Alistair Russell

Title(s)Assistant Professor, Molecular Biology
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Collapse Research 
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    Probing the contribution of viral heterogeneity to interferon induction
    NIH K22AI141678Dec 20, 2019 - Nov 30, 2021
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Analysis of NS2-dependent effects on influenza PB1 segment extends replication requirements beyond the canonical promoter. Nat Commun. 2025 Feb 22; 16(1):1875. Swaminath S, Mendes M, Zhang Y, Remick KA, Mejia I, Güereca M, Te Velthuis AJW, Russell AB. PMID: 39987189; PMCID: PMC11846981.
      View in: PubMed   Mentions:    Fields:    
    2. Influenza A virus transcription generates capped cRNAs that activate RIG-I. bioRxiv. 2024 Dec 03. Elshina E, Pitre E, Mendes M, Schweibenz B, Fan RLY, French H, Park JW, Wang W, Poon LLM, Marcotrigiano J, Russell AB, Te Velthuis AJW. PMID: 39605425; PMCID: PMC11601390.
      View in: PubMed   Mentions:
    3. Novel CRITR-seq approach reveals influenza transcription is modulated by NELF and is a key event precipitating an interferon response. bioRxiv. 2024 Nov 15. Vicary AC, Jordan SNZ, Mendes M, Swaminath S, Castro LK, Porter JS, Russell AB. PMID: 39605461; PMCID: PMC11601499.
      View in: PubMed   Mentions:
    4. Efficient genome replication in influenza A virus requires NS2 and sequence beyond the canonical promoter. bioRxiv. 2024 Sep 10. Swaminath S, Mendes M, Zhang Y, Remick KA, Mejia I, Güereca M, Te Velthuis AJW, Russell AB. PMID: 39314307; PMCID: PMC11419028.
      View in: PubMed   Mentions:
    5. Cryptic proteins translated from deletion-containing viral genomes dramatically expand the influenza virus proteome. Nucleic Acids Res. 2024 Apr 12; 52(6):3199-3212. Ranum JN, Ledwith MP, Alnaji FG, Diefenbacher M, Orton R, Sloan E, Güereca M, Feltman EM, Smollett K, da Silva Filipe A, Conley M, Russell AB, Brooke CB, Hutchinson E, Mehle A. PMID: 38407436; PMCID: PMC11014358.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    6. Cryptic proteins translated from deletion-containing viral genomes dramatically expand the influenza virus proteome. bioRxiv. 2024 Feb 07. Ranum JN, Ledwith MP, Alnaji FG, Diefenbacher M, Orton R, Sloan E, Guereca M, Feltman EM, Smollett K, da Silva Filipe A, Conley M, Russell AB, Brooke CB, Hutchinson E, Mehle A. PMID: 38168266; PMCID: PMC10760031.
      View in: PubMed   Mentions:
    7. The use of single-cell RNA-seq to study heterogeneity at varying levels of virus-host interactions. PLoS Pathog. 2024 Jan; 20(1):e1011898. Swaminath S, Russell AB. PMID: 38236826; PMCID: PMC10796064.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    8. Similarities in the induction of the intracellular pathogen response in Caenorhabditis elegans and the type I interferon response in mammals. Bioessays. 2023 11; 45(11):e2300097. Lažetic V, Batachari LE, Russell AB, Troemel ER. PMID: 37667453; PMCID: PMC10694843.
      View in: PubMed   Mentions: 7     Fields:    Translation:Animals
    9. Maximal interferon induction by influenza lacking NS1 is infrequent owing to requirements for replication and export. PLoS Pathog. 2023 04; 19(4):e1010943. Vicary AC, Mendes M, Swaminath S, Lekbua A, Reddan J, Rodriguez ZK, Russell AB. PMID: 37068114; PMCID: PMC10138204.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    10. Antibacterial potency of type VI amidase effector toxins is dependent on substrate topology and cellular context. Elife. 2022 06 28; 11. Radkov A, Sapiro AL, Flores S, Henderson C, Saunders H, Kim R, Massa S, Thompson S, Mateusiak C, Biboy J, Zhao Z, Starita LM, Hatleberg WL, Vollmer W, Russell AB, Simorre JP, Anthony-Cahill S, Brzovic P, Hayes B, Chou S. PMID: 35762582; PMCID: PMC9270033.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    11. Library-based analysis reveals segment and length dependent characteristics of defective influenza genomes. PLoS Pathog. 2021 12; 17(12):e1010125. Mendes M, Russell AB. PMID: 34882752; PMCID: PMC8691639.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    12. Cap-Snatching Leads to Novel Viral Proteins. Cell. 2020 06 25; 181(7):1450-1451. Russell AB. PMID: 32589954.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    13. Single-Cell Virus Sequencing of Influenza Infections That Trigger Innate Immunity. J Virol. 2019 07 15; 93(14). Russell AB, Elshina E, Kowalsky JR, Te Velthuis AJW, Bloom JD. PMID: 31068418; PMCID: PMC6600203.
      View in: PubMed   Mentions: 76     Fields:    Translation:HumansCells
    14. Extreme heterogeneity of influenza virus infection in single cells. Elife. 2018 02 16; 7. Russell AB, Trapnell C, Bloom JD. PMID: 29451492; PMCID: PMC5826275.
      View in: PubMed   Mentions: 135     Fields:    Translation:HumansAnimalsCells
    15. Deletions in the repertoire of Pseudomonas syringae pv. tomato DC3000 type III secretion effector genes reveal functional overlap among effectors. PLoS Pathog. 2009 Apr; 5(4):e1000388. Kvitko BH, Park DH, Velásquez AC, Wei CF, Russell AB, Martin GB, Schneider DJ, Collmer A. PMID: 19381254; PMCID: PMC2663052.
      View in: PubMed   Mentions: 124     Fields:    Translation:AnimalsCells
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