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William Hancock

Title(s)Adjunct Professor, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Collapse Research 
    Collapse Research Activities and Funding
    Glycan Markers for the Early Detection of Breast Cancer
    NIH/NCI U01CA128427Sep 4, 2007 - Jun 30, 2013
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Liver disease-associated keratin 8 and 18 mutations modulate keratin acetylation and methylation. FASEB J. 2019 08; 33(8):9030-9043. Jang KH, Yoon HN, Lee J, Yi H, Park SY, Lee SY, Lim Y, Lee HJ, Cho JW, Paik YK, Hancock WS, Ku NO. PMID: 31199680.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    2. Advances in the Chromosome-Centric Human Proteome Project: looking to the future. Expert Rev Proteomics. 2017 12; 14(12):1059-1071. Paik YK, Omenn GS, Hancock WS, Lane L, Overall CM. PMID: 29039980.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    3. Systematic Proteogenomic Approach To Exploring a Novel Function for NHERF1 in Human Reproductive Disorder: Lessons for Exploring Missing Proteins. J Proteome Res. 2017 12 01; 16(12):4455-4467. Na K, Shin H, Cho JY, Jung SH, Lim J, Lim JS, Kim EA, Kim HS, Kang AR, Kim JH, Shin JM, Jeong SK, Kim CY, Park JY, Chung HM, Omenn GS, Hancock WS, Paik YK. PMID: 28960081.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    4. Progress in the Chromosome-Centric Human Proteome Project as Highlighted in the Annual Special Issue IV. J Proteome Res. 2016 11 04; 15(11):3945-3950. Paik YK, Overall CM, Deutsch EW, Hancock WS, Omenn GS. PMID: 27809547.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    5. Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1. J Proteome Res. 2016 11 04; 15(11):3961-3970. Deutsch EW, Overall CM, Van Eyk JE, Baker MS, Paik YK, Weintraub ST, Lane L, Martens L, Vandenbrouck Y, Kusebauch U, Hancock WS, Hermjakob H, Aebersold R, Moritz RL, Omenn GS. PMID: 27490519.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    6. Quantitative Profiling Identifies Potential Regulatory Proteins Involved in Development from Dauer Stage to L4 Stage in Caenorhabditis elegans. J Proteome Res. 2016 Feb 05; 15(2):531-9. Kim S, Lee HJ, Hahm JH, Jeong SK, Park DH, Hancock WS, Paik YK. PMID: 26751275.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    7. Integrated Proteomic and Genomic Analysis of Gastric Cancer Patient Tissues. J Proteome Res. 2015 Dec 04; 14(12):4995-5006. Yan JF, Kim H, Jeong SK, Lee HJ, Sethi MK, Lee LY, Beavis RC, Im H, Snyder MP, Hofree M, Ideker T, Wu SL, Paik YK, Fanayan S, Hancock WS. PMID: 26435392.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    8. Combination of Multiple Spectral Libraries Improves the Current Search Methods Used to Identify Missing Proteins in the Chromosome-Centric Human Proteome Project. J Proteome Res. 2015 Dec 04; 14(12):4959-66. Cho JY, Lee HJ, Jeong SK, Kim KY, Kwon KH, Yoo JS, Omenn GS, Baker MS, Hancock WS, Paik YK. PMID: 26330117.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    9. Recent Advances in the Chromosome-Centric Human Proteome Project: Missing Proteins in the Spot Light. J Proteome Res. 2015 Sep 04; 14(9):3409-14. Paik YK, Omenn GS, Overall CM, Deutsch EW, Hancock WS. PMID: 26337862.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    10. GenomewidePDB 2.0: A Newly Upgraded Versatile Proteogenomic Database for the Chromosome-Centric Human Proteome Project. J Proteome Res. 2015 Sep 04; 14(9):3710-9. Jeong SK, Hancock WS, Paik YK. PMID: 26272709.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    11. Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project. J Proteome Res. 2015 Sep 04; 14(9):3415-31. Horvatovich P, Lundberg EK, Chen YJ, Sung TY, He F, Nice EC, Goode RJ, Yu S, Ranganathan S, Baker MS, Domont GB, Velasquez E, Li D, Liu S, Wang Q, He QY, Menon R, Guan Y, Corrales FJ, Segura V, Casal JI, Pascual-Montano A, Albar JP, Fuentes M, Gonzalez-Gonzalez M, Diez P, Ibarrola N, Degano RM, Mohammed Y, Borchers CH, Urbani A, Soggiu A, Yamamoto T, Salekdeh GH, Archakov A, Ponomarenko E, Lisitsa A, Lichti CF, Mostovenko E, Kroes RA, Rezeli M, Végvári Á, Fehniger TE, Bischoff R, Vizcaíno JA, Deutsch EW, Lane L, Nilsson CL, Marko-Varga G, Omenn GS, Jeong SK, Lim JS, Paik YK, Hancock WS. PMID: 26076068.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    12. In-depth N-glycome profiling of paired colorectal cancer and non-tumorigenic tissues reveals cancer-, stage- and EGFR-specific protein N-glycosylation. Glycobiology. 2015 Oct; 25(10):1064-78. Sethi MK, Kim H, Park CK, Baker MS, Paik YK, Packer NH, Hancock WS, Fanayan S, Thaysen-Andersen M. PMID: 26085185.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    13. Quantitative proteomic analysis of paired colorectal cancer and non-tumorigenic tissues reveals signature proteins and perturbed pathways involved in CRC progression and metastasis. J Proteomics. 2015 Aug 03; 126:54-67. Sethi MK, Thaysen-Andersen M, Kim H, Park CK, Baker MS, Packer NH, Paik YK, Hancock WS, Fanayan S. PMID: 26054784.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    14. Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome. J Proteome Res. 2015 Feb 06; 14(2):603-8. Nilsson CL, Mostovenko E, Lichti CF, Ruggles K, Fenyö D, Rosenbloom KR, Hancock WS, Paik YK, Omenn GS, LaBaer J, Kroes RA, Uhlén M, Hober S, Végvári Á, Andrén PE, Sulman EP, Lang FF, Fuentes M, Carlsohn E, Emmett MR, Moskal JR, Berven FS, Fehniger TE, Marko-Varga G. PMID: 25369122.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    15. Identification of human complement factor B as a novel biomarker candidate for pancreatic ductal adenocarcinoma. J Proteome Res. 2014 Nov 07; 13(11):4878-88. Lee MJ, Na K, Jeong SK, Lim JS, Kim SA, Lee MJ, Song SY, Kim H, Hancock WS, Paik YK. PMID: 25057901.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    16. Abundance-ratio-based semiquantitative analysis of site-specific N-linked glycopeptides present in the plasma of hepatocellular carcinoma patients. J Proteome Res. 2014 May 02; 13(5):2328-38. Lee HJ, Cha HJ, Lim JS, Lee SH, Song SY, Kim H, Hancock WS, Yoo JS, Paik YK. PMID: 24628331.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    17. Genome-wide proteomics, Chromosome-Centric Human Proteome Project (C-HPP), part II. J Proteome Res. 2014 Jan 03; 13(1):1-4. Paik YK, Omenn GS, Thongboonkerd V, Marko-Varga G, Hancock WS. PMID: 24328071.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    18. Genome wide proteomics of ERBB2 and EGFR and other oncogenic pathways in inflammatory breast cancer. J Proteome Res. 2013 Jun 07; 12(6):2805-17. Zhang EY, Cristofanilli M, Robertson F, Reuben JM, Mu Z, Beavis RC, Im H, Snyder M, Hofree M, Ideker T, Omenn GS, Fanayan S, Jeong SK, Paik YK, Zhang AF, Wu SL, Hancock WS. PMID: 23647160.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    19. Development of a method to quantitate nematode pheromone for study of small-molecule metabolism in Caenorhabditis elegans. Anal Chem. 2013 Mar 05; 85(5):2681-8. Kim KY, Joo HJ, Kwon HW, Kim H, Hancock WS, Paik YK. PMID: 23347231.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    20. Comprehensive genome-wide proteomic analysis of human placental tissue for the Chromosome-Centric Human Proteome Project. J Proteome Res. 2013 Jun 07; 12(6):2458-66. Lee HJ, Jeong SK, Na K, Lee MJ, Lee SH, Lim JS, Cha HJ, Cho JY, Kwon JY, Kim H, Song SY, Yoo JS, Park YM, Kim H, Hancock WS, Paik YK. PMID: 23362793.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    21. Chromosome 11-centric human proteome analysis of human brain hippocampus tissue. J Proteome Res. 2013 Jan 04; 12(1):97-105. Kwon KH, Kim JY, Kim SY, Min HK, Lee HJ, Ji IJ, Kang T, Park GW, An HJ, Lee B, Ravid R, Ferrer I, Chung CK, Paik YK, Hancock WS, Park YM, Yoo JS. PMID: 23286719.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    22. A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17. J Proteome Res. 2013 Jan 04; 12(1):45-57. Liu S, Im H, Bairoch A, Cristofanilli M, Chen R, Deutsch EW, Dalton S, Fenyo D, Fanayan S, Gates C, Gaudet P, Hincapie M, Hanash S, Kim H, Jeong SK, Lundberg E, Mias G, Menon R, Mu Z, Nice E, Paik YK, Uhlen M, Wells L, Wu SL, Yan F, Zhang F, Zhang Y, Snyder M, Omenn GS, Beavis RC, Hancock WS. PMID: 23259914.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    23. A first step toward completion of a genome-wide characterization of the human proteome. J Proteome Res. 2013 Jan 04; 12(1):1-5. Marko-Varga G, Omenn GS, Paik YK, Hancock WS. PMID: 23256439.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    24. GenomewidePDB, a proteomic database exploring the comprehensive protein parts list and transcriptome landscape in human chromosomes. J Proteome Res. 2013 Jan 04; 12(1):106-11. Jeong SK, Lee HJ, Na K, Cho JY, Lee MJ, Kwon JY, Kim H, Park YM, Yoo JS, Hancock WS, Paik YK. PMID: 23252913.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    25. Uniting ENCODE with genome-wide proteomics. Nat Biotechnol. 2012 Nov; 30(11):1065-7. Paik YK, Hancock WS. PMID: 23138303.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    26. Standard guidelines for the chromosome-centric human proteome project. J Proteome Res. 2012 Apr 06; 11(4):2005-13. Paik YK, Omenn GS, Uhlen M, Hanash S, Marko-Varga G, Aebersold R, Bairoch A, Yamamoto T, Legrain P, Lee HJ, Na K, Jeong SK, He F, Binz PA, Nishimura T, Keown P, Baker MS, Yoo JS, Garin J, Archakov A, Bergeron J, Salekdeh GH, Hancock WS. PMID: 22443261.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    27. The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome. Nat Biotechnol. 2012 Mar 07; 30(3):221-3. Paik YK, Jeong SK, Omenn GS, Uhlen M, Hanash S, Cho SY, Lee HJ, Na K, Choi EY, Yan F, Zhang F, Zhang Y, Snyder M, Cheng Y, Chen R, Marko-Varga G, Deutsch EW, Kim H, Kwon JY, Aebersold R, Bairoch A, Taylor AD, Kim KY, Lee EY, Hochstrasser D, Legrain P, Hancock WS. PMID: 22398612.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansCells
    28. The human proteome project: current state and future direction. Mol Cell Proteomics. 2011 Jul; 10(7):M111.009993. Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers CH, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, Marko-Varga G, Salekdeh GH, Sechi S, Snyder M, Srivastava S, Uhlén M, Wu CH, Yamamoto T, Paik YK, Omenn GS. PMID: 21742803.
      View in: PubMed   Mentions: 79     Fields:    Translation:Humans
    29. The human proteome project: Current state and future direction. Mol Cell Proteomics. 2011 Apr 29. Legrain P, Aebersold R, Archakov A, Bairoch A, Bala K, Beretta L, Bergeron J, Borchers C, Corthals GL, Costello CE, Deutsch EW, Domon B, Hancock W, He F, Hochstrasser D, Marko-Varga G, Salekdeh GH, Sechi S, Snyder M, Srivastava S, Uhlen M, Hu CH, Yamamoto T, Paik YK, Omenn GS. PMID: 21531903.
      View in: PubMed   Mentions: 11     Fields:    
    30. Proteomics, human proteome project, and chromosomes. J Proteome Res. 2011 Jan 07; 10(1):210. Hancock W, Omenn G, Legrain P, Paik YK. PMID: 21114295.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    31. Human Proteinpedia enables sharing of human protein data. Nat Biotechnol. 2008 Feb; 26(2):164-7. Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, Bustelo XR, Cagney G, Cantin GT, Cardasis HL, Celis JE, Chaerkady R, Chu F, Cole PA, Costello CE, Cotter RJ, Crockett D, DeLany JP, De Marzo AM, DeSouza LV, Deutsch EW, Dransfield E, Drewes G, Droit A, Dunn MJ, Elenitoba-Johnson K, Ewing RM, Van Eyk J, Faca V, Falkner J, Fang X, Fenselau C, Figeys D, Gagné P, Gelfi C, Gevaert K, Gimble JM, Gnad F, Goel R, Gromov P, Hanash SM, Hancock WS, Harsha HC, Hart G, Hays F, He F, Hebbar P, Helsens K, Hermeking H, Hide W, Hjernø K, Hochstrasser DF, Hofmann O, Horn DM, Hruban RH, Ibarrola N, James P, Jensen ON, Jensen PH, Jung P, Kandasamy K, Kheterpal I, Kikuno RF, Korf U, Körner R, Kuster B, Kwon MS, Lee HJ, Lee YJ, Lefevre M, Lehvaslaiho M, Lescuyer P, Levander F, Lim MS, Löbke C, Loo JA, Mann M, Martens L, Martinez-Heredia J, McComb M, McRedmond J, Mehrle A, Menon R, Miller CA, Mischak H, Mohan SS, Mohmood R, Molina H, Moran MF, Morgan JD, Moritz R, Morzel M, Muddiman DC, Nalli A, Navarro JD, Neubert TA, Ohara O, Oliva R, Omenn GS, Oyama M, Paik YK, Pennington K, Pepperkok R, Periaswamy B, Petricoin EF, Poirier GG, Prasad TS, Purvine SO, Rahiman BA, Ramachandran P, Ramachandra YL, Rice RH, Rick J, Ronnholm RH, Salonen J, Sanchez JC, Sayd T, Seshi B, Shankari K, Sheng SJ, Shetty V, Shivakumar K, Simpson RJ, Sirdeshmukh R, Siu KW, Smith JC, Smith RD, States DJ, Sugano S, Sullivan M, Superti-Furga G, Takatalo M, Thongboonkerd V, Trinidad JC, Uhlen M, Vandekerckhove J, Vasilescu J, Veenstra TD, Vidal-Taboada JM, Vihinen M, Wait R, Wang X, Wiemann S, Wu B, Xu T, Yates JR, Zhong J, Zhou M, Zhu Y, Zurbig P, Pandey A. PMID: 18259167.
      View in: PubMed   Mentions: 68     Fields:    
    32. A functional annotation of subproteomes in human plasma. Proteomics. 2005 Aug; 5(13):3506-19. Ping P, Vondriska TM, Creighton CJ, Gandhi TK, Yang Z, Menon R, Kwon MS, Cho SY, Drwal G, Kellmann M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, Rekha B, Shet AS, Gerszten RE, Wu H, Raftery M, Wasinger V, Schulz-Knappe P, Hanash SM, Paik YK, Hancock WS, States DJ, Omenn GS, Pandey A. PMID: 16104058.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    33. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 2005 Aug; 5(13):3226-45. Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik YK, Yoo JS, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SM. PMID: 16104056.
      View in: PubMed   Mentions: 208     Fields:    Translation:Humans
    34. Deamidation and isoaspartate formation during in vitro aging of recombinant tissue plasminogen activator. J Biol Chem. 1994 Jan 07; 269(1):243-53. Paranandi MV, Guzzetta AW, Hancock WS, Aswad DW. PMID: 8276801.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    35. Formation of isoaspartate at two distinct sites during in vitro aging of human growth hormone. J Biol Chem. 1989 Aug 25; 264(24):14262-71. Johnson BA, Shirokawa JM, Hancock WS, Spellman MW, Basa LJ, Aswad DW. PMID: 2760065.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansAnimalsCells
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