Nastassia Patin

Title(s)	ACAD PRG MGT OFCR 3, Integrative Oceanography Division
School	Vc-marine Sciences
Address	9500 Gilman Drive # La Jolla CA 92093
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Bibliographic

Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections. mBio. 2024 Apr 10; 15(4):e0342223. Royer C, Patin NV, Jesser KJ, Peña-Gonzalez A, Hatt JK, Trueba G, Levy K, Konstantinidis KT. PMID: 38488359; PMCID: PMC11005377.

View in: PubMed Mentions: 1 Fields:
Mic Microbiology
Translation:Humans Cells
Capturing marine microbiomes and environmental DNA: A field sampling guide. Front Microbiol. 2022; 13:1026596. Patin NV, Goodwin KD. PMID: 36713215; PMCID: PMC9877356.

View in: PubMed Mentions: 2
Long-Read Sequencing Improves Recovery of Picoeukaryotic Genomes and Zooplankton Marker Genes from Marine Metagenomes. mSystems. 2022 12 20; 7(6):e0059522. Patin NV, Goodwin KD. PMID: 36448813; PMCID: PMC9765425.

View in: PubMed Mentions: 9 Fields:
Mic Microbiology
Translation:Animals
Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake. Gigascience. 2022 07 28; 11. Thompson LR, Anderson SR, Den Uyl PA, Patin NV, Lim SJ, Sanderson G, Goodwin KD. PMID: 35902092; PMCID: PMC9334028.

View in: PubMed Mentions: 4 Fields:
Com Computational Biology Gen Genetics
Microbial diversity in tropical marine sediments assessed using culture-dependent and culture-independent techniques. Environ Microbiol. 2021 11; 23(11):6859-6875. Demko AM, Patin NV, Jensen PR. PMID: 34636122; PMCID: PMC8670064.

View in: PubMed Mentions: 7 Fields:
Env Environmental Health Mic Microbiology
Correction: Gulf of Mexico blue hole harbors high levels of novel microbial lineages. ISME J. 2021 Aug; 15(8):2490. Patin NV, Dietrich ZA, Stancil A, Quinan M, Beckler JS, Hall ER, Culter J, Smith CG, Taillefert M, Stewart FJ. PMID: 34035445; PMCID: PMC8319432.

View in: PubMed Mentions: Fields:
Env Environmental Health Mic Microbiology
Erratum for Patin et al., "The Role of the Gut Microbiome in Resisting Norovirus Infection as Revealed by a Human Challenge Study". mBio. 2021 Mar 16; 12(2). Patin NV, Peña-Gonzalez A, Hatt JK, Moe C, Kirby A, Konstantinidis KT. PMID: 33727365; PMCID: PMC8092231.

View in: PubMed Mentions: 1 Fields:
Mic Microbiology
Gulf of Mexico blue hole harbors high levels of novel microbial lineages. ISME J. 2021 08; 15(8):2206-2232. Patin NV, Dietrich ZA, Stancil A, Quinan M, Beckler JS, Hall ER, Culter J, Smith CG, Taillefert M, Stewart FJ. PMID: 33612832; PMCID: PMC8319197.

View in: PubMed Mentions: 9 Fields:
Env Environmental Health Mic Microbiology
Translation:Cells
The natural product biosynthetic potential of Red Sea nudibranch microbiomes. PeerJ. 2021; 9:e10525. Abdelrahman SM, Patin NV, Hanora A, Aboseidah A, Desoky S, Desoky SG, Stewart FJ, Lopanik NB. PMID: 33604161; PMCID: PMC7868072.

View in: PubMed Mentions: 4 Fields:
Bio Biology Env Environmental Health Med Medicine (General)
The Role of the Gut Microbiome in Resisting Norovirus Infection as Revealed by a Human Challenge Study. mBio. 2020 11 17; 11(6). Patin NV, Peña-Gonzalez A, Hatt JK, Moe C, Kirby A, Konstantinidis KT. PMID: 33203758; PMCID: PMC7683401.

View in: PubMed Mentions: 19 Fields:
Mic Microbiology
Translation:Humans Cells
Microbial and chemical dynamics of a toxic dinoflagellate bloom. PeerJ. 2020; 8:e9493. Patin NV, Brown E, Chebli G, Garfield C, Kubanek J, Stewart FJ. PMID: 33240577; PMCID: PMC7676380.

View in: PubMed Mentions: 1 Fields:
Bio Biology Env Environmental Health Med Medicine (General)
Detection of Natural Products and Their Producers in Ocean Sediments. Appl Environ Microbiol. 2019 04 15; 85(8). Tuttle RN, Demko AM, Patin NV, Kapono CA, Donia MS, Dorrestein P, Jensen PR. PMID: 30737349; PMCID: PMC6450032.

View in: PubMed Mentions: 16 Fields:
Mic Microbiology
Translation:Cells
The role of inter-species interactions in Salinispora specialized metabolism. Microbiology (Reading). 2018 07; 164(7):946-955. Patin NV, Floros DJ, Hughes CC, Dorrestein PC, Jensen PR. PMID: 29877785; PMCID: PMC6152374.

View in: PubMed Mentions: 6 Fields:
Mic Microbiology
Translation:Cells
Microbiome Dynamics in a Large Artificial Seawater Aquarium. Appl Environ Microbiol. 2018 05 15; 84(10). Patin NV, Pratte ZA, Regensburger M, Hall E, Gilde K, Dove ADM, Stewart FJ. PMID: 29523545; PMCID: PMC5930379.

View in: PubMed Mentions: 12 Fields:
Mic Microbiology
Translation:Animals Cells
Effects of Actinomycete Secondary Metabolites on Sediment Microbial Communities. Appl Environ Microbiol. 2017 02 15; 83(4). Patin NV, Schorn M, Aguinaldo K, Lincecum T, Moore BS, Jensen PR. PMID: 27986719; PMCID: PMC5288833.

View in: PubMed Mentions: 19 Fields:
Mic Microbiology
Translation:Cells PHPublic Health
Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters. Microbiology (Reading). 2016 12; 162(12):2075-2086. Schorn MA, Alanjary MM, Aguinaldo K, Korobeynikov A, Podell S, Patin N, Lincecum T, Jensen PR, Ziemert N, Moore BS. PMID: 27902408; PMCID: PMC5756490.

View in: PubMed Mentions: 33 Fields:
Mic Microbiology
Translation:Cells
Competitive strategies differentiate closely related species of marine actinobacteria. ISME J. 2016 Feb; 10(2):478-90. Patin NV, Duncan KR, Dorrestein PC, Jensen PR. PMID: 26241505; PMCID: PMC4737938.

View in: PubMed Mentions: 26 Fields:
Env Environmental Health Mic Microbiology
Translation:Cells
Antagonistic interactions mediated by marine bacteria: the role of small molecules. J Chem Ecol. 2013 Jul; 39(7):879-91. Wietz M, Duncan K, Patin NV, Jensen PR. PMID: 23852047.

View in: PubMed Mentions: 18 Fields:
Che Chemistry Env Environmental Health
Translation:Animals
Effects of OTU clustering and PCR artifacts on microbial diversity estimates. Microb Ecol. 2013 Apr; 65(3):709-19. Patin NV, Kunin V, Lidström U, Ashby MN. PMID: 23233090.

View in: PubMed Mentions: 20 Fields:
Mic Microbiology
Translation:Cells