Deepshika Ramanan

Title(s)Assistant Adjunct Professor, Molecular Biology
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Gut complement induced by the microbiota combats pathogens and spares commensals. Cell. 2024 Feb 15; 187(4):897-913.e18. Wu M, Zheng W, Song X, Bao B, Wang Y, Ramanan D, Yang D, Liu R, Macbeth JC, Do EA, Andrade WA, Yang T, Cho HS, Gazzaniga FS, Ilves M, Coronado D, Thompson C, Hang S, Chiu IM, Moffitt JR, Hsiao A, Mekalanos JJ, Benoist C, Kasper DL. PMID: 38280374; PMCID: PMC10922926.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    2. Homeostatic, repertoire and transcriptional relationships between colon T regulatory cell subsets. Proc Natl Acad Sci U S A. 2023 Dec 12; 120(50):e2311566120. Ramanan D, Chowdhary K, Candéias SM, Sassone-Corsi M, Gelineau A, Mathis D, Benoist C. PMID: 38064511; PMCID: PMC10723124.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    3. Regulatory T cells in the face of the intestinal microbiota. Nat Rev Immunol. 2023 Nov; 23(11):749-762. Ramanan D, Pratama A, Zhu Y, Venezia O, Sassone-Corsi M, Chowdhary K, Galván-Peña S, Sefik E, Brown C, Gélineau A, Mathis D, Benoist C. PMID: 37316560.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    4. Homeostatic, repertoire and transcriptional relationships between colon T regulatory cell subsets. bioRxiv. 2023 May 19. Ramanan D, Chowdhary K, Candéias SM, Sassone-Corsi M, Mathis D, Benoist C. PMID: 37292878; PMCID: PMC10245751.
      View in: PubMed   Mentions:
    5. Porcine reproductive and respiratory syndrome virus degrades DDX10 via SQSTM1/p62-dependent selective autophagy to antagonize its antiviral activity. Autophagy. 2023 08; 19(8):2257-2274. Li J, Zhou Y, Zhao W, Liu J, Ullah R, Fang P, Fang L, Xiao S. PMID: 36779599; PMCID: PMC10351467.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    6. Microbiome induced complement synthesized in the gut protects against enteric infections. bioRxiv. 2023 Feb 03. Wu M, Zheng W, Song X, Bao B, Wang Y, Ramanan D, Yang D, Liu R, Macbeth JC, Do EA, Andrade WA, Yang T, Cho HS, Gazzaniga FS, Ilves M, Coronado D, Thompson C, Hang S, Chiu IM, Moffitt JR, Hsiao A, Mekalanos JJ, Benoist C, Kasper DL. PMID: 36778396; PMCID: PMC9915568.
      View in: PubMed   Mentions:
    7. [Determination of organophosphate diesters in facility vegetable soils using ultra-high performance liquid chromatography-electrostatic field orbitrap high resolution mass spectrometry]. Se Pu. 2023 Jan; 41(1):58-65. Liu M, Wang M, Zhao A, Zhu L, Wang C, Wei C, Liu W, Xu J. PMID: 36633077.
      View in: PubMed   Mentions:    Fields:    
    8. Sequestration of gut pathobionts in intraluminal casts, a mechanism to avoid dysregulated T cell activation by pathobionts. Proc Natl Acad Sci U S A. 2022 10 11; 119(41):e2209624119. Sassone-Corsi M, Azriel S, Simon A, Ramanan D, Ortiz-Lopez A, Chen F, Yissachar N, Mathis D, Benoist C. PMID: 36201539; PMCID: PMC9565271.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    9. Interleukin-6 produced by enteric neurons regulates the number and phenotype of microbe-responsive regulatory T cells in the gut. Immunity. 2021 03 09; 54(3):499-513.e5. Yan Y, Ramanan D, Rozenberg M, McGovern K, Rastelli D, Vijaykumar B, Yaghi O, Voisin T, Mosaheb M, Chiu I, Itzkovitz S, Rao M, Mathis D, Benoist C. PMID: 33691135; PMCID: PMC8133394.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    10. Injury, Illness, and Mental Health Risks in United States Domestic Mariners. J Occup Environ Med. 2020 10; 62(10):839-841. Lefkowitz RY, Null DB, Slade MD, Redlich CA. PMID: 32769797.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    11. An Immunologic Mode of Multigenerational Transmission Governs a Gut Treg Setpoint. Cell. 2020 06 11; 181(6):1276-1290.e13. Ramanan D, Sefik E, Galván-Peña S, Wu M, Yang L, Yang Z, Kostic A, Golovkina TV, Kasper DL, Mathis D, Benoist C. PMID: 32402238; PMCID: PMC7393667.
      View in: PubMed   Mentions: 52     Fields:    Translation:AnimalsCells
    12. Imaging examination, diagnosis, and control and prevention of nosocomial infection for coronavirus disease 2019: Expert consensus of Hunan radiologist. Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2020 Mar 28; 45(3):221-228. Liu J, Wang W. PMID: 32386011.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCellsPHPublic Health
    13. Molecular diversification of regulatory T cells in nonlymphoid tissues. Sci Immunol. 2018 09 14; 3(27). DiSpirito JR, Zemmour D, Ramanan D, Cho J, Zilionis R, Klein AM, Benoist C, Mathis D. PMID: 30217811; PMCID: PMC6219455.
      View in: PubMed   Mentions: 63     Fields:    Translation:AnimalsCells
    14. B Cell Defects Observed in Nod2 Knockout Mice Are a Consequence of a Dock2 Mutation Frequently Found in Inbred Strains. J Immunol. 2018 09 01; 201(5):1442-1451. Wong SY, Coffre M, Ramanan D, Hines MJ, Gomez LE, Peters LA, Schadt EE, Koralov SB, Cadwell K. PMID: 30012848; PMCID: PMC6103850.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    15. Helminth infection promotes colonization resistance via type 2 immunity. Science. 2016 Apr 29; 352(6285):608-12. Ramanan D, Bowcutt R, Lee SC, Tang MS, Kurtz ZD, Ding Y, Honda K, Gause WC, Blaser MJ, Bonneau RA, Lim YA, Loke P, Cadwell K. PMID: 27080105; PMCID: PMC4905769.
      View in: PubMed   Mentions: 192     Fields:    Translation:AnimalsCells
    16. Intrinsic Defense Mechanisms of the Intestinal Epithelium. Cell Host Microbe. 2016 Apr 13; 19(4):434-41. Ramanan D, Cadwell K. PMID: 27049583; PMCID: PMC4861060.
      View in: PubMed   Mentions: 51     Fields:    Translation:HumansAnimals
    17. Bacterial sensor Nod2 prevents inflammation of the small intestine by restricting the expansion of the commensal Bacteroides vulgatus. Immunity. 2014 Aug 21; 41(2):311-24. Ramanan D, Tang MS, Bowcutt R, Loke P, Cadwell K. PMID: 25088769; PMCID: PMC4238935.
      View in: PubMed   Mentions: 149     Fields:    Translation:AnimalsCells
    18. A deficiency in the autophagy gene Atg16L1 enhances resistance to enteric bacterial infection. Cell Host Microbe. 2013 Aug 14; 14(2):216-24. Marchiando AM, Ramanan D, Ding Y, Gomez LE, Hubbard-Lucey VM, Maurer K, Wang C, Ziel JW, van Rooijen N, Nuñez G, Finlay BB, Mysorekar IU, Cadwell K. PMID: 23954160; PMCID: PMC3825684.
      View in: PubMed   Mentions: 67     Fields:    Translation:AnimalsCells
    19. Release mode of large and small dense-core vesicles specified by different synaptotagmin isoforms in PC12 cells. Mol Biol Cell. 2011 Jul 01; 22(13):2324-36. Zhang Z, Wu Y, Wang Z, Dunning FM, Rehfuss J, Ramanan D, Chapman ER, Jackson MB. PMID: 21551071; PMCID: PMC3128534.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
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