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Varsha Badal

Title(s)Postdoctoral Scholar, Psychiatry
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #0664
La Jolla CA 92093
Phone000-000-NULL
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment. Proteins. 2019 12; 87(12):1200-1221. Lensink MF, Brysbaert G, Nadzirin N, Velankar S, Chaleil RAG, Gerguri T, Bates PA, Laine E, Carbone A, Grudinin S, Kong R, Liu RR, Xu XM, Shi H, Chang S, Eisenstein M, Karczynska A, Czaplewski C, Lubecka E, Lipska A, Krupa P, Mozolewska M, Golon L, Samsonov S, Liwo A, Crivelli S, Pagès G, Karasikov M, Kadukova M, Yan Y, Huang SY, Rosell M, Rodríguez-Lumbreras LA, Romero-Durana M, Díaz-Bueno L, Fernandez-Recio J, Christoffer C, Terashi G, Shin WH, Aderinwale T, Maddhuri Venkata Subraman SR, Kihara D, Kozakov D, Vajda S, Porter K, Padhorny D, Desta I, Beglov D, Ignatov M, Kotelnikov S, Moal IH, Ritchie DW, Chauvot de Beauchêne I, Maigret B, Devignes MD, Ruiz Echartea ME, Barradas-Bautista D, Cao Z, Cavallo L, Oliva R, Cao Y, Shen Y, Baek M, Park T, Woo H, Seok C, Braitbard M, Bitton L, Scheidman-Duhovny D, Dapkunas J, Olechnovic K, Venclovas C, Kundrotas PJ, Belkin S, Chakravarty D, Badal VD, Vakser IA, Vreven T, Vangaveti S, Borrman T, Weng Z, Guest JD, Gowthaman R, Pierce BG, Xu X, Duan R, Qiu L, Hou J, Ryan Merideth B, Ma Z, Cheng J, Zou X, Koukos PI, Roel-Touris J, Ambrosetti F, Geng C, Schaarschmidt J, Trellet ME, Melquiond ASJ, Xue L, Jiménez-García B, van Noort CW, Honorato RV, Bonvin AMJJ, Wodak SJ. PMID: 31612567.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    2. Challenges in the construction of knowledge bases for human microbiome-disease associations. Microbiome. 2019 09 05; 7(1):129. Badal VD, Wright D, Katsis Y, Kim HC, Swafford AD, Knight R, Hsu CN. PMID: 31488215.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    3. Natural language processing in text mining for structural modeling of protein complexes. BMC Bioinformatics. 2018 03 05; 19(1):84. Badal VD, Kundrotas PJ, Vakser IA. PMID: 29506465.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    4. Modeling CAPRI targets 110-120 by template-based and free docking using contact potential and combined scoring function. Proteins. 2018 03; 86 Suppl 1:302-310. Kundrotas PJ, Anishchenko I, Badal VD, Das M, Dauzhenka T, Vakser IA. PMID: 28905425.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    5. Text Mining for Protein Docking. PLoS Comput Biol. 2015 Dec; 11(12):e1004630. Badal VD, Kundrotas PJ, Vakser IA. PMID: 26650466.
      View in: PubMed   Mentions: 5     Fields:    
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