Our site may be slower due to heavy traffic from automated "bots" and AI crawlers. We're working to fix this.

Timothy Baker

Title(s)Emeritus Professor, Molecular Biology
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
vCardDownload vCard

    Collapse Research 
    Collapse research activities and funding
    Parallel Software for Fast, Automated Determination of Virus Structures
    NIH R01GM087708Jun 1, 2010 - May 31, 2014
    Role: Principal Investigator
    Parallel Software for Fast, Automated Determination of Virus Structures
    NIH R56AI079095May 15, 2009 - Apr 30, 2010
    Role: Principal Investigator
    Transmission Electron Microscope
    NIH S10RR020016Jul 15, 2004 - Jul 14, 2005
    Role: Principal Investigator
    National Resource for Automated Molecular Microscopy
    NIH P41RR017573Sep 30, 2002 - Jul 31, 2012
    Role: Co-Investigator
    Virus Assembly and Transmission
    NIH P01AI045976Sep 1, 1999 - Jul 31, 2010
    Role: Co-Investigator
    STRUCTURAL BASIS FOR VIRAL INFECTION
    NIH P01AI035212Jan 1, 1994 - Dec 31, 1998
    Role: Co-Investigator
    THREE-DIMENSIONAL ELECTRON MICROSCOPY OF MACROMOLECULES
    NIH R13GM049914Jun 25, 1993 - Jun 24, 1994
    Role: Principal Investigator
    Microscopy & Image Analysis of Unstained Macromolecules
    NIH R01GM033050Jun 1, 1983 - May 31, 2019
    Role: Principal Investigator
    Microscopy & Image Analysis of Unstained Macromolecules
    NIH R37GM033050Jun 1, 1983 - Aug 31, 2014
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Correction for Gurda et al., "Mapping a Neutralizing Epitope onto the Capsid of Adeno-Associated Virus Serotype 8". J Virol. 2025 Jul 22; 99(7):e0079225. Gurda BL, Raupp C, Popa-Wagner R, Naumer M, Olson NH, Ng R, McKenna R, Baker TS, Kleinschmidt JA, Agbandje-McKenna M. PMID: 40503917; PMCID: PMC12282185.
      View in: PubMed   Mentions:    Fields:    
    2. Effect of climate on traits of dominant and rare tree species in the world's forests. Nat Commun. 2025 May 22; 16(1):4773. Hordijk I, Poorter L, Liang J, Reich PB, de-Miguel S, Nabuurs GJ, Gamarra JGP, Chen HYH, Zhou M, Wiser SK, Pretzsch H, Paquette A, Picard N, Hérault B, Bastin JF, Alberti G, Abegg M, Adou Yao YC, Almeyda Zambrano AM, Alvarado BV, Alvarez-Davila E, Alvarez-Loayza P, Alves LF, Amaral I, Ammer C, Antón-Fernández C, Araujo-Murakami A, Arroyo L, Avitabile V, Aymard C GA, Baker T, Banki O, Barroso J, Bastian ML, Birigazzi L, Birnbaum P, Bitariho R, Boeckx P, Bongers F, Bouriaud O, Brancalion PHS, Brandl S, Brearley FQ, Brienen R, Broadbent EN, Bruelheide H, Cazzolla Gatti R, Cesar RG, Cesljar G, Chazdon RL, Chisholm C, Cienciala E, Clark CJ, Clark DB, Colletta G, Coomes D, Cornejo Valverde F, Corral-Rivas JJ, Crim P, Cumming J, Dayanandan S, de Gasper AL, Decuyper M, Derroire G, DeVries B, Djordjevic I, Dourdain A, Dolezal J, Engone Obiang NL, Enquist B, Eyre T, Fandohan AB, Fayle TM, Ferreira LV, Feldpausch TR, Finér L, Fischer M, Fletcher C, Frizzera L, Gianelle D, Glick HB, Harris D, Hector A, Hemp A, Herbohn J, Hillers A, Honorio Coronado EN, Hui C, Cho H, Ibanez T, Jung I, Imai N, Jagodzinski AM, Jaroszewicz B, Johannsen V, Joly CA, Jucker T, Karminov V, Kartawinata K, Kearsley E, Kenfack D, Kennard D, Kepfer-Rojas S, Keppel G, Khan ML, Killeen T, Kim HS, Kitayama K, Köhl M, Korjus H, Kraxner F, Laarmann D, Lang M, Lewis S, Lu H, Lukina N, Maitner B, Malhi Y, Marcon E, Marimon BS, Marimon-Junior BH, Marshall AR, Martin E, Martynenko O, Meave JA, Melo-Cruz O, Mendoza C, Merow C, Miscicki S, Monteagudo Mendoza A, Moreno V, Mukul SA, Mundhenk P, Nava-Miranda MG, Neill D, Neldner V, Nevenic R, Ngugi M, Niklaus PA, Oleksyn J, Ontikov P, Ortiz-Malavasi E, Pan Y, Parada-Gutierrez A, Parfenova E, Park M, Parren M, Parthasarathy N, Peri PL, Pfautsch S, Phillips OL, Piedade MT, Piotto D, Pitman NCA, Pollastrini M, Polo I, Poulsen AD, Poulsen JR, Arevalo FR, Restrepo-Correa Z, Rodeghiero M, Rolim S, Roopsind A, Rovero F, Rutishauser E, Saikia P, Salas-Eljatib C, Schall P, Schepaschenko D, Scherer-Lorenzen M, Schmid B, Schöngart J, Searle EB, Seben V, Selvi F, Serra-Diaz JM, Sheil D, Shvidenko A, Silva-Espejo J, Silveira M, Singh J, Sist P, Slik F, Sonké B, Souza AF, Ter Steege H, Sterenczak K, Svenning JC, Svoboda M, Swanepoel B, Targhetta N, Tchebakova N, Thomas R, Tikhonova E, Umunay P, Usoltsev V, Valencia R, Valladares F, van der Plas F, Van Do T, Van Nuland ME, Vasquez Martinez R, Verbeeck H, Viana H, Vibrans AC, Vieira S, von Gadow K, Wang HF, Watson J, Werner GDA, Wittmann F, Wortel V, Zagt R, Zawila-Niedzwiecki T, Zhang C, Zhao X, Zhu ZX, Zo-Bi IC, Maynard DS, Crowther TW. PMID: 40404639; PMCID: PMC12098762.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    3. The pace of life for forest trees. Science. 2024 10 04; 386(6717):92-98. Bialic-Murphy L, McElderry RM, Esquivel-Muelbert A, van den Hoogen J, Zuidema PA, Phillips OL, de Oliveira EA, Loayza PA, Alvarez-Davila E, Alves LF, Maia VA, Vieira SA, Arantes da Silva LC, Araujo-Murakami A, Arets E, Astigarraga J, Baccaro F, Baker T, Banki O, Barroso J, Blanc L, Bonal D, Bongers F, Bordin KM, Brienen R, de Medeiros MB, Camargo JL, Araújo FC, Castilho CV, Castro W, Moscoso VC, Comiskey J, Costa F, Müller SC, de Almeida EC, Lôla da Costa AC, de Andrade Kamimura V, de Oliveira F, Del Aguila Pasquel J, Derroire G, Dexter K, Di Fiore A, Duchesne L, Emílio T, Farrapo CL, Fauset S, Draper FC, Feldpausch TR, Ramos RF, Martins VF, Simon MF, Reis MG, Manzatto AG, Herault B, Herrera R, Coronado EH, Howe R, Huamantupa-Chuquimaco I, Huasco WH, Zanini KJ, Joly C, Killeen T, Klipel J, Laurance SG, Laurance WF, Fontes MAL, Oviedo WL, Magnusson WE, Dos Santos RM, Peña JLM, de Abreu KMP, Marimon B, Junior BHM, Melgaço K, Melo Cruz OA, Mendoza C, Monteagudo-Mendoza A, Morandi PS, Gianasi FM, Nascimento H, Nascimento M, Neill D, Palacios W, Camacho NCP, Pardo G, Pennington RT, Peñuela-Mora MC, Pitman NCA, Poorter L, Cruz AP, Ramírez-Angulo H, Reis SM, Correa ZR, Rodriguez CR, Lleras AR, Santos FAM, Bergamin RS, Schietti J, Schwartz G, Serrano J, Silva-Sene AM, Silveira M, Stropp J, Ter Steege H, Terborgh J, Tobler MW, Gamarra LV, van der Meer PJ, van der Heijden G, Vasquez R, Vilanova E, Vos VA, Wolf A, Woodall CW, Wortel V, Zwerts JA, Pugh TAM, Crowther TW. PMID: 39361744.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    4. Precision health diagnostic and surveillance network uses S gene target failure (SGTF) combined with sequencing technologies to track emerging SARS-CoV-2 variants. Immun Inflamm Dis. 2022 06; 10(6):e634. Guerrero-Preston R, Rivera-Amill V, Caraballo K, Rodríguez-Torres S, Purcell-Wiltz A, García AA, Torres RS, Zamuner FT, Zanettini C, MacKay MJ, Baits R, Salgado D, Khullar G, Metti J, Baker T, Dudley J, Vale K, Pérez G, De Jesús L, Miranda Y, Ortiz D, García-Negrón A, Viera L, Ortiz A, Canabal JA, Romaguera J, Jiménez-Velázquez I, Marchionni L, Rodríguez-Orengo JF, Baez A, Mason CE, Sidransky D. PMID: 35634961; PMCID: PMC9092005.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    5. Constructing protein polyhedra via orthogonal chemical interactions. Nature. 2020 02; 578(7793):172-176. Golub E, Subramanian RH, Esselborn J, Alberstein RG, Bailey JB, Chiong JA, Yan X, Booth T, Baker TS, Tezcan FA. PMID: 31969701; PMCID: PMC7007351.
      View in: PubMed   Mentions: 49     Fields:    
    6. TRY plant trait database - enhanced coverage and open access. Glob Chang Biol. 2020 01; 26(1):119-188. Kattge J, Bönisch G, Díaz S, Lavorel S, Prentice IC, Leadley P, Tautenhahn S, Werner GDA, Aakala T, Abedi M, Acosta ATR, Adamidis GC, Adamson K, Aiba M, Albert CH, Alcántara JM, Alcázar C C, Aleixo I, Ali H, Amiaud B, Ammer C, Amoroso MM, Anand M, Anderson C, Anten N, Antos J, Apgaua DMG, Ashman TL, Asmara DH, Asner GP, Aspinwall M, Atkin O, Aubin I, Baastrup-Spohr L, Bahalkeh K, Bahn M, Baker T, Baker WJ, Bakker JP, Baldocchi D, Baltzer J, Banerjee A, Baranger A, Barlow J, Barneche DR, Baruch Z, Bastianelli D, Battles J, Bauerle W, Bauters M, Bazzato E, Beckmann M, Beeckman H, Beierkuhnlein C, Bekker R, Belfry G, Belluau M, Beloiu M, Benavides R, Benomar L, Berdugo-Lattke ML, Berenguer E, Bergamin R, Bergmann J, Bergmann Carlucci M, Berner L, Bernhardt-Römermann M, Bigler C, Bjorkman AD, Blackman C, Blanco C, Blonder B, Blumenthal D, Bocanegra-González KT, Boeckx P, Bohlman S, Böhning-Gaese K, Boisvert-Marsh L, Bond W, Bond-Lamberty B, Boom A, Boonman CCF, Bordin K, Boughton EH, Boukili V, Bowman DMJS, Bravo S, Brendel MR, Broadley MR, Brown KA, Bruelheide H, Brumnich F, Bruun HH, Bruy D, Buchanan SW, Bucher SF, Buchmann N, Buitenwerf R, Bunker DE, Bürger J, Burrascano S, Burslem DFRP, Butterfield BJ, Byun C, Marques M, Scalon MC, Caccianiga M, Cadotte M, Cailleret M, Camac J, Camarero JJ, Campany C, Campetella G, Campos JA, Cano-Arboleda L, Canullo R, Carbognani M, Carvalho F, Casanoves F, Castagneyrol B, Catford JA, Cavender-Bares J, Cerabolini BEL, Cervellini M, Chacón-Madrigal E, Chapin K, Chapin FS, Chelli S, Chen SC, Chen A, Cherubini P, Chianucci F, Choat B, Chung KS, Chytrý M, Ciccarelli D, Coll L, Collins CG, Conti L, Coomes D, Cornelissen JHC, Cornwell WK, Corona P, Coyea M, Craine J, Craven D, Cromsigt JPGM, Csecserits A, Cufar K, Cuntz M, da Silva AC, Dahlin KM, Dainese M, Dalke I, Dalle Fratte M, Dang-Le AT, Danihelka J, Dannoura M, Dawson S, de Beer AJ, De Frutos A, De Long JR, Dechant B, Delagrange S, Delpierre N, Derroire G, Dias AS, Diaz-Toribio MH, Dimitrakopoulos PG, Dobrowolski M, Doktor D, Drevojan P, Dong N, Dransfield J, Dressler S, Duarte L, Ducouret E, Dullinger S, Durka W, Duursma R, Dymova O, E-Vojtkó A, Eckstein RL, Ejtehadi H, Elser J, Emilio T, Engemann K, Erfanian MB, Erfmeier A, Esquivel-Muelbert A, Esser G, Estiarte M, Domingues TF, Fagan WF, Fagúndez J, Falster DS, Fan Y, Fang J, Farris E, Fazlioglu F, Feng Y, Fernandez-Mendez F, Ferrara C, Ferreira J, Fidelis A, Finegan B, Firn J, Flowers TJ, Flynn DFB, Fontana V, Forey E, Forgiarini C, François L, Frangipani M, Frank D, Frenette-Dussault C, Freschet GT, Fry EL, Fyllas NM, Mazzochini GG, Gachet S, Gallagher R, Ganade G, Ganga F, García-Palacios P, Gargaglione V, Garnier E, Garrido JL, de Gasper AL, Gea-Izquierdo G, Gibson D, Gillison AN, Giroldo A, Glasenhardt MC, Gleason S, Gliesch M, Goldberg E, Göldel B, Gonzalez-Akre E, Gonzalez-Andujar JL, González-Melo A, González-Robles A, Graae BJ, Granda E, Graves S, Green WA, Gregor T, Gross N, Guerin GR, Günther A, Gutiérrez AG, Haddock L, Haines A, Hall J, Hambuckers A, Han W, Harrison SP, Hattingh W, Hawes JE, He T, He P, Heberling JM, Helm A, Hempel S, Hentschel J, Hérault B, Heres AM, Herz K, Heuertz M, Hickler T, Hietz P, Higuchi P, Hipp AL, Hirons A, Hock M, Hogan JA, Holl K, Honnay O, Hornstein D, Hou E, Hough-Snee N, Hovstad KA, Ichie T, Igic B, Illa E, Isaac M, Ishihara M, Ivanov L, Ivanova L, Iversen CM, Izquierdo J, Jackson RB, Jackson B, Jactel H, Jagodzinski AM, Jandt U, Jansen S, Jenkins T, Jentsch A, Jespersen JRP, Jiang GF, Johansen JL, Johnson D, Jokela EJ, Joly CA, Jordan GJ, Joseph GS, Junaedi D, Junker RR, Justes E, Kabzems R, Kane J, Kaplan Z, Kattenborn T, Kavelenova L, Kearsley E, Kempel A, Kenzo T, Kerkhoff A, Khalil MI, Kinlock NL, Kissling WD, Kitajima K, Kitzberger T, Kjøller R, Klein T, Kleyer M, Klimešová J, Klipel J, Kloeppel B, Klotz S, Knops JMH, Kohyama T, Koike F, Kollmann J, Komac B, Komatsu K, König C, Kraft NJB, Kramer K, Kreft H, Kühn I, et al. PMID: 31891233.
      View in: PubMed   Mentions: 280     Fields:    Translation:Animals
    7. The Forest Observation System, building a global reference dataset for remote sensing of forest biomass. Sci Data. 2019 10 10; 6(1):198. Schepaschenko D, Chave J, Phillips OL, Lewis SL, Davies SJ, Réjou-Méchain M, Sist P, Scipal K, Perger C, Herault B, Labrière N, Hofhansl F, Affum-Baffoe K, Aleinikov A, Alonso A, Amani C, Araujo-Murakami A, Armston J, Arroyo L, Ascarrunz N, Azevedo C, Baker T, Balazy R, Bedeau C, Berry N, Bilous AM, Bilous SY, Bissiengou P, Blanc L, Bobkova KS, Braslavskaya T, Brienen R, Burslem DFRP, Condit R, Cuni-Sanchez A, Danilina D, Del Castillo Torres D, Derroire G, Descroix L, Sotta ED, d'Oliveira MVN, Dresel C, Erwin T, Evdokimenko MD, Falck J, Feldpausch TR, Foli EG, Foster R, Fritz S, Garcia-Abril AD, Gornov A, Gornova M, Gothard-Bassébé E, Gourlet-Fleury S, Guedes M, Hamer KC, Susanty FH, Higuchi N, Coronado ENH, Hubau W, Hubbell S, Ilstedt U, Ivanov VV, Kanashiro M, Karlsson A, Karminov VN, Killeen T, Koffi JK, Konovalova M, Kraxner F, Krejza J, Krisnawati H, Krivobokov LV, Kuznetsov MA, Lakyda I, Lakyda PI, Licona JC, Lucas RM, Lukina N, Lussetti D, Malhi Y, Manzanera JA, Marimon B, Junior BHM, Martinez RV, Martynenko OV, Matsala M, Matyashuk RK, Mazzei L, Memiaghe H, Mendoza C, Mendoza AM, Moroziuk OV, Mukhortova L, Musa S, Nazimova DI, Okuda T, Oliveira LC, Ontikov PV, Osipov AF, Pietsch S, Playfair M, Poulsen J, Radchenko VG, Rodney K, Rozak AH, Ruschel A, Rutishauser E, See L, Shchepashchenko M, Shevchenko N, Shvidenko A, Silveira M, Singh J, Sonké B, Souza C, Sterenczak K, Stonozhenko L, Sullivan MJP, Szatniewska J, Taedoumg H, Ter Steege H, Tikhonova E, Toledo M, Trefilova OV, Valbuena R, Gamarra LV, Vasiliev S, Vedrova EF, Verhovets SV, Vidal E, Vladimirova NA, Vleminckx J, Vos VA, Vozmitel FK, Wanek W, West TAP, Woell H, Woods JT, Wortel V, Yamada T, Nur Hajar ZS, Zo-Bi IC. PMID: 31601817; PMCID: PMC6787017.
      View in: PubMed   Mentions: 6     Fields:    Translation:PHPublic Health
    8. Cryo-EM Structures of a Group II Intron Reverse Splicing into DNA. Cell. 2019 07 25; 178(3):612-623.e12. Haack DB, Yan X, Zhang C, Hingey J, Lyumkis D, Baker TS, Toor N. PMID: 31348888; PMCID: PMC6662634.
      View in: PubMed   Mentions: 38     Fields:    Translation:Cells
    9. Self-Assembly of a Designed Nucleoprotein Architecture through Multimodal Interactions. ACS Cent Sci. 2018 Nov 28; 4(11):1578-1586. Subramanian RH, Smith SJ, Alberstein RG, Bailey JB, Zhang L, Cardone G, Suominen L, Chami M, Stahlberg H, Baker TS, Tezcan FA. PMID: 30555911; PMCID: PMC6276041.
      View in: PubMed   Mentions: 10  
    10. Atomic structures of enterovirus D68 in complex with two monoclonal antibodies define distinct mechanisms of viral neutralization. Nat Microbiol. 2019 01; 4(1):124-133. Zheng Q, Zhu R, Xu L, He M, Yan X, Liu D, Yin Z, Wu Y, Li Y, Yang L, Hou W, Li S, Li Z, Chen Z, Li Z, Yu H, Gu Y, Zhang J, Baker TS, Zhou ZH, Graham BS, Cheng T, Li S, Xia N. PMID: 30397341; PMCID: PMC6727974.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    11. Discovery and structural characterization of a therapeutic antibody against coxsackievirus A10. Sci Adv. 2018 09; 4(9):eaat7459. Zhu R, Xu L, Zheng Q, Cui Y, Li S, He M, Yin Z, Liu D, Li S, Li Z, Chen Z, Yu H, Que Y, Liu C, Kong Z, Zhang J, Baker TS, Yan X, Hong Zhou Z, Cheng T, Xia N. PMID: 30255146; PMCID: PMC6155056.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    12. Sub-2 Å Ewald curvature corrected structure of an AAV2 capsid variant. Nat Commun. 2018 09 07; 9(1):3628. Tan YZ, Aiyer S, Mietzsch M, Hull JA, McKenna R, Grieger J, Samulski RJ, Baker TS, Agbandje-McKenna M, Lyumkis D. PMID: 30194371; PMCID: PMC6128836.
      View in: PubMed   Mentions: 46     Fields:    Translation:Cells
    13. Cryo-EM Elucidation of the Structure of Bacteriophage P22 Virions after Genome Release. Biophys J. 2018 03 27; 114(6):1295-1301. McNulty R, Cardone G, Gilcrease EB, Baker TS, Casjens SR, Johnson JE. PMID: 29590587; PMCID: PMC5883611.
      View in: PubMed   Mentions: 12     Fields:    Translation:Cells
    14. Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction. Viruses. 2017 10 30; 9(11). Pittman N, Misseldine A, Geilen L, Halder S, Smith JK, Kurian J, Chipman P, Janssen M, Mckenna R, Baker TS, D'Abramo A, Cotmore S, Tattersall P, Agbandje-McKenna M. PMID: 29084163; PMCID: PMC5707528.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    15. Crystal Structures of Two Immune Complexes Identify Determinants for Viral Infectivity and Type-Specific Neutralization of Human Papillomavirus. mBio. 2017 09 26; 8(5). Li Z, Wang D, Gu Y, Song S, He M, Shi J, Liu X, Wei S, Li J, Yu H, Zheng Q, Yan X, Baker TS, Zhang J, McLellan JS, Li S, Xia N. PMID: 28951471; PMCID: PMC5615192.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    16. Atomic structures of Coxsackievirus A6 and its complex with a neutralizing antibody. Nat Commun. 2017 09 11; 8(1):505. Xu L, Zheng Q, Li S, He M, Wu Y, Li Y, Zhu R, Yu H, Hong Q, Jiang J, Li Z, Li S, Zhao H, Yang L, Hou W, Wang W, Ye X, Zhang J, Baker TS, Cheng T, Zhou ZH, Yan X, Xia N. PMID: 28894095; PMCID: PMC5593947.
      View in: PubMed   Mentions: 53     Fields:    Translation:HumansAnimalsCells
    17. Structural Insights into Human Bocaparvoviruses. J Virol. 2017 06 01; 91(11). Mietzsch M, Kailasan S, Garrison J, Ilyas M, Chipman P, Kantola K, Janssen ME, Spear J, Sousa D, McKenna R, Brown K, Söderlund-Venermo M, Baker T, Agbandje-McKenna M. PMID: 28331084; PMCID: PMC5432872.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    18. Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging. J Virol. 2016 10 01; 90(19):8542-51. Drouin LM, Lins B, Janssen M, Bennett A, Chipman P, McKenna R, Chen W, Muzyczka N, Cardone G, Baker TS, Agbandje-McKenna M. PMID: 27440903; PMCID: PMC5021403.
      View in: PubMed   Mentions: 29     Fields:    Translation:Cells
    19. Genetic Risk Can Be Decreased: Quitting Smoking Decreases and Delays Lung Cancer for Smokers With High and Low CHRNA5 Risk Genotypes - A Meta-Analysis. EBioMedicine. 2016 Sep; 11:219-226. Chen LS, Baker T, Hung RJ, Horton A, Culverhouse R, Hartz S, Saccone N, Cheng I, Deng B, Han Y, Hansen HM, Horsman J, Kim C, Rosenberger A, Aben KK, Andrew AS, Chang SC, Saum KU, Dienemann H, Hatsukami DK, Johnson EO, Pande M, Wrensch MR, McLaughlin J, Skaug V, van der Heijden EH, Wampfler J, Wenzlaff A, Woll P, Zienolddiny S, Bickeböller H, Brenner H, Duell EJ, Haugen A, Brüske I, Kiemeney LA, Lazarus P, Le Marchand L, Liu G, Mayordomo J, Risch A, Schwartz AG, Teare MD, Wu X, Wiencke JK, Yang P, Zhang ZF, Spitz MR, Amos CI, Bierut LJ. PMID: 27543155; PMCID: PMC5049934.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    20. The C-Terminal Arm of the Human Papillomavirus Major Capsid Protein Is Immunogenic and Involved in Virus-Host Interaction. Structure. 2016 06 07; 24(6):874-85. Li Z, Yan X, Yu H, Wang D, Song S, Li Y, He M, Hong Q, Zheng Q, Zhao Q, Gu Y, Zhang J, Janssen ME, Cardone G, Olson NH, Baker TS, Li S, Xia N. PMID: 27276427; PMCID: PMC5595370.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    21. Self-assembly of coherently dynamic, auxetic, two-dimensional protein crystals. Nature. 2016 05 19; 533(7603):369-73. Suzuki Y, Cardone G, Restrepo D, Zavattieri PD, Baker TS, Tezcan FA. PMID: 27135928; PMCID: PMC4991361.
      View in: PubMed   Mentions: 72     Fields:    Translation:Cells
    22. Fluorescent Protein-Tagged Sindbis Virus E2 Glycoprotein Allows Single Particle Analysis of Virus Budding from Live Cells. Viruses. 2015 Nov 27; 7(12):6182-99. Jose J, Tang J, Taylor AB, Baker TS, Kuhn RJ. PMID: 26633461; PMCID: PMC4690852.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    23. CHRNA5 risk variant predicts delayed smoking cessation and earlier lung cancer diagnosis--a meta-analysis. J Natl Cancer Inst. 2015 May; 107(5). Chen LS, Hung RJ, Baker T, Horton A, Culverhouse R, Saccone N, Cheng I, Deng B, Han Y, Hansen HM, Horsman J, Kim C, Lutz S, Rosenberger A, Aben KK, Andrew AS, Breslau N, Chang SC, Dieffenbach AK, Dienemann H, Frederiksen B, Han J, Hatsukami DK, Johnson EO, Pande M, Wrensch MR, McLaughlin J, Skaug V, van der Heijden HF, Wampfler J, Wenzlaff A, Woll P, Zienolddiny S, Bickeböller H, Brenner H, Duell EJ, Haugen A, Heinrich J, Hokanson JE, Hunter DJ, Kiemeney LA, Lazarus P, Le Marchand L, Liu G, Mayordomo J, Risch A, Schwartz AG, Teare D, Wu X, Wiencke JK, Yang P, Zhang ZF, Spitz MR, Kraft P, Amos CI, Bierut LJ. PMID: 25873736; PMCID: PMC4822525.
      View in: PubMed   Mentions: 52     Fields:    Translation:Humans
    24. Adeno-associated virus serotype 1 (AAV1)- and AAV5-antibody complex structures reveal evolutionary commonalities in parvovirus antigenic reactivity. J Virol. 2015 Feb; 89(3):1794-808. Tseng YS, Gurda BL, Chipman P, McKenna R, Afione S, Chiorini JA, Muzyczka N, Olson NH, Baker TS, Kleinschmidt J, Agbandje-McKenna M. PMID: 25410874; PMCID: PMC4300747.
      View in: PubMed   Mentions: 56     Fields:    Translation:HumansCells
    25. Three-dimensional structure of a protozoal double-stranded RNA virus that infects the enteric pathogen Giardia lamblia. J Virol. 2015 Jan 15; 89(2):1182-94. Janssen ME, Takagi Y, Parent KN, Cardone G, Nibert ML, Baker TS. PMID: 25378500; PMCID: PMC4300635.
      View in: PubMed   Mentions: 28     Fields:    Translation:AnimalsCells
    26. Three-dimensional reconstructions of the bacteriophage CUS-3 virion reveal a conserved coat protein I-domain but a distinct tailspike receptor-binding domain. Virology. 2014 Sep; 464-465:55-66. Parent KN, Tang J, Cardone G, Gilcrease EB, Janssen ME, Olson NH, Casjens SR, Baker TS. PMID: 25043589; PMCID: PMC4157081.
      View in: PubMed   Mentions: 20     Fields:    Translation:Cells
    27. A novel partitivirus that confers hypovirulence on plant pathogenic fungi. J Virol. 2014 Sep 01; 88(17):10120-33. Xiao X, Cheng J, Tang J, Fu Y, Jiang D, Baker TS, Ghabrial SA, Xie J. PMID: 24965462; PMCID: PMC4136314.
      View in: PubMed   Mentions: 72     Fields:    Translation:AnimalsCells
    28. Dynamic and geometric analyses of Nudaurelia capensis ω virus maturation reveal the energy landscape of particle transitions. J Mol Recognit. 2014 Apr; 27(4):230-7. Tang J, Kearney BM, Wang Q, Doerschuk PC, Baker TS, Johnson JE. PMID: 24591180; PMCID: PMC3987702.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    29. OmpA and OmpC are critical host factors for bacteriophage Sf6 entry in Shigella. Mol Microbiol. 2014 Apr; 92(1):47-60. Parent KN, Erb ML, Cardone G, Nguyen K, Gilcrease EB, Porcek NB, Pogliano J, Baker TS, Casjens SR. PMID: 24673644; PMCID: PMC4034267.
      View in: PubMed   Mentions: 56     Fields:    Translation:Cells
    30. Single particle analysis integrated with microscopy: a high-throughput approach for reconstructing icosahedral particles. J Struct Biol. 2014 Apr; 186(1):8-18. Yan X, Cardone G, Zhang X, Zhou ZH, Baker TS. PMID: 24613762; PMCID: PMC4070310.
      View in: PubMed   Mentions: 1     Fields:    
    31. A Real-Time 3D Reconstruction System for Screening Icosahedral Particles Under Different Conditions at the Microscope. Microsc Microanal. 2013 Aug; 19(Suppl 2):764-765. Cardone G, Yan X, Sinkovits RS, Baker TS. PMID: 25242888; PMCID: PMC4166516.
      View in: PubMed   Mentions:    Fields:    
    32. Three-dimensional reconstruction of icosahedral particles from single micrographs in real time at the microscope. J Struct Biol. 2013 Sep; 183(3):329-341. Cardone G, Yan X, Sinkovits RS, Tang J, Baker TS. PMID: 23891839; PMCID: PMC3831522.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    33. Capsid antibodies to different adeno-associated virus serotypes bind common regions. J Virol. 2013 Aug; 87(16):9111-24. Gurda BL, DiMattia MA, Miller EB, Bennett A, McKenna R, Weichert WS, Nelson CD, Chen WJ, Muzyczka N, Olson NH, Sinkovits RS, Chiorini JA, Zolotutkhin S, Kozyreva OG, Samulski RJ, Baker TS, Parrish CR, Agbandje-McKenna M. PMID: 23760240; PMCID: PMC3754064.
      View in: PubMed   Mentions: 91     Fields:    Translation:HumansCells
    34. Structure of a protozoan virus from the human genitourinary parasite Trichomonas vaginalis. mBio. 2013 Apr 02; 4(2). Parent KN, Takagi Y, Cardone G, Olson NH, Ericsson M, Yang M, Lee Y, Asara JM, Fichorova RN, Baker TS, Nibert ML. PMID: 23549915; PMCID: PMC3622925.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansAnimalsCells
    35. Three-dimensional structure of victorivirus HvV190S suggests coat proteins in most totiviruses share a conserved core. PLoS Pathog. 2013 Mar; 9(3):e1003225. Dunn SE, Li H, Cardone G, Nibert ML, Ghabrial SA, Baker TS. PMID: 23516364; PMCID: PMC3597494.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    36. Atomic model of rabbit hemorrhagic disease virus by cryo-electron microscopy and crystallography. PLoS Pathog. 2013 Jan; 9(1):e1003132. Wang X, Xu F, Liu J, Gao B, Liu Y, Zhai Y, Ma J, Zhang K, Baker TS, Schulten K, Zheng D, Pang H, Sun F. PMID: 23341770; PMCID: PMC3547835.
      View in: PubMed   Mentions: 67     Fields:    Translation:AnimalsCells
    37. 3D structures of fungal partitiviruses. Adv Virus Res. 2013; 86:59-85. Nibert ML, Tang J, Xie J, Collier AM, Ghabrial SA, Baker TS, Tao YJ. PMID: 23498903; PMCID: PMC5595367.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    38. Viruses of Helminthosporium (Cochlioblus) victoriae. Adv Virus Res. 2013; 86:289-325. Ghabrial SA, Dunn SE, Li H, Xie J, Baker TS. PMID: 23498911.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    39. Mapping a neutralizing epitope onto the capsid of adeno-associated virus serotype 8. J Virol. 2012 Aug; 86(15):7739-51. Gurda BL, Raupp C, Popa-Wagner R, Naumer M, Olson NH, Ng R, McKenna R, Baker TS, Kleinschmidt JA, Agbandje-McKenna M. PMID: 22593150; PMCID: PMC3421660.
      View in: PubMed   Mentions: 73     Fields:    Translation:HumansAnimalsCells
    40. Stepwise molecular display utilizing icosahedral and helical complexes of phage coat and decoration proteins in the development of robust nanoscale display vehicles. Biomaterials. 2012 Aug; 33(22):5628-37. Parent KN, Deedas CT, Egelman EH, Casjens SR, Baker TS, Teschke CM. PMID: 22575828; PMCID: PMC3358469.
      View in: PubMed   Mentions: 22     Fields:    Translation:Cells
    41. Structural insight into the unique properties of adeno-associated virus serotype 9. J Virol. 2012 Jun; 86(12):6947-58. DiMattia MA, Nam HJ, Van Vliet K, Mitchell M, Bennett A, Gurda BL, McKenna R, Olson NH, Sinkovits RS, Potter M, Byrne BJ, Aslanidi G, Zolotukhin S, Muzyczka N, Baker TS, Agbandje-McKenna M. PMID: 22496238; PMCID: PMC3393551.
      View in: PubMed   Mentions: 136     Fields:    Translation:Cells
    42. Metal-directed, chemically tunable assembly of one-, two- and three-dimensional crystalline protein arrays. Nat Chem. 2012 Mar 04; 4(5):375-82. Brodin JD, Ambroggio XI, Tang C, Parent KN, Baker TS, Tezcan FA. PMID: 22522257; PMCID: PMC3335442.
      View in: PubMed   Mentions: 101     Fields:    Translation:Cells
    43. Structural evolution of the P22-like phages: comparison of Sf6 and P22 procapsid and virion architectures. Virology. 2012 Jun 05; 427(2):177-88. Parent KN, Gilcrease EB, Casjens SR, Baker TS. PMID: 22386055; PMCID: PMC3320033.
      View in: PubMed   Mentions: 40     Fields:    Translation:Cells
    44. Molecular links between the E2 envelope glycoprotein and nucleocapsid core in Sindbis virus. J Mol Biol. 2011 Dec 02; 414(3):442-59. Tang J, Jose J, Chipman P, Zhang W, Kuhn RJ, Baker TS. PMID: 22001018; PMCID: PMC3407685.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    45. Electron Cryo-Microscopy Studies of Helminthosporium victoriae Virus 190S. Microsc Microanal. 2011 Jul; 17(Suppl 2):134-135. Dunn SE, Li H, Nibert ML, Ghabrial SA, Baker TS. PMID: 25132801; PMCID: PMC4131742.
      View in: PubMed   Mentions:    Fields:    
    46. Virion structure of baboon reovirus, a fusogenic orthoreovirus that lacks an adhesion fiber. J Virol. 2011 Aug; 85(15):7483-95. Yan X, Parent KN, Goodman RP, Tang J, Shou J, Nibert ML, Duncan R, Baker TS. PMID: 21593159; PMCID: PMC3147939.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    47. Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22. Structure. 2011 Apr 13; 19(4):496-502. Tang J, Lander GC, Olia AS, Olia A, Li R, Casjens S, Prevelige P, Cingolani G, Baker TS, Johnson JE. PMID: 21439834; PMCID: PMC3075339.
      View in: PubMed   Mentions: 74     Fields:    Translation:Cells
    48. Controlling and switching the morphology of micellar nanoparticles with enzymes. J Am Chem Soc. 2011 Jun 08; 133(22):8392-5. Ku TH, Chien MP, Thompson MP, Sinkovits RS, Olson NH, Baker TS, Gianneschi NC. PMID: 21462979; PMCID: PMC3756928.
      View in: PubMed   Mentions: 40     Fields:    Translation:Cells
    49. The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4. Virology. 2011 Mar 01; 411(1):142-52. Shen PS, Enderlein D, Nelson CD, Carter WS, Kawano M, Xing L, Swenson RD, Olson NH, Baker TS, Cheng RH, Atwood WJ, Johne R, Belnap DM. PMID: 21239031; PMCID: PMC3057058.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    50. Cryo-reconstructions of P22 polyheads suggest that phage assembly is nucleated by trimeric interactions among coat proteins. Phys Biol. 2010 Dec 09; 7(4):045004. Parent KN, Sinkovits RS, Suhanovsky MM, Teschke CM, Egelman EH, Baker TS. PMID: 21149969; PMCID: PMC3202341.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    51. Structural characterization of the dual glycan binding adeno-associated virus serotype 6. J Virol. 2010 Dec; 84(24):12945-57. Ng R, Govindasamy L, Gurda BL, McKenna R, Kozyreva OG, Samulski RJ, Parent KN, Baker TS, Agbandje-McKenna M. PMID: 20861247; PMCID: PMC3004313.
      View in: PubMed   Mentions: 106     Fields:    Translation:HumansCells
    52. Determinants of bacteriophage P22 polyhead formation: the role of coat protein flexibility in conformational switching. Mol Microbiol. 2010 Sep; 77(6):1568-82. Suhanovsky MM, Parent KN, Dunn SE, Baker TS, Teschke CM. PMID: 20659287; PMCID: PMC2945288.
      View in: PubMed   Mentions: 23     Fields:    Translation:Cells
    53. Backbone trace of partitivirus capsid protein from electron cryomicroscopy and homology modeling. Biophys J. 2010 Jul 21; 99(2):685-94. Tang J, Pan J, Havens WM, Ochoa WF, Guu TS, Ghabrial SA, Nibert ML, Tao YJ, Baker TS. PMID: 20643089; PMCID: PMC2905076.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    54. Structure of Fusarium poae virus 1 shows conserved and variable elements of partitivirus capsids and evolutionary relationships to picobirnavirus. J Struct Biol. 2010 Dec; 172(3):363-71. Tang J, Ochoa WF, Li H, Havens WM, Nibert ML, Ghabrial SA, Baker TS. PMID: 20599510; PMCID: PMC3664192.
      View in: PubMed   Mentions: 21     Fields:    Translation:Cells
    55. Human bocavirus capsid structure: insights into the structural repertoire of the parvoviridae. J Virol. 2010 Jun; 84(12):5880-9. Gurda BL, Parent KN, Bladek H, Sinkovits RS, DiMattia MA, Rence C, Castro A, McKenna R, Olson N, Brown K, Baker TS, Agbandje-McKenna M. PMID: 20375175; PMCID: PMC2876641.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    56. P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks. Structure. 2010 Mar 10; 18(3):390-401. Parent KN, Khayat R, Tu LH, Suhanovsky MM, Cortines JR, Teschke CM, Johnson JE, Baker TS. PMID: 20223221; PMCID: PMC2951021.
      View in: PubMed   Mentions: 89     Fields:    Translation:Cells
    57. Three-dimensional asymmetric reconstruction of tailed bacteriophage. Methods Enzymol. 2010; 482:185-210. Tang J, Sinkovits RS, Baker TS. PMID: 20888962; PMCID: PMC3779122.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    58. A tale of two symmetrons: rules for construction of icosahedral capsids from trisymmetrons and pentasymmetrons. J Struct Biol. 2010 Apr; 170(1):109-16. Sinkovits RS, Baker TS. PMID: 19963064; PMCID: PMC3834589.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    59. Dynamics and stability in maturation of a T=4 virus. J Mol Biol. 2009 Sep 25; 392(3):803-12. Tang J, Lee KK, Bothner B, Baker TS, Yeager M, Johnson JE. PMID: 19627990; PMCID: PMC2766526.
      View in: PubMed   Mentions: 15     Fields:    Translation:Cells
    60. An icosahedral algal virus has a complex unique vertex decorated by a spike. Proc Natl Acad Sci U S A. 2009 Jul 07; 106(27):11085-9. Cherrier MV, Kostyuchenko VA, Xiao C, Bowman VD, Battisti AJ, Yan X, Chipman PR, Baker TS, Van Etten JL, Rossmann MG. PMID: 19541619; PMCID: PMC2708736.
      View in: PubMed   Mentions: 48     Fields:    Translation:Cells
    61. Atomic structure reveals the unique capsid organization of a dsRNA virus. Proc Natl Acad Sci U S A. 2009 Mar 17; 106(11):4225-30. Pan J, Dong L, Lin L, Ochoa WF, Sinkovits RS, Havens WM, Nibert ML, Baker TS, Ghabrial SA, Tao YJ. PMID: 19246376; PMCID: PMC2657383.
      View in: PubMed   Mentions: 44     Fields:    Translation:Cells
    62. Heparin binding induces conformational changes in Adeno-associated virus serotype 2. J Struct Biol. 2009 Mar; 165(3):146-56. Levy HC, Bowman VD, Govindasamy L, McKenna R, Nash K, Warrington K, Chen W, Muzyczka N, Yan X, Baker TS, Agbandje-McKenna M. PMID: 19121398; PMCID: PMC3694330.
      View in: PubMed   Mentions: 67     Fields:    Translation:Cells
    63. The capsid proteins of a large, icosahedral dsDNA virus. J Mol Biol. 2009 Jan 30; 385(4):1287-99. Yan X, Yu Z, Zhang P, Battisti AJ, Holdaway HA, Chipman PR, Bajaj C, Bergoin M, Rossmann MG, Baker TS. PMID: 19027752; PMCID: PMC2911444.
      View in: PubMed   Mentions: 36     Fields:    Translation:Cells
    64. Infectious myonecrosis virus has a totivirus-like, 120-subunit capsid, but with fiber complexes at the fivefold axes. Proc Natl Acad Sci U S A. 2008 Nov 11; 105(45):17526-31. Tang J, Ochoa WF, Sinkovits RS, Poulos BT, Ghabrial SA, Lightner DV, Baker TS, Nibert ML. PMID: 18981418; PMCID: PMC2582295.
      View in: PubMed   Mentions: 25     Fields:    Translation:AnimalsCells
    65. DNA poised for release in bacteriophage phi29. Structure. 2008 Jun; 16(6):935-43. Tang J, Olson N, Jardine PJ, Grimes S, Anderson DL, Baker TS. PMID: 18547525; PMCID: PMC2556148.
      View in: PubMed   Mentions: 64     Fields:    Translation:Cells
    66. Partitivirus structure reveals a 120-subunit, helix-rich capsid with distinctive surface arches formed by quasisymmetric coat-protein dimers. Structure. 2008 May; 16(5):776-86. Ochoa WF, Havens WM, Sinkovits RS, Nibert ML, Ghabrial SA, Baker TS. PMID: 18462682; PMCID: PMC2556151.
      View in: PubMed   Mentions: 31     Fields:    Translation:AnimalsCells
    67. AUTO3DEM--an automated and high throughput program for image reconstruction of icosahedral particles. J Struct Biol. 2007 Jan; 157(1):73-82. Yan X, Sinkovits RS, Baker TS. PMID: 17029842; PMCID: PMC1847775.
      View in: PubMed   Mentions: 145     Fields:    Translation:Cells
    68. Removal of divalent cations induces structural transitions in red clover necrotic mosaic virus, revealing a potential mechanism for RNA release. J Virol. 2006 Nov; 80(21):10395-406. Sherman MB, Guenther RH, Tama F, Sit TL, Brooks CL, Mikhailov AM, Orlova EV, Baker TS, Lommel SA. PMID: 16920821; PMCID: PMC1641784.
      View in: PubMed   Mentions: 44     Fields:    Translation:Cells
    69. Ab initio random model method facilitates 3D reconstruction of icosahedral particles. J Struct Biol. 2007 Jan; 157(1):211-25. Yan X, Dryden KA, Tang J, Baker TS. PMID: 16979906; PMCID: PMC1919437.
      View in: PubMed   Mentions: 79     Fields:    Translation:AnimalsCells
    70. Mapping the structure and function of the E1 and E2 glycoproteins in alphaviruses. Structure. 2006 Jan; 14(1):63-73. Mukhopadhyay S, Zhang W, Gabler S, Chipman PR, Strauss EG, Strauss JH, Baker TS, Kuhn RJ, Rossmann MG. PMID: 16407066; PMCID: PMC2757649.
      View in: PubMed   Mentions: 106     Fields:    Translation:Cells
    71. A model-based parallel origin and orientation refinement algorithm for cryoTEM and its application to the study of virus structures. J Struct Biol. 2006 Apr; 154(1):1-19. Ji Y, Marinescu DC, Zhang W, Zhang X, Yan X, Baker TS. PMID: 16459100; PMCID: PMC4147871.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    72. Features of reovirus outer capsid protein mu1 revealed by electron cryomicroscopy and image reconstruction of the virion at 7.0 Angstrom resolution. Structure. 2005 Oct; 13(10):1545-57. Zhang X, Ji Y, Zhang L, Harrison SC, Marinescu DC, Nibert ML, Baker TS. PMID: 16216585; PMCID: PMC4126556.
      View in: PubMed   Mentions: 52     Fields:    Translation:AnimalsCells
    73. Structure of avian orthoreovirus virion by electron cryomicroscopy and image reconstruction. Virology. 2005 Dec 05; 343(1):25-35. Zhang X, Tang J, Walker SB, O'Hara D, Nibert ML, Duncan R, Baker TS. PMID: 16153672; PMCID: PMC4152769.
      View in: PubMed   Mentions: 38     Fields:    Translation:Cells
    74. The marine algal virus PpV01 has an icosahedral capsid with T=219 quasisymmetry. J Virol. 2005 Jul; 79(14):9236-43. Yan X, Chipman PR, Castberg T, Bratbak G, Baker TS. PMID: 15994818; PMCID: PMC1168743.
      View in: PubMed   Mentions: 33     Fields:    Translation:Cells
    75. Structure of adeno-associated virus type 4. J Virol. 2005 Apr; 79(8):5047-58. Padron E, Bowman V, Kaludov N, Govindasamy L, Levy H, Nick P, McKenna R, Muzyczka N, Chiorini JA, Baker TS, Agbandje-McKenna M. PMID: 15795290; PMCID: PMC1069529.
      View in: PubMed   Mentions: 60     Fields:    Translation:AnimalsCells
    76. Heparin binding sites on Ross River virus revealed by electron cryo-microscopy. Virology. 2005 Feb 20; 332(2):511-8. Zhang W, Heil M, Kuhn RJ, Baker TS. PMID: 15680416; PMCID: PMC4152768.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
    77. Conformational changes of the flavivirus E glycoprotein. Structure. 2004 Sep; 12(9):1607-18. Zhang Y, Zhang W, Ogata S, Clements D, Strauss JH, Baker TS, Kuhn RJ, Rossmann MG. PMID: 15341726; PMCID: PMC4152830.
      View in: PubMed   Mentions: 237     Fields:    Translation:HumansCells
    78. Putative autocleavage of outer capsid protein micro1, allowing release of myristoylated peptide micro1N during particle uncoating, is critical for cell entry by reovirus. J Virol. 2004 Aug; 78(16):8732-45. Odegard AL, Chandran K, Zhang X, Parker JS, Baker TS, Nibert ML. PMID: 15280481; PMCID: PMC479062.
      View in: PubMed   Mentions: 75     Fields:    Translation:AnimalsCells
    79. A Structural-informatics approach for tracing beta-sheets: building pseudo-C(alpha) traces for beta-strands in intermediate-resolution density maps. J Mol Biol. 2004 May 21; 339(1):117-30. Kong Y, Zhang X, Baker TS, Ma J. PMID: 15123425; PMCID: PMC4148645.
      View in: PubMed   Mentions: 38     Fields:    Translation:Cells
    80. Structure of adeno-associated virus serotype 5. J Virol. 2004 Apr; 78(7):3361-71. Walters RW, Agbandje-McKenna M, Bowman VD, Moninger TO, Olson NH, Seiler M, Chiorini JA, Baker TS, Zabner J. PMID: 15016858; PMCID: PMC371067.
      View in: PubMed   Mentions: 55     Fields:    Translation:Cells
    81. Image segmentation for automatic particle identification in electron micrographs based on hidden Markov random field models and expectation maximization. J Struct Biol. 2004 Jan-Feb; 145(1-2):123-41. Singh V, Marinescu DC, Baker TS. PMID: 15065680; PMCID: PMC4167639.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    82. Reovirus polymerase lambda 3 localized by cryo-electron microscopy of virions at a resolution of 7.6 A. Nat Struct Biol. 2003 Dec; 10(12):1011-8. Zhang X, Walker SB, Chipman PR, Nibert ML, Baker TS. PMID: 14608373; PMCID: PMC4152824.
      View in: PubMed   Mentions: 104     Fields:    Translation:Cells
    83. Visualization of membrane protein domains by cryo-electron microscopy of dengue virus. Nat Struct Biol. 2003 Nov; 10(11):907-12. Zhang W, Chipman PR, Corver J, Johnson PR, Zhang Y, Mukhopadhyay S, Baker TS, Strauss JH, Rossmann MG, Kuhn RJ. PMID: 14528291; PMCID: PMC4148076.
      View in: PubMed   Mentions: 206     Fields:    Translation:Cells
    84. Structures of immature flavivirus particles. EMBO J. 2003 Jun 02; 22(11):2604-13. Zhang Y, Corver J, Chipman PR, Zhang W, Pletnev SV, Sedlak D, Baker TS, Strauss JH, Kuhn RJ, Rossmann MG. PMID: 12773377; PMCID: PMC156766.
      View in: PubMed   Mentions: 224     Fields:    Translation:AnimalsCells
    85. CPV, a stable and symmetrical machine for mRNA synthesis. Structure. 2003 Jun; 11(6):605-7. Nibert ML, Baker TS. PMID: 12791245.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    86. Orientation Refinement of Virus Structures with Unknown Symmetry. Proc IPDPS (Conf). 2003 Apr 22; 2003:1530-2075. Ji Y, Marinescu DC, Zhang W, Baker TS. PMID: 25580470; PMCID: PMC4288035.
      View in: PubMed   Mentions: 4  
    87. Effects of the cowpea chlorotic mottle bromovirus beta-hexamer structure on virion assembly. Virology. 2003 Feb 15; 306(2):280-8. Willits D, Zhao X, Olson N, Baker TS, Zlotnick A, Johnson JE, Douglas T, Young MJ. PMID: 12642101; PMCID: PMC4191912.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    88. Structural studies of bacteriophage alpha3 assembly. J Mol Biol. 2003 Jan 03; 325(1):11-24. Bernal RA, Hafenstein S, Olson NH, Bowman VD, Chipman PR, Baker TS, Fane BA, Rossmann MG. PMID: 12473449; PMCID: PMC4130226.
      View in: PubMed   Mentions: 24     Fields:    Translation:Cells
    89. An antibody to the putative aphid recognition site on cucumber mosaic virus recognizes pentons but not hexons. J Virol. 2002 Dec; 76(23):12250-8. Bowman VD, Chase ES, Franz AW, Chipman PR, Zhang X, Perry KL, Baker TS, Smith TJ. PMID: 12414964; PMCID: PMC136911.
      View in: PubMed   Mentions: 39     Fields:    Translation:AnimalsCellsPHPublic Health
    90. The hydrophilic amino-terminal arm of reovirus core shell protein lambda1 is dispensable for particle assembly. J Virol. 2002 Dec; 76(23):12211-22. Kim J, Zhang X, Centonze VE, Bowman VD, Noble S, Baker TS, Nibert ML. PMID: 12414960; PMCID: PMC136864.
      View in: PubMed   Mentions: 13     Fields:    Translation:Cells
    91. Placement of the structural proteins in Sindbis virus. J Virol. 2002 Nov; 76(22):11645-58. Zhang W, Mukhopadhyay S, Pletnev SV, Baker TS, Kuhn RJ, Rossmann MG. PMID: 12388725; PMCID: PMC136788.
      View in: PubMed   Mentions: 122     Fields:    Translation:Cells
    92. The structure and evolution of the major capsid protein of a large, lipid-containing DNA virus. Proc Natl Acad Sci U S A. 2002 Nov 12; 99(23):14758-63. Nandhagopal N, Simpson AA, Gurnon JR, Yan X, Baker TS, Graves MV, Van Etten JL, Rossmann MG. PMID: 12411581; PMCID: PMC137492.
      View in: PubMed   Mentions: 121     Fields:    Translation:Cells
    93. Note to the Paper by Guasch et al. (2002) Detailed Architecture of a DNA Translocating Machine: The High-resolution Structure of the Bacteriophage ϕ29 Connector Particle. J Mol Biol. 2002 Aug 09; 321(2):379-380. Guasch A, Pous J, Ibarra B, Gomis-Rüth FX, Valpuesta JM, Sousa N, Carrascosa JL, Coll M, Simpson AA, Tao Y, Leiman PG, Badasso MO, He Y, Jardine PJ, Olson NH, Morais MC, Grimes S, Anderson DL, Baker TS, Rossmann MG. PMID: 25308998; PMCID: PMC4191910.
      View in: PubMed   Mentions:    Fields:    
    94. Structure of decay-accelerating factor bound to echovirus 7: a virus-receptor complex. Proc Natl Acad Sci U S A. 2002 Aug 06; 99(16):10325-9. He Y, Lin F, Chipman PR, Bator CM, Baker TS, Shoham M, Kuhn RJ, Medof ME, Rossmann MG. PMID: 12119400; PMCID: PMC124913.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansCells
    95. Aura virus structure suggests that the T=4 organization is a fundamental property of viral structural proteins. J Virol. 2002 Jul; 76(14):7239-46. Zhang W, Fisher BR, Olson NH, Strauss JH, Kuhn RJ, Baker TS. PMID: 12072523; PMCID: PMC136343.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    96. Loss of activities for mRNA synthesis accompanies loss of lambda2 spikes from reovirus cores: an effect of lambda2 on lambda1 shell structure. Virology. 2002 Apr 25; 296(1):24-38. Luongo CL, Zhang X, Walker SB, Chen Y, Broering TJ, Farsetta DL, Bowman VD, Baker TS, Nibert ML. PMID: 12036315.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    97. Structure of dengue virus: implications for flavivirus organization, maturation, and fusion. Cell. 2002 Mar 08; 108(5):717-25. Kuhn RJ, Zhang W, Rossmann MG, Pletnev SV, Corver J, Lenches E, Jones CT, Mukhopadhyay S, Chipman PR, Strauss EG, Baker TS, Strauss JH. PMID: 11893341; PMCID: PMC4152842.
      View in: PubMed   Mentions: 718     Fields:    Translation:HumansCells
    98. Structure of the reovirus membrane-penetration protein, Mu1, in a complex with is protector protein, Sigma3. Cell. 2002 Jan 25; 108(2):283-95. Liemann S, Chandran K, Baker TS, Nibert ML, Harrison SC. PMID: 11832217; PMCID: PMC4152834.
      View in: PubMed   Mentions: 123     Fields:    Translation:HumansAnimalsCells
    99. Interaction of coxsackievirus B3 with the full length coxsackievirus-adenovirus receptor. Nat Struct Biol. 2001 Oct; 8(10):874-8. He Y, Chipman PR, Howitt J, Bator CM, Whitt MA, Baker TS, Kuhn RJ, Anderson CW, Freimuth P, Rossmann MG. PMID: 11573093; PMCID: PMC4152846.
      View in: PubMed   Mentions: 110     Fields:    Translation:HumansCells
    100. Cryoelectron-microscopy image reconstruction of symmetry mismatches in bacteriophage phi29. J Struct Biol. 2001 Jul; 135(1):38-46. Morais MC, Tao Y, Olson NH, Grimes S, Jardine PJ, Anderson DL, Baker TS, Rossmann MG. PMID: 11562164; PMCID: PMC5595366.
      View in: PubMed   Mentions: 53     Fields:    Translation:Cells
    101. Complete in vitro assembly of the reovirus outer capsid produces highly infectious particles suitable for genetic studies of the receptor-binding protein. J Virol. 2001 Jun; 75(11):5335-42. Chandran K, Zhang X, Olson NH, Walker SB, Chappell JD, Dermody TS, Baker TS, Nibert ML. PMID: 11333914; PMCID: PMC114938.
      View in: PubMed   Mentions: 29     Fields:    Translation:Cells
    102. Locations of carbohydrate sites on alphavirus glycoproteins show that E1 forms an icosahedral scaffold. Cell. 2001 Apr 06; 105(1):127-136. Pletnev SV, Zhang W, Mukhopadhyay S, Fisher BR, Hernandez R, Brown DT, Baker TS, Rossmann MG, Kuhn RJ. PMID: 11301008; PMCID: PMC4140091.
      View in: PubMed   Mentions: 96     Fields:    Translation:AnimalsCells
    103. Interaction of coxsackievirus A21 with its cellular receptor, ICAM-1. J Virol. 2001 Mar; 75(5):2444-51. Xiao C, Bator CM, Bowman VD, Rieder E, He Y, Hébert B, Bella J, Baker TS, Wimmer E, Kuhn RJ, Rossmann MG. PMID: 11160747; PMCID: PMC114827.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    104. Structure of the Maize streak virus geminate particle. Virology. 2001 Jan 20; 279(2):471-7. Zhang W, Olson NH, Baker TS, Faulkner L, Agbandje-McKenna M, Boulton MI, Davies JW, McKenna R. PMID: 11162803.
      View in: PubMed   Mentions: 61     Fields:    Translation:AnimalsCells
    105. The structure of isometric capsids of bacteriophage T4. Virology. 2001 Jan 20; 279(2):385-91. Olson NH, Gingery M, Eiserling FA, Baker TS. PMID: 11162794.
      View in: PubMed   Mentions: 27     Fields:    Translation:Cells
    106. Will the polio niche remain vacant? Dev Biol (Basel). 2001; 105:111-22; discussion 149-50. Rieder E, Gorbalenya AE, Xiao C, He Y, Baker TS, Kuhn RJ, Rossmann MG, Wimmer E. PMID: 11763320.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    107. Structure of the bacteriophage phi29 DNA packaging motor. Nature. 2000 Dec 07; 408(6813):745-50. Simpson AA, Tao Y, Leiman PG, Badasso MO, He Y, Jardine PJ, Olson NH, Morais MC, Grimes S, Anderson DL, Baker TS, Rossmann MG. PMID: 11130079; PMCID: PMC4151180.
      View in: PubMed   Mentions: 241     Fields:    Translation:Cells
    108. Cell recognition and entry by rhino- and enteroviruses. Virology. 2000 Apr 10; 269(2):239-47. Rossmann MG, Bella J, Kolatkar PR, He Y, Wimmer E, Kuhn RJ, Baker TS. PMID: 10753702.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    109. Structure and assembly of large lipid-containing dsDNA viruses. Nat Struct Biol. 2000 Feb; 7(2):101-3. Yan X, Olson NH, Van Etten JL, Bergoin M, Rossmann MG, Baker TS. PMID: 10655609; PMCID: PMC4167659.
      View in: PubMed   Mentions: 64     Fields:    Translation:Cells
    110. Interaction of the poliovirus receptor with poliovirus. Proc Natl Acad Sci U S A. 2000 Jan 04; 97(1):79-84. He Y, Bowman VD, Mueller S, Bator CM, Bella J, Peng X, Baker TS, Wimmer E, Kuhn RJ, Rossmann MG. PMID: 10618374; PMCID: PMC26619.
      View in: PubMed   Mentions: 106     Fields:    Translation:HumansCells
    111. Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs. Microbiol Mol Biol Rev. 1999 Dec; 63(4):862-922, table of contents. Baker TS, Olson NH, Fuller SD. PMID: 10585969; PMCID: PMC98980.
      View in: PubMed   Mentions: 197     Fields:    Translation:Cells
    112. RNA-controlled polymorphism in the in vivo assembly of 180-subunit and 120-subunit virions from a single capsid protein. Proc Natl Acad Sci U S A. 1999 Nov 23; 96(24):13650-5. Krol MA, Olson NH, Tate J, Johnson JE, Baker TS, Ahlquist P. PMID: 10570127; PMCID: PMC24119.
      View in: PubMed   Mentions: 66     Fields:    Translation:AnimalsCells
    113. Structural studies of two rhinovirus serotypes complexed with fragments of their cellular receptor. EMBO J. 1999 Nov 15; 18(22):6249-59. Kolatkar PR, Bella J, Olson NH, Bator CM, Baker TS, Rossmann MG. PMID: 10562537; PMCID: PMC1171688.
      View in: PubMed   Mentions: 96     Fields:    Translation:HumansCells
    114. Three-dimensional structure of Aleutian mink disease parvovirus: implications for disease pathogenicity. J Virol. 1999 Aug; 73(8):6882-91. McKenna R, Olson NH, Chipman PR, Baker TS, Booth TF, Christensen J, Aasted B, Fox JM, Bloom ME, Wolfinbarger JB, Agbandje-McKenna M. PMID: 10400786; PMCID: PMC112773.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansAnimalsCells
    115. In vitro recoating of reovirus cores with baculovirus-expressed outer-capsid proteins mu1 and sigma3. J Virol. 1999 May; 73(5):3941-50. Chandran K, Walker SB, Chen Y, Contreras CM, Schiff LA, Baker TS, Nibert ML. PMID: 10196289; PMCID: PMC104172.
      View in: PubMed   Mentions: 70     Fields:    Translation:AnimalsCells
    116. Low-resolution density maps from atomic models: how stepping "back" can be a step "forward". J Struct Biol. 1999 Apr-May; 125(2-3):166-75. Belnap DM, Kumar A, Folk JT, Smith TJ, Baker TS. PMID: 10222272.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    117. Reovirus virion-like particles obtained by recoating infectious subvirion particles with baculovirus-expressed sigma3 protein: an approach for analyzing sigma3 functions during virus entry. J Virol. 1999 Apr; 73(4):2963-73. Jané-Valbuena J, Nibert ML, Spencer SM, Walker SB, Baker TS, Chen Y, Centonze VE, Schiff LA. PMID: 10074146; PMCID: PMC104056.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    118. The Electron Microscopy Outreach Program: A Web-based resource for research and education. J Struct Biol. 1999 Apr-May; 125(2-3):246-52. Sosinsky GE, Baker TS, Hand G, Ellisman MH. PMID: 10222281.
      View in: PubMed   Mentions:    Fields:    
    119. The structure of an insect parvovirus (Galleria mellonella densovirus) at 3.7 A resolution. Structure. 1998 Nov 15; 6(11):1355-67. Simpson AA, Chipman PR, Baker TS, Tijssen P, Rossmann MG. PMID: 9817847; PMCID: PMC4167665.
      View in: PubMed   Mentions: 54     Fields:    Translation:AnimalsCells
    120. Assembly of a tailed bacterial virus and its genome release studied in three dimensions. Cell. 1998 Oct 30; 95(3):431-7. Tao Y, Olson NH, Xu W, Anderson DL, Rossmann MG, Baker TS. PMID: 9814712; PMCID: PMC4167676.
      View in: PubMed   Mentions: 90     Fields:    Translation:Cells
    121. Antibody-mediated neutralization of human rhinovirus 14 explored by means of cryoelectron microscopy and X-ray crystallography of virus-Fab complexes. J Virol. 1998 Jun; 72(6):4610-22. Che Z, Olson NH, Leippe D, Lee WM, Mosser AG, Rueckert RR, Baker TS, Smith TJ. PMID: 9573224; PMCID: PMC109976.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    122. Internal/structures containing transcriptase-related proteins in top component particles of mammalian orthoreovirus. Virology. 1998 May 25; 245(1):33-46. Dryden KA, Farsetta DL, Wang G, Keegan JM, Fields BN, Baker TS, Nibert ML. PMID: 9614865.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    123. Comparison of the native CCMV virion with in vitro assembled CCMV virions by cryoelectron microscopy and image reconstruction. Virology. 1998 Apr 25; 244(1):212-8. Fox JM, Wang G, Speir JA, Olson NH, Johnson JE, Baker TS, Young MJ. PMID: 9581792.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    124. Structural analysis of the Spiroplasma virus, SpV4: implications for evolutionary variation to obtain host diversity among the Microviridae. Structure. 1998 Feb 15; 6(2):135-45. Chipman PR, Agbandje-McKenna M, Renaudin J, Baker TS, McKenna R. PMID: 9519405; PMCID: PMC4167680.
      View in: PubMed   Mentions: 36     Fields:    Translation:Cells
    125. Identification of spherical virus particles in digitized images of entire electron micrographs. J Struct Biol. 1997 Nov; 120(2):146-57. Boier Martin IM, Marinescu DC, Lynch RE, Baker TS. PMID: 9417979.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    126. The structure of alfalfa mosaic virus capsid protein assembled as a T=1 icosahedral particle at 4.0-A resolution. J Virol. 1997 Oct; 71(10):7911-6. Kumar A, Reddy VS, Yusibov V, Chipman PR, Hata Y, Fita I, Fukuyama K, Rossmann MG, Loesch-Fries LS, Baker TS, Johnson JE. PMID: 9311881; PMCID: PMC192148.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    127. IRIS explorer software for radial-depth cueing reovirus particles and other macromolecular structures determined by cryoelectron microscopy and image reconstruction. J Struct Biol. 1997 Oct; 120(1):11-21. Spencer SM, Sgro JY, Dryden KA, Baker TS, Nibert ML. PMID: 9361260.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    128. Localization of a C-terminal region of lambda2 protein in reovirus cores. J Virol. 1997 Oct; 71(10):8035-40. Luongo CL, Dryden KA, Farsetta DL, Margraf RL, Severson TF, Olson NH, Fields BN, Baker TS, Nibert ML. PMID: 9311901; PMCID: PMC192168.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    129. A method for establishing the handedness of biological macromolecules. J Struct Biol. 1997 Oct; 120(1):44-51. Belnap DM, Olson NH, Baker TS. PMID: 9356290.
      View in: PubMed   Mentions: 21     Fields:    Translation:Cells
    130. The structure of cucumber mosaic virus: cryoelectron microscopy, X-ray crystallography, and sequence analysis. Virology. 1997 May 26; 232(1):91-7. Wikoff WR, Tsai CJ, Wang G, Baker TS, Johnson JE. PMID: 9185592.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    131. Low resolution meets high: towards a resolution continuum from cells to atoms. Curr Opin Struct Biol. 1996 Oct; 6(5):585-94. Baker TS, Johnson JE. PMID: 8913679.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimalsCells
    132. Neutralizing antibody to human rhinovirus 14 penetrates the receptor-binding canyon. Nature. 1996 Sep 26; 383(6598):350-4. Smith TJ, Chase ES, Schmidt TJ, Olson NH, Baker TS. PMID: 8848050; PMCID: PMC4167671.
      View in: PubMed   Mentions: 72     Fields:    Translation:HumansCells
    133. Cryo-electron microscopy studies of empty capsids of human parvovirus B19 complexed with its cellular receptor. Proc Natl Acad Sci U S A. 1996 Jul 23; 93(15):7502-6. Chipman PR, Agbandje-McKenna M, Kajigaya S, Brown KE, Young NS, Baker TS, Rossmann MG. PMID: 8755503; PMCID: PMC38774.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansCells
    134. Conserved features in papillomavirus and polyomavirus capsids. J Mol Biol. 1996 Jun 07; 259(2):249-63. Belnap DM, Olson NH, Cladel NM, Newcomb WW, Brown JC, Kreider JW, Christensen ND, Baker TS. PMID: 8656427; PMCID: PMC4142696.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansAnimalsCells
    135. Three-dimensional reconstruction of icosahedral particles--the uncommon line. J Struct Biol. 1996 Jan-Feb; 116(1):48-55. Fuller SD, Butcher SJ, Cheng RH, Baker TS. PMID: 8742722.
      View in: PubMed   Mentions: 96     Fields:    Translation:Cells
    136. A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy. J Struct Biol. 1996 Jan-Feb; 116(1):120-30. Baker TS, Cheng RH. PMID: 8742733.
      View in: PubMed   Mentions: 160     Fields:    Translation:Cells
    137. Putative receptor binding sites on alphaviruses as visualized by cryoelectron microscopy. Proc Natl Acad Sci U S A. 1995 Nov 07; 92(23):10648-52. Smith TJ, Cheng RH, Olson NH, Peterson P, Chase E, Kuhn RJ, Baker TS. PMID: 7479858; PMCID: PMC40669.
      View in: PubMed   Mentions: 78     Fields:    Translation:Cells
    138. DNA packaging intermediates of bacteriophage φX174 Structure. 1995 04 15; 3(4):353-363. Ilag LL, Olson NH, Dokland T, Music CL, Cheng RH, Bowen Z, McKenna R, Rossmann MG, Baker TS, Incardona NL. PMID: 7613866; PMCID: PMC4142697.
      View in: PubMed   Mentions: 21     Fields:    Translation:Cells
    139. In vitro assembly of cowpea chlorotic mottle virus from coat protein expressed in Escherichia coli and in vitro-transcribed viral cDNA. Virology. 1995 Mar 10; 207(2):486-94. Zhao X, Fox JM, Olson NH, Baker TS, Young MJ. PMID: 7886952.
      View in: PubMed   Mentions: 52     Fields:    Translation:AnimalsCells
    140. Nucleocapsid and glycoprotein organization in an enveloped virus. Cell. 1995 Feb 24; 80(4):621-30. Cheng RH, Kuhn RJ, Olson NH, Rossmann MG, Choi HK, Smith TJ, Baker TS. PMID: 7867069; PMCID: PMC4167723.
      View in: PubMed   Mentions: 166     Fields:    Translation:Cells
    141. Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy. Structure. 1995 Jan 15; 3(1):63-78. Speir JA, Munshi S, Wang G, Baker TS, Johnson JE. PMID: 7743132; PMCID: PMC4191737.
      View in: PubMed   Mentions: 193     Fields:    Translation:Cells
    142. Fungal virus capsids, cytoplasmic compartments for the replication of double-stranded RNA, formed as icosahedral shells of asymmetric Gag dimers. J Mol Biol. 1994 Dec 02; 244(3):255-8. Cheng RH, Caston JR, Wang GJ, Gu F, Smith TJ, Baker TS, Bozarth RF, Trus BL, Cheng N, Wickner RB, et al. PMID: 7966336.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    143. Direct imaging of interactions between an icosahedral virus and conjugate F(ab) fragments by cryoelectron microscopy and X-ray crystallography. Virology. 1994 Nov 01; 204(2):777-88. Porta C, Wang G, Cheng H, Chen Z, Baker TS, Johnson JE. PMID: 7941346.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    144. The structure of a neutralized virus: canine parvovirus complexed with neutralizing antibody fragment. Structure. 1994 Jul 15; 2(7):595-607. Wikoff WR, Wang G, Parrish CR, Cheng RH, Strassheim ML, Baker TS, Rossmann MG. PMID: 7522904; PMCID: PMC4167666.
      View in: PubMed   Mentions: 36     Fields:    Translation:Cells
    145. Structure determination of an Fab fragment that neutralizes human rhinovirus 14 and analysis of the Fab-virus complex. J Mol Biol. 1994 Jul 08; 240(2):127-37. Liu H, Smith TJ, Lee WM, Mosser AG, Rueckert RR, Olson NH, Cheng RH, Baker TS. PMID: 8027997.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    146. Three-dimensional structure of vaccinia virus-produced human papillomavirus type 1 capsids. J Virol. 1994 Jul; 68(7):4503-5. Hagensee ME, Olson NH, Baker TS, Galloway DA. PMID: 8207824; PMCID: PMC236376.
      View in: PubMed   Mentions: 41     Fields:    Translation:Cells
    147. Functional implications of quasi-equivalence in a T = 3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography. Structure. 1994 Apr 15; 2(4):271-82. Cheng RH, Reddy VS, Olson NH, Fisher AJ, Baker TS, Johnson JE. PMID: 8087554; PMCID: PMC4140080.
      View in: PubMed   Mentions: 53     Fields:    Translation:Cells
    148. Characterization of the chloroplast cytochrome b6f complex as a structural and functional dimer. Biochemistry. 1994 Apr 12; 33(14):4401-9. Huang D, Everly RM, Cheng RH, Heymann JB, Schägger H, Sled V, Ohnishi T, Baker TS, Cramer WA. PMID: 8155658; PMCID: PMC4167635.
      View in: PubMed   Mentions: 32     Fields:    Translation:Cells
    149. Three-dimensional structure of the rotavirus haemagglutinin VP4 by cryo-electron microscopy and difference map analysis. EMBO J. 1994 Mar 01; 13(5):1011-8. Yeager M, Berriman JA, Baker TS, Bellamy AR. PMID: 8131735; PMCID: PMC394908.
      View in: PubMed   Mentions: 52     Fields:    Translation:AnimalsCells
    150. Structural aspects of the cytochrome b6f complex; structure of the lumen-side domain of cytochrome f. J Bioenerg Biomembr. 1994 Feb; 26(1):31-47. Cramer WA, Martinez SE, Huang D, Tae GS, Everly RM, Heymann JB, Cheng RH, Baker TS, Smith JL. PMID: 8027021; PMCID: PMC4167668.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    151. Comparative studies of T = 3 and T = 4 icosahedral RNA insect viruses. Arch Virol Suppl. 1994; 9:497-512. Johnson JE, Munshi S, Liljas L, Agrawal D, Olson NH, Reddy V, Fisher A, McKinney B, Schmidt T, Baker TS. PMID: 8032278; PMCID: PMC4167711.
      View in: PubMed   Mentions: 7     Fields:    Translation:Cells
    152. Crystallographic and cryo EM analysis of virion-receptor interactions. Arch Virol Suppl. 1994; 9:531-41. Rossmann MG, Olson NH, Kolatkar PR, Oliveira MA, Cheng RH, Greve JM, McClelland A, Baker TS. PMID: 7913361; PMCID: PMC4140090.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    153. Early steps in reovirus infection are associated with dramatic changes in supramolecular structure and protein conformation: analysis of virions and subviral particles by cryoelectron microscopy and image reconstruction. J Cell Biol. 1993 Sep; 122(5):1023-41. Dryden KA, Wang G, Yeager M, Nibert ML, Coombs KM, Furlong DB, Fields BN, Baker TS. PMID: 8394844; PMCID: PMC2119633.
      View in: PubMed   Mentions: 185     Fields:    Translation:AnimalsCells
    154. Structure of a human rhinovirus-bivalently bound antibody complex: implications for viral neutralization and antibody flexibility. Proc Natl Acad Sci U S A. 1993 Aug 01; 90(15):7015-8. Smith TJ, Olson NH, Cheng RH, Chase ES, Baker TS. PMID: 8394005; PMCID: PMC47066.
      View in: PubMed   Mentions: 54     Fields:    Translation:Cells
    155. Use of radial density plots to calibrate image magnification for frozen-hydrated specimens. Ultramicroscopy. 1993 Mar; 48(3):347-58. Belnap DM, Grochulski WD, Olson NH, Baker TS. PMID: 8475599; PMCID: PMC4167663.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    156. Structure of human rhinovirus complexed with Fab fragments from a neutralizing antibody. J Virol. 1993 Mar; 67(3):1148-58. Smith TJ, Olson NH, Cheng RH, Liu H, Chase ES, Lee WM, Leippe DM, Mosser AG, Rueckert RR, Baker TS. PMID: 7679742; PMCID: PMC237479.
      View in: PubMed   Mentions: 50     Fields:    Translation:Cells
    157. Preliminary X-ray data analysis of crystalline cowpea chlorotic mottle virus. Virology. 1993 Mar; 193(1):234-41. Speir JA, Munshi S, Baker TS, Johnson JE. PMID: 8438568.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    158. Structure of a human rhinovirus complexed with its receptor molecule. Proc Natl Acad Sci U S A. 1993 Jan 15; 90(2):507-11. Olson NH, Kolatkar PR, Oliveira MA, Cheng RH, Greve JM, McClelland A, Baker TS, Rossmann MG. PMID: 8093643; PMCID: PMC45692.
      View in: PubMed   Mentions: 128     Fields:    Translation:HumansCells
    159. Structure of a human Rhinovirus complexed with its receptor molecule. Protein Eng. 1993 Jan; 6(Suppl):1. Olson NH, Kolatkar PR, Oliveira MA, Cheng RH, Greve JM, McClelland A, Baker TS, Rossmann MG. PMID: 38626270; PMCID: PMC7529083.
      View in: PubMed   Mentions:    Fields:    
    160. Three-dimensional structure of the truncated core of the Saccharomyces cerevisiae pyruvate dehydrogenase complex determined from negative stain and cryoelectron microscopy images. J Biol Chem. 1992 Dec 05; 267(34):24769-75. Stoops JK, Baker TS, Schroeter JP, Kolodziej SJ, Niu XD, Reed LJ. PMID: 1280269; PMCID: PMC4167662.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    161. The three-dimensional structure of frozen-hydrated bacteriophage phi X174. J Struct Biol. 1992 Mar-Apr; 108(2):168-75. Olson NH, Baker TS, Willingmann P, Incardona NL. PMID: 1486007; PMCID: PMC4140079.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    162. Cauliflower mosaic virus: a 420 subunit (T = 7), multilayer structure. Virology. 1992 Feb; 186(2):655-68. Cheng RH, Olson NH, Baker TS. PMID: 1733107; PMCID: PMC4167691.
      View in: PubMed   Mentions: 32     Fields:    Translation:Cells
    163. Identification of a Fab interaction footprint site on an icosahedral virus by cryoelectron microscopy and X-ray crystallography. Nature. 1992 Jan 16; 355(6357):275-8. Wang GJ, Porta C, Chen ZG, Baker TS, Johnson JE. PMID: 1731227; PMCID: PMC4152847.
      View in: PubMed   Mentions: 28     Fields:    Translation:Cells
    164. Atomic structure of single-stranded DNA bacteriophage phi X174 and its functional implications. Nature. 1992 Jan 09; 355(6356):137-43. McKenna R, Xia D, Willingmann P, Ilag LL, Krishnaswamy S, Rossmann MG, Olson NH, Baker TS, Incardona NL. PMID: 1370343; PMCID: PMC4167681.
      View in: PubMed   Mentions: 94     Fields:    Translation:Cells
    165. Structures of bovine and human papillomaviruses. Analysis by cryoelectron microscopy and three-dimensional image reconstruction. Biophys J. 1991 Dec; 60(6):1445-56. Baker TS, Newcomb WW, Olson NH, Cowsert LM, Olson C, Brown JC. PMID: 1663794; PMCID: PMC1260204.
      View in: PubMed   Mentions: 153     Fields:    Translation:HumansAnimalsCells
    166. Regulation of the phage phi 29 prohead shape and size by the portal vertex. Virology. 1991 Jul; 183(1):366-73. Guo PX, Erickson S, Xu W, Olson N, Baker TS, Anderson D. PMID: 1905079; PMCID: PMC4167689.
      View in: PubMed   Mentions: 50     Fields:    Translation:Cells
    167. Structural studies of human alpha 2-macroglobulin: concordance between projected views obtained by negative-stain and cryoelectron microscopy. J Struct Biol. 1991 Apr; 106(2):172-8. Stoops JK, Schroeter JP, Bretaudiere JP, Olson NH, Baker TS, Strickland DK. PMID: 1725125; PMCID: PMC4167667.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    168. Liquid-crystalline, phage-like packing of encapsidated DNA in herpes simplex virus. Cell. 1991 Mar 08; 64(5):1007-15. Booy FP, Newcomb WW, Trus BL, Brown JC, Baker TS, Steven AC. PMID: 1848156; PMCID: PMC4140082.
      View in: PubMed   Mentions: 117     Fields:    Translation:AnimalsCells
    169. Correlation analysis of gap junction lattice images. Biophys J. 1990 Nov; 58(5):1213-26. Sosinsky GE, Baker TS, Caspar DL, Goodenough DA. PMID: 2291941; PMCID: PMC1281066.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    170. The three-dimensional structure of frozen-hydrated Nudaurelia capensis beta virus, a T = 4 insect virus. J Struct Biol. 1990 Oct-Dec; 105(1-3):111-22. Olson NH, Baker TS, Johnson JE, Hendry DA. PMID: 1712620; PMCID: PMC4167673.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    171. Three-dimensional structure of rhesus rotavirus by cryoelectron microscopy and image reconstruction. J Cell Biol. 1990 Jun; 110(6):2133-44. Yeager M, Dryden KA, Olson NH, Greenberg HB, Baker TS. PMID: 2161857; PMCID: PMC2116141.
      View in: PubMed   Mentions: 79     Fields:    Translation:AnimalsCells
    172. Three-dimensional structures of maturable and abortive capsids of equine herpesvirus 1 from cryoelectron microscopy. J Virol. 1990 Feb; 64(2):563-73. Baker TS, Newcomb WW, Booy FP, Brown JC, Steven AC. PMID: 2153224; PMCID: PMC249145.
      View in: PubMed   Mentions: 56     Fields:    Translation:AnimalsCells
    173. Magnification calibration and the determination of spherical virus diameters using cryo-microscopy. Ultramicroscopy. 1989 Jul-Aug; 30(3):281-97. Olson NH, Baker TS. PMID: 2800042; PMCID: PMC4167718.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    174. The capsid of small papova viruses contains 72 pentameric capsomeres: direct evidence from cryo-electron-microscopy of simian virus 40. Biophys J. 1989 Feb; 55(2):243-53. Baker TS, Drak J, Bina M. PMID: 2540847; PMCID: PMC1330465.
      View in: PubMed   Mentions: 31     Fields:    Translation:Cells
    175. Reconstruction of the three-dimensional structure of simian virus 40 and visualization of the chromatin core. Proc Natl Acad Sci U S A. 1988 Jan; 85(2):422-6. Baker TS, Drak J, Bina M. PMID: 2829185; PMCID: PMC279561.
      View in: PubMed   Mentions: 67     Fields:    Translation:Cells
    176. Gap junction structures. VII. Analysis of connexon images obtained with cationic and anionic negative stains. J Mol Biol. 1985 Jul 05; 184(1):81-98. Baker TS, Sosinsky GE, Caspar DL, Gall C, Goodenough DA. PMID: 2411939; PMCID: PMC4147872.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    177. Gap junction structures. VI. Variation and conservation in connexon conformation and packing. Biophys J. 1984 Jan; 45(1):208-18. Makowski L, Caspar DL, Phillips WC, Baker TS, Goodenough DA. PMID: 6324904; PMCID: PMC1435272.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    178. A Description of the Techniques and Application of Molecular Replacement Used to Determine the Structure of Polyoma Virus Capsid at 22.5 Å Resolution. Acta Crystallogr B. 1983 Aug; 39(4):505-516. Rayment I, Baker TS, Caspar DL. PMID: 25242833; PMCID: PMC4167719.
      View in: PubMed   Mentions: 2     Fields:    
    179. Polyoma virus capsid structure at 22.5 A resolution. Nature. 1982 Jan 14; 295(5845):110-5. Rayment I, Baker TS, Caspar DL, Murakami WT. PMID: 6276752; PMCID: PMC4144041.
      View in: PubMed   Mentions: 95     Fields:    Translation:Cells
    180. Structure of the tubulin dimer in zinc-induced sheets. J Mol Biol. 1978 Jul 25; 123(1):89-106. Baker TS, Amos LA. PMID: 682196.
      View in: PubMed   Mentions: 23     Fields:    Translation:Cells
    181. The structure of form I crystals of D-ribulose-1,5-diphosphate carboxylase. J Mol Biol. 1975 Feb 05; 91(4):391-9. Baker TS, Eisenberg D, Eiserling FA, Weissman L. PMID: 1152035; PMCID: PMC4167682.
      View in: PubMed   Mentions: 28     Fields:    Translation:AnimalsCells
    Timothy's Networks
    Concepts (470)
    Derived automatically from this person's publications.
    Explore
    _
    Co-Authors (15)
    People in Profiles who have published with this person.
    Explore
    _
    Similar People (60)
    People who share similar concepts with this person.
    Explore
    _
    Same Department
    Search Department
    _

    UCSD Profiles is managed by the UC San Diego Altman Clinical and Translational Research Institute (ACTRI).
    This site is running Profiles RNS version UCSF-v3.1.0-16-gff1bd585 on PROFILES-PWEB04. We use cookies to operate our website. We also use cookies to analyze our site’s performance and improve your experience on our site. For more information about how we use cookies, please see our Website Terms of Use.

    Copyright © The Regents of the University of California