Smruthi Karthikeyan

Title(s)Postdoctoral Scholar, Pediatrics
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
ORCID ORCID Icon0000-0001-6226-4536 Additional info
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    Georgia Institute of Technology, AtlantaMS PhDEnvironmental Engineering
    Columbia University, New YorkMSEarth and Environmental Engineering

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nat Methods. 2022 04; 19(4):374-380. Knyazev S, Chhugani K, Sarwal V, Ayyala R, Singh H, Karthikeyan S, Deshpande D, Baykal PI, Comarova Z, Lu A, Porozov Y, Vasylyeva TI, Wertheim JO, Tierney BT, Chiu CY, Sun R, Wu A, Abedalthagafi MS, Pak VM, Nagaraj SH, Smith AL, Skums P, Pasaniuc B, Komissarov A, Mason CE, Bortz E, Lemey P, Kondrashov F, Beerenwinkel N, Lam TT, Wu NC, Zelikovsky A, Knight R, Crandall KA, Mangul S. PMID: 35396471.
      View in: PubMed   Mentions:
    2. A novel, divergent alkane monooxygenase (alkB) clade involved in crude oil biodegradation. Environ Microbiol Rep. 2021 12; 13(6):830-840. Karthikeyan S, Hatt JK, Kim M, Spain JC, Huettel M, Kostka JE, Konstantinidis KT. PMID: 34672103.
      View in: PubMed   Mentions:    Fields:    
    3. Rapid, Large-Scale Wastewater Surveillance and Automated Reporting System Enable Early Detection of Nearly 85% of COVID-19 Cases on a University Campus. mSystems. 2021 Aug 31; 6(4):e0079321. Karthikeyan S, Nguyen A, McDonald D, Zong Y, Ronquillo N, Ren J, Zou J, Farmer S, Humphrey G, Henderson D, Javidi T, Messer K, Anderson C, Schooley R, Martin NK, Knight R. PMID: 34374562; PMCID: PMC8409724.
      View in: PubMed   Mentions:
    4. Beach sand oil spills select for generalist microbial populations. ISME J. 2021 11; 15(11):3418-3422. Heritier-Robbins P, Karthikeyan S, Hatt JK, Kim M, Huettel M, Kostka JE, Konstantinidis KT, Rodriguez-R LM. PMID: 34088976; PMCID: PMC8528907.
      View in: PubMed   Mentions:    Fields:    
    5. Metagenomic Characterization of Soil Microbial Communities in the Luquillo Experimental Forest (Puerto Rico) and Implications for Nitrogen Cycling. Appl Environ Microbiol. 2021 05 26; 87(12):e0054621. Karthikeyan S, Orellana LH, Johnston ER, Hatt JK, Löffler FE, Ayala-Del-Río HL, González G, Konstantinidis KT. PMID: 33837013; PMCID: PMC8174771.
      View in: PubMed   Mentions:    Fields:    Translation:CellsPHPublic Health
    6. Wastewater Surveillance for SARS-CoV-2 on College Campuses: Initial Efforts, Lessons Learned, and Research Needs. Int J Environ Res Public Health. 2021 04 22; 18(9). Harris-Lovett S, Nelson KL, Beamer P, Bischel HN, Bivins A, Bruder A, Butler C, Camenisch TD, De Long SK, Karthikeyan S, Larsen DA, Meierdiercks K, Mouser PJ, Pagsuyoin S, Prasek SM, Radniecki TS, Ram JL, Roper DK, Safford H, Sherchan SP, Shuster W, Stalder T, Wheeler RT, Korfmacher KS. PMID: 33922263; PMCID: PMC8122720.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansPHPublic Health
    7. High-Throughput Wastewater SARS-CoV-2 Detection Enables Forecasting of Community Infection Dynamics in San Diego County. mSystems. 2021 Mar 02; 6(2). Karthikeyan S, Ronquillo N, Belda-Ferre P, Alvarado D, Javidi T, Longhurst CA, Knight R. PMID: 33653938; PMCID: PMC8546963.
      View in: PubMed   Mentions: 4  
    8. Metagenomic insights into the effect of sulfate on enhanced biological phosphorus removal. Appl Microbiol Biotechnol. 2021 Mar; 105(5):2181-2193. Matsuura N, Masakke Y, Karthikeyan S, Kanazawa S, Honda R, Yamamoto-Ikemoto R, Konstantinidis KT. PMID: 33555362.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    9. Integrated Omics Elucidate the Mechanisms Driving the Rapid Biodegradation of Deepwater Horizon Oil in Intertidal Sediments Undergoing Oxic-Anoxic Cycles. Environ Sci Technol. 2020 08 18; 54(16):10088-10099. Karthikeyan S, Kim M, Heritier-Robbins P, Hatt JK, Spain JC, Overholt WA, Huettel M, Kostka JE, Konstantinidis KT. PMID: 32667785.
      View in: PubMed   Mentions: 1     Fields:    Translation:PHPublic Health
    10. Genome repository of oil systems: An interactive and searchable database that expands the catalogued diversity of crude oil-associated microbes. Environ Microbiol. 2020 06; 22(6):2094-2106. Karthikeyan S, Rodriguez-R LM, Heritier-Robbins P, Hatt JK, Huettel M, Kostka JE, Konstantinidis KT. PMID: 32114693.
      View in: PubMed   Mentions:    Fields:    Translation:PHPublic Health
    11. Erratum to "First description of two moderately halophilic and psychrotolerant Mycoplasma species isolated from cephalopods and proposal of Mycoplasma marinum sp. nov. and Mycoplasma todarod is sp. nov" [Syst. Appl. Microbiol. 42 (2019) 457-467]. Syst Appl Microbiol. 2020 01; 43(1):126027. Ramírez AS, Vega-Orellana OM, Viver T, Poveda JB, Rosales RS, Poveda CG, Spergser J, Szostak MP, Caballero MJ, Ressel L, Bradbury JM, Tavío MM, Karthikeyan S, Amann R, Konstantinidis KT, Rosselló-Móra R. PMID: 31699460.
      View in: PubMed   Mentions:    Fields:    
    12. First description of two moderately halophilic and psychrotolerant Mycoplasma species isolated from cephalopods and proposal of Mycoplasma marinum sp. nov. and Mycoplasma todarodis sp. nov. Syst Appl Microbiol. 2019 Jul; 42(4):457-467. Ramírez AS, Vega-Orellana OM, Viver T, Poveda JB, Rosales RS, Poveda CG, Spergser J, Szostak MP, Caballero MJ, Ressel L, Bradbury JM, Mar Tavío M, Karthikeyan S, Amann R, Konstantinidis KT, Rossello-Mora R. PMID: 31072660.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    13. "Candidatus Macondimonas diazotrophica", a novel gammaproteobacterial genus dominating crude-oil-contaminated coastal sediments. ISME J. 2019 08; 13(8):2129-2134. Karthikeyan S, Rodriguez-R LM, Heritier-Robbins P, Kim M, Overholt WA, Gaby JC, Hatt JK, Spain JC, Rosselló-Móra R, Huettel M, Kostka JE, Konstantinidis KT. PMID: 30952995; PMCID: PMC6776044.
      View in: PubMed   Mentions: 2     Fields:    Translation:CellsPHPublic Health
    14. Immobilized Biocatalyst for Detection and Destruction of the Insensitive Explosive, 2,4-Dinitroanisole (DNAN). Environ Sci Technol. 2016 10 18; 50(20):11193-11199. Karthikeyan S, Kurt Z, Pandey G, Spain JC. PMID: 27617621.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    15. Biodegradation of 2,4-dinitroanisole (DNAN) by Nocardioides sp. JS1661 in water, soil and bioreactors. J Hazard Mater. 2016 07 15; 312:37-44. Karthikeyan S, Spain JC. PMID: 27015377.
      View in: PubMed   Mentions: 5     Fields:    Translation:CellsPHPublic Health
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