Samuel Park

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Title(s)	CLIN APPLICATIONS PROFL 4, Student Health & Wellbeing
School	Vc-health Sciences-schools
Address	9500 Gilman Drive # La Jolla CA 92093
vCard	Download vCard

Bibliographic

publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

Altmetrics Details

PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

Comprehensive RNA-binding protein analyses and deep learning uncover genetic constraints and disease associations in protein-RNA interfaces. Cell Syst. 2026 Jun 17; 17(6):101588. Her HL, Yee BA, Xu S, Boyle EA, Rothamel KL, Zhao ZZ, Blue SM, Mueller JR, Park SS, Nguyen GG, Naritomi JT, Klie A, Wei X, Olson S, Zhan L, Aigner S, Graveley BR, Yeo GW. PMID: 42025161.

View in: PubMed Mentions: Fields:
Cel Cell Biology Com Computational Biology Mol Molecular Biology
Translation:Humans Cells
The impact of K-Ras Gly12 mutants on homeostasis and tumorigenesis in the colonic epithelium. Oncogene. 2026 May; 45(19):1828-1839. Yang MH, Sheth S, Shui B, Grabski IN, Park SS, Cobo A, Irizarri R, Heymach JV, Dow LE, Haigis KM. PMID: 41963618; PMCID: PMC13139037.

View in: PubMed Mentions: Fields:
Mol Molecular Biology Neo Neoplasms
Translation:Humans Animals
Evaluation of novel computational methods to identify RNA-binding protein footprints from structural data. RNA. 2025 07 16; 31(8):1103-1124. Mizrahi O, Corley M, Feldman O, Fröhlking T, Sun L, Ziesel A, Antczak M, Bernetti M, Elhajjajy SI, Huang W, Nguyen GG, Park SS, Perez Martell RI, Trinity L, Xu K, Zok T, Bussi G, Jabbari H, Orenstein Y, Aviran S, Meyer MM, Yeo GW. PMID: 40399037; PMCID: PMC12265944.

View in: PubMed Mentions: 1 Fields:
Mol Molecular Biology
Translation:Humans Cells
Genome-Wide Interrogation of SARS-CoV-2 RNA-Protein Interactions Uncovers Hidden Regulatory Sites. bioRxiv. 2025 May 28. Xiang JS, Zhao KX, Tadri L, Tamaru K, Yee BA, Rothamel K, Schmok JC, Mueller JR, Park SS, Madrigal AA, McVicar RN, Kwong EM, Croker BA, Clark AE, Carlin AF, Acevedo C, McCole D, O'Leary SE, Hai R, Leibel SL, Yeo GW. PMID: 40501555; PMCID: PMC12154810.

View in: PubMed Mentions:
circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA. Elife. 2024 Jul 23; 13. Okholm TLH, Kamstrup AB, Nielsen MM, Hollensen AK, Graversgaard ML, Sørensen MH, Kristensen LS, Vang S, Park SS, Yeo E, Dyrskjøt L, Kjems J, Pedersen JS, Damgaard CK. PMID: 39041323; PMCID: PMC11265796.

View in: PubMed Mentions: 6 Fields:
Bio Biology
Translation:Humans Cells
circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA. bioRxiv. 2024 Jun 03. Okholm TLH, Kamstrup AB, Nielsen MM, Hollensen AK, Graversgaard ML, Sørensen MH, Kristensen LS, Vang S, Park SS, Yeo GW, Dyrskjøt L, Kjems J, Pedersen JS, Damgaard CK. PMID: 37745562; PMCID: PMC10515936.

View in: PubMed Mentions:
Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies. Nat Commun. 2024 01 29; 15(1):875. Medina-Munoz HC, Kofman E, Jagannatha P, Boyle EA, Yu T, Jones KL, Mueller JR, Lykins GD, Doudna AT, Park SS, Blue SM, Ranzau BL, Kohli RM, Komor AC, Yeo GW. PMID: 38287010; PMCID: PMC10825223.

View in: PubMed Mentions: 14 Fields:
Bio Biology Sci Science
Translation:Cells
Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies. bioRxiv. 2023 Sep 25. Medina-Munoz HC, Kofman E, Jagannatha P, Boyle EA, Yu T, Jones KL, Mueller JR, Lykins GD, Doudna AT, Park SS, Blue SM, Ranzau BL, Kohli RM, Komor AC, Yeo GW. PMID: 37808757; PMCID: PMC10557582.

View in: PubMed Mentions:
HydRA: Deep-learning models for predicting RNA-binding capacity from protein interaction association context and protein sequence. Mol Cell. 2023 07 20; 83(14):2595-2611.e11. Jin W, Brannan KW, Kapeli K, Park SS, Tan HQ, Gosztyla ML, Mujumdar M, Ahdout J, Henroid B, Rothamel K, Xiang JS, Wong L, Yeo GW. PMID: 37421941; PMCID: PMC11098078.

View in: PubMed Mentions: 27 Fields:
Cel Cell Biology Mol Molecular Biology
Translation:Humans Animals Cells
Transcriptome-wide identification of RNA-binding protein binding sites using seCLIP-seq. Nat Protoc. 2022 05; 17(5):1223-1265. Blue SM, Yee BA, Pratt GA, Mueller JR, Park SS, Shishkin AA, Starner AC, Van Nostrand EL, Yeo GW. PMID: 35322209; PMCID: PMC11134598.

View in: PubMed Mentions: 49 Fields:
Cli Clinical Laboratory Techniques Sci Science
Translation:Cells
Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions. Res Sq. 2022 Mar 17. Xiang JS, Mueller JR, Luo EC, Yee BA, Schafer D, Schmok JC, Tan FE, Rothamel K, McVicar RN, Kwong EM, Croker BA, Jones KL, Her HL, Chen CY, Vu AQ, Jin W, Park SS, Le P, Brannan KW, Kofman ER, Li Y, Tankka AT, Dong KD, Song Y, Clark AE, Carlin AF, Van Nostrand EL, Leibel SL, Yeo GW. PMID: 35313591; PMCID: PMC8936114.

View in: PubMed Mentions:
Integrative RNA-omics Discovers GNAS Alternative Splicing as a Phenotypic Driver of Splicing Factor-Mutant Neoplasms. Cancer Discov. 2022 03 01; 12(3):836-855. Wheeler EC, Vora S, Mayer D, Kotini AG, Olszewska M, Park SS, Guccione E, Teruya-Feldstein J, Silverman L, Sunahara RK, Yeo GW, Papapetrou EP. PMID: 34620690; PMCID: PMC8904276.

View in: PubMed Mentions: 29 Fields:
Neo Neoplasms
Translation:Humans Cells
Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions. bioRxiv. 2022 Feb 23. Xiang JS, Mueller JR, Luo EC, Yee BA, Schafer D, Schmok JC, Tan FE, Rothamel K, McVicar RN, Kwong EM, Jones KL, Her HL, Chen CY, Vu AQ, Jin W, Park SS, Le P, Brannan KW, Kofman ER, Li Y, Tankka AT, Dong KD, Song Y, Carlin AF, Van Nostrand EL, Leibel SL, Yeo GW. PMID: 35233578; PMCID: PMC8887137.

View in: PubMed Mentions: 1
Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression. Genome Med. 2020 12 07; 12(1):112. Okholm TLH, Sathe S, Park SS, Kamstrup AB, Rasmussen AM, Shankar A, Chua ZM, Fristrup N, Nielsen MM, Vang S, Dyrskjøt L, Aigner S, Damgaard CK, Yeo GW, Pedersen JS. PMID: 33287884; PMCID: PMC7722315.

View in: PubMed Mentions: 111 Fields:
Gen Genetics
Translation:Humans Cells
Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins. Genome Biol. 2020 04 06; 21(1):90. Van Nostrand EL, Pratt GA, Yee BA, Wheeler EC, Blue SM, Mueller J, Park SS, Garcia KE, Gelboin-Burkhart C, Nguyen TB, Rabano I, Stanton R, Sundararaman B, Wang R, Fu XD, Graveley BR, Yeo GW. PMID: 32252787; PMCID: PMC7137325.

View in: PubMed Mentions: 133 Fields:
Gen Genetics
Translation:Humans Cells
Counseling services for Asian, Latino/a, and White American students: Initial severity, session attendance, and outcome. Cultur Divers Ethnic Minor Psychol. 2016 07; 22(3):299-310. Kim JE, Park SS, La A, Chang J, Zane N. PMID: 26390372; PMCID: PMC4801726.

View in: PubMed Mentions: 9 Fields:
Psy Psychology Soc Social Sciences
Translation:Humans