 Lane Votapka
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| Title(s) | Sr Bioinfo Analyst, Chemistry and Biochemistry |
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| School | Vc-academic Affairs |
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| Address | 9500 Gilman Drive #
La Jolla CA 92093
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| vCard | Download vCard |
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 Bibliographic
Altmetrics Details
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.)
Click a Field or Translation tag to filter the publications.
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A Computational Assay that Explores the Hemagglutinin/Neuraminidase Functional Balance Reveals the Neuraminidase Secondary Site as a Novel Anti-Influenza Target. ACS Cent Sci. 2018 Nov 28; 4(11):1570-1577.
Amaro RE, Ieong PU, Huber G, Dommer A, Steven AC, Bush RM, Durrant JD, Votapka LW. PMID: 30555910.
View in: PubMed Mentions:
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SEEKR: Simulation Enabled Estimation of Kinetic Rates, A Computational Tool to Estimate Molecular Kinetics and Its Application to Trypsin-Benzamidine Binding. J Phys Chem B. 2017 04 20; 121(15):3597-3606.
Votapka LW, Jagger BR, Heyneman AL, Amaro RE. PMID: 28191969.
View in: PubMed Mentions: 13 Fields: Translation: Cells
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Two Relations to Estimate Membrane Permeability Using Milestoning. J Phys Chem B. 2016 08 25; 120(33):8606-16.
Votapka LW, Lee CT, Amaro RE. PMID: 27154639.
View in: PubMed Mentions: 10 Fields: Translation: Cells
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Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning. PLoS Comput Biol. 2015 Oct; 11(10):e1004381.
Votapka LW, Amaro RE. PMID: 26505480.
View in: PubMed Mentions: 16 Fields: Translation: Cells
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Bridging scales through multiscale modeling: a case study on protein kinase A. Front Physiol. 2015; 6:250.
Boras BW, Hirakis SP, Votapka LW, Malmstrom RD, Amaro RE, McCulloch AD. PMID: 26441670.
View in: PubMed Mentions:
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POVME 2.0: An Enhanced Tool for Determining Pocket Shape and Volume Characteristics. J Chem Theory Comput. 2014 Nov 11; 10(11):5047-5056.
Durrant JD, Votapka L, Sørensen J, Amaro RE. PMID: 25400521.
View in: PubMed Mentions: 64 Fields:
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Weighted Implementation of Suboptimal Paths (WISP): An Optimized Algorithm and Tool for Dynamical Network Analysis. J Chem Theory Comput. 2014 Feb 11; 10(2):511-517.
Van Wart AT, Durrant J, Votapka L, Amaro RE. PMID: 24803851.
View in: PubMed Mentions: 40 Fields:
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Multistructural hot spot characterization with FTProd. Bioinformatics. 2013 Feb 01; 29(3):393-4.
Votapka L, Amaro RE. PMID: 23202744.
View in: PubMed Mentions: 6 Fields: Translation: Cells
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Variable ligand- and receptor-binding hot spots in key strains of influenza neuraminidase. J Mol Genet Med. 2012; 6:293-300.
Votapka L, Demir O, Swift RV, Walker RC, Amaro RE. PMID: 22872804.
View in: PubMed Mentions:
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Mechanism of 150-cavity formation in influenza neuraminidase. Nat Commun. 2011 Jul 12; 2:388.
Amaro RE, Swift RV, Votapka L, Li WW, Walker RC, Bush RM. PMID: 21750542.
View in: PubMed Mentions: 40 Fields: Translation: Cells
This graph shows the total number of publications by year. To see the data as text, click here.
This graph shows the total number of publications by year. To return to the graph, click here.
| Year | Publications |
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| 2011 | 1 | | 2012 | 2 | | 2014 | 2 | | 2015 | 2 | | 2016 | 1 | | 2017 | 1 | | 2018 | 1 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
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