Jaideep Chakladar

Title(s)SRA 1, Herbert Wertheim School of Public Health & Human Longevity Science
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Clinical characteristics and comorbidities associated with SARS-CoV-2 breakthrough infection in the University of California Healthcare Systems. Am J Med Sci. 2023 08; 366(2):102-113. Hogarth M, John D, Li Y, Wang-Rodriguez J, Chakladar J, Li WT, Mehta SR, Jain S, Ongkeko WM. PMID: 37146904; PMCID: PMC10155464.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. Characterization of tRNA-Derived Fragments in Lung Squamous Cell Carcinoma with Respect to Tobacco Smoke. Int J Mol Sci. 2023 Mar 13; 24(6). Magesh S, Gande P, Yalamarty R, John D, Chakladar J, Li WT, Ongkeko WM. PMID: 36982573; PMCID: PMC10057801.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    3. Transcriptomic Analysis Reveals Dysregulation of the Mycobiome and Archaeome and Distinct Oncogenic Characteristics according to Subtype and Gender in Papillary Thyroid Carcinoma. Int J Mol Sci. 2023 Feb 05; 24(4). John D, Yalamarty R, Barakchi A, Chen T, Chakladar J, Li WT, Ongkeko WM. PMID: 36834564; PMCID: PMC9967748.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    4. Effects of Human Papilloma Virus E6/E7 Oncoproteins on Genomic Structure in Head and Neck Squamous Cell Carcinoma. Cancers (Basel). 2022 Dec 15; 14(24). Uzelac M, Barakchi A, Beldona V, John D, Chakladar J, Li WT, Ongkeko WM. PMID: 36551675.
      View in: PubMed   Mentions:
    5. The Intratumor Bacterial and Fungal Microbiome Is Characterized by HPV, Smoking, and Alcohol Consumption in Head and Neck Squamous Cell Carcinoma. Int J Mol Sci. 2022 Oct 31; 23(21). Chakladar J, John D, Magesh S, Uzelac M, Li WT, Dereschuk K, Apostol L, Brumund KT, Rodriguez JW, Ongkeko WM. PMID: 36362038; PMCID: PMC9655846.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    6. Archaea Microbiome Dysregulated Genes and Pathways as Molecular Targets for Lung Adenocarcinoma and Squamous Cell Carcinoma. Int J Mol Sci. 2022 Sep 30; 23(19). Uzelac M, Li Y, Chakladar J, Li WT, Ongkeko WM. PMID: 36232866; PMCID: PMC9570029.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    7. Medical student's perception of the COVID-19 pandemic effect on their education and well-being: a cross-sectional survey in the United States. BMC Med Educ. 2022 Mar 05; 22(1):149. Chakladar J, Diomino A, Li WT, Tsai JC, Krishnan AR, Zou AE, Kharidia K, Baig FA, Householder S, Kuo SZ, Chandrasekar S, Chang EY, Ongkeko WM. PMID: 35248030; PMCID: PMC8897763.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCellsPHPublic Health
    8. Enhancer RNA Profiling in Smoking and HPV Associated HNSCC Reveals Associations to Key Oncogenes. Int J Mol Sci. 2021 Nov 21; 22(22). Shende N, Xu J, Li WT, Liu J, Chakladar J, Brumund KT, Ongkeko WM. PMID: 34830428; PMCID: PMC8625218.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    9. Analysis of the immune landscape in virus-induced cancers using a novel integrative mechanism discovery approach. Comput Struct Biotechnol J. 2021; 19:6240-6254. Wong LM, Li WT, Shende N, Tsai JC, Ma J, Chakladar J, Gnanasekar A, Qu Y, Dereschuk K, Wang-Rodriguez J, Ongkeko WM. PMID: 34900135; PMCID: PMC8636736.
      View in: PubMed   Mentions: 3  
    10. Tobacco Smoke and Electronic Cigarette Vapor Alter Enhancer RNA Expression That Can Regulate the Pathogenesis of Lung Squamous Cell Carcinoma. Cancers (Basel). 2021 Aug 23; 13(16). Tsai JC, Saad OA, Magesh S, Xu J, Lee AC, Li WT, Chakladar J, Fuster MM, Chang EY, Wang-Rodriguez J, Ongkeko WM. PMID: 34439379; PMCID: PMC8391195.
      View in: PubMed   Mentions: 2  
    11. The Bladder Microbiome Is Associated with Epithelial-Mesenchymal Transition in Muscle Invasive Urothelial Bladder Carcinoma. Cancers (Basel). 2021 Jul 21; 13(15). Li WT, Iyangar AS, Reddy R, Chakladar J, Bhargava V, Sakamoto K, Ongkeko WM, Rajasekaran M. PMID: 34359550; PMCID: PMC8344975.
      View in: PubMed   Mentions: 16  
    12. Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis. Cells. 2021 06 10; 10(6). Dereschuk K, Apostol L, Ranjan I, Chakladar J, Li WT, Rajasekaran M, Chang EY, Ongkeko WM. PMID: 34200572; PMCID: PMC8226556.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    13. COVID-19 Severity Potentially Modulated by Cardiovascular-Disease-Associated Immune Dysregulation. Viruses. 2021 05 28; 13(6). Lee AC, Castaneda G, Li WT, Chen C, Shende N, Chakladar J, Taub PR, Chang EY, Ongkeko WM. PMID: 34071557; PMCID: PMC8228164.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    14. The intratumor microbiome predicts prognosis across gender and subtypes in papillary thyroid carcinoma. Comput Struct Biotechnol J. 2021; 19:1986-1997. Gnanasekar A, Castaneda G, Iyangar A, Magesh S, Perez D, Chakladar J, Li WT, Bouvet M, Chang EY, Ongkeko WM. PMID: 33995898; PMCID: PMC8085784.
      View in: PubMed   Mentions: 24  
    15. Identification and Characterization of the Intra-Articular Microbiome in the Osteoarthritic Knee. Int J Mol Sci. 2020 Nov 16; 21(22). Tsai JC, Casteneda G, Lee A, Dereschuk K, Li WT, Chakladar J, Lombardi AF, Ongkeko WM, Chang EY. PMID: 33207573; PMCID: PMC7697780.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    16. Using machine learning of clinical data to diagnose COVID-19: a systematic review and meta-analysis. BMC Med Inform Decis Mak. 2020 09 29; 20(1):247. Li WT, Ma J, Shende N, Castaneda G, Chakladar J, Tsai JC, Apostol L, Honda CO, Xu J, Wong LM, Zhang T, Lee A, Gnanasekar A, Honda TK, Kuo SZ, Yu MA, Chang EY, Rajasekaran MR, Ongkeko WM. PMID: 32993652; PMCID: PMC7522928.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansCellsPHPublic Health
    17. The Pancreatic Microbiome is Associated with Carcinogenesis and Worse Prognosis in Males and Smokers. Cancers (Basel). 2020 Sep 18; 12(9). Chakladar J, Kuo SZ, Castaneda G, Li WT, Gnanasekar A, Yu MA, Chang EY, Wang XQ, Ongkeko WM. PMID: 32962112; PMCID: PMC7565819.
      View in: PubMed   Mentions: 29  
    18. Tobacco, but Not Nicotine and Flavor-Less Electronic Cigarettes, Induces ACE2 and Immune Dysregulation. Int J Mol Sci. 2020 Jul 31; 21(15). Lee AC, Chakladar J, Li WT, Chen C, Chang EY, Wang-Rodriguez J, Ongkeko WM. PMID: 32752138; PMCID: PMC7432384.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCellsPHPublic Health
    19. The Liver Microbiome Is Implicated in Cancer Prognosis and Modulated by Alcohol and Hepatitis B. Cancers (Basel). 2020 Jun 21; 12(6). Chakladar J, Wong LM, Kuo SZ, Li WT, Yu MA, Chang EY, Wang XQ, Ongkeko WM. PMID: 32575865; PMCID: PMC7353057.
      View in: PubMed   Mentions: 11  
    20. Smoking-Mediated Upregulation of the Androgen Pathway Leads to Increased SARS-CoV-2 Susceptibility. Int J Mol Sci. 2020 May 21; 21(10). Chakladar J, Shende N, Li WT, Rajasekaran M, Chang EY, Ongkeko WM. PMID: 32455539; PMCID: PMC7279323.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCellsPHPublic Health
    21. Papillary Thyroid Carcinoma Variants are Characterized by Co-dysregulation of Immune and Cancer Associated Genes. Cancers (Basel). 2019 Aug 15; 11(8). Chakladar J, Li WT, Bouvet M, Chang EY, Wang-Rodriguez J, Ongkeko WM. PMID: 31443155; PMCID: PMC6721495.
      View in: PubMed   Mentions: 11  
    22. Transcriptional Profiling of C. albicans in a Two Species Biofilm with Rothia dentocariosa. Front Cell Infect Microbiol. 2017; 7:311. Uppuluri P, Busscher HJ, Chakladar J, van der Mei HC, Chaffin WL. PMID: 28752078; PMCID: PMC5508013.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
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