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Glenn Tesler

Title(s)Professor, Mathematics
SchoolVc-academic Affairs
Address9500 Gilman Drive #0112
La Jolla CA 92093
Phone8/5-34--5931
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Correction: Predicting Carriers of Ongoing Selective Sweeps without Knowledge of the Favored Allele. PLoS Genet. 2016 Nov; 12(11):e1006472. Ronen R, Tesler G, Akbari A, Zakov S, Rosenberg NA, Bafna V. PMID: 27902698.
      View in: PubMed   Mentions:    Fields:    
    2. Predicting Carriers of Ongoing Selective Sweeps without Knowledge of the Favored Allele. PLoS Genet. 2015 Sep; 11(9):e1005527. Ronen R, Tesler G, Akbari A, Zakov S, Rosenberg NA, Bafna V. PMID: 26402243.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    3. Assembling single-cell genomes and mini-metagenomes from chimeric MDA products. J Comput Biol. 2013 Oct; 20(10):714-37. Nurk S, Bankevich A, Antipov D, Gurevich AA, Korobeynikov A, Lapidus A, Prjibelski AD, Pyshkin A, Sirotkin A, Sirotkin Y, Stepanauskas R, Clingenpeel SR, Woyke T, McLean JS, Lasken R, Tesler G, Alekseyev MA, Pevzner PA. PMID: 24093227.
      View in: PubMed   Mentions: 331     Fields:    Translation:Cells
    4. Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum. Proc Natl Acad Sci U S A. 2013 Jun 25; 110(26):E2390-9. McLean JS, Lombardo MJ, Badger JH, Edlund A, Novotny M, Yee-Greenbaum J, Vyahhi N, Hall AP, Yang Y, Dupont CL, Ziegler MG, Chitsaz H, Allen AE, Yooseph S, Tesler G, Pevzner PA, Friedman RM, Nealson KH, Venter JC, Lasken RS. PMID: 23754396.
      View in: PubMed   Mentions: 65     Fields:    Translation:HumansCellsPHPublic Health
    5. Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform. Genome Res. 2013 May; 23(5):867-77. McLean JS, Lombardo MJ, Ziegler MG, Novotny M, Yee-Greenbaum J, Badger JH, Tesler G, Nurk S, Lesin V, Brami D, Hall AP, Edlund A, Allen LZ, Durkin S, Reed S, Torriani F, Nealson KH, Pevzner PA, Friedman R, Venter JC, Lasken RS. PMID: 23564253.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    6. Characterizing the relationship between steady state and response using analytical expressions for the steady states of mass action models. PLoS Comput Biol. 2013; 9(2):e1002901. Loriaux PM, Tesler G, Hoffmann A. PMID: 23509437.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    7. QUAST: quality assessment tool for genome assemblies. Bioinformatics. 2013 Apr 15; 29(8):1072-5. Gurevich A, Saveliev V, Vyahhi N, Tesler G. PMID: 23422339.
      View in: PubMed   Mentions: 843     Fields:    Translation:HumansAnimalsCells
    8. Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory. BMC Bioinformatics. 2012 Sep 19; 13:238. Chaisson MJ, Tesler G. PMID: 22988817.
      View in: PubMed   Mentions: 266     Fields:    Translation:Cells
    9. Pathset graphs: a novel approach for comprehensive utilization of paired reads in genome assembly. J Comput Biol. 2013 Apr; 20(4):359-71. Pham SK, Antipov D, Sirotkin A, Tesler G, Pevzner PA, Alekseyev MA. PMID: 22803627.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    10. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 2012 May; 19(5):455-77. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, Sirotkin AV, Vyahhi N, Tesler G, Alekseyev MA, Pevzner PA. PMID: 22506599.
      View in: PubMed   Mentions: 3393     Fields:    Translation:Cells
    11. How to apply de Bruijn graphs to genome assembly. Nat Biotechnol. 2011 Nov 08; 29(11):987-91. Compeau PE, Pevzner PA, Tesler G. PMID: 22068540.
      View in: PubMed   Mentions: 110     Fields:    Translation:Cells
    12. Paired de bruijn graphs: a novel approach for incorporating mate pair information into genome assemblers. J Comput Biol. 2011 Nov; 18(11):1625-34. Medvedev P, Pham S, Chaisson M, Tesler G, Pevzner P. PMID: 21999285.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    13. Efficient de novo assembly of single-cell bacterial genomes from short-read data sets. Nat Biotechnol. 2011 Sep 18; 29(10):915-21. Chitsaz H, Yee-Greenbaum JL, Tesler G, Lombardo MJ, Dupont CL, Badger JH, Novotny M, Rusch DB, Fraser LJ, Gormley NA, Schulz-Trieglaff O, Smith GP, Evers DJ, Pevzner PA, Lasken RS. PMID: 21926975.
      View in: PubMed   Mentions: 90     Fields:    Translation:Cells
    14. RAPID detection of gene-gene interactions in genome-wide association studies. Bioinformatics. 2010 Nov 15; 26(22):2856-62. Brinza D, Schultz M, Tesler G, Bafna V. PMID: 20871107.
      View in: PubMed   Mentions: 11     Fields:    
    15. Special issue on the RECOMB Satellite Workshop on Comparative Genomics 2007. Preface. J Comput Biol. 2008 Oct; 15(8):943-6. Tesler G, Durand D. PMID: 18808329.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    16. Computational tools for the analysis of rearrangements in mammalian genomes. Methods Mol Biol. 2008; 452:431-55. Bourque G, Tesler G. PMID: 18566776.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    17. Computational tools for the analysis of rearrangements in mammalian genomes. Methods Mol Biol. 2008; 422:145-70. Tesler G, Bourque G. PMID: 18629666.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    18. Initial sequence and comparative analysis of the cat genome. Genome Res. 2007 Nov; 17(11):1675-89. Pontius JU, Mullikin JC, Smith DR, Lindblad-Toh K, Gnerre S, Clamp M, Chang J, Stephens R, Neelam B, Volfovsky N, Schäffer AA, Agarwala R, Narfström K, Murphy WJ, Giger U, Roca AL, Antunes A, Menotti-Raymond M, Yuhki N, Pecon-Slattery J, Johnson WE, Bourque G, Tesler G, O'Brien SJ. PMID: 17975172.
      View in: PubMed   Mentions: 131     Fields:    Translation:HumansAnimalsCells
    19. The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction. Genome Res. 2006 Mar; 16(3):311-3. Bourque G, Tesler G, Pevzner PA. PMID: 16510896.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    20. The fragile breakage versus random breakage models of chromosome evolution. PLoS Comput Biol. 2006 Feb; 2(2):e14. Peng Q, Pevzner PA, Tesler G. PMID: 16501665.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    21. Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science. 2005 Jul 22; 309(5734):613-7. Murphy WJ, Larkin DM, Everts-van der Wind A, Bourque G, Tesler G, Auvil L, Beever JE, Chowdhary BP, Galibert F, Gatzke L, Hitte C, Meyers SN, Milan D, Ostrander EA, Pape G, Parker HG, Raudsepp T, Rogatcheva MB, Schook LB, Skow LC, Welge M, Womack JE, O'brien SJ, Pevzner PA, Lewin HA. PMID: 16040707.
      View in: PubMed   Mentions: 211     Fields:    Translation:HumansAnimalsCells
    22. Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages. Genome Res. 2005 Jan; 15(1):98-110. Bourque G, Zdobnov EM, Bork P, Pevzner PA, Tesler G. PMID: 15590940.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansAnimalsCells
    23. De novo repeat classification and fragment assembly. Genome Res. 2004 Sep; 14(9):1786-96. Pevzner PA, Pevzner PA, Tang H, Tesler G. PMID: 15342561.
      View in: PubMed   Mentions: 51     Fields:    Translation:HumansCells
    24. Detailed four-way comparative mapping and gene order analysis of the canine ctvm locus reveals evolutionary chromosome rearrangements. Genomics. 2004 Jun; 83(6):1053-62. Andelfinger G, Hitte C, Etter L, Guyon R, Bourque G, Tesler G, Pevzner P, Kirkness E, Galibert F, Benson DW. PMID: 15177558.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    25. Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes. Genome Res. 2004 Apr; 14(4):507-16. Bourque G, Pevzner PA, Tesler G. PMID: 15059991.
      View in: PubMed   Mentions: 86     Fields:    Translation:HumansAnimalsCells
    26. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 2004 Apr 01; 428(6982):493-521. Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, Dugan-Rocha S, Miner G, Morgan M, Hawes A, Gill R, Holt RA, Adams MD, Amanatides PG, Baden-Tillson H, Barnstead M, Chin S, Evans CA, Ferriera S, Fosler C, Glodek A, Gu Z, Jennings D, Kraft CL, Nguyen T, Pfannkoch CM, Sitter C, Sutton GG, Venter JC, Woodage T, Smith D, Lee HM, Gustafson E, Cahill P, Kana A, Doucette-Stamm L, Weinstock K, Fechtel K, Weiss RB, Dunn DM, Green ED, Blakesley RW, Bouffard GG, De Jong PJ, Osoegawa K, Zhu B, Marra M, Schein J, Bosdet I, Fjell C, Jones S, Krzywinski M, Mathewson C, Siddiqui A, Wye N, McPherson J, Zhao S, Fraser CM, Shetty J, Shatsman S, Geer K, Chen Y, Abramzon S, Nierman WC, Havlak PH, Chen R, Durbin KJ, Egan A, Ren Y, Song XZ, Li B, Liu Y, Qin X, Cawley S, Worley KC, Cooney AJ, D'Souza LM, Martin K, Wu JQ, Gonzalez-Garay ML, Jackson AR, Kalafus KJ, McLeod MP, Milosavljevic A, Virk D, Volkov A, Wheeler DA, Zhang Z, Bailey JA, Eichler EE, Tuzun E, Birney E, Mongin E, Ureta-Vidal A, Woodwark C, Zdobnov E, Bork P, Suyama M, Torrents D, Alexandersson M, Trask BJ, Young JM, Huang H, Wang H, Xing H, Daniels S, Gietzen D, Schmidt J, Stevens K, Vitt U, Wingrove J, Camara F, Mar Albà M, Abril JF, Guigo R, Smit A, Dubchak I, Rubin EM, Couronne O, Poliakov A, Hübner N, Ganten D, Goesele C, Hummel O, Kreitler T, Lee YA, Monti J, Schulz H, Zimdahl H, Himmelbauer H, Lehrach H, Jacob HJ, Bromberg S, Gullings-Handley J, Jensen-Seaman MI, Kwitek AE, Lazar J, Pasko D, Tonellato PJ, Twigger S, Ponting CP, Duarte JM, Rice S, Goodstadt L, Beatson SA, Emes RD, Winter EE, Webber C, Brandt P, Nyakatura G, Adetobi M, Chiaromonte F, Elnitski L, Eswara P, Hardison RC, Hou M, Kolbe D, Makova K, Miller W, Nekrutenko A, Riemer C, Schwartz S, Taylor J, Yang S, Zhang Y, Lindpaintner K, Andrews TD, Caccamo M, Clamp M, Clarke L, Curwen V, Durbin R, Eyras E, Searle SM, Cooper GM, Batzoglou S, Brudno M, Sidow A, Stone EA, Venter JC, Payseur BA, Bourque G, López-Otín C, Puente XS, Chakrabarti K, Chatterji S, Dewey C, Pachter L, Bray N, Yap VB, Caspi A, Tesler G, Pevzner PA, Haussler D, Roskin KM, Baertsch R, Clawson H, Furey TS, Hinrichs AS, Karolchik D, Kent WJ, Rosenbloom KR, Trumbower H, Weirauch M, Cooper DN, Stenson PD, Ma B, Brent M, Arumugam M, Shteynberg D, Copley RR, Taylor MS, Riethman H, Mudunuri U, Peterson J, Guyer M, Felsenfeld A, Old S, Mockrin S, Collins F. PMID: 15057822.
      View in: PubMed   Mentions: 715     Fields:    Translation:HumansAnimalsCells
    27. Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps. Hum Genomics. 2003 Nov; 1(1):30-40. Murphy WJ, Bourque G, Tesler G, Pevzner P, O'Brien SJ. PMID: 15601531.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    28. Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proc Natl Acad Sci U S A. 2003 Jun 24; 100(13):7672-7. Pevzner P, Tesler G. PMID: 12810957.
      View in: PubMed   Mentions: 126     Fields:    Translation:HumansAnimalsCells
    29. Genome rearrangements in mammalian evolution: lessons from human and mouse genomes. Genome Res. 2003 Jan; 13(1):37-45. Pevzner P, Tesler G. PMID: 12529304.
      View in: PubMed   Mentions: 108     Fields:    Translation:HumansAnimalsCells
    30. Initial sequencing and comparative analysis of the mouse genome. Nature. 2002 Dec 05; 420(6915):520-62. Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, Barlow K, Beck S, Berry E, Birren B, Bloom T, Bork P, Botcherby M, Bray N, Brent MR, Brown DG, Brown SD, Bult C, Burton J, Butler J, Campbell RD, Carninci P, Cawley S, Chiaromonte F, Chinwalla AT, Church DM, Clamp M, Clee C, Collins FS, Cook LL, Copley RR, Coulson A, Couronne O, Cuff J, Curwen V, Cutts T, Daly M, David R, Davies J, Delehaunty KD, Deri J, Dermitzakis ET, Dewey C, Dickens NJ, Diekhans M, Dodge S, Dubchak I, Dunn DM, Eddy SR, Elnitski L, Emes RD, Eswara P, Eyras E, Felsenfeld A, Fewell GA, Flicek P, Foley K, Frankel WN, Fulton LA, Fulton RS, Furey TS, Gage D, Gibbs RA, Glusman G, Gnerre S, Goldman N, Goodstadt L, Grafham D, Graves TA, Green ED, Gregory S, Guigó R, Guyer M, Hardison RC, Haussler D, Hayashizaki Y, Hillier LW, Hinrichs A, Hlavina W, Holzer T, Hsu F, Hua A, Hubbard T, Hunt A, Jackson I, Jaffe DB, Johnson LS, Jones M, Jones TA, Joy A, Kamal M, Karlsson EK, Karolchik D, Kasprzyk A, Kawai J, Keibler E, Kells C, Kent WJ, Kirby A, Kolbe DL, Korf I, Kucherlapati RS, Kulbokas EJ, Kulp D, Landers T, Leger JP, Leonard S, Letunic I, Levine R, Li J, Li M, Lloyd C, Lucas S, Ma B, Maglott DR, Mardis ER, Matthews L, Mauceli E, Mayer JH, McCarthy M, McCombie WR, McLaren S, McLay K, McPherson JD, Meldrim J, Meredith B, Mesirov JP, Miller W, Miner TL, Mongin E, Montgomery KT, Morgan M, Mott R, Mullikin JC, Muzny DM, Nash WE, Nelson JO, Nhan MN, Nicol R, Ning Z, Nusbaum C, O'Connor MJ, Okazaki Y, Oliver K, Overton-Larty E, Pachter L, Parra G, Pepin KH, Peterson J, Pevzner P, Plumb R, Pohl CS, Poliakov A, Ponce TC, Ponting CP, Potter S, Quail M, Reymond A, Roe BA, Roskin KM, Rubin EM, Rust AG, Santos R, Sapojnikov V, Schultz B, Schultz J, Schwartz MS, Schwartz S, Scott C, Seaman S, Searle S, Sharpe T, Sheridan A, Shownkeen R, Sims S, Singer JB, Slater G, Smit A, Smith DR, Spencer B, Stabenau A, Stange-Thomann N, Sugnet C, Suyama M, Tesler G, Thompson J, Torrents D, Trevaskis E, Tromp J, Ucla C, Ureta-Vidal A, Vinson JP, Von Niederhausern AC, Wade CM, Wall M, Weber RJ, Weiss RB, Wendl MC, West AP, Wetterstrand K, Wheeler R, Whelan S, Wierzbowski J, Willey D, Williams S, Wilson RK, Winter E, Worley KC, Wyman D, Yang S, Yang SP, Zdobnov EM, Zody MC, Lander ES. PMID: 12466850.
      View in: PubMed   Mentions: 2390     Fields:    Translation:HumansAnimalsCells
    31. GRIMM: genome rearrangements web server. Bioinformatics. 2002 Mar; 18(3):492-3. Tesler G. PMID: 11934753.
      View in: PubMed   Mentions: 113     Fields:    Translation:HumansAnimalsCells
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