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Thomas Pranzatelli

Title(s)Postdoctoral Scholar, Ob/Gyn & Reproductive sciences
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Deconvolution of cell types and states in spatial multiomics utilizing TACIT. Nat Commun. 2025 Apr 21; 16(1):3747. Huynh KLA, Tyc KM, Matuck BF, Easter QT, Pratapa A, Kumar NV, Pérez P, Kulchar RJ, Pranzatelli TJF, de Souza D, Weaver TM, Qu X, Soares Junior LAV, Dolhnokoff M, Kleiner DE, Hewitt SM, da Silva LFF, Rocha VG, Warner BM, Byrd KM, Liu J. PMID: 40258827; PMCID: PMC12012066.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    2. Inhibition of JAK-STAT pathway corrects salivary gland inflammation and interferon driven immune activation in Sjögren's disease. Ann Rheum Dis. 2024 Jul 15; 83(8):1034-1047. Gupta S, Yamada E, Nakamura H, Perez P, Pranzatelli TJ, Dominick K, Jang SI, Abed M, Martin D, Burbelo P, Zheng C, French B, Alevizos I, Khavandgar Z, Beach M, Pelayo E, Walitt B, Hasni S, Kaplan MJ, Tandon M, Magone MT, Kleiner DE, Chiorini JA, Baer A, Warner BM. PMID: 38527764; PMCID: PMC11250564.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    3. GZMK+CD8+ T cells Target A Specific Acinar Cell Type in Sjögren's Disease. Res Sq. 2024 Jul 11. Pranzatelli TJF, Perez P, Ku A, Matuck B, Huynh K, Sakai S, Abed M, Jang SI, Yamada E, Dominick K, Ahmed Z, Oliver A, Wasikowski R, Easter QT, Baer AN, Pelayo E, Khavandgar Z, Kleiner DE, Magone MT, Gupta S, Lessard C, Farris AD, Burbelo PD, Martin D, Morell RJ, Zheng C, Rachmaninoff N, Maldonado-Ortiz J, Qu X, Aure M, Dezfulian MH, Lake R, Teichmann S, Barber DL, Tsoi LC, Sowalsky AG, Tyc KM, Liu J, Gudjonsson J, Byrd KM, Johnson PLF, Chiorini JA, Warner BM. PMID: 38196575; PMCID: PMC10775371.
      View in: PubMed   Mentions: 3  
    4. Spatial Deconvolution of Cell Types and Cell States at Scale Utilizing TACIT. Res Sq. 2024 Jun 27. Huynh KLA, Tyc KM, Matuck BF, Easter QT, Pratapa A, Kumar NV, Pérez P, Kulchar RJ, Pranzatelli TJF, de Souza D, Weaver TM, Qu X, Soares Junior LAV, Dolhnokoff M, Kleiner DE, Hewitt SM, Ferraz da Silva LF, Rocha VG, Warner BM, Byrd KM, Liu J. PMID: 38978567; PMCID: PMC11230516.
      View in: PubMed   Mentions:
    5. Spatial Deconvolution of Cell Types and Cell States at Scale Utilizing TACIT. bioRxiv. 2024 Jun 03. Huynh KLA, Tyc KM, Matuck BF, Easter QT, Pratapa A, Kumar NV, Pérez P, Kulchar R, Pranzatelli T, de Souza D, Weaver TM, Qu X, Valente Soares LA, Dolhnokoff M, Kleiner DE, Hewitt SM, da Silva LFF, Rocha VG, Warner BM, Byrd KM, Liu J. PMID: 38895230; PMCID: PMC11185514.
      View in: PubMed   Mentions:
    6. TScan-II: A genome-scale platform for the de novo identification of CD4+ T cell epitopes. Cell. 2023 12 07; 186(25):5569-5586.e21. Dezfulian MH, Kula T, Pranzatelli T, Kamitaki N, Meng Q, Khatri B, Perez P, Xu Q, Chang A, Kohlgruber AC, Leng Y, Jupudi AA, Joachims ML, Chiorini JA, Lessard CJ, Farris AD, Muthuswamy SK, Warner BM, Elledge SJ. PMID: 38016469; PMCID: PMC10841602.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    7. Inhibition of JAK-STAT pathway corrects salivary gland inflammation and interferon driven immune activation in Sjögren's Disease. medRxiv. 2023 Aug 21. Gupta S, Yamada E, Nakamura H, Perez P, Pranzatelli TJF, Dominick K, Jang SI, Abed M, Martin D, Burbelo P, Zheng C, French B, Alevizos I, Khavandgar Z, Beach M, Pelayo E, Walitt B, Hasni S, Kaplan MJ, Tandon M, Teresa Magone M, Kleiner DE, Chiorini JA, Baer AN, Warner BM. PMID: 37662351; PMCID: PMC10473773.
      View in: PubMed   Mentions:
    8. Lysosomal exocytosis of HSP70 stimulates monocytic BMP6 expression in Sjögren's syndrome. J Clin Invest. 2022 03 15; 132(6). Mo YQ, Nakamura H, Tanaka T, Odani T, Perez P, Ji Y, French BN, Pranzatelli TJ, Michael DG, Yin H, Chow SS, Khalaj M, Afione SA, Zheng C, Oliveira FR, Motta ACF, Ribeiro-Silva A, Rocha EM, Nguyen CQ, Noguchi M, Atsumi T, Warner BM, Chiorini JA. PMID: 35113815; PMCID: PMC8920330.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
    9. Sclerosing Sialadenitis Is Associated With Salivary Gland Hypofunction and a Unique Gene Expression Profile in Sjögren's Syndrome. Front Immunol. 2021; 12:699722. Yin H, Pranzatelli TJF, French BN, Zhang N, Warner BM, Chiorini JA, NIDCD/NIDCR Genomics and Computational Biology Core. PMID: 34400910; PMCID: PMC8363566.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    10. SARS-CoV-2 infection of the oral cavity and saliva. Nat Med. 2021 05; 27(5):892-903. Huang N, Pérez P, Kato T, Mikami Y, Okuda K, Gilmore RC, Conde CD, Gasmi B, Stein S, Beach M, Pelayo E, Maldonado JO, Lafont BA, Jang SI, Nasir N, Padilla RJ, Murrah VA, Maile R, Lovell W, Wallet SM, Bowman NM, Meinig SL, Wolfgang MC, Choudhury SN, Novotny M, Aevermann BD, Scheuermann RH, Cannon G, Anderson CW, Lee RE, Marchesan JT, Bush M, Freire M, Kimple AJ, Herr DL, Rabin J, Grazioli A, Das S, French BN, Pranzatelli T, Chiorini JA, Kleiner DE, Pittaluga S, Hewitt SM, Burbelo PD, Chertow D, NIH COVID-19 Autopsy Consortium, HCA Oral and Craniofacial Biological Network, Frank K, Lee J, Boucher RC, Teichmann SA, Warner BM, Byrd KM. PMID: 33767405; PMCID: PMC8240394.
      View in: PubMed   Mentions: 423     Fields:    Translation:HumansCells
    11. Lysosome-associated membrane protein 3 misexpression in salivary glands induces a Sjögren's syndrome-like phenotype in mice. Ann Rheum Dis. 2021 08; 80(8):1031-1039. Nakamura H, Tanaka T, Pranzatelli T, Ji Y, Yin H, Perez P, Afione SA, Jang SI, Goldsmith C, Zheng CY, Swaim WD, Warner BM, Hirata N, Noguchi M, Atsumi T, Chiorini JA. PMID: 33658234; PMCID: PMC8292598.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimals
    12. Integrated Single-Cell Atlases Reveal an Oral SARS-CoV-2 Infection and Transmission Axis. medRxiv. 2020 Oct 27. Huang N, Perez P, Kato T, Mikami Y, Okuda K, Gilmore RC, Domínguez Conde C, Gasmi B, Stein S, Beach M, Pelayo E, Maldonado J, LaFont B, Padilla R, Murrah V, Maile R, Lovell W, Wallet S, Bowman NM, Meinig SL, Wolfgang MC, Choudhury SN, Novotny M, Aevermann BD, Scheuermann R, Cannon G, Anderson C, Marchesan J, Bush M, Freire M, Kimple A, Herr DL, Rabin J, Grazioli A, French BN, Pranzatelli T, Chiorini JA, Kleiner DE, Pittaluga S, Hewitt S, Burbelo PD, Chertow D, Frank K, Lee J, Boucher RC, Teichmann SA, Warner BM, Byrd KM. PMID: 33140061; PMCID: PMC7605572.
      View in: PubMed   Mentions: 4  
    13. Comparison of Prostate-Specific Membrane Antigen Expression Levels in Human Salivary Glands to Non-Human Primates and Rodents. Cancer Biother Radiopharm. 2020 May; 35(4):284-291. Roy J, Warner BM, Basuli F, Zhang X, Wong K, Pranzatelli T, Ton AT, Chiorini JA, Choyke PL, Lin FI, Jagoda EM. PMID: 32074455; PMCID: PMC7247045.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimals
    14. Correction to: ATAC2GRN: optimized ATAC-seq and DNase1-seq pipelines for rapid and accurate genome regulatory network inference. BMC Genomics. 2019 01 15; 20(1):44. Pranzatelli TJF, Michae DG, Chiorini JA. PMID: 30646842; PMCID: PMC6332551.
      View in: PubMed   Mentions:    Fields:    
    15. ATAC2GRN: optimized ATAC-seq and DNase1-seq pipelines for rapid and accurate genome regulatory network inference. BMC Genomics. 2018 Jul 31; 19(1):563. Pranzatelli TJF, Michael DG, Chiorini JA. PMID: 30064353; PMCID: PMC6069842.
      View in: PubMed   Mentions: 19     Fields:    
    16. Cross-contamination of the human salivary gland HSG cell line with HeLa cells: A STR analysis study. Oral Dis. 2018 Nov; 24(8):1477-1483. Lin LC, Elkashty O, Ramamoorthi M, Trinh N, Liu Y, Sunavala-Dossabhoy G, Pranzatelli T, Michael DG, Chivasso C, Perret J, Chiorini JA, Delporte C, Tran SD. PMID: 29923277.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
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