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Martin Yanofsky

TitleProfessor
InstitutionUniversity of California San Diego
DepartmentCell and Developmental Biology
Address9500 Gilman Drive #0116
La Jolla CA 92093
Phone858-534-7299
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    Collapse Research 
    Collapse Research Activities and Funding
    A novel genetic network controlling meristem initiation and stem cell patterning
    NIH/NIGMS R01GM112976Jul 1, 2015 - Jun 30, 2019
    Role: Principal Investigator
    PETAL A1 AND REGULATING FLOWERING AND ARABIDOPSIS
    NIH/NIGMS R01GM055328Mar 1, 1997 - Feb 28, 2002
    Role: Principal Investigator

    Collapse Bibliographic 
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Balanzà V, Martínez-Fernández I, Sato S, Yanofsky M, Kaufmann K, Angenent GC, Bemer M, Ferrándiz C. Genetic control of meristem arrest and life span in Arabidopsis by a FRUITFULL-APETALA2 pathway. Nat Commun. 2018 02 08; 9(1):565. PMID: 29422669.
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    2. Rodríguez-Cazorla E, Ortuño-Miquel S, Candela H, Bailey-Steinitz LJ, Yanofsky M, Martínez-Laborda A, Ripoll JJ, Vera A. Ovule identity mediated by pre-mRNA processing in Arabidopsis. PLoS Genet. 2018 Jan; 14(1):e1007182. PMID: 29329291.
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    3. Díaz-Manzano FE, Cabrera J, Ripoll JJ, Del Olmo I, Andrés MF, Silva AC, Barcala M, Sánchez M, Ruíz-Ferrer V, de Almeida-Engler J, Yanofsky M, Piñeiro M, Jarillo JA, Fenoll C, Escobar C. A role for the gene regulatory module microRNA172/TARGET OF EARLY ACTIVATION TAGGED 1/FLOWERING LOCUS T (miRNA172/TOE1/FT) in the feeding sites induced by Meloidogyne javanica in Arabidopsis thaliana. New Phytol. 2018 Jan; 217(2):813-827. PMID: 29105090.
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    4. Gaillochet C, Stiehl T, Wenzl C, Ripoll JJ, Bailey-Steinitz LJ, Li L, Pfeiffer A, Miotk A, Hakenjos JP, Forner J, Yanofsky M, Marciniak-Czochra A, Lohmann JU. Control of plant cell fate transitions by transcriptional and hormonal signals. Elife. 2017 Oct 23; 6. PMID: 29058667.
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    5. Reyes-Olalde JI, Zúñiga-Mayo VM, Serwatowska J, Chavez Montes RA, Lozano-Sotomayor P, Herrera-Ubaldo H, Gonzalez-Aguilera KL, Ballester P, Ripoll JJ, Ezquer I, Paolo D, Heyl A, Colombo L, Yanofsky M, Ferrandiz C, Marsch-Martínez N, de Folter S. The bHLH transcription factor SPATULA enables cytokinin signaling, and both activate auxin biosynthesis and transport genes at the medial domain of the gynoecium. PLoS Genet. 2017 Apr; 13(4):e1006726. PMID: 28388635.
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    6. Cosio C, Ranocha P, Francoz E, Burlat V, Zheng Y, Perry SE, Ripoll JJ, Yanofsky M, Dunand C. The class III peroxidase PRX17 is a direct target of the MADS-box transcription factor AGAMOUS-LIKE15 (AGL15) and participates in lignified tissue formation. New Phytol. 2017 Jan; 213(1):250-263. PMID: 27513887.
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    7. Rodríguez-Cazorla E, Andújar A, Ripoll JJ, Bailey LJ, Martínez-Laborda A, Yanofsky M, Vera A. 3' Rapid Amplification of cDNA Ends (3' RACE) Using Arabidopsis Samples. Bio Protoc. 2015 Oct 05; 5(19):e1604. PMID: 27034968.
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    8. José Ripoll J, Bailey LJ, Mai QA, Wu SL, Hon CT, Chapman EJ, Ditta GS, Estelle M, Yanofsky M. microRNA regulation of fruit growth. Nat Plants. 2015 Mar 30; 1(4):15036. PMID: 27247036.
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    9. Rodríguez-Cazorla E, Ripoll JJ, Andújar A, Bailey LJ, Martínez-Laborda A, Yanofsky M, Vera A. K-homology nuclear ribonucleoproteins regulate floral organ identity and determinacy in arabidopsis. PLoS Genet. 2015 Feb; 11(2):e1004983. PMID: 25658099; PMCID: PMC4450054.
    10. Crawford BC, Sewell J, Golembeski G, Roshan C, Long JA, Yanofsky M. Plant development. Genetic control of distal stem cell fate within root and embryonic meristems. Science. 2015 Feb 06; 347(6222):655-9. PMID: 25612610.
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    11. González-Reig S, Ripoll JJ, Vera A, Yanofsky M, Martínez-Laborda A. Antagonistic gene activities determine the formation of pattern elements along the mediolateral axis of the Arabidopsis fruit. PLoS Genet. 2012; 8(11):e1003020. PMID: 23133401; PMCID: PMC3486860.
    12. Romera-Branchat M, Ripoll JJ, Yanofsky M, Pelaz S. The WOX13 homeobox gene promotes replum formation in the Arabidopsis thaliana fruit. Plant J. 2013 Jan; 73(1):37-49. PMID: 22946675.
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    13. Ripoll JJ, Roeder AH, Ditta GS, Yanofsky M. A novel role for the floral homeotic gene APETALA2 during Arabidopsis fruit development. Development. 2011 Dec; 138(23):5167-76. PMID: 22031547.
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    14. Crawford BC, Yanofsky M. HALF FILLED promotes reproductive tract development and fertilization efficiency in Arabidopsis thaliana. Development. 2011 Jul; 138(14):2999-3009. PMID: 21693516.
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    15. Girin T, Stephenson P, Goldsack CM, Kempin SA, Perez A, Pires N, Sparrow PA, Wood TA, Yanofsky M, Østergaard L. Brassicaceae INDEHISCENT genes specify valve margin cell fate and repress replum formation. Plant J. 2010 Jul; 63(2):329-38. PMID: 20444234.
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    16. Liljegren SJ, Leslie ME, Darnielle L, Lewis MW, Taylor SM, Luo R, Geldner N, Chory J, Randazzo PA, Yanofsky M, Ecker JR. Regulation of membrane trafficking and organ separation by the NEVERSHED ARF-GAP protein. Development. 2009 Jun; 136(11):1909-18. PMID: 19429787; PMCID: PMC2680113.
    17. Sorefan K, Girin T, Liljegren SJ, Ljung K, Robles P, Galván-Ampudia CS, Offringa R, Friml J, Yanofsky M, Østergaard L. A regulated auxin minimum is required for seed dispersal in Arabidopsis. Nature. 2009 May 28; 459(7246):583-6. PMID: 19478783.
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    18. Trigueros M, Navarrete-Gómez M, Sato S, Christensen SK, Pelaz S, Weigel D, Yanofsky M, Ferrándiz C. The NGATHA genes direct style development in the Arabidopsis gynoecium. Plant Cell. 2009 May; 21(5):1394-409. PMID: 19435937; PMCID: PMC2700528.
    19. Crawford BC, Yanofsky M. The formation and function of the female reproductive tract in flowering plants. Curr Biol. 2008 Oct 28; 18(20):R972-8. PMID: 18957258.
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    20. Gremski K, Ditta G, Yanofsky M. The HECATE genes regulate female reproductive tract development in Arabidopsis thaliana. Development. 2007 Oct; 134(20):3593-601. PMID: 17855426.
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    21. Crawford BC, Ditta G, Yanofsky M. The NTT gene is required for transmitting-tract development in carpels of Arabidopsis thaliana. Curr Biol. 2007 Jul 03; 17(13):1101-8. PMID: 17600712.
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    22. Dinneny JR, Weigel D, Yanofsky M. NUBBIN and JAGGED define stamen and carpel shape in Arabidopsis. Development. 2006 May; 133(9):1645-55. PMID: 16554365.
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    23. Roeder AH, Yanofsky M. Fruit development in Arabidopsis. Arabidopsis Book. 2006; 4:e0075. PMID: 22303227; PMCID: PMC3243326.
    24. Østergaard L, Kempin SA, Bies D, Klee HJ, Yanofsky M. Pod shatter-resistant Brassica fruit produced by ectopic expression of the FRUITFULL gene. Plant Biotechnol J. 2006 Jan; 4(1):45-51. PMID: 17177784.
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    25. Dinneny JR, Weigel D, Yanofsky M. A genetic framework for fruit patterning in Arabidopsis thaliana. Development. 2005 Nov; 132(21):4687-96. PMID: 16192305.
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    26. Dinneny JR, Yanofsky M. Drawing lines and borders: how the dehiscent fruit of Arabidopsis is patterned. Bioessays. 2005 Jan; 27(1):42-9. PMID: 15612035.
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    27. Ditta G, Pinyopich A, Robles P, Pelaz S, Yanofsky M. The SEP4 gene of Arabidopsis thaliana functions in floral organ and meristem identity. Curr Biol. 2004 Nov 09; 14(21):1935-40. PMID: 15530395.
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    28. Dinneny JR, Yanofsky M. Floral development: an ABC gene chips in downstream. Curr Biol. 2004 Oct 05; 14(19):R840-1. PMID: 15458662.
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    29. Østergaard L, Yanofsky M. Establishing gene function by mutagenesis in Arabidopsis thaliana. Plant J. 2004 Sep; 39(5):682-96. PMID: 15315632.
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    30. Liljegren SJ, Roeder AH, Kempin SA, Gremski K, Østergaard L, Guimil S, Reyes DK, Yanofsky M. Control of fruit patterning in Arabidopsis by INDEHISCENT. Cell. 2004 Mar 19; 116(6):843-53. PMID: 15035986.
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    31. Dinneny JR, Yadegari R, Fischer RL, Yanofsky M, Weigel D. The role of JAGGED in shaping lateral organs. Development. 2004 Mar; 131(5):1101-10. PMID: 14973282.
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    32. Dinneny JR, Yanofsky M. Vascular patterning: xylem or phloem? Curr Biol. 2004 Feb 03; 14(3):R112-4. PMID: 14986642.
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    33. Rhew RC, Østergaard L, Saltzman ES, Yanofsky M. Genetic control of methyl halide production in Arabidopsis. Curr Biol. 2003 Oct 14; 13(20):1809-13. PMID: 14561407.
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    34. Favaro R, Pinyopich A, Battaglia R, Kooiker M, Borghi L, Ditta G, Yanofsky M, Kater MM, Colombo L. MADS-box protein complexes control carpel and ovule development in Arabidopsis. Plant Cell. 2003 Nov; 15(11):2603-11. PMID: 14555696; PMCID: PMC280564.
    35. Roeder AH, Ferrándiz C, Yanofsky M. The role of the REPLUMLESS homeodomain protein in patterning the Arabidopsis fruit. Curr Biol. 2003 Sep 16; 13(18):1630-5. PMID: 13678595.
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    36. Pinyopich A, Ditta GS, Savidge B, Liljegren SJ, Baumann E, Wisman E, Yanofsky M. Assessing the redundancy of MADS-box genes during carpel and ovule development. Nature. 2003 Jul 03; 424(6944):85-8. PMID: 12840762.
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    37. Michaels SD, Ditta G, Gustafson-Brown C, Pelaz S, Yanofsky M, Amasino RM. AGL24 acts as a promoter of flowering in Arabidopsis and is positively regulated by vernalization. Plant J. 2003 Mar; 33(5):867-74. PMID: 12609028.
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    38. Beachy R, Bennetzen JL, Chassy BM, Chrispeels M, Chory J, Ecker JR, Noel JP, Kay SA, Dean C, Lamb C, Jones J, Santerre CR, Schroeder JI, Umen J, Yanofsky M, Wessler S, Zhao Y, Parrott W. Divergent perspectives on GM food. Nat Biotechnol. 2002 Dec; 20(12):1195-6; author reply 1197. PMID: 12454665.
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    39. Burgeff C, Liljegren SJ, Tapia-López R, Yanofsky M, Alvarez-Buylla ER. MADS-box gene expression in lateral primordia, meristems and differentiated tissues of Arabidopsis thaliana roots. Planta. 2002 Jan; 214(3):365-72. PMID: 11855641.
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    40. Roeder AH, Yanofsky M. Unraveling the mystery of double flowers. Dev Cell. 2001 Jul; 1(1):4-6. PMID: 11703916.
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    41. Pelaz S, Gustafson-Brown C, Kohalmi SE, Crosby WL, Yanofsky M. APETALA1 and SEPALLATA3 interact to promote flower development. Plant J. 2001 May; 26(4):385-94. PMID: 11439126.
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    42. Ng M, Yanofsky M. Activation of the Arabidopsis B class homeotic genes by APETALA1. Plant Cell. 2001 Apr; 13(4):739-53. PMID: 11283333; PMCID: PMC135542.
    43. Ng M, Yanofsky M. Function and evolution of the plant MADS-box gene family. Nat Rev Genet. 2001 Mar; 2(3):186-95. PMID: 11256070.
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    44. Pelaz S, Tapia-López R, Alvarez-Buylla ER, Yanofsky M. Conversion of leaves into petals in Arabidopsis. Curr Biol. 2001 Feb 06; 11(3):182-4. PMID: 11231153.
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    45. Alvarez-Buylla ER, Liljegren SJ, Pelaz S, Gold SE, Burgeff C, Ditta GS, Vergara-Silva F, Yanofsky M. MADS-box gene evolution beyond flowers: expression in pollen, endosperm, guard cells, roots and trichomes. Plant J. 2000 Nov; 24(4):457-66. PMID: 11115127.
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    46. Sessions A, Yanofsky M, Weigel D. Cell-cell signaling and movement by the floral transcription factors LEAFY and APETALA1. Science. 2000 Aug 04; 289(5480):779-82. PMID: 10926540.
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    47. Ferrándiz C, Liljegren SJ, Yanofsky M. Negative regulation of the SHATTERPROOF genes by FRUITFULL during Arabidopsis fruit development. Science. 2000 Jul 21; 289(5478):436-8. PMID: 10903201.
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    48. Samach A, Onouchi H, Gold SE, Ditta GS, Schwarz-Sommer Z, Yanofsky M, Coupland G. Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis. Science. 2000 Jun 02; 288(5471):1613-6. PMID: 10834834.
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    49. Pelaz S, Ditta GS, Baumann E, Wisman E, Yanofsky M. B and C floral organ identity functions require SEPALLATA MADS-box genes. Nature. 2000 May 11; 405(6783):200-3. PMID: 10821278.
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    50. Alvarez-Buylla ER, Pelaz S, Liljegren SJ, Gold SE, Burgeff C, Ditta GS, Ribas de Pouplana L, Martínez-Castilla L, Yanofsky M. An ancestral MADS-box gene duplication occurred before the divergence of plants and animals. Proc Natl Acad Sci U S A. 2000 May 09; 97(10):5328-33. PMID: 10805792; PMCID: PMC25828.
    51. Liljegren SJ, Ditta GS, Eshed Y, Savidge B, Bowman JL, Yanofsky M. SHATTERPROOF MADS-box genes control seed dispersal in Arabidopsis. Nature. 2000 Apr 13; 404(6779):766-70. PMID: 10783890.
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    52. Weigel D, Ahn JH, Blázquez MA, Borevitz JO, Christensen SK, Fankhauser C, Ferrándiz C, Kardailsky I, Malancharuvil EJ, Neff MM, Nguyen JT, Sato S, Wang ZY, Xia Y, Dixon RA, Harrison MJ, Lamb CJ, Yanofsky M, Chory J. Activation tagging in Arabidopsis. Plant Physiol. 2000 Apr; 122(4):1003-13. PMID: 10759496; PMCID: PMC1539247.
    53. Ambrose BA, Lerner DR, Ciceri P, Padilla CM, Yanofsky M, Schmidt RJ. Molecular and genetic analyses of the silky1 gene reveal conservation in floral organ specification between eudicots and monocots. Mol Cell. 2000 Mar; 5(3):569-79. PMID: 10882141.
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    54. Ng M, Yanofsky M. Three ways to learn the ABCs. Curr Opin Plant Biol. 2000 Feb; 3(1):47-52. PMID: 10679448.
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    55. Ferrándiz C, Gu Q, Martienssen R, Yanofsky M. Redundant regulation of meristem identity and plant architecture by FRUITFULL, APETALA1 and CAULIFLOWER. Development. 2000 Feb; 127(4):725-34. PMID: 10648231.
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    56. Sessions A, Weigel D, Yanofsky M. The Arabidopsis thaliana MERISTEM LAYER 1 promoter specifies epidermal expression in meristems and young primordia. Plant J. 1999 Oct; 20(2):259-63. PMID: 10571886.
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    57. Liljegren SJ, Gustafson-Brown C, Pinyopich A, Ditta GS, Yanofsky M. Interactions among APETALA1, LEAFY, and TERMINAL FLOWER1 specify meristem fate. Plant Cell. 1999 Jun; 11(6):1007-18. PMID: 10368173; PMCID: PMC144247.
    58. Sessions A, Yanofsky M. Dorsoventral patterning in plants. Genes Dev. 1999 May 01; 13(9):1051-4. PMID: 10323856.
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    59. Ferrándiz C, Pelaz S, Yanofsky M. Control of carpel and fruit development in Arabidopsis. Annu Rev Biochem. 1999; 68:321-54. PMID: 10872453.
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    60. Veit B, Briggs SP, Schmidt RJ, Yanofsky M, Hake S. Regulation of leaf initiation by the terminal ear 1 gene of maize. Nature. 1998 May 14; 393(6681):166-8. PMID: 9603518.
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    61. Sessions A, Yanofsky M, Weigel D. Patterning the floral meristem. Semin Cell Dev Biol. 1998 Apr; 9(2):221-6. PMID: 9599419.
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    62. Gu Q, Ferrándiz C, Yanofsky M, Martienssen R. The FRUITFULL MADS-box gene mediates cell differentiation during Arabidopsis fruit development. Development. 1998 Apr; 125(8):1509-17. PMID: 9502732.
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    63. Kempin SA, Liljegren SJ, Block LM, Rounsley SD, Yanofsky M, Lam E. Targeted disruption in Arabidopsis. Nature. 1997 Oct 23; 389(6653):802-3. PMID: 9349810.
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    64. Hempel FD, Weigel D, Mandel MA, Ditta G, Zambryski PC, Feldman LJ, Yanofsky M. Floral determination and expression of floral regulatory genes in Arabidopsis. Development. 1997 Oct; 124(19):3845-53. PMID: 9367440.
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    65. Liljegren SJ, Yanofsky M. Genetic control of shoot and flower meristem behavior. Curr Opin Cell Biol. 1996 Dec; 8(6):865-9. PMID: 8939670.
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    66. Mena M, Ambrose BA, Meeley RB, Briggs SP, Yanofsky M, Schmidt RJ. Diversification of C-function activity in maize flower development. Science. 1996 Nov 29; 274(5292):1537-40. PMID: 8929416.
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    67. Mena M, Mandel MA, Lerner DR, Yanofsky M, Schmidt RJ. A characterization of the MADS-box gene family in maize. Plant J. 1995 Dec; 8(6):845-54. PMID: 8580958.
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    68. Mandel MA, Yanofsky M. The Arabidopsis AGL8 MADS box gene is expressed in inflorescence meristems and is negatively regulated by APETALA1. Plant Cell. 1995 Nov; 7(11):1763-71. PMID: 8535133; PMCID: PMC161036.
    69. Mandel MA, Yanofsky M. A gene triggering flower formation in Arabidopsis. Nature. 1995 Oct 12; 377(6549):522-4. PMID: 7566148.
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    70. Rounsley SD, Ditta GS, Yanofsky M. Diverse roles for MADS box genes in Arabidopsis development. Plant Cell. 1995 Aug; 7(8):1259-69. PMID: 7549482; PMCID: PMC160949.
    71. Savidge B, Rounsley SD, Yanofsky M. Temporal relationship between the transcription of two Arabidopsis MADS box genes and the floral organ identity genes. Plant Cell. 1995 Jun; 7(6):721-33. PMID: 7647563; PMCID: PMC160822.
    72. Purugganan MD, Rounsley SD, Schmidt RJ, Yanofsky M. Molecular evolution of flower development: diversification of the plant MADS-box regulatory gene family. Genetics. 1995 May; 140(1):345-56. PMID: 7635298; PMCID: PMC1206560.
    73. Kempin SA, Savidge B, Yanofsky M. Molecular basis of the cauliflower phenotype in Arabidopsis. Science. 1995 Jan 27; 267(5197):522-5. PMID: 7824951.
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    74. Chung YY, Kim SR, Finkel D, Yanofsky M, An G. Early flowering and reduced apical dominance result from ectopic expression of a rice MADS box gene. Plant Mol Biol. 1994 Oct; 26(2):657-65. PMID: 7948920.
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    75. Pnueli L, Hareven D, Rounsley SD, Yanofsky M, Lifschitz E. Isolation of the tomato AGAMOUS gene TAG1 and analysis of its homeotic role in transgenic plants. Plant Cell. 1994 Feb; 6(2):163-73. PMID: 7908549; PMCID: PMC160424.
    76. Gustafson-Brown C, Savidge B, Yanofsky M. Regulation of the arabidopsis floral homeotic gene APETALA1. Cell. 1994 Jan 14; 76(1):131-43. PMID: 7506995.
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    77. Kempin SA, Mandel MA, Yanofsky M. Conversion of perianth into reproductive organs by ectopic expression of the tobacco floral homeotic gene NAG1. Plant Physiol. 1993 Dec; 103(4):1041-6. PMID: 7507255; PMCID: PMC159087.
    78. Schmidt RJ, Veit B, Mandel MA, Mena M, Hake S, Yanofsky M. Identification and molecular characterization of ZAG1, the maize homolog of the Arabidopsis floral homeotic gene AGAMOUS. Plant Cell. 1993 Jul; 5(7):729-37. PMID: 8103379; PMCID: PMC160311.
    79. Mandel MA, Gustafson-Brown C, Savidge B, Yanofsky M. Molecular characterization of the Arabidopsis floral homeotic gene APETALA1. Nature. 1992 Nov 19; 360(6401):273-7. PMID: 1359429.
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    80. Mandel MA, Bowman JL, Kempin SA, Ma H, Meyerowitz EM, Yanofsky M. Manipulation of flower structure in transgenic tobacco. Cell. 1992 Oct 02; 71(1):133-43. PMID: 1356631.
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    81. Ma H, Yanofsky M, Klee HJ, Bowman JL, Meyerowitz EM. Vectors for plant transformation and cosmid libraries. Gene. 1992 Aug 15; 117(2):161-7. PMID: 1639265.
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    82. Weigel D, Alvarez J, Smyth DR, Yanofsky M, Meyerowitz EM. LEAFY controls floral meristem identity in Arabidopsis. Cell. 1992 May 29; 69(5):843-59. PMID: 1350515.
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    83. Palme K, Hesse T, Campos N, Garbers C, Yanofsky M, Schell J. Molecular analysis of an auxin binding protein gene located on chromosome 4 of Arabidopsis. Plant Cell. 1992 Feb; 4(2):193-201. PMID: 1321684; PMCID: PMC160120.
    84. Ma H, Yanofsky M, Meyerowitz EM. AGL1-AGL6, an Arabidopsis gene family with similarity to floral homeotic and transcription factor genes. Genes Dev. 1991 Mar; 5(3):484-95. PMID: 1672119.
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    85. Yanofsky M, Ma H, Bowman JL, Drews GN, Feldmann KA, Meyerowitz EM. The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors. Nature. 1990 Jul 05; 346(6279):35-9. PMID: 1973265.
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    86. Ma H, Yanofsky M, Meyerowitz EM. Molecular cloning and characterization of GPA1, a G protein alpha subunit gene from Arabidopsis thaliana. Proc Natl Acad Sci U S A. 1990 May; 87(10):3821-5. PMID: 2111018; PMCID: PMC53995.