Yohei Abe

Title(s)Assistant Project Scientist, Cellular and Molecular Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Peripheral neuropathy and nerve electrophysiological changes with enfortumab vedotin in patients with advanced urothelial carcinoma: a prospective multicenter cohort study. Int J Clin Oncol. 2024 Feb 28. Taoka R, Kamada M, Izumi K, Tanimoto R, Daizumoto K, Hayashida Y, Uematsu K, Arai H, Sano T, Saito R, Hirama H, Kobayashi T, Honda T, Osaki Y, Abe Y, Naito H, Tohi Y, Matsuoka Y, Kato T, Okazoe H, Ueda N, Sugimoto M. PMID: 38418804.
      View in: PubMed   Mentions:    Fields:    
    2. Impact of frailty on cancer-related fatigue and quality of life in outpatients with prostate cancer: a cross-sectional study of patient-reported outcomes. Jpn J Clin Oncol. 2024 Feb 09. Tohi Y, Kato T, Honda T, Osaki Y, Abe Y, Naito H, Matsuoka Y, Okazoe H, Taoka R, Ueda N, Sugimoto M. PMID: 38336460.
      View in: PubMed   Mentions:    Fields:    
    3. A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator complex formation for inflammatory gene activation. Proc Natl Acad Sci U S A. 2024 Jan 09; 121(2):e2316104121. Abe Y, Kofman ER, Ouyang Z, Cruz-Becerra G, Spann NJ, Seidman JS, Troutman TD, Stender JD, Taylor H, Fan W, Link VM, Shen Z, Sakai J, Downes M, Evans RM, Kadonaga JT, Rosenfeld MG, Glass CK. PMID: 38165941; PMCID: PMC10786282.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    4. RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1β- and RNA-dependent co-activator of osteoclast gene expression. Mol Cell. 2023 10 05; 83(19):3421-3437.e11. Abe Y, Kofman ER, Almeida M, Ouyang Z, Ponte F, Mueller JR, Cruz-Becerra G, Sakai M, Prohaska TA, Spann NJ, Resende-Coelho A, Seidman JS, Stender JD, Taylor H, Fan W, Link VM, Cobo I, Schlachetzki JCM, Hamakubo T, Jepsen K, Sakai J, Downes M, Evans RM, Yeo GW, Kadonaga JT, Manolagas SC, Rosenfeld MG, Glass CK. PMID: 37751740; PMCID: PMC10591845.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    5. Discrimination of cell-intrinsic and environment-dependent effects of natural genetic variation on Kupffer cell epigenomes and transcriptomes. Nat Immunol. 2023 Nov; 24(11):1825-1838. Bennett H, Troutman TD, Zhou E, Spann NJ, Link VM, Seidman JS, Nickl CK, Abe Y, Sakai M, Pasillas MP, Marlman JM, Guzman C, Hosseini M, Schnabl B, Glass CK. PMID: 37735593; PMCID: PMC10602851.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    6. Oral 5-aminolevulinic acid administration before transurethral resection of bladder tumor induces perioperative nausea and vomiting. Photodiagnosis Photodyn Ther. 2023 Sep; 43:103707. Taoka R, Yamada K, Sawanobori Y, Honda T, Osaki Y, Abe Y, Naito H, Tohi Y, Matsuoka Y, Kato T, Okazoe H, Ueda N, Sugimoto M. PMID: 37451655.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    7. [A Case of Retroperitoneal Lymphangioleiomyomatosis]. Hinyokika Kiyo. 2023 Jun; 69(6):151-155. Kambe T, Yamasaki T, Nagoshi A, Fujiwara T, Mine Y, Hagimoto H, Hattori Y, Abe Y, Yamashita D, Tsutsumi N, Kawakita M. PMID: 37460278.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    8. Impact of renal sinus protrusions on achieving trifecta in robot-assisted partial nephrectomy. BJUI Compass. 2023 Sep; 4(5):584-590. Hattori Y, Kambe T, Mine Y, Hagimoto H, Kokubun H, Abe Y, Yamashita D, Tsutsumi N, Arizono S, Yamasaki T, Kawakita M. PMID: 37636206; PMCID: PMC10447216.
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    9. Necessity of prophylactic drainage tube in retroperitoneal laparoscopic nephroureterectomy with open distal ureterectomy: A matched-pair analysis. Int J Urol. 2023 07; 30(7):579-584. Hagimoto H, Kambe T, Mine Y, Kokubun H, Hattori Y, Abe Y, Kubota M, Tsutsumi N, Yamasaki T, Kawakita M. PMID: 36951440.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    10. [A Case of m0CRPC after Hormone Therapy for Pelvic Lymph Node Metastasis in which Salvage RARP was Effective]. Hinyokika Kiyo. 2023 Feb; 69(2):59-62. Kokubun H, Kubota M, Kambe T, Mine Y, Hagimoto H, Yamaguchi R, Murata S, Makita N, Hattori Y, Abe Y, Tsutsumi N, Yamasaki T, Inoue K, Kawakita M. PMID: 36863873.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    11. MYPT1-PP1β phosphatase negatively regulates both chromatin landscape and co-activator recruitment for beige adipogenesis. Nat Commun. 2022 09 29; 13(1):5715. Takahashi H, Yang G, Yoneshiro T, Abe Y, Ito R, Yang C, Nakazono J, Okamoto-Katsuyama M, Uchida A, Arai M, Jin H, Choi H, Tumenjargal M, Xie S, Zhang J, Sagae H, Zhao Y, Yamaguchi R, Nomura Y, Shimizu Y, Yamada K, Yasuda S, Kimura H, Tanaka T, Wada Y, Kodama T, Aburatani H, Zhu MS, Inagaki T, Osborne TF, Kawamura T, Ishihama Y, Matsumura Y, Sakai J. PMID: 36175407; PMCID: PMC9523048.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    12. Surgical and functional outcomes of robot-assisted versus laparoscopic partial nephrectomy with cortical renorrhaphy omission. Sci Rep. 2022 07 29; 12(1):13000. Kubota M, Yamasaki T, Murata S, Abe Y, Tohi Y, Mine Y, Hagimoto H, Kokubun H, Suzuki I, Tsutsumi N, Inoue K, Kawakita M. PMID: 35906380; PMCID: PMC9338244.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    13. Robot-assisted transperitoneal reconstruction of a retrocaval ureter: A report of two cases. Asian J Endosc Surg. 2022 Jul 11. Mine Y, Yamasaki T, Kambe T, Hagimoto H, Kokubun H, Hattori Y, Abe Y, Kubota M, Tsutsumi N, Kawakita M. PMID: 35817417.
      View in: PubMed   Mentions: 1     Fields:    
    14. Effect of continued perioperative antithrombotic therapy on bleeding outcomes following laparoscopic nephrectomy and nephroureterectomy. Asian J Endosc Surg. 2022 Jul 04. Kubota M, Matsuoka T, Mine Y, Hagimoto H, Kokubun H, Murata S, Makita N, Hattori Y, Suzuki I, Abe Y, Tohi Y, Tsutsumi N, Yamasaki T, Inoue K, Kawakita M. PMID: 35789539.
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    15. RORγt phosphorylation protects against T cell-mediated inflammation. Cell Rep. 2022 03 15; 38(11):110520. Ma S, Patel SA, Abe Y, Chen N, Patel PR, Cho BS, Abbasi N, Zeng S, Schnabl B, Chang JT, Huang WJM. PMID: 35294872; PMCID: PMC8982147.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    16. Monosodium urate crystals regulate a unique JNK-dependent macrophage metabolic and inflammatory response. Cell Rep. 2022 03 08; 38(10):110489. Cobo I, Cheng A, Murillo-Saich J, Coras R, Torres A, Abe Y, Lana AJ, Schlachetzki J, Liu-Bryan R, Terkeltaub R, Sanchez-Lopez E, Glass CK, Guma M. PMID: 35263587; PMCID: PMC8989403.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    17. Correction to: Comparison between 5-aminolevulinic acid photodynamic diagnosis and narrow-band imaging for bladder cancer detection. BMC Urol. 2022 Feb 17; 22(1):23. Hagimoto H, Makita N, Mine Y, Kokubun H, Murata S, Abe Y, Kubota M, Tsutsumi N, Yamasaki T, Kawakita M. PMID: 35177046; PMCID: PMC8855539.
      View in: PubMed   Mentions:    Fields:    
    18. Self-Pierce Riveting of Three Thin Sheets of Aluminum Alloy A5052 and 980 MPa Steel. Materials (Basel). 2022 Jan 28; 15(3). Achira S, Abe Y, Mori KI. PMID: 35160956; PMCID: PMC8840001.
      View in: PubMed   Mentions: 1  
    19. Comparison between 5-aminolevulinic acid photodynamic diagnosis and narrow-band imaging for bladder cancer detection. BMC Urol. 2021 Dec 22; 21(1):180. Hagimoto H, Makita N, Mine Y, Kokubun H, Murata S, Abe Y, Kubota M, Tsutsumi N, Yamasaki T, Kawakita M. PMID: 34937543; PMCID: PMC8693495.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    20. Spatiotemporal dynamics of SETD5-containing NCoR-HDAC3 complex determines enhancer activation for adipogenesis. Nat Commun. 2021 12 02; 12(1):7045. Matsumura Y, Ito R, Yajima A, Yamaguchi R, Tanaka T, Kawamura T, Magoori K, Abe Y, Uchida A, Yoneshiro T, Hirakawa H, Zhang J, Arai M, Yang C, Yang G, Takahashi H, Fujihashi H, Nakaki R, Yamamoto S, Ota S, Tsutsumi S, Inoue SI, Kimura H, Wada Y, Kodama T, Inagaki T, Osborne TF, Aburatani H, Node K, Sakai J. PMID: 34857762; PMCID: PMC8639990.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    21. SIMULATION OF NEUTRON RESPONSE FUNCTIONS OF SILICON SENSOR APPLIED TO REAL-TIME PERSONAL ALBEDO NEUTRON DOSEMETER IN THE ENERGY RANGE BETWEEN 0.01 EV AND 10 KEV. Radiat Prot Dosimetry. 2021 Nov 03; 196(1-2):110-113. Abe Y, Takada M, Nunomiya T, Aoyama K, Nakamura T, Matsumoto T, Masuda A. PMID: 34545939.
      View in: PubMed   Mentions:    Fields:    Translation:PHPublic Health
    22. [Risk Factors for Recurrence in Patients with Pathological Lymph Node-Positive Prostate Cancer after Extended Lymph Node Dissection in Laparoscopic and Robotic-Assisted Radical Prostatectomy]. Hinyokika Kiyo. 2021 Mar; 67(3):83-90. Yamaguchi R, Murata S, Kokubun H, Makita N, Abe Y, Kubota M, Tsutsumi N, Sugino Y, Utsunomiya N, Okada T, Inoue K, Kawakita M. PMID: 33957027.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    23. Effect of Continued Perioperative Anticoagulant Therapy on Bleeding Outcomes Following Robot-assisted Radical Prostatectomy. Urology. 2021 02; 148:151-158. Kubota M, Matsuoka T, Yamasaki T, Kokubun H, Hagimoto H, Murata S, Makita N, Suzuki I, Abe Y, Tohi Y, Tsutsumi N, Inoue K, Kawakita M. PMID: 33248139.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    24. Mechanical Clinching and Self-Pierce Riveting of Thin Three Sheets of 5000 Series Aluminium Alloy and 980 MPa Grade Cold Rolled Ultra-High Strength Steel. Materials (Basel). 2020 Oct 23; 13(21). Abe Y, Maeda T, Yoshioka D, Mori KI. PMID: 33114102; PMCID: PMC7660288.
      View in: PubMed   Mentions: 4  
    25. PPARα activation directly upregulates thrombomodulin in the diabetic retina. Sci Rep. 2020 07 02; 10(1):10837. Shiono A, Sasaki H, Sekine R, Abe Y, Matsumura Y, Inagaki T, Tanaka T, Kodama T, Aburatani H, Sakai J, Takagi H. PMID: 32616724; PMCID: PMC7331602.
      View in: PubMed   Mentions: 14     Fields:    Translation:Animals
    26. Atypical oncologic failure after laparoscopic and robot-assisted radical cystectomy at a single institution. Int J Clin Oncol. 2020 Jul; 25(7):1385-1392. Kubota M, Kokubun H, Yamaguchi R, Murata S, Makita N, Suzuki I, Suzuki R, Abe Y, Tohi Y, Tsutsumi N, Sugino Y, Inoue K, Kawakita M. PMID: 32306131.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    27. Coordinated demethylation of H3K9 and H3K27 is required for rapid inflammatory responses of endothelial cells. EMBO J. 2020 04 01; 39(7):e103949. Higashijima Y, Matsui Y, Shimamura T, Nakaki R, Nagai N, Tsutsumi S, Abe Y, Link VM, Osaka M, Yoshida M, Watanabe R, Tanaka T, Taguchi A, Miura M, Ruan X, Li G, Inoue T, Nangaku M, Kimura H, Furukawa T, Aburatani H, Wada Y, Ruan Y, Glass CK, Kanki Y. PMID: 32125007; PMCID: PMC7110136.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimalsCells
    28. Surgical outcomes and learning curve of totally intracorporeal ileal conduit urinary diversion following laparoscopic radical cystectomy at a single institution. Asian J Endosc Surg. 2020 Oct; 13(4):532-538. Kubota M, Kokubun H, Yamaguchi R, Murata S, Makita N, Suzuki I, Suzuki R, Abe Y, Tohi Y, Tsutsumi N, Sugino Y, Inoue K, Kawakita M. PMID: 32110836.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    29. Body Fat Area as a Predictive Marker of New-Onset Diabetes Mellitus After Kidney Transplantation. Transplant Proc. 2019 Dec; 51(10):3281-3285. Taoka R, Tanaka K, Sofue T, Abe Y, Naito H, Miyauchi Y, Matsuoka Y, Tajima M, Kato T, Tsunemori H, Ueda N, Nishiyama Y, Minamino T, Sugimoto M, Kakehi Y. PMID: 31635839.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    30. Liver-Derived Signals Sequentially Reprogram Myeloid Enhancers to Initiate and Maintain Kupffer Cell Identity. Immunity. 2019 10 15; 51(4):655-670.e8. Sakai M, Troutman TD, Seidman JS, Ouyang Z, Spann NJ, Abe Y, Ego KM, Bruni CM, Deng Z, Schlachetzki JCM, Nott A, Bennett H, Chang J, Vu BT, Pasillas MP, Link VM, Texari L, Heinz S, Thompson BM, McDonald JG, Geissmann F, Glass CK. PMID: 31587991; PMCID: PMC6800814.
      View in: PubMed   Mentions: 134     Fields:    Translation:AnimalsCells
    31. Setd5 haploinsufficiency alters neuronal network connectivity and leads to autistic-like behaviors in mice. Transl Psychiatry. 2019 01 17; 9(1):24. Moore SM, Seidman JS, Ellegood J, Gao R, Savchenko A, Troutman TD, Abe Y, Stender J, Lee D, Wang S, Voytek B, Lerch JP, Suh H, Glass CK, Muotri AR. PMID: 30655503; PMCID: PMC6336863.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    32. Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function. Cell. 2018 06 14; 173(7):1796-1809.e17. Link VM, Duttke SH, Chun HB, Holtman IR, Westin E, Hoeksema MA, Abe Y, Skola D, Romanoski CE, Tao J, Fonseca GJ, Troutman TD, Spann NJ, Strid T, Sakai M, Yu M, Hu R, Fang R, Metzler D, Ren B, Glass CK. PMID: 29779944; PMCID: PMC6003872.
      View in: PubMed   Mentions: 84     Fields:    Translation:AnimalsCells
    33. Histone demethylase JMJD1A coordinates acute and chronic adaptation to cold stress via thermogenic phospho-switch. Nat Commun. 2018 04 19; 9(1):1566. Abe Y, Fujiwara Y, Takahashi H, Matsumura Y, Sawada T, Jiang S, Nakaki R, Uchida A, Nagao N, Naito M, Kajimura S, Kimura H, Osborne TF, Aburatani H, Kodama T, Inagaki T, Sakai J. PMID: 29674659; PMCID: PMC5908789.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    34. JMJD1A is a signal-sensing scaffold that regulates acute chromatin dynamics via SWI/SNF association for thermogenesis. Nat Commun. 2015 May 07; 6:7052. Abe Y, Rozqie R, Matsumura Y, Kawamura T, Nakaki R, Tsurutani Y, Tanimura-Inagaki K, Shiono A, Magoori K, Nakamura K, Ogi S, Kajimura S, Kimura H, Tanaka T, Fukami K, Osborne TF, Kodama T, Aburatani H, Inagaki T, Sakai J. PMID: 25948511; PMCID: PMC4432656.
      View in: PubMed   Mentions: 61     Fields:    Translation:HumansAnimalsCells
    35. Effects of 2-Octynyladenosine (YT-146) on Mitochondrial Function in Ischemic/Reperfused Rat Hearts. Biol Pharm Bull. 2015; 38(12):1946-53. Sasamori J, Abe Y, Marunouchi T, Manome Y, Uchibori T, Tanonaka K. PMID: 26632185.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    36. The FBXL10/KDM2B scaffolding protein associates with novel polycomb repressive complex-1 to regulate adipogenesis. J Biol Chem. 2015 Feb 13; 290(7):4163-77. Inagaki T, Iwasaki S, Matsumura Y, Kawamura T, Tanaka T, Abe Y, Yamasaki A, Tsurutani Y, Yoshida A, Chikaoka Y, Nakamura K, Magoori K, Nakaki R, Osborne TF, Fukami K, Aburatani H, Kodama T, Sakai J. PMID: 25533466; PMCID: PMC4326826.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    37. The role of hypertriglyceridemia in the development of atherosclerosis and endothelial dysfunction. Nutrients. 2014 Mar 24; 6(3):1236-50. Matsumoto S, Gotoh N, Hishinuma S, Abe Y, Shimizu Y, Katano Y, Ishihata A. PMID: 24667131; PMCID: PMC3967190.
      View in: PubMed   Mentions: 21     Fields:    Translation:Animals
    38. Objective evaluation of whiteness of cooked rice and rice cakes using a portable spectrophotometer. Breed Sci. 2014 Mar; 63(5):489-94. Goto H, Asanome N, Suzuki K, Sano T, Saito H, Abe Y, Chuba M, Nishio T. PMID: 24757389; PMCID: PMC3949586.
      View in: PubMed   Mentions: 5  
    39. Changes in small heat shock proteins HSPB1, HSPB5 and HSPB8 in mitochondria of the failing heart following myocardial infarction in rats. Biol Pharm Bull. 2013; 36(4):529-39. Marunouchi T, Abe Y, Murata M, Inomata S, Sanbe A, Takagi N, Tanonaka K. PMID: 23546289.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    40. High affinity of interaction between superantigen and T cell receptor Vbeta molecules induces a high level and prolonged expansion of superantigen-reactive CD4+ T cells. J Biol Chem. 2010 Oct 01; 285(40):30427-35. Omoe K, Nunomura W, Kato H, Li ZJ, Igarashi O, Araake M, Sano K, Ono HK, Abe Y, Hu DL, Nakane A, Kiyono H, Takakuwa Y, Shinagawa K, Uchiyama T, Imanishi K. PMID: 20663890; PMCID: PMC2945535.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    41. Possible involvement of mitochondrial energy-producing ability in the development of right ventricular failure in monocrotaline-induced pulmonary hypertensive rats. J Pharmacol Sci. 2009 Sep; 111(1):33-43. Daicho T, Yagi T, Abe Y, Ohara M, Marunouchi T, Takeo S, Tanonaka K. PMID: 19763046.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    42. Alterations in pharmacological action of the right ventricle of monocrotaline-induced pulmonary hypertensive rats. Biol Pharm Bull. 2009 Aug; 32(8):1378-84. Daicho T, Yagi T, Takano S, Marunouchi T, Abe Y, Ohara M, Takeo S, Tanonaka K. PMID: 19652377.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    43. Characterization of novel staphylococcal enterotoxin-like toxin type P. Infect Immun. 2005 Sep; 73(9):5540-6. Omoe K, Imanishi K, Hu DL, Kato H, Fugane Y, Abe Y, Hamaoka S, Watanabe Y, Nakane A, Uchiyama T, Shinagawa K. PMID: 16113270; PMCID: PMC1231067.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimalsCells