Minoru Koi

Title(s)Project Scientist, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. High-throughput sequencing and in-silico analysis confirm pathogenicity of novel MSH3 variants in African American colorectal cancer. Neoplasia. 2024 Mar; 49:100970. Rashid M, Rashid R, Gadewal N, Carethers JM, Koi M, Brim H, Ashktorab H. PMID: 38281411; PMCID: PMC10840101.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. Compound heterozygous MSH3 germline variants and associated tumor somatic DNA mismatch repair dysfunction. NPJ Precis Oncol. 2024 Jan 19; 8(1):12. Koi M, Leach BH, McGee S, Tseng-Rogenski SS, Burke CA, Carethers JM. PMID: 38243056; PMCID: PMC10798947.
      View in: PubMed   Mentions:
    3. Fusobacterium nucleatum Load Correlates with KRAS Mutation and Sessile Serrated Pathogenesis in Colorectal Adenocarcinoma. Cancer Res Commun. 2023 09 26; 3(9):1940-1951. Takeda K, Koi M, Okita Y, Sajibu S, Keku TO, Carethers JM. PMID: 37772997; PMCID: PMC10530411.
      View in: PubMed   Mentions: Translation:HumansCells
    4. Serendipity Strikes: How Pursuing Novel Hypotheses Shifted the Paradigm Regarding the Genetic Basis of Colorectal Cancer and Changed Cancer Therapy. Dig Dis Sci. 2023 09; 68(9):3504-3513. Boland CR, Koi M, Hawn MT, Carethers JM, Yurgelun MB. PMID: 37402979.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    5. ALDH1A1 Expression Is Enriched in Early-Onset Colorectal Cancers. Gastroenterology. 2022 12; 163(6):1679-1681.e1. Venugopal A, Koi M, Choi C, Kim HR, Speliotes EK, Carethers JM. PMID: 35985512; PMCID: PMC10386851.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    6. Co-morbid risk factors and NSAID use among white and black Americans that predicts overall survival from diagnosed colon cancer. PLoS One. 2020; 15(10):e0239676. Koi M, Okita Y, Takeda K, Koeppe ES, Stoffel EM, Galanko JA, McCoy AN, Keku T, Carethers JM. PMID: 33027290; PMCID: PMC7540856.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    7. Fusobacterium nucleatum infection correlates with two types of microsatellite alterations in colorectal cancer and triggers DNA damage. Gut Pathog. 2020; 12:46. Okita Y, Koi M, Takeda K, Ross R, Mukherjee B, Koeppe E, Stoffel EM, Galanko JA, McCoy AN, Keku TO, Okugawa Y, Kitajima T, Toiyama Y, Martens E, Carethers JM. PMID: 33005238; PMCID: PMC7526104.
      View in: PubMed   Mentions: 18  
    8. The Human DNA Mismatch Repair Protein MSH3 Contains Nuclear Localization and Export Signals That Enable Nuclear-Cytosolic Shuttling in Response to Inflammation. Mol Cell Biol. 2020 06 15; 40(13). Tseng-Rogenski SS, Munakata K, Choi DY, Martin PK, Mehta S, Koi M, Zheng W, Zhang Y, Carethers JM. PMID: 32284349; PMCID: PMC7296213.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    9. Altered ARID1A expression in colorectal cancer. BMC Cancer. 2020 Apr 25; 20(1):350. Erfani M, Hosseini SV, Mokhtari M, Zamani M, Tahmasebi K, Alizadeh Naini M, Taghavi A, Carethers JM, Koi M, Brim H, Mokarram P, Ashktorab H. PMID: 32334542; PMCID: PMC7183124.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    10. Inflammation-Associated Microsatellite Alterations Caused by MSH3 Dysfunction Are Prevalent in Ulcerative Colitis and Increase With Neoplastic Advancement. Clin Transl Gastroenterol. 2019 12; 10(12):e00105. Munakata K, Koi M, Kitajima T, Tseng-Rogenski S, Uemura M, Matsuno H, Kawai K, Sekido Y, Mizushima T, Toiyama Y, Yamada T, Mano M, Mita E, Kusunoki M, Mori M, Carethers JM. PMID: 31789935; PMCID: PMC6970556.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    11. Werner syndrome helicase is a selective vulnerability of microsatellite instability-high tumor cells. Elife. 2019 03 25; 8. Lieb S, Blaha-Ostermann S, Kamper E, Rippka J, Schwarz C, Ehrenhöfer-Wölfer K, Schlattl A, Wernitznig A, Lipp JJ, Nagasaka K, van der Lelij P, Bader G, Koi M, Goel A, Neumüller RA, Peters JM, Kraut N, Pearson MA, Petronczki M, Wöhrle S. PMID: 30910006; PMCID: PMC6435321.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
    12. Fusobacterium nucleatum Infection in Colorectal Cancer: Linking Inflammation, DNA Mismatch Repair and Genetic and Epigenetic Alterations. J Anus Rectum Colon. 2018; 2(2):37-46. Koi M, Okita Y, Carethers JM. PMID: 30116794; PMCID: PMC6090547.
      View in: PubMed   Mentions: 30  
    13. Inflammation-associated microsatellite alterations: Mechanisms and significance in the prognosis of patients with colorectal cancer. World J Gastrointest Oncol. 2018 Jan 15; 10(1):1-14. Koi M, Tseng-Rogenski SS, Carethers JM. PMID: 29375743; PMCID: PMC5767788.
      View in: PubMed   Mentions: 29  
    14. The colorectal cancer immune microenvironment and approach to immunotherapies. Future Oncol. 2017 Aug; 13(18):1633-1647. Koi M, Carethers JM. PMID: 28829193; PMCID: PMC6817965.
      View in: PubMed   Mentions: 59     Fields:    Translation:HumansAnimals
    15. Microsatellite Alterations With Allelic Loss at 9p24.2 Signify Less-Aggressive Colorectal Cancer Metastasis. Gastroenterology. 2016 Apr; 150(4):944-55. Koi M, Garcia M, Choi C, Kim HR, Koike J, Hemmi H, Nagasaka T, Okugawa Y, Toiyama Y, Kitajima T, Imaoka H, Kusunoki M, Chen YH, Mukherjee B, Boland CR, Carethers JM. PMID: 26752111; PMCID: PMC4808397.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    16. EMAST is a Form of Microsatellite Instability That is Initiated by Inflammation and Modulates Colorectal Cancer Progression. Genes (Basel). 2015 Mar 31; 6(2):185-205. Carethers JM, Koi M, Tseng-Rogenski SS. PMID: 25836926; PMCID: PMC4488660.
      View in: PubMed   Mentions: 59     Fields:    
    17. MicroRNA-200c modulates epithelial-to-mesenchymal transition (EMT) in human colorectal cancer metastasis. Gut. 2013 Sep; 62(9):1315-26. Hur K, Toiyama Y, Takahashi M, Balaguer F, Nagasaka T, Koike J, Hemmi H, Koi M, Boland CR, Goel A. PMID: 22735571; PMCID: PMC3787864.
      View in: PubMed   Mentions: 296     Fields:    Translation:HumansCells
    18. Association between recurrent metastasis from stage II and III primary colorectal tumors and moderate microsatellite instability. Gastroenterology. 2012 Jul; 143(1):48-50.e1. Garcia M, Choi C, Kim HR, Daoud Y, Toiyama Y, Takahashi M, Goel A, Boland CR, Koi M. PMID: 22465427; PMCID: PMC3383934.
      View in: PubMed   Mentions: 39     Fields:    Translation:Humans
    19. Down-regulation of MutS homolog 3 by hypoxia in human colorectal cancer. Biochim Biophys Acta. 2012 Apr; 1823(4):889-99. Li J, Koike J, Kugoh H, Arita M, Ohhira T, Kikuchi Y, Funahashi K, Takamatsu K, Boland CR, Koi M, Hemmi H. PMID: 22343000; PMCID: PMC3793328.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    20. De novo constitutional MLH1 epimutations confer early-onset colorectal cancer in two new sporadic Lynch syndrome cases, with derivation of the epimutation on the paternal allele in one. Int J Cancer. 2011 Feb 15; 128(4):869-78. Goel A, Nguyen TP, Leung HC, Nagasaka T, Rhees J, Hotchkiss E, Arnold M, Banerji P, Koi M, Kwok CT, Packham D, Lipton L, Boland CR, Ward RL, Hitchins MP. PMID: 20473912; PMCID: PMC3794437.
      View in: PubMed   Mentions: 36     Fields:    Translation:Humans
    21. MSH3 mediates sensitization of colorectal cancer cells to cisplatin, oxaliplatin, and a poly(ADP-ribose) polymerase inhibitor. J Biol Chem. 2011 Apr 08; 286(14):12157-65. Takahashi M, Koi M, Balaguer F, Boland CR, Goel A. PMID: 21285347; PMCID: PMC3069420.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansCells
    22. Tumor hypoxia and genetic alterations in sporadic cancers. J Obstet Gynaecol Res. 2011 Feb; 37(2):85-98. Koi M, Boland CR. PMID: 21272156; PMCID: PMC3079283.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    23. Microsatellite instability at tetranucleotide repeats in sporadic colorectal cancer in Japan. Oncol Rep. 2010 Feb; 23(2):551-61. Yamada K, Kanazawa S, Koike J, Sugiyama H, Xu C, Funahashi K, Boland CR, Koi M, Hemmi H. PMID: 20043121; PMCID: PMC2846616.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    24. JC virus mediates invasion and migration in colorectal metastasis. PLoS One. 2009 Dec 03; 4(12):e8146. Link A, Shin SK, Nagasaka T, Balaguer F, Koi M, Jung B, Boland CR, Goel A. PMID: 19997600; PMCID: PMC2781631.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    25. Analysis of fecal DNA methylation to detect gastrointestinal neoplasia. J Natl Cancer Inst. 2009 Sep 16; 101(18):1244-58. Nagasaka T, Tanaka N, Cullings HM, Sun DS, Sasamoto H, Uchida T, Koi M, Nishida N, Naomoto Y, Boland CR, Matsubara N, Goel A. PMID: 19700653; PMCID: PMC2762745.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansCellsPHPublic Health
    26. Genetic instability caused by loss of MutS homologue 3 in human colorectal cancer. Cancer Res. 2008 Oct 15; 68(20):8465-72. Haugen AC, Goel A, Yamada K, Marra G, Nguyen TP, Nagasaka T, Kanazawa S, Koike J, Kikuchi Y, Zhong X, Arita M, Shibuya K, Oshimura M, Hemmi H, Boland CR, Koi M. PMID: 18922920; PMCID: PMC2678948.
      View in: PubMed   Mentions: 94     Fields:    Translation:HumansCells
    27. Mutations in both KRAS and BRAF may contribute to the methylator phenotype in colon cancer. Gastroenterology. 2008 Jun; 134(7):1950-60, 1960.e1. Nagasaka T, Koi M, Kloor M, Gebert J, Vilkin A, Nishida N, Shin SK, Sasamoto H, Tanaka N, Matsubara N, Boland CR, Goel A. PMID: 18435933; PMCID: PMC2543132.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansCells
    28. The biochemical basis of microsatellite instability and abnormal immunohistochemistry and clinical behavior in Lynch syndrome: from bench to bedside. Fam Cancer. 2008; 7(1):41-52. Boland CR, Koi M, Chang DK, Carethers JM. PMID: 17636426; PMCID: PMC2847875.
      View in: PubMed   Mentions: 71     Fields:    Translation:HumansCells
    29. Role of p21waf1/cip1 in effects of oxaliplatin in colorectal cancer cells. Mol Cancer Ther. 2005 Oct; 4(10):1585-94. Hata T, Yamamoto H, Ngan CY, Koi M, Takagi A, Damdinsuren B, Yasui M, Fujie Y, Matsuzaki T, Hemmi H, Xu X, Kitani K, Seki Y, Takemasa I, Ikeda M, Sekimoto M, Matsuura N, Monden M. PMID: 16227409.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    30. Microsatellite status and immunohistochemical features of ovarian clear-cell carcinoma. Anticancer Res. 2005 Jul-Aug; 25(4):2785-8. Ueda H, Watanabe Y, Nakai H, Hemmi H, Koi M, Hoshiai H. PMID: 16080527.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    31. One-milliliter wet-digestion for inductively coupled plasma mass spectrometry (ICP-MS): determination of platinum-DNA adducts in cells treated with platinum(II) complexes. Anal Bioanal Chem. 2005 Aug; 382(7):1702-7. Yamada K, Kato N, Takagi A, Koi M, Hemmi H. PMID: 15959768.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    32. Hypersensitivity in DNA mismatch repair-deficient colon carcinoma cells to DNA polymerase reaction inhibitors. Cancer Lett. 2005 Mar 18; 220(1):85-93. Takahashi T, Min Z, Uchida I, Arita M, Watanabe Y, Koi M, Hemmi H. PMID: 15737691.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    33. Growth inhibition due to complementation of transforming growth factor-beta receptor type II-defect by human chromosome 3 transfer in human colorectal carcinoma cells. J Cell Physiol. 2001 Jun; 187(3):356-64. Miyafuji Y, Zhong X, Uchida I, Koi M, Hemmi H. PMID: 11319759.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    34. Complementation of an hMSH2 defect in human colorectal carcinoma cells by human chromosome 2 transfer. Mol Carcinog. 2000 Sep; 29(1):37-49. Watanabe Y, Haugen-Strano A, Umar A, Yamada K, Hemmi H, Kikuchi Y, Takano S, Shibata Y, Barrett JC, Kunkel TA, Koi M. PMID: 11020245.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansAnimalsCells
    35. Complementation of mismatch repair gene defects by chromosome transfer. Mutat Res. 1998 Jun 18; 402(1-2):15-22. Tindall KR, Glaab WE, Umar A, Risinger JI, Koi M, Barrett JC, Kunkel TA. PMID: 9675233.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    36. Rescue of targeted regions of mammalian chromosomes by in vivo recombination in yeast. Genome Res. 1998 Jun; 8(6):666-72. Kouprina N, Kawamoto K, Barrett JC, Larionov V, Koi M. PMID: 9647640; PMCID: PMC310736.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    37. Loss of heterozygosity at chromosome segment Xq25-26.1 in advanced human ovarian carcinomas. Genes Chromosomes Cancer. 1997 Nov; 20(3):234-42. Choi C, Cho S, Horikawa I, Berchuck A, Wang N, Cedrone E, Jhung SW, Lee JB, Kerr J, Chenevix-Trench G, Kim S, Barrett JC, Koi M. PMID: 9365830.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    38. Undectable expression of hMLH1 protein in sporadic colorectal cancer with replication error phenotype. Dis Colon Rectum. 1997 Oct; 40(10 Suppl):S23-8. Koike J, Yamada K, Takano S, Kikuchi Y, Hemmi H, Koi M, Tsujita K, Yanagita K, Yoshio T, Shimatake H. PMID: 9378008.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    39. Correction of hypermutability, N-methyl-N'-nitro-N-nitrosoguanidine resistance, and defective DNA mismatch repair by introducing chromosome 2 into human tumor cells with mutations in MSH2 and MSH6. Cancer Res. 1997 Sep 15; 57(18):3949-55. Umar A, Koi M, Risinger JI, Glaab WE, Tindall KR, Kolodner RD, Boland CR, Barrett JC, Kunkel TA. PMID: 9307278.
      View in: PubMed   Mentions: 59     Fields:    Translation:HumansCells
    40. Construction of chicken x human microcell hybrids for human gene targeting. Cytogenet Cell Genet. 1997; 76(1-2):72-6. Koi M, Lamb PW, Filatov L, Feinberg AP, Barrett JC. PMID: 9154132.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    41. Competency in mismatch repair prohibits clonal expansion of cancer cells treated with N-methyl-N'-nitro-N-nitrosoguanidine. J Clin Invest. 1996 Jul 01; 98(1):199-206. Carethers JM, Hawn MT, Chauhan DP, Luce MC, Marra G, Koi M, Boland CR. PMID: 8690794; PMCID: PMC507417.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansCells
    42. Loss of DNA mismatch repair in acquired resistance to cisplatin. Cancer Res. 1996 Jul 01; 56(13):3087-90. Aebi S, Kurdi-Haidar B, Gordon R, Cenni B, Zheng H, Fink D, Christen RD, Boland CR, Koi M, Fishel R, Howell SB. PMID: 8674066.
      View in: PubMed   Mentions: 125     Fields:    Translation:HumansCells
    43. Transcription-coupled repair deficiency and mutations in human mismatch repair genes. Science. 1996 Apr 26; 272(5261):557-60. Mellon I, Rajpal DK, Koi M, Boland CR, Champe GN. PMID: 8614807.
      View in: PubMed   Mentions: 70     Fields:    Translation:HumansCells
    44. Evidence for a connection between the mismatch repair system and the G2 cell cycle checkpoint. Cancer Res. 1995 Sep 01; 55(17):3721-5. Hawn MT, Umar A, Carethers JM, Marra G, Kunkel TA, Boland CR, Koi M. PMID: 7641183.
      View in: PubMed   Mentions: 84     Fields:    Translation:HumansCells
    45. Human chromosome 3 corrects mismatch repair deficiency and microsatellite instability and reduces N-methyl-N'-nitro-N-nitrosoguanidine tolerance in colon tumor cells with homozygous hMLH1 mutation. Cancer Res. 1994 Aug 15; 54(16):4308-12. Koi M, Umar A, Chauhan DP, Cherian SP, Carethers JM, Kunkel TA, Boland CR. PMID: 8044777.
      View in: PubMed   Mentions: 166     Fields:    Translation:HumansCells
    46. Simple purification of human chromosomes to homogeneity using muntjac hybrid cells. Nat Genet. 1994 May; 7(1):29-33. Lee JY, Koi M, Stanbridge EJ, Oshimura M, Kumamoto AT, Feinberg AP. PMID: 8075635.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    47. Tumor cell growth arrest caused by subchromosomal transferable DNA fragments from chromosome 11. Science. 1993 Apr 16; 260(5106):361-4. Koi M, Johnson LA, Kalikin LM, Little PF, Nakamura Y, Feinberg AP. PMID: 8469989.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansAnimalsCells
    48. Multiple tumor suppressor genes in multistep carcinogenesis. Tohoku J Exp Med. 1992 Oct; 168(2):149-52. Feinberg AP, Johnson LA, Law DJ, Kuehn SE, Steenman M, Williams BR, Thomas G, Boland CR, Rainier S, Koi M. PMID: 1339099.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    49. Transfer of a normal human chromosome 11 suppresses tumorigenicity of some but not all tumor cell lines. J Cell Biochem. 1990 Mar; 42(3):135-42. Oshimura M, Kugoh H, Koi M, Shimizu M, Yamada H, Satoh H, Barrett JC. PMID: 2318911.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    50. Restoration of radiation resistance in ataxia telangiectasia cells by the introduction of normal human chromosome 11. Mutat Res. 1990 Mar; 235(2):59-63. Komatsu K, Kodama S, Okumura Y, Koi M, Oshimura M. PMID: 2155385.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    51. Induction of cellular senescence in immortalized cells by human chromosome 1. Science. 1990 Feb 09; 247(4943):707-10. Sugawara O, Oshimura M, Koi M, Annab LA, Barrett JC. PMID: 2300822.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    52. Role of a tumor-suppressor gene in the negative control of anchorage-independent growth of Syrian hamster cells. Proc Natl Acad Sci U S A. 1989 Nov; 86(22):8773-7. Koi M, Afshari CA, Annab LA, Barrett JC. PMID: 2813423; PMCID: PMC298372.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    53. Construction of mouse A9 clones containing a single human chromosome tagged with neomycin-resistance gene via microcell fusion. Jpn J Cancer Res. 1989 May; 80(5):413-8. Koi M, Shimizu M, Morita H, Yamada H, Oshimura M. PMID: 2502516; PMCID: PMC5917765.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansAnimalsCells
    54. Construction of mouse A9 clones containing a single human chromosome (X/autosome translocation) via micro-cell fusion. Jpn J Cancer Res. 1989 Feb; 80(2):122-5. Koi M, Morita H, Shimizu M, Oshimura M. PMID: 2498246; PMCID: PMC5917704.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    55. Normal human chromosome 11 suppresses tumorigenicity of human cervical tumor cell line SiHa. Mol Carcinog. 1989; 2(1):12-21. Koi M, Morita H, Yamada H, Satoh H, Barrett JC, Oshimura M. PMID: 2730761.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    56. Role of chromosome loss in ras/myc-induced Syrian hamster tumors. Cancer Res. 1988 Mar 15; 48(6):1623-32. Oshimura M, Koi M, Ozawa N, Sugawara O, Lamb PW, Barrett JC. PMID: 2449958.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    57. Role of oncogenes and tumor suppressor genes in a multistep model of carcinogenesis. Symp Fundam Cancer Res. 1986; 39:45-56. Barrett JC, Oshimura M, Koi M. PMID: 3321309.
      View in: PubMed   Mentions: 6  Translation:HumansAnimals
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