William Hancock

Title(s)Adjunct Professor, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Collapse Research 
    Collapse Research Activities and Funding
    Glycan Markers for the Early Detection of Breast Cancer
    NIH U01CA128427Sep 4, 2007 - Jun 30, 2013
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. The application of HPLC/MS analysis with a multi-enzyme digest strategy to characterize different interferon product variants produced from Pichia pastoris. Amino Acids. 2019 Sep; 51(9):1353-1363. Wang Y, Liu D, Crowell LE, Love KR, Wu SL, Hancock WS. PMID: 31446487.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    2. Liver disease-associated keratin 8 and 18 mutations modulate keratin acetylation and methylation. FASEB J. 2019 08; 33(8):9030-9043. Jang KH, Yoon HN, Lee J, Yi H, Park SY, Lee SY, Lim Y, Lee HJ, Cho JW, Paik YK, Hancock WS, Ku NO. PMID: 31199680.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    3. Advances in the Chromosome-Centric Human Proteome Project: looking to the future. Expert Rev Proteomics. 2017 12; 14(12):1059-1071. Paik YK, Omenn GS, Hancock WS, Lane L, Overall CM. PMID: 29039980.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    4. Systematic Proteogenomic Approach To Exploring a Novel Function for NHERF1 in Human Reproductive Disorder: Lessons for Exploring Missing Proteins. J Proteome Res. 2017 12 01; 16(12):4455-4467. Na K, Shin H, Cho JY, Jung SH, Lim J, Lim JS, Kim EA, Kim HS, Kang AR, Kim JH, Shin JM, Jeong SK, Kim CY, Park JY, Chung HM, Omenn GS, Hancock WS, Paik YK. PMID: 28960081.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    5. Progress in the Chromosome-Centric Human Proteome Project as Highlighted in the Annual Special Issue IV. J Proteome Res. 2016 11 04; 15(11):3945-3950. Paik YK, Overall CM, Deutsch EW, Hancock WS, Omenn GS. PMID: 27809547.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    6. Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1. J Proteome Res. 2016 11 04; 15(11):3961-3970. Deutsch EW, Overall CM, Van Eyk JE, Baker MS, Paik YK, Weintraub ST, Lane L, Martens L, Vandenbrouck Y, Kusebauch U, Hancock WS, Hermjakob H, Aebersold R, Moritz RL, Omenn GS. PMID: 27490519.
      View in: PubMed   Mentions: 47     Fields:    Translation:Humans
    7. Quantitative Profiling Identifies Potential Regulatory Proteins Involved in Development from Dauer Stage to L4 Stage in Caenorhabditis elegans. J Proteome Res. 2016 Feb 05; 15(2):531-9. Kim S, Lee HJ, Hahm JH, Jeong SK, Park DH, Hancock WS, Paik YK. PMID: 26751275.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    8. Integrated Proteomic and Genomic Analysis of Gastric Cancer Patient Tissues. J Proteome Res. 2015 Dec 04; 14(12):4995-5006. Yan JF, Kim H, Jeong SK, Lee HJ, Sethi MK, Lee LY, Beavis RC, Im H, Snyder MP, Hofree M, Ideker T, Wu SL, Paik YK, Fanayan S, Hancock WS. PMID: 26435392.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    9. Combination of Multiple Spectral Libraries Improves the Current Search Methods Used to Identify Missing Proteins in the Chromosome-Centric Human Proteome Project. J Proteome Res. 2015 Dec 04; 14(12):4959-66. Cho JY, Lee HJ, Jeong SK, Kim KY, Kwon KH, Yoo JS, Omenn GS, Baker MS, Hancock WS, Paik YK. PMID: 26330117.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    10. Recent Advances in the Chromosome-Centric Human Proteome Project: Missing Proteins in the Spot Light. J Proteome Res. 2015 Sep 04; 14(9):3409-14. Paik YK, Omenn GS, Overall CM, Deutsch EW, Hancock WS. PMID: 26337862.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    11. GenomewidePDB 2.0: A Newly Upgraded Versatile Proteogenomic Database for the Chromosome-Centric Human Proteome Project. J Proteome Res. 2015 Sep 04; 14(9):3710-9. Jeong SK, Hancock WS, Paik YK. PMID: 26272709.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    12. Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project. J Proteome Res. 2015 Sep 04; 14(9):3415-31. Horvatovich P, Lundberg EK, Chen YJ, Sung TY, He F, Nice EC, Goode RJ, Yu S, Ranganathan S, Baker MS, Domont GB, Velasquez E, Li D, Liu S, Wang Q, He QY, Menon R, Guan Y, Corrales FJ, Segura V, Casal JI, Pascual-Montano A, Albar JP, Fuentes M, Gonzalez-Gonzalez M, Diez P, Ibarrola N, Degano RM, Mohammed Y, Borchers CH, Urbani A, Soggiu A, Yamamoto T, Salekdeh GH, Archakov A, Ponomarenko E, Lisitsa A, Lichti CF, Mostovenko E, Kroes RA, Rezeli M, Végvári Á, Fehniger TE, Bischoff R, Vizcaíno JA, Deutsch EW, Lane L, Nilsson CL, Marko-Varga G, Omenn GS, Jeong SK, Lim JS, Paik YK, Hancock WS. PMID: 26076068.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    13. In-depth N-glycome profiling of paired colorectal cancer and non-tumorigenic tissues reveals cancer-, stage- and EGFR-specific protein N-glycosylation. Glycobiology. 2015 Oct; 25(10):1064-78. Sethi MK, Kim H, Park CK, Baker MS, Paik YK, Packer NH, Hancock WS, Fanayan S, Thaysen-Andersen M. PMID: 26085185.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    14. Quantitative proteomic analysis of paired colorectal cancer and non-tumorigenic tissues reveals signature proteins and perturbed pathways involved in CRC progression and metastasis. J Proteomics. 2015 Aug 03; 126:54-67. Sethi MK, Thaysen-Andersen M, Kim H, Park CK, Baker MS, Packer NH, Paik YK, Hancock WS, Fanayan S. PMID: 26054784.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    15. Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome. J Proteome Res. 2015 Feb 06; 14(2):603-8. Nilsson CL, Mostovenko E, Lichti CF, Ruggles K, Fenyö D, Rosenbloom KR, Hancock WS, Paik YK, Omenn GS, LaBaer J, Kroes RA, Uhlén M, Hober S, Végvári Á, Andrén PE, Sulman EP, Lang FF, Fuentes M, Carlsohn E, Emmett MR, Moskal JR, Berven FS, Fehniger TE, Marko-Varga G. PMID: 25369122.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    16. Comprehensive N-glycome profiling of cultured human epithelial breast cells identifies unique secretome N-glycosylation signatures enabling tumorigenic subtype classification. J Proteome Res. 2014 Nov 07; 13(11):4783-95. Lee LY, Thaysen-Andersen M, Baker MS, Packer NH, Hancock WS, Fanayan S. PMID: 25210975.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    17. Comparative studies of the proteome, glycoproteome, and N-glycome of clear cell renal cell carcinoma plasma before and after curative nephrectomy. J Proteome Res. 2014 Nov 07; 13(11):4889-900. Gbormittah FO, Lee LY, Taylor K, Hancock WS, Iliopoulos O. PMID: 25184692.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    18. Identification of human complement factor B as a novel biomarker candidate for pancreatic ductal adenocarcinoma. J Proteome Res. 2014 Nov 07; 13(11):4878-88. Lee MJ, Na K, Jeong SK, Lim JS, Kim SA, Lee MJ, Song SY, Kim H, Hancock WS, Paik YK. PMID: 25057901.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    19. Functional annotation of proteome encoded by human chromosome 22. J Proteome Res. 2014 Jun 06; 13(6):2749-60. Pinto SM, Manda SS, Kim MS, Taylor K, Selvan LD, Balakrishnan L, Subbannayya T, Yan F, Prasad TS, Gowda H, Lee C, Hancock WS, Pandey A. PMID: 24669763.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    20. Abundance-ratio-based semiquantitative analysis of site-specific N-linked glycopeptides present in the plasma of hepatocellular carcinoma patients. J Proteome Res. 2014 May 02; 13(5):2328-38. Lee HJ, Cha HJ, Lim JS, Lee SH, Song SY, Kim H, Hancock WS, Yoo JS, Paik YK. PMID: 24628331.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    21. Development of an improved fractionation of the human plasma proteome by a combination of abundant proteins depletion and multi-lectin affinity chromatography. Bioanalysis. 2014; 6(19):2537-48. Gbormittah FO, Hincapie M, Hancock WS. PMID: 25411697.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    22. Toward more transparent and reproducible omics studies through a common metadata checklist and data publications. OMICS. 2014 Jan; 18(1):10-4. Kolker E, Özdemir V, Martens L, Hancock W, Anderson G, Anderson N, Aynacioglu S, Baranova A, Campagna SR, Chen R, Choiniere J, Dearth SP, Feng WC, Ferguson L, Fox G, Frishman D, Grossman R, Heath A, Higdon R, Hutz MH, Janko I, Jiang L, Joshi S, Kel A, Kemnitz JW, Kohane IS, Kolker N, Lancet D, Lee E, Li W, Lisitsa A, Llerena A, Macnealy-Koch C, Marshall JC, Masuzzo P, May A, Mias G, Monroe M, Montague E, Mooney S, Nesvizhskii A, Noronha S, Omenn G, Rajasimha H, Ramamoorthy P, Sheehan J, Smarr L, Smith CV, Smith T, Snyder M, Rapole S, Srivastava S, Stanberry L, Stewart E, Toppo S, Uetz P, Verheggen K, Voy BH, Warnich L, Wilhelm SW, Yandl G. PMID: 24456465.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    23. Genome-wide proteomics, Chromosome-Centric Human Proteome Project (C-HPP), part II. J Proteome Res. 2014 Jan 03; 13(1):1-4. Paik YK, Omenn GS, Thongboonkerd V, Marko-Varga G, Hancock WS. PMID: 24328071.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    24. Protannotator: a semiautomated pipeline for chromosome-wise functional annotation of the "missing" human proteome. J Proteome Res. 2014 Jan 03; 13(1):76-83. Islam MT, Garg G, Hancock WS, Risk BA, Baker MS, Ranganathan S. PMID: 24313344.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    25. Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications. Big Data. 2013 Dec; 1(4):196-201. Kolker E, Özdemir V, Martens L, Hancock W, Anderson G, Anderson N, Aynacioglu S, Baranova A, Campagna SR, Chen R, Choiniere J, Dearth SP, Feng WC, Ferguson L, Fox G, Frishman D, Grossman R, Heath A, Higdon R, Hutz MH, Janko I, Jiang L, Joshi S, Kel A, Kemnitz JW, Kohane IS, Kolker N, Lancet D, Lee E, Li W, Lisitsa A, Llerena A, MacNealy-Koch C, Marshall JC, Masuzzo P, May A, Mias G, Monroe M, Montague E, Mooney S, Nesvizhskii A, Noronha S, Omenn G, Rajasimha H, Ramamoorthy P, Sheehan J, Smarr L, Smith CV, Smith T, Snyder M, Rapole S, Srivastava S, Stanberry L, Stewart E, Toppo S, Uetz P, Verheggen K, Voy BH, Warnich L, Wilhelm SW, Yandl G. PMID: 27447251.
      View in: PubMed   Mentions:    Fields:    
    26. Distinct splice variants and pathway enrichment in the cell-line models of aggressive human breast cancer subtypes. J Proteome Res. 2014 Jan 03; 13(1):212-27. Menon R, Im H, Zhang EY, Wu SL, Chen R, Snyder M, Hancock WS, Omenn GS. PMID: 24111759.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    27. Genome wide proteomics of ERBB2 and EGFR and other oncogenic pathways in inflammatory breast cancer. J Proteome Res. 2013 Jun 07; 12(6):2805-17. Zhang EY, Cristofanilli M, Robertson F, Reuben JM, Mu Z, Beavis RC, Im H, Snyder M, Hofree M, Ideker T, Omenn GS, Fanayan S, Jeong SK, Paik YK, Zhang AF, Wu SL, Hancock WS. PMID: 23647160.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    28. Development of a method to quantitate nematode pheromone for study of small-molecule metabolism in Caenorhabditis elegans. Anal Chem. 2013 Mar 05; 85(5):2681-8. Kim KY, Joo HJ, Kwon HW, Kim H, Hancock WS, Paik YK. PMID: 23347231.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    29. Comprehensive genome-wide proteomic analysis of human placental tissue for the Chromosome-Centric Human Proteome Project. J Proteome Res. 2013 Jun 07; 12(6):2458-66. Lee HJ, Jeong SK, Na K, Lee MJ, Lee SH, Lim JS, Cha HJ, Cho JY, Kwon JY, Kim H, Song SY, Yoo JS, Park YM, Kim H, Hancock WS, Paik YK. PMID: 23362793.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    30. Identification of potential glycan cancer markers with sialic acid attached to sialic acid and up-regulated fucosylated galactose structures in epidermal growth factor receptor secreted from A431 cell line. Mol Cell Proteomics. 2013 May; 12(5):1239-49. Wu SL, Taylor AD, Lu Q, Hanash SM, Im H, Snyder M, Hancock WS. PMID: 23371026.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    31. Chromosome 11-centric human proteome analysis of human brain hippocampus tissue. J Proteome Res. 2013 Jan 04; 12(1):97-105. Kwon KH, Kim JY, Kim SY, Min HK, Lee HJ, Ji IJ, Kang T, Park GW, An HJ, Lee B, Ravid R, Ferrer I, Chung CK, Paik YK, Hancock WS, Park YM, Yoo JS. PMID: 23286719.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    32. A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17. J Proteome Res. 2013 Jan 04; 12(1):45-57. Liu S, Im H, Bairoch A, Cristofanilli M, Chen R, Deutsch EW, Dalton S, Fenyo D, Fanayan S, Gates C, Gaudet P, Hincapie M, Hanash S, Kim H, Jeong SK, Lundberg E, Mias G, Menon R, Mu Z, Nice E, Paik YK, Uhlen M, Wells L, Wu SL, Yan F, Zhang F, Zhang Y, Snyder M, Omenn GS, Beavis RC, Hancock WS. PMID: 23259914.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    33. A first step toward completion of a genome-wide characterization of the human proteome. J Proteome Res. 2013 Jan 04; 12(1):1-5. Marko-Varga G, Omenn GS, Paik YK, Hancock WS. PMID: 23256439.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    34. GenomewidePDB, a proteomic database exploring the comprehensive protein parts list and transcriptome landscape in human chromosomes. J Proteome Res. 2013 Jan 04; 12(1):106-11. Jeong SK, Lee HJ, Na K, Cho JY, Lee MJ, Kwon JY, Kim H, Park YM, Yoo JS, Hancock WS, Paik YK. PMID: 23252913.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    35. Uniting ENCODE with genome-wide proteomics. Nat Biotechnol. 2012 Nov; 30(11):1065-7. Paik YK, Hancock WS. PMID: 23138303.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    36. Using lectins to harvest the plasma/serum glycoproteome. Electrophoresis. 2012 Jul; 33(12):1746-54. Fanayan S, Hincapie M, Hancock WS. PMID: 22740463.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    37. Analysis of dynamic changes in the proteome of a Bcl-XL overexpressing Chinese hamster ovary cell culture during exponential and stationary phases. Biotechnol Prog. 2012 May-Jun; 28(3):814-23. Carlage T, Kshirsagar R, Zang L, Janakiraman V, Hincapie M, Lyubarskaya Y, Weiskopf A, Hancock WS. PMID: 22556165.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    38. Standard guidelines for the chromosome-centric human proteome project. J Proteome Res. 2012 Apr 06; 11(4):2005-13. Paik YK, Omenn GS, Uhlen M, Hanash S, Marko-Varga G, Aebersold R, Bairoch A, Yamamoto T, Legrain P, Lee HJ, Na K, Jeong SK, He F, Binz PA, Nishimura T, Keown P, Baker MS, Yoo JS, Garin J, Archakov A, Bergeron J, Salekdeh GH, Hancock WS. PMID: 22443261.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    39. The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome. Nat Biotechnol. 2012 Mar 07; 30(3):221-3. Paik YK, Jeong SK, Omenn GS, Uhlen M, Hanash S, Cho SY, Lee HJ, Na K, Choi EY, Yan F, Zhang F, Zhang Y, Snyder M, Cheng Y, Chen R, Marko-Varga G, Deutsch EW, Kim H, Kwon JY, Aebersold R, Bairoch A, Taylor AD, Kim KY, Lee EY, Hochstrasser D, Legrain P, Hancock WS. PMID: 22398612.
      View in: PubMed   Mentions: 66     Fields:    Translation:HumansCells
    40. A general approach for the purification and quantitative glycomic analysis of human plasma. Anal Bioanal Chem. 2012 Mar; 402(9):2687-700. Tep S, Hincapie M, Hancock WS. PMID: 22274286.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    41. Development of a Chip/Chip/SRM platform using digital chip isoelectric focusing and LC-Chip mass spectrometry for enrichment and quantitation of low abundance protein biomarkers in human plasma. J Proteome Res. 2012 Feb 03; 11(2):808-17. Rafalko A, Dai S, Hancock WS, Karger BL, Hincapie M. PMID: 22098410.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    42. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics. 2012 Jan; 12(1):11-20. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22069307.
      View in: PubMed   Mentions: 7     Fields:    
    43. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). J Proteome Res. 2012 Feb 03; 11(2):1412-9. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22053864.
      View in: PubMed   Mentions: 10     Fields:    
    44. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics Clin Appl. 2011 Dec; 5(11-12):580-9. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22213554.
      View in: PubMed   Mentions: 3     Fields:    
    45. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). Mol Cell Proteomics. 2011 Dec; 10(12):O111.015446. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22052993.
      View in: PubMed   Mentions: 9     Fields:    
    46. The human proteome project: current state and future direction. Mol Cell Proteomics. 2011 Jul; 10(7):M111.009993. Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers CH, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, Marko-Varga G, Salekdeh GH, Sechi S, Snyder M, Srivastava S, Uhlén M, Wu CH, Yamamoto T, Paik YK, Omenn GS. PMID: 21742803.
      View in: PubMed   Mentions: 87     Fields:    Translation:Humans
    47. A proteomics platform combining depletion, multi-lectin affinity chromatography (M-LAC), and isoelectric focusing to study the breast cancer proteome. Anal Chem. 2011 Jun 15; 83(12):4845-54. Zeng Z, Hincapie M, Pitteri SJ, Hanash S, Schalkwijk J, Hogan JM, Wang H, Hancock WS. PMID: 21513341.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    48. The human proteome project: Current state and future direction. Mol Cell Proteomics. 2011 Apr 29. Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers C, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, Marko-Varga G, Salekdeh GH, Sechi S, Snyder M, Srivastava S, Uhlen M, Hu CH, Yamamoto T, Paik YK, Omenn GS. PMID: 21531903.
      View in: PubMed   Mentions: 11     Fields:    
    49. Proteomics, human proteome project, and chromosomes. J Proteome Res. 2011 Jan 07; 10(1):210. Hancock W, Omenn G, Legrain P, Paik YK. PMID: 21114295.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    50. The lectin riddle: glycoproteins fractionated from complex mixtures have similar glycomic profiles. OMICS. 2010 Aug; 14(4):487-99. Lee A, Nakano M, Hincapie M, Kolarich D, Baker MS, Hancock WS, Packer NH. PMID: 20726804.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    51. The development of an integrated platform to identify breast cancer glycoproteome changes in human serum. J Chromatogr A. 2010 May 07; 1217(19):3307-15. Zeng Z, Hincapie M, Haab BB, Hanash S, Pitteri SJ, Kluck S, Hogan JM, Kennedy J, Hancock WS. PMID: 19782370.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    52. Towards an integrated proteomic and glycomic approach to finding cancer biomarkers. Genome Med. 2009 Jun 04; 1(6):57. Taylor AD, Hancock WS, Hincapie M, Taniguchi N, Hanash SM. PMID: 19519948.
      View in: PubMed   Mentions: 17     Fields:    
    53. Study of the human plasma proteome of rheumatoid arthritis. J Chromatogr A. 2009 Apr 17; 1216(16):3538-45. Zheng X, Wu SL, Hincapie M, Hancock WS. PMID: 19215933.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    54. A two step fractionation approach for plasma proteomics using immunodepletion of abundant proteins and multi-lectin affinity chromatography: Application to the analysis of obesity, diabetes, and hypertension diseases. J Sep Sci. 2008 Apr; 31(6-7):1156-66. Dayarathna MK, Hancock WS, Hincapie M. PMID: 18306431.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    55. A proteomic analysis of the plasma glycoproteins of a MCF-7 mouse xenograft: a model system for the detection of tumor markers. J Proteome Res. 2008 Apr; 7(4):1542-54. Orazine CI, Hincapie M, Hancock WS, Hattersley M, Hanke JH. PMID: 18336003.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    56. Human Proteinpedia enables sharing of human protein data. Nat Biotechnol. 2008 Feb; 26(2):164-7. Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, Bustelo XR, Cagney G, Cantin GT, Cardasis HL, Celis JE, Chaerkady R, Chu F, Cole PA, Costello CE, Cotter RJ, Crockett D, DeLany JP, De Marzo AM, DeSouza LV, Deutsch EW, Dransfield E, Drewes G, Droit A, Dunn MJ, Elenitoba-Johnson K, Ewing RM, Van Eyk J, Faca V, Falkner J, Fang X, Fenselau C, Figeys D, Gagné P, Gelfi C, Gevaert K, Gimble JM, Gnad F, Goel R, Gromov P, Hanash SM, Hancock WS, Harsha HC, Hart G, Hays F, He F, Hebbar P, Helsens K, Hermeking H, Hide W, Hjernø K, Hochstrasser DF, Hofmann O, Horn DM, Hruban RH, Ibarrola N, James P, Jensen ON, Jensen PH, Jung P, Kandasamy K, Kheterpal I, Kikuno RF, Korf U, Körner R, Kuster B, Kwon MS, Lee HJ, Lee YJ, Lefevre M, Lehvaslaiho M, Lescuyer P, Levander F, Lim MS, Löbke C, Loo JA, Mann M, Martens L, Martinez-Heredia J, McComb M, McRedmond J, Mehrle A, Menon R, Miller CA, Mischak H, Mohan SS, Mohmood R, Molina H, Moran MF, Morgan JD, Moritz R, Morzel M, Muddiman DC, Nalli A, Navarro JD, Neubert TA, Ohara O, Oliva R, Omenn GS, Oyama M, Paik YK, Pennington K, Pepperkok R, Periaswamy B, Petricoin EF, Poirier GG, Prasad TS, Purvine SO, Rahiman BA, Ramachandran P, Ramachandra YL, Rice RH, Rick J, Ronnholm RH, Salonen J, Sanchez JC, Sayd T, Seshi B, Shankari K, Sheng SJ, Shetty V, Shivakumar K, Simpson RJ, Sirdeshmukh R, Siu KW, Smith JC, Smith RD, States DJ, Sugano S, Sullivan M, Superti-Furga G, Takatalo M, Thongboonkerd V, Trinidad JC, Uhlen M, Vandekerckhove J, Vasilescu J, Veenstra TD, Vidal-Taboada JM, Vihinen M, Wait R, Wang X, Wiemann S, Wu B, Xu T, Yates JR, Zhong J, Zhou M, Zhu Y, Zurbig P, Pandey A. PMID: 18259167.
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    58. Proteomic analysis for the assessment of different lots of fetal bovine serum as a raw material for cell culture. Part IV. Application of proteomics to the manufacture of biological drugs. Biotechnol Prog. 2006 Sep-Oct; 22(5):1294-300. Zheng X, Baker H, Hancock WS, Fawaz F, McCaman M, Pungor E. PMID: 17022666.
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    59. Multilectin affinity chromatography for characterization of multiple glycoprotein biomarker candidates in serum from breast cancer patients. Clin Chem. 2006 Oct; 52(10):1897-905. Yang Z, Harris LE, Palmer-Toy DE, Hancock WS. PMID: 16916992.
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    60. Glycation of interferon-beta-1b and human serum albumin in a lyophilized glucose formulation. Part III: application of proteomic analysis to the manufacture of biological drugs. Int J Pharm. 2006 Sep 28; 322(1-2):136-45. Zheng X, Wu SL, Hancock WS. PMID: 16920285.
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    61. Analysis of the low molecular weight serum peptidome using ultrafiltration and a hybrid ion trap-Fourier transform mass spectrometer. J Chromatogr A. 2006 Jul 07; 1120(1-2):173-84. Zheng X, Baker H, Hancock WS. PMID: 16527286.
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    62. Approaches to the study of N-linked glycoproteins in human plasma using lectin affinity chromatography and nano-HPLC coupled to electrospray linear ion trap--Fourier transform mass spectrometry. Glycobiology. 2006 Jun; 16(6):514-23. Wang Y, Wu SL, Hancock WS. PMID: 16497783.
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    63. Rapid proteome analysis of bronchoalveolar lavage samples of lifelong smokers and never-smokers by micro-scale liquid chromatography and mass spectrometry. Clin Chem. 2006 Apr; 52(4):671-9. Plymoth A, Yang Z, Löfdahl CG, Ekberg-Jansson A, Dahlbäck M, Fehniger TE, Marko-Varga G, Hancock WS. PMID: 16497942.
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    67. Extended Range Proteomic Analysis (ERPA): a new and sensitive LC-MS platform for high sequence coverage of complex proteins with extensive post-translational modifications-comprehensive analysis of beta-casein and epidermal growth factor receptor (EGFR). J Proteome Res. 2005 Jul-Aug; 4(4):1155-70. Wu SL, Kim J, Hancock WS, Karger B. PMID: 16083266.
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    68. Monitoring glycosylation pattern changes of glycoproteins using multi-lectin affinity chromatography. J Chromatogr A. 2005 Apr 08; 1070(1-2):57-64. Yang Z, Hancock WS. PMID: 15861788.
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    70. Proteomic analysis of ductal carcinoma of the breast using laser capture microdissection, LC-MS, and 16O/18O isotopic labeling. J Proteome Res. 2004 May-Jun; 3(3):604-12. Zang L, Palmer Toy D, Hancock WS, Sgroi DC, Karger BL. PMID: 15253443.
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    71. Evaluation of shotgun sequencing for proteomic analysis of human plasma using HPLC coupled with either ion trap or Fourier transform mass spectrometry. J Proteome Res. 2003 Jul-Aug; 2(4):383-93. Wu SL, Choudhary G, Ramström M, Bergquist J, Hancock WS. PMID: 12938928.
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    72. An approach to the proteomic analysis of a breast cancer cell line (SKBR-3). Proteomics. 2003 Jun; 3(6):1037-46. Wu SL, Hancock WS, Goodrich GG, Kunitake ST. PMID: 12833528.
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    73. Multiple enzymatic digestion for enhanced sequence coverage of proteins in complex proteomic mixtures using capillary LC with ion trap MS/MS. J Proteome Res. 2003 Jan-Feb; 2(1):59-67. Choudhary G, Wu SL, Shieh P, Hancock WS. PMID: 12643544.
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    75. Targeted proteomics of low-level proteins in human plasma by LC/MSn: using human growth hormone as a model system. J Proteome Res. 2002 Sep-Oct; 1(5):459-65. Wu SL, Amato H, Biringer R, Choudhary G, Shieh P, Hancock WS. PMID: 12645918.
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    76. The challenges of developing a sound proteomics strategy. Proteomics. 2002 Apr; 2(4):352-9. Hancock WS, Wu SL, Shieh P. PMID: 12164694.
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