoS Biol. 2023 06; 21(6):e3002133. Hawrylycz M, Martone ME, Ascoli GA, Bjaalie JG, Dong HW, Ghosh SS, Gillis J, Hertzano R, Haynor DR, Hof PR, Kim Y, Lein E, Liu Y, Miller JA, Mitra PP, Mukamel E, Ng L, Osumi-Sutherland D, Peng H, Ray PL, Sanchez R, Regev A, Ropelewski A, Scheuermann RH, Tan SZK, Thompson CL, Tickle T, Tilgner H, Varghese M, Wester B, White O, Zeng H, Aevermann B, Allemang D, Ament S, Athey TL, Baker C, Baker KS, Baker PM, Bandrowski A, Banerjee S, Bishwakarma P, Carr A, Chen M, Choudhury R, Cool J, Creasy H, D'Orazi F, Degatano K, Dichter B, Ding SL, Dolbeare T, Ecker JR, Fang R, Fillion-Robin JC, Fliss TP, Gee J, Gillespie T, Gouwens N, Zhang GQ, Halchenko YO, Harris NL, Herb BR, Hintiryan H, Hood G, Horvath S, Huo B, Jarecka D, Jiang S, Khajouei F, Kiernan EA, Kir H, Kruse L, Lee C, Lelieveldt B, Li Y, Liu H, Liu L, Markuhar A, Mathews J, Mathews KL, Mezias C, Miller MI, Mollenkopf T, Mufti S, Mungall CJ, Orvis J, Puchades MA, Qu L, Receveur JP, Ren B, Sjoquist N, Staats B, Tward D, van Velthoven CTJ, Wang Q, Xie F, Xu H, Yao Z, Yun Z, Zhang YR, Zheng WJ, Zingg B. PMID: 37390046; PMCID: PMC10313015.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansAnimalsCells
    14. Alterations in the Circulating Proteome Associated with Albuminuria. J Am Soc Nephrol. 2023 06 01; 34(6):1078-1089. Kiernan E, Surapaneni A, Zhou L, Schlosser P, Walker KA, Rhee EP, Ballantyne CM, Deo R, Dubin RF, Ganz P, Coresh J, Grams ME. PMID: 36890639; PMCID: PMC10278823.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    15. Adverse Perinatal Outcomes and Postpartum Suicidal Behavior in California, 2013-2018. J Womens Health (Larchmt). 2023 05; 32(5):608-615. Delker E, Marienfeld C, Baer RJ, Parry B, Kiernan E, Jelliffe-Pawlowski L, Chambers C, Bandoli G. PMID: 36867753; PMCID: PMC10171948.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    16. Porcine reproductive and respiratory syndrome virus degrades DDX10 via SQSTM1/p62-dependent selective autophagy to antagonize its antiviral activity. Autophagy. 2023 08; 19(8):2257-2274. Li J, Li J, Zhou Y, Zhao W, Zhao W, Liu J, Liu J, Ullah R, Fang P, Fang L, Xiao S. PMID: 36779599; PMCID: PMC10351467.
      View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
    17. Reclassification of the Etiology of Infant Mortality With Whole-Genome Sequencing. JAMA Netw Open. 2023 02 01; 6(2):e2254069. Owen MJ, Wright MS, Batalov S, Kwon Y, Ding Y, Chau KK, Chowdhury S, Sweeney NM, Kiernan E, Richardson A, Batton E, Baer RJ, Bandoli G, Gleeson JG, Bainbridge M, Chambers CD, Kingsmore SF. PMID: 36757698; PMCID: PMC9912130.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    18. The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain. Nucleic Acids Res. 2023 01 06; 51(D1):D1075-D1085. Ament SA, Adkins RS, Carter R, Chrysostomou E, Colantuoni C, Crabtree J, Creasy HH, Degatano K, Felix V, Gandt P, Garden GA, Giglio M, Herb BR, Khajouei F, Kiernan E, McCracken C, McDaniel K, Nadendla S, Nickel L, Olley D, Orvis J, Receveur JP, Schor M, Sonthalia S, Tickle TL, Way J, Hertzano R, Mahurkar AA, White OR. PMID: 36318260; PMCID: PMC9825473.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    19. [Simultaneous determination of 28 fragrance components in cosmetics by gas chromatography-tandem mass spectrometry]. Se Pu. 2023 Jan; 41(1):76-86. Xu D, Wu Y, Wu Y, Wang Y, Chen F, Chen F, Zhang S, Lai G. PMID: 36633079; PMCID: PMC9841437.
      View in: PubMed   Mentions: 1     Fields:    
    20. [Determination of organophosphate diesters in facility vegetable soils using ultra-high performance liquid chromatography-electrostatic field orbitrap high resolution mass spectrometry]. Se Pu. 2023 Jan; 41(1):58-65. Liu M, Wang M, Zhao A, Zhao A, Zhu L, Wang C, Wei C, Liu W, Liu W, Xu J. PMID: 36633077; PMCID: PMC9837671.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    21. DBI/ACBP is a targetable autophagy checkpoint involved in aging and cardiovascular disease. Autophagy. 2023 07; 19(7):2166-2169. Montégut L, Joseph A, Chen H, Chen H, Abdellatif M, Ruckenstuhl C, Martins I, Madeo F, Kroemer G. PMID: 36579946; PMCID: PMC10283417.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    22. Author Correction: Polycomb CBX7 has a unifying role in cellular lifespan. Nat Cell Biol. 2022 Sep; 24(9):1445. Gil J, Bernard D, Martínez D, Beach D. PMID: 35941232.
      View in: PubMed   Mentions: 1     Fields:    
    23. [Plasma metabolomics in a deep vein thrombosis rat model based on ultra-high performance liquid chromatography-electrostatic field orbitrap high resolution mass spectrometry]. Se Pu. 2022 Aug; 40(8):736-745. Gu Y, Zang P, Li J, Li J, Yan Y, Wang J. PMID: 35903841; PMCID: PMC9404070.
      View in: PubMed   Mentions: 6     Fields:    Translation:Animals
    24. Autophagy and its mediated mitochondrial quality control maintain pollen tube growth and male fertility in Arabidopsis. Autophagy. 2023 03; 19(3):768-783. Yan H, Zhuang M, Xu X, Li S, Li S, Yang M, Li N, Du X, Hu K, Peng X, Huang W, Wu H, Wu H, Tse YC, Zhao L, Wang H. PMID: 35786359; PMCID: PMC9980518.
      View in: PubMed   Mentions: 17     Fields:    Translation:AnimalsCells
    25. Maternal, infant, and environmental risk factors for sudden unexpected infant deaths: results from a large, administrative cohort. J Matern Fetal Neonatal Med. 2022 Dec; 35(25):8998-9005. Bandoli G, Baer RJ, Owen M, Kiernan E, Jelliffe-Pawlowski L, Kingsmore S, Chambers CD. PMID: 34852708; PMCID: PMC9310558.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    26. Risk factors for neonatal encephalopathy in late preterm and term singleton births in a large California birth cohort. J Perinatol. 2022 03; 42(3):341-347. Bandoli G, Suttner D, Kiernan E, Baer RJ, Jelliffe-Pawlowski L, Chambers CD. PMID: 34702969; PMCID: PMC8917979.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    27. Uniform criteria for total hip replacement surgery in patients with hip osteoarthritis: a decision tool to guide treatment decisions. Int J Qual Health Care. 2021 Mar 04; 33(1). Atsma F, Molenkamp O, Bouma H, Bolder SB, Groenewoud AS, Westert GP. PMID: 33616656; PMCID: PMC7941208.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    28. Pregnancy outcomes following maternal treatment with rituximab prior to or during pregnancy: a case series. Rheumatol Adv Pract. 2021; 5(1):rkaa074. Perrotta K, Kiernan E, Bandoli G, Manaster R, Chambers C. PMID: 33521513; PMCID: PMC7819866.
      View in: PubMed   Mentions: 19  
    29. Prior Hypoxia Exposure Enhances Murine Microglial Inflammatory Gene Expression in vitro Without Concomitant H3K4me3 Enrichment. Front Cell Neurosci. 2020; 14:535549. Kiernan EA, Ewald AC, Ouellette JN, Wang T, Agbeh A, Knutson AO, Roopra AS, Watters JJ. PMID: 33132843; PMCID: PMC7575929.
      View in: PubMed   Mentions: 4  
    30. Injury, Illness, and Mental Health Risks in United States Domestic Mariners. J Occup Environ Med. 2020 10; 62(10):839-841. Lefkowitz RY, Null DB, Slade MD, Redlich CA. PMID: 32769797.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    31. Sex- and Region-Specific Differences in the Transcriptomes of Rat Microglia from the Brainstem and Cervical Spinal Cord. J Pharmacol Exp Ther. 2020 10; 375(1):210-222. Ewald AC, Kiernan EA, Roopra AS, Radcliff AB, Timko RR, Baker TL, Watters JJ. PMID: 32661056; PMCID: PMC7569313.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    32. Imaging examination, diagnosis, and control and prevention of nosocomial infection for coronavirus disease 2019: Expert consensus of Hunan radiologist. Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2020 Mar 28; 45(3):221-228. Liu J, Liu J, Liu J, Wang W. PMID: 32386011.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCellsPHPublic Health
    33. Development of central respiratory control in anurans: The role of neurochemicals in the emergence of air-breathing and the hypoxic response. Respir Physiol Neurobiol. 2019 12; 270:103266. Janes TA, Rousseau JP, Fournier S, Kiernan EA, Harris MB, Taylor BE, Kinkead R. PMID: 31408738; PMCID: PMC7476778.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    34. Caspase-1 Activation Is Related With HIV-Associated Atherosclerosis in an HIV Transgenic Mouse Model and HIV Patient Cohort. Arterioscler Thromb Vasc Biol. 2019 09; 39(9):1762-1775. Kearns AC, Liu F, Dai S, Robinson JA, Kiernan E, Tesfaye Cheru L, Peng X, Gordon J, Morgello S, Abuova A, Lo J, Zanni MV, Grinspoon SK, Burdo TH, Qin ??? X. PMID: 31315440; PMCID: PMC6703939.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    35. Neonatal Intermittent Hypoxia Induces Lasting Sex-Specific Augmentation of Rat Microglial Cytokine Expression. Front Immunol. 2019; 10:1479. Kiernan EA, Wang T, Vanderplow AM, Cherukuri S, Cahill ME, Watters JJ. PMID: 31333645; PMCID: PMC6615134.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    36. Medications that Cause Fetal Anomalies and Possible Prevention Strategies. Clin Perinatol. 2019 06; 46(2):203-213. Kiernan E, Jones KL. PMID: 31010556.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    37. Approach to evaluating pregnancy safety of anti-rheumatic medications in the OTIS MotherToBaby pregnancy studies: what have we learned? Rheumatology (Oxford). 2018 07 01; 57(suppl_5):v34-v39. Chambers C, Johnson DL, Kiernan E. PMID: 30137588; PMCID: PMC6099128.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansPHPublic Health
    38. The prevention, screening and treatment of congenital heart block from neonatal lupus: a survey of provider practices. Rheumatology (Oxford). 2018 07 01; 57(suppl_5):v9-v17. Clowse MEB, Eudy AM, Kiernan E, Williams MR, Bermas B, Chakravarty E, Sammaritano LR, Chambers CD, Buyon J. PMID: 30137589; PMCID: PMC6099126.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    39. Patient-Reported Health-Related Quality-of-Life Assessment at the Point-of-Care with Adolescents and Young Adults with Cancer. J Adolesc Young Adult Oncol. 2018 02; 7(1):97-102. Henderson JR, Kiernan E, McNeer JL, Rodday AM, Spencer K, Henderson TO, Parsons SK. PMID: 29190179.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    40. Mechanisms of microglial activation in models of inflammation and hypoxia: Implications for chronic intermittent hypoxia. J Physiol. 2016 Mar 15; 594(6):1563-77. Kiernan EA, Smith SM, Mitchell GS, Watters JJ. PMID: 26890698; PMCID: PMC4799985.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansAnimalsCells
    41. Blue Light Modulates Murine Microglial Gene Expression in the Absence of Optogenetic Protein Expression. Sci Rep. 2016 Feb 17; 6:21172. Cheng KP, Kiernan EA, Eliceiri KW, Williams JC, Watters JJ. PMID: 26883795; PMCID: PMC4756664.
      View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
    42. Is the Adolescent and Young Adult Cancer Survivor at Risk for Late Effects? It Depends on Where You Look. J Adolesc Young Adult Oncol. 2016 06; 5(2):159-73. Barthel EM, Spencer K, Banco D, Kiernan E, Parsons S. PMID: 26885683.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    43. B cell signatures of BCWD-resistant and susceptible lines of rainbow trout: a shift towards more EBF-expressing progenitors and fewer mature B cells in resistant animals. Dev Comp Immunol. 2015 Jan; 48(1):1-12. Zwollo P, Ray JC, Sestito M, Kiernan E, Wiens GD, Kaattari S, StJacques B, Epp L. PMID: 25101978.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    44. An evaluation of California's Adolescent Sibling Pregnancy Prevention Program. Perspect Sex Reprod Health. 2003 Mar-Apr; 35(2):62-70. East P, Kiernan E, Chávez G. PMID: 12729135; PMCID: PMC3791863.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansPHPublic Health
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