Shane Crotty

Title(s)Adjunct Professor, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Priming antibody responses to the fusion peptide in rhesus macaques. NPJ Vaccines. 2024 Jul 12; 9(1):126. Cottrell CA, Pratap PP, Cirelli KM, Carnathan DG, Enemuo CA, Antanasijevic A, Ozorowski G, Sewall LM, Gao H, Allen JD, Nogal B, Silva M, Bhiman J, Pauthner M, Irvine DJ, Montefiori D, Crispin M, Burton DR, Silvestri G, Crotty S, Ward AB. PMID: 38997302; PMCID: PMC11245479.
      View in: PubMed   Mentions:
    2. Author Correction: Vaccination induces broadly neutralizing antibody precursors to HIV gp41. Nat Immunol. 2024 Jun 14. Schiffner T, Phung I, Ray R, Irimia A, Tian M, Swanson O, Lee JH, Lee CD, Marina-Zárate E, Cho SY, Huang J, Ozorowski G, Skog PD, Serra AM, Rantalainen K, Allen JD, Baboo S, Rodriguez OL, Himansu S, Zhou J, Hurtado J, Flynn CT, McKenney K, Havenar-Daughton C, Saha S, Shields K, Schultze S, Smith ML, Liang CH, Toy L, Pecetta S, Lin YC, Willis JR, Sesterhenn F, Kulp DW, Hu X, Cottrell CA, Zhou X, Ruiz J, Wang X, Nair U, Kirsch KH, Cheng HL, Davis J, Kalyuzhniy O, Liguori A, Diedrich JK, Ngo JT, Lewis V, Phelps N, Tingle RD, Spencer S, Georgeson E, Adachi Y, Kubitz M, Eskandarzadeh S, Elsliger MA, Amara RR, Landais E, Briney B, Burton DR, Carnathan DG, Silvestri G, Watson CT, Yates JR, Paulson JC, Crispin M, Grigoryan G, Ward AB, Sok D, Alt FW, Wilson IA, Batista FD, Crotty S, Schief WR. PMID: 38877179.
      View in: PubMed   Mentions: 1     Fields:    
    3. Vaccination induces broadly neutralizing antibody precursors to HIV gp41. Nat Immunol. 2024 Jun; 25(6):1073-1082. Schiffner T, Phung I, Ray R, Irimia A, Tian M, Swanson O, Lee JH, Lee CD, Marina-Zárate E, Cho SY, Huang J, Ozorowski G, Skog PD, Serra AM, Rantalainen K, Allen JD, Baboo S, Rodriguez OL, Himansu S, Zhou J, Hurtado J, Flynn CT, McKenney K, Havenar-Daughton C, Saha S, Shields K, Schultze S, Smith ML, Liang CH, Toy L, Pecetta S, Lin YC, Willis JR, Sesterhenn F, Kulp DW, Hu X, Cottrell CA, Zhou X, Ruiz J, Wang X, Nair U, Kirsch KH, Cheng HL, Davis J, Kalyuzhniy O, Liguori A, Diedrich JK, Ngo JT, Lewis V, Phelps N, Tingle RD, Spencer S, Georgeson E, Adachi Y, Kubitz M, Eskandarzadeh S, Elsliger MA, Amara RR, Landais E, Briney B, Burton DR, Carnathan DG, Silvestri G, Watson CT, Yates JR, Paulson JC, Crispin M, Grigoryan G, Ward AB, Sok D, Alt FW, Wilson IA, Batista FD, Crotty S, Schief WR. PMID: 38816615; PMCID: PMC11147780.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCellsPHPublic Health
    4. Affinity gaps among B cells in germinal centers drive the selection of MPER precursors. Nat Immunol. 2024 Jun; 25(6):1083-1096. Ray R, Schiffner T, Wang X, Yan Y, Rantalainen K, Lee CD, Parikh S, Reyes RA, Dale GA, Lin YC, Pecetta S, Giguere S, Swanson O, Kratochvil S, Melzi E, Phung I, Madungwe L, Kalyuzhniy O, Warner J, Weldon SR, Tingle R, Lamperti E, Kirsch KH, Phelps N, Georgeson E, Adachi Y, Kubitz M, Nair U, Crotty S, Wilson IA, Schief WR, Batista FD. PMID: 38816616; PMCID: PMC11147770.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    5. SARS-CoV-2 breakthrough infections enhance T cell response magnitude, breadth, and epitope repertoire. Cell Rep Med. 2024 Jun 18; 5(6):101583. Tarke A, Ramezani-Rad P, Alves Pereira Neto T, Lee Y, Silva-Moraes V, Goodwin B, Bloom N, Siddiqui L, Avalos L, Frazier A, Zhang Z, da Silva Antunes R, Dan J, Crotty S, Grifoni A, Sette A. PMID: 38781962.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    6. Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates. Science. 2024 May 17; 384(6697):eadj8321. Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR. PMID: 38753769.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    7. Author Correction: Exploring synergies between B- and T-cell vaccine approaches to optimize immune responses against HIV-workshop report. NPJ Vaccines. 2024 Mar 14; 9(1):61. Maciel M, Amara RR, Bar KJ, Crotty S, Deeks SG, Duplessis C, Gaiha G, McElrath MJ, McMichael A, Palin A, Rutishauser R, Shapiro S, Smiley ST, D'Souza MP. PMID: 38485736; PMCID: PMC10940590.
      View in: PubMed   Mentions:
    8. Exploring synergies between B- and T-cell vaccine approaches to optimize immune responses against HIV-workshop report. NPJ Vaccines. 2024 Feb 21; 9(1):39. Maciel M, Amara RR, Bar KJ, Crotty S, Deeks SG, Duplessis C, Gaiha G, McElrath MJ, McMichael A, Palin A, Rutishauser R, Shapiro S, Smiley ST, D'Souza MP. PMID: 38383616; PMCID: PMC10881492.
      View in: PubMed   Mentions: 1  
    9. Cytokines in Follicular Helper T Cell Biology in Physiologic and Pathologic Conditions. Immune Netw. 2024 Feb; 24(1):e8. Choi J, Crotty S, Choi YS. PMID: 38455461; PMCID: PMC10917579.
      View in: PubMed   Mentions:
    10. SARS-CoV-2 monoclonal antibody treatment followed by vaccination shifts human memory B cell epitope recognition suggesting antibody feedback. bioRxiv. 2023 Nov 22. Coelho CH, Bloom N, Ramirez SI, Parikh UM, Heaps A, Sieg SF, Greninger A, Ritz J, Moser C, Eron JJ, Currier JS, Klekotka P, Wohl DA, Daar ES, Li J, Hughes MD, Chew KW, Smith DM, Crotty S, Accelerating COVID-19 Therapeutic Interventions and Vaccines–2/A5401 (ACTIV-2/A5401) Study Team. PMID: 38045374; PMCID: PMC10690233.
      View in: PubMed   Mentions:
    11. A combined adjuvant approach primes robust germinal center responses and humoral immunity in non-human primates. Nat Commun. 2023 11 04; 14(1):7107. Phung I, Rodrigues KA, Marina-Zárate E, Maiorino L, Pahar B, Lee WH, Melo M, Kaur A, Allers C, Fahlberg M, Grasperge BF, Dufour JP, Schiro F, Aye PP, Lopez PG, Torres JL, Ozorowski G, Eskandarzadeh S, Kubitz M, Georgeson E, Groschel B, Nedellec R, Bick M, Kaczmarek Michaels K, Gao H, Shen X, Carnathan DG, Silvestri G, Montefiori DC, Ward AB, Hangartner L, Veazey RS, Burton DR, Schief WR, Irvine DJ, Crotty S. PMID: 37925510; PMCID: PMC10625619.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    12. Early antiviral CD4 and CD8 T cell responses are associated with upper respiratory tract clearance of SARS-CoV-2. bioRxiv. 2023 Oct 26. Ramirez SI, Lopez PG, Faraji F, Parikh UM, Heaps A, Ritz J, Moser C, Eron JJ, Wohl DA, Currier JS, Daar ES, Greninger AL, Klekotka P, Grifoni A, Weiskopf D, Sette A, Peters B, Hughes MD, Chew KW, Smith DM, Crotty S, ACTIV-2/A5401 Study Team. PMID: 37961119; PMCID: PMC10634820.
      View in: PubMed   Mentions:
    13. Mpox vaccine and infection-driven human immune signatures: an immunological analysis of an observational study. Lancet Infect Dis. 2023 11; 23(11):1302-1312. Cohn H, Bloom N, Cai GY, Clark JJ, Tarke A, Bermúdez-González MC, Altman DR, Lugo LA, Lobo FP, Marquez S, PVI study group, Chen JQ, Ren W, Qin L, Yates JL, Hunt DT, Lee WT, Crotty S, Krammer F, Grifoni A, Sette A, Simon V, Coelho CH. PMID: 37475115; PMCID: PMC10826035.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    14. Focusing antibody responses to the fusion peptide in rhesus macaques. bioRxiv. 2023 Jun 27. Cottrell CA, Pratap PP, Cirelli KM, Carnathan DG, Enemuo CA, Antanasijevic A, Ozorowski G, Sewall LM, Gao H, Greene KM, Allen JD, Ngo JT, Choe Y, Nogal B, Silva M, Bhiman J, Pauthner M, Irvine DJ, Montefiori D, Crispin M, Burton DR, Silvestri G, Crotty S, Ward AB. PMID: 37425865; PMCID: PMC10327030.
      View in: PubMed   Mentions:
    15. The Chromatin Regulator Mll1 Supports T Follicular Helper Cell Differentiation by Controlling Expression of Bcl6, LEF-1, and TCF-1. J Immunol. 2023 06 01; 210(11):1752-1760. Bélanger S, Haupt S, Faliti CE, Getzler A, Choi J, Diao H, Karunadharma PP, Bild NA, Pipkin ME, Crotty S. PMID: 37074193; PMCID: PMC10334568.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    16. Transcriptional programming of CD4+ TRM differentiation in viral infection balances effector- and memory-associated gene expression. Sci Immunol. 2023 05 12; 8(83):eabq7486. Nguyen QP, Takehara KK, Deng TZ, O'Shea S, Heeg M, Omilusik KD, Milner JJ, Quon S, Pipkin ME, Choi J, Crotty S, Goldrath AW. PMID: 37172104; PMCID: PMC10350289.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    17. Mll1 pioneers histone H3K4me3 deposition and promotes formation of CD8 + T stem cell memory. bioRxiv. 2023 Apr 15. Getzler AJ, Frederick MA, Milner JJ, Venables T, Diao H, Toma C, Nagaraja SD, Albao DS, Bélanger S, Tsuda SM, Kim J, Crotty S, Goldrath AW, Pipkin ME. PMID: 37090503; PMCID: PMC10120707.
      View in: PubMed   Mentions:
    18. DNA architectural protein CTCF facilitates subset-specific chromatin interactions to limit the formation of memory CD8+ T cells. Immunity. 2023 05 09; 56(5):959-978.e10. Quon S, Yu B, Russ BE, Tsyganov K, Nguyen H, Toma C, Heeg M, Hocker JD, Milner JJ, Crotty S, Pipkin ME, Turner SJ, Goldrath AW. PMID: 37040762; PMCID: PMC10265493.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    19. Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus. Cell Chem Biol. 2023 04 20; 30(4):403-411.e4. Moon-Walker A, Zhang Z, Zyla DS, Buck TK, Li H, Diaz Avalos R, Schendel SL, Hastie KM, Crotty S, Saphire EO. PMID: 36990092; PMCID: PMC11090681.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    20. The transcription factor Mef2d regulates B:T synapse-dependent GC-TFH differentiation and IL-21-mediated humoral immunity. Sci Immunol. 2023 03 31; 8(81):eadf2248. Kim YJ, Oh J, Jung S, Kim CJ, Choi J, Jeon YK, Kim HJ, Kim JW, Suh CH, Lee Y, Im SH, Crotty S, Choi YS. PMID: 36961907; PMCID: PMC10311795.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    21. Mpox vaccine and infection-driven human immune signatures. medRxiv. 2023 Mar 09. Cohn H, Bloom N, Cai G, Clark J, Tarke A, Bermúdez-González MC, Altman D, Lugo LA, Lobo FP, Marquez S, PVI study group, Chen JQ, Ren W, Qin L, Crotty S, Krammer F, Grifoni A, Sette A, Simon V, Coelho CH. PMID: 36945651; PMCID: PMC10029032.
      View in: PubMed   Mentions:
    22. T Cell Responses to SARS-CoV-2. Annu Rev Immunol. 2023 04 26; 41:343-373. Sette A, Sidney J, Crotty S. PMID: 36750314.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansAnimalsCells
    23. Acute and Postacute COVID-19 Outcomes Among Immunologically Naive Adults During Delta vs Omicron Waves. JAMA Netw Open. 2023 02 01; 6(2):e231181. Doll MK, Waghmare A, Heit A, Levenson Shakoor B, Kimball LE, Ozbek N, Blazevic RL, Mose L, Boonyaratanakornkit J, Stevens-Ayers TL, Cornell K, Sheppard BD, Hampson E, Sharmin F, Goodwin B, Dan JM, Archie T, O'Connor T, Heckerman D, Schmitz F, Boeckh M, Crotty S. PMID: 36853602; PMCID: PMC9975921.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    24. Development of Host Immune Response to Bacteriophage in a Lung Transplant Recipient on Adjunctive Phage Therapy for a Multidrug-Resistant Pneumonia. J Infect Dis. 2023 02 01; 227(3):311-316. Dan JM, Lehman SM, Al-Kolla R, Penziner S, Afshar K, Yung G, Golts E, Law N, Logan C, Kovach Z, Mearns G, Schooley RT, Aslam S, Crotty S. PMID: 36082999; PMCID: PMC10152496.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    25. Author Correction: Long-primed germinal centres with enduring affinity maturation and clonal migration. Nature. 2023 Feb; 614(7949):E43. Lee JH, Sutton HJ, Cottrell CA, Phung I, Ozorowski G, Sewall LM, Nedellec R, Nakao C, Silva M, Richey ST, Torres JL, Lee WH, Georgeson E, Kubitz M, Hodges S, Mullen TM, Adachi Y, Cirelli KM, Kaur A, Allers C, Fahlberg M, Grasperge BF, Dufour JP, Schiro F, Aye PP, Kalyuzhniy O, Liguori A, Carnathan DG, Silvestri G, Shen X, Montefiori DC, Veazey RS, Ward AB, Hangartner L, Burton DR, Irvine DJ, Schief WR, Crotty S. PMID: 36717721; PMCID: PMC9885408.
      View in: PubMed   Mentions:    Fields:    
    26. Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients. Cell Rep Med. 2023 02 21; 4(2):100935. Lam MTY, Duttke SH, Odish MF, Le HD, Hansen EA, Nguyen CT, Trescott S, Kim R, Deota S, Chang MW, Patel A, Hepokoski M, Alotaibi M, Rolfsen M, Perofsky K, Warden AS, Foley J, Ramirez SI, Dan JM, Abbott RK, Crotty S, Crotty Alexander LE, Malhotra A, Panda S, Benner CW, Coufal NG. PMID: 36758547; PMCID: PMC9874047.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    27. Author Correction: The persistence of memory: defining, engineering, and measuring vaccine durability. Nat Immunol. 2022 Dec 26. Palin AC, Alter G, Crotty S, Ellebedy AH, Lane MC, Lee FE, Locci M, Malaspina A, Mallia C, McElrath MJ, Pulendran B, Singh A, D'Souza MP. PMID: 36572838.
      View in: PubMed   Mentions:    Fields:    
    28. SARS-CoV-2 spike conformation determines plasma neutralizing activity elicited by a wide panel of human vaccines. Sci Immunol. 2022 12 23; 7(78):eadf1421. Bowen JE, Park YJ, Stewart C, Brown JT, Sharkey WK, Walls AC, Joshi A, Sprouse KR, McCallum M, Tortorici MA, Franko NM, Logue JK, Mazzitelli IG, Nguyen AW, Silva RP, Huang Y, Low JS, Jerak J, Tiles SW, Ahmed K, Shariq A, Dan JM, Zhang Z, Weiskopf D, Sette A, Snell G, Posavad CM, Iqbal NT, Geffner J, Bandera A, Gori A, Sallusto F, Maynard JA, Crotty S, Van Voorhis WC, Simmerling C, Grifantini R, Chu HY, Corti D, Veesler D. PMID: 36356052; PMCID: PMC9765460.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCellsPHPublic Health
    29. Bamlanivimab therapy for acute COVID-19 does not blunt SARS-CoV-2-specific memory T cell responses. JCI Insight. 2022 12 22; 7(24). Ramirez SI, Grifoni A, Weiskopf D, Parikh UM, Heaps A, Faraji F, Sieg SF, Ritz J, Moser C, Eron JJ, Currier JS, Klekotka P, Sette A, Wohl DA, Daar ES, Hughes MD, Chew KW, Smith DM, Crotty S, Accelerating COVID-19 Therapeutic Interventions and Vaccines–2/A5401 (ACTIV-2/A5401) Study Team. PMID: 36378539; PMCID: PMC9869965.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    30. SARS-CoV-2 human T cell epitopes: Adaptive immune response against COVID-19. Cell Host Microbe. 2022 Dec 14; 30(12):1788. Grifoni A, Sidney J, Vita R, Peters B, Crotty S, Weiskopf D, Sette A. PMID: 36521443.
      View in: PubMed   Mentions: 7     Fields:    
    31. Vaccination induces HIV broadly neutralizing antibody precursors in humans. Science. 2022 12 02; 378(6623):eadd6502. Leggat DJ, Cohen KW, Willis JR, Fulp WJ, deCamp AC, Kalyuzhniy O, Cottrell CA, Menis S, Finak G, Ballweber-Fleming L, Srikanth A, Plyler JR, Schiffner T, Liguori A, Rahaman F, Lombardo A, Philiponis V, Whaley RE, Seese A, Brand J, Ruppel AM, Hoyland W, Yates NL, Williams LD, Greene K, Gao H, Mahoney CR, Corcoran MM, Cagigi A, Taylor A, Brown DM, Ambrozak DR, Sincomb T, Hu X, Tingle R, Georgeson E, Eskandarzadeh S, Alavi N, Lu D, Mullen TM, Kubitz M, Groschel B, Maenza J, Kolokythas O, Khati N, Bethony J, Crotty S, Roederer M, Karlsson Hedestam GB, Tomaras GD, Montefiori D, Diemert D, Koup RA, Laufer DS, McElrath MJ, McDermott AB, Schief WR. PMID: 36454825.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCellsPHPublic HealthCTClinical Trials
    32. The persistence of memory: defining, engineering, and measuring vaccine durability. Nat Immunol. 2022 12; 23(12):1665-1668. Palin AC, Alter G, Crotty S, Ellebedy AH, Lane MC, Lee FE, Locci M, Malaspina A, Mallia C, McElrath MJ, Pulendran B, Singh A, D'Souza MP. PMID: 36456737; PMCID: PMC9916179.
      View in: PubMed   Mentions: 3     Fields:    Translation:PHPublic Health
    33. Acute and Post-Acute COVID-19 Outcomes Among Immunologically Naïve Adults During Delta Versus Omicron Waves. medRxiv. 2022 Nov 14. Doll MK, Waghmare A, Heit A, Levenson Shakoor B, Kimball LE, Ozbek N, Blazevic RL, Mose L, Boonyaratanakornkit J, Stevens-Ayers TL, Cornell K, Sheppard BD, Hampson E, Sharmin F, Goodwin B, Dan JM, Archie T, O'Connor T, Heckerman D, Schmitz F, Boeckh M, Crotty S. PMID: 36425923; PMCID: PMC9685683.
      View in: PubMed   Mentions:
    34. Mucosal and Systemic Responses to Severe Acute Respiratory Syndrome Coronavirus 2 Vaccination Determined by Severity of Primary Infection. mSphere. 2022 12 21; 7(6):e0027922. Sajadi MM, Myers A, Logue J, Saadat S, Shokatpour N, Quinn J, Newman M, Deming M, Rikhtegaran Tehrani Z, Magder LS, Karimi M, Abbasi A, Shlyak M, Baracco L, Frieman MB, Crotty S, Harris AD. PMID: 36321826; PMCID: PMC9769618.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCellsPHPublic Health
    35. NVX-CoV2373 vaccination induces functional SARS-CoV-2-specific CD4+ and CD8+ T cell responses. J Clin Invest. 2022 10 03; 132(19). Rydyznski Moderbacher C, Kim C, Mateus J, Plested J, Zhu M, Cloney-Clark S, Weiskopf D, Sette A, Fries L, Glenn G, Crotty S. PMID: 35943810; PMCID: PMC9525112.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCellsPHPublic Health
    36. Asymptomatic or symptomatic SARS-CoV-2 infection plus vaccination confers increased adaptive immunity to variants of concern. iScience. 2022 Oct 21; 25(10):105202. Sun P, Ramos I, Coelho CH, Grifoni A, Balinsky CA, Vangeti S, Tarke A, Bloom NI, Jani V, Jakubski SJ, Boulifard DA, Cooper E, Goforth CW, Marayag J, Marrone A, Nunez E, White L, Porter CK, Sugiharto VA, Schilling M, Mahajan AS, Beckett C, Sette A, Sealfon SC, Crotty S, Letizia AG. PMID: 36168391; PMCID: PMC9502440.
      View in: PubMed   Mentions: 1  
    37. Long-primed germinal centres with enduring affinity maturation and clonal migration. Nature. 2022 09; 609(7929):998-1004. Lee JH, Sutton HJ, Cottrell CA, Phung I, Ozorowski G, Sewall LM, Nedellec R, Nakao C, Silva M, Richey ST, Torres JL, Lee WH, Georgeson E, Kubitz M, Hodges S, Mullen TM, Adachi Y, Cirelli KM, Kaur A, Allers C, Fahlberg M, Grasperge BF, Dufour JP, Schiro F, Aye PP, Kalyuzhniy O, Liguori A, Carnathan DG, Silvestri G, Shen X, Montefiori DC, Veazey RS, Ward AB, Hangartner L, Burton DR, Irvine DJ, Schief WR, Crotty S. PMID: 36131022; PMCID: PMC9491273.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    38. The Transcription Factor YY-1 Is an Essential Regulator of T Follicular Helper Cell Differentiation. J Immunol. 2022 10 15; 209(8):1566-1573. Bélanger S, Haupt S, Freeman BL, Getzler AJ, Diao H, Pipkin ME, Crotty S. PMID: 36096645.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    39. Design and validation of HIV peptide pools for detection of HIV-specific CD4+ and CD8+ T cells. PLoS One. 2022; 17(8):e0268370. Al-Kolla R, Grifoni A, Crotty S, Sette A, Gianella S, Dan J. PMID: 35972938; PMCID: PMC9380920.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    40. Observations and Perspectives on Adaptive Immunity to Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). Clin Infect Dis. 2022 08 15; 75(Suppl 1):S24-S29. Dan J, da Silva Antunes R, Grifoni A, Weiskopf D, Crotty S, Sette A. PMID: 35441229; PMCID: PMC9383833.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    41. Broadly neutralizing antibodies to SARS-related viruses can be readily induced in rhesus macaques. Sci Transl Med. 2022 08 10; 14(657):eabl9605. He WT, Yuan M, Callaghan S, Musharrafieh R, Song G, Silva M, Beutler N, Lee WH, Yong P, Torres JL, Melo M, Zhou P, Zhao F, Zhu X, Peng L, Huang D, Anzanello F, Ricketts J, Parren M, Garcia E, Ferguson M, Rinaldi W, Rawlings SA, Nemazee D, Smith DM, Briney B, Safonova Y, Rogers TF, Dan JM, Zhang Z, Weiskopf D, Sette A, Crotty S, Irvine DJ, Ward AB, Wilson IA, Burton DR, Andrabi R. PMID: 35947674; PMCID: PMC10069796.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    42. Memory B cell development after asymptomatic or mild symptomatic SARS-CoV-2 infection. J Infect Dis. 2022 Jul 27. Kato Y, Bloom NI, Sun P, Balinsky CA, Qiu Q, Cheng Y, Jani V, Schilling MA, Goforth CW, Weir DL, Ramos I, Sealfon SC, Letizia AG, Crotty S. PMID: 35892131; PMCID: PMC9384564.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    43. Omicron spike function and neutralizing activity elicited by a comprehensive panel of vaccines. Science. 2022 08 19; 377(6608):890-894. Bowen JE, Addetia A, Dang HV, Stewart C, Brown JT, Sharkey WK, Sprouse KR, Walls AC, Mazzitelli IG, Logue JK, Franko NM, Czudnochowski N, Powell AE, Dellota E, Ahmed K, Ansari AS, Cameroni E, Gori A, Bandera A, Posavad CM, Dan JM, Zhang Z, Weiskopf D, Sette A, Crotty S, Iqbal NT, Corti D, Geffner J, Snell G, Grifantini R, Chu HY, Veesler D. PMID: 35857529; PMCID: PMC9348749.
      View in: PubMed   Mentions: 83     Fields:    Translation:HumansCells
    44. Immunological memory to SARS-CoV-2 infection and COVID-19 vaccines. Immunol Rev. 2022 09; 310(1):27-46. Sette A, Crotty S. PMID: 35733376; PMCID: PMC9349657.
      View in: PubMed   Mentions: 86     Fields:    Translation:HumansCells
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    95. Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals. Cell. 2020 06 25; 181(7):1489-1501.e15. Grifoni A, Weiskopf D, Ramirez SI, Mateus J, Dan JM, Moderbacher CR, Rawlings SA, Sutherland A, Premkumar L, Jadi RS, Marrama D, de Silva AM, Frazier A, Carlin AF, Greenbaum JA, Peters B, Krammer F, Smith DM, Crotty S, Sette A. PMID: 32473127; PMCID: PMC7237901.
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    96. Author Correction: A Engineered immunogen binding to alum adjuvant enhances humoral immunity. Nat Med. 2020 05; 26(5):804. Moyer TJ, Kato Y, Abraham W, Chang JYH, Kulp DW, Watson N, Turner HL, Menis S, Abbott RK, Bhiman JN, Melo MB, Simon HA, Herrera-De la Mata S, Liang S, Seumois G, Agarwal Y, Li N, Burton DR, Ward AB, Schief WR, Crotty S, Irvine DJ. PMID: 32405059; PMCID: PMC7223225.
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    97. Engineered immunogen binding to alum adjuvant enhances humoral immunity. Nat Med. 2020 03; 26(3):430-440. Moyer TJ, Kato Y, Abraham W, Chang JYH, Kulp DW, Watson N, Turner HL, Menis S, Abbott RK, Bhiman JN, Melo MB, Simon HA, Herrera-De la Mata S, Liang S, Seumois G, Agarwal Y, Li N, Burton DR, Ward AB, Schief WR, Crotty S, Irvine DJ. PMID: 32066977; PMCID: PMC7069805.
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    98. Normal human lymph node T follicular helper cells and germinal center B cells accessed via fine needle aspirations. J Immunol Methods. 2020 04; 479:112746. Havenar-Daughton C, Newton IG, Zare SY, Reiss SM, Schwan B, Suh MJ, Hasteh F, Levi G, Crotty S. PMID: 31958451; PMCID: PMC7200018.
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    99. Reinvigorating NIH Grant Peer Review. Immunity. 2020 01 14; 52(1):1-3. Crotty S, Blish C, Cadwell K, Chi H, Goldrath A, Green D, Kaech SM, Krummel M, Pepper M, Rothlin CV, Wherry EJ, Once-a-Year Pledge Supporters. PMID: 31940266.
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    100. Slow Delivery Immunization Enhances HIV Neutralizing Antibody and Germinal Center Responses via Modulation of Immunodominance. Cell. 2020 Jan 09; 180(1):206. Cirelli KM, Carnathan DG, Nogal B, Martin JT, Rodriguez OL, Upadhyay AA, Enemuo CA, Gebru EH, Choe Y, Viviano F, Nakao C, Pauthner MG, Reiss S, Cottrell CA, Smith ML, Bastidas R, Gibson W, Wolabaugh AN, Melo MB, Cossette B, Kumar V, Patel NB, Tokatlian T, Menis S, Kulp DW, Burton DR, Murrell B, Schief WR, Bosinger SE, Ward AB, Watson CT, Silvestri G, Irvine DJ, Crotty S. PMID: 31923396; PMCID: PMC7009795.
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    101. Rapid Germinal Center and Antibody Responses in Non-human Primates after a Single Nanoparticle Vaccine Immunization. Cell Rep. 2019 11 12; 29(7):1756-1766.e8. Havenar-Daughton C, Carnathan DG, Boopathy AV, Upadhyay AA, Murrell B, Reiss SM, Enemuo CA, Gebru EH, Choe Y, Dhadvai P, Viviano F, Kaushik K, Bhiman JN, Briney B, Burton DR, Bosinger SE, Schief WR, Irvine DJ, Silvestri G, Crotty S. PMID: 31722194; PMCID: PMC6905039.
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    102. A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses. Science. 2019 12 06; 366(6470). Steichen JM, Lin YC, Havenar-Daughton C, Pecetta S, Ozorowski G, Willis JR, Toy L, Sok D, Liguori A, Kratochvil S, Torres JL, Kalyuzhniy O, Melzi E, Kulp DW, Raemisch S, Hu X, Bernard SM, Georgeson E, Phelps N, Adachi Y, Kubitz M, Landais E, Umotoy J, Robinson A, Briney B, Wilson IA, Burton DR, Ward AB, Crotty S, Batista FD, Schief WR. PMID: 31672916; PMCID: PMC7092357.
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    103. Editorial overview: Vaccine immunology: what is seen and not seen. Curr Opin Immunol. 2019 08; 59:iii-v. Crotty S. PMID: 31235312.
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    104. T Follicular Helper Cell Biology: A Decade of Discovery and Diseases. Immunity. 2019 05 21; 50(5):1132-1148. Crotty S. PMID: 31117010; PMCID: PMC6532429.
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    105. Slow Delivery Immunization Enhances HIV Neutralizing Antibody and Germinal Center Responses via Modulation of Immunodominance. Cell. 2019 05 16; 177(5):1153-1171.e28. Cirelli KM, Carnathan DG, Nogal B, Martin JT, Rodriguez OL, Upadhyay AA, Enemuo CA, Gebru EH, Choe Y, Viviano F, Nakao C, Pauthner MG, Reiss S, Cottrell CA, Smith ML, Bastidas R, Gibson W, Wolabaugh AN, Melo MB, Cossette B, Kumar V, Patel NB, Tokatlian T, Menis S, Kulp DW, Burton DR, Murrell B, Schief WR, Bosinger SE, Ward AB, Watson CT, Silvestri G, Irvine DJ, Crotty S. PMID: 31080066; PMCID: PMC6619430.
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    106. Recurrent group A Streptococcus tonsillitis is an immunosusceptibility disease involving antibody deficiency and aberrant TFH cells. Sci Transl Med. 2019 02 06; 11(478). Dan JM, Havenar-Daughton C, Kendric K, Al-Kolla R, Kaushik K, Rosales SL, Anderson EL, LaRock CN, Vijayanand P, Seumois G, Layfield D, Cutress RI, Ottensmeier CH, Lindestam Arlehamn CS, Sette A, Nizet V, Bothwell M, Brigger M, Crotty S. PMID: 30728285; PMCID: PMC6561727.
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    107. Ezh2 programs TFH differentiation by integrating phosphorylation-dependent activation of Bcl6 and polycomb-dependent repression of p19Arf. Nat Commun. 2018 12 21; 9(1):5452. Li F, Zeng Z, Xing S, Gullicksrud JA, Shan Q, Choi J, Badovinac VP, Crotty S, Peng W, Xue HH. PMID: 30575739; PMCID: PMC6303346.
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    108. Vaccine-Induced Protection from Homologous Tier 2 SHIV Challenge in Nonhuman Primates Depends on Serum-Neutralizing Antibody Titers. Immunity. 2019 01 15; 50(1):241-252.e6. Pauthner MG, Nkolola JP, Havenar-Daughton C, Murrell B, Reiss SM, Bastidas R, Prévost J, Nedellec R, von Bredow B, Abbink P, Cottrell CA, Kulp DW, Tokatlian T, Nogal B, Bianchi M, Li H, Lee JH, Butera ST, Evans DT, Hangartner L, Finzi A, Wilson IA, Wyatt RT, Irvine DJ, Schief WR, Ward AB, Sanders RW, Crotty S, Shaw GM, Barouch DH, Burton DR. PMID: 30552025; PMCID: PMC6335502.
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    109. When designing vaccines, consider the starting material: the human B cell repertoire. Curr Opin Immunol. 2018 08; 53:209-216. Havenar-Daughton C, Abbott RK, Schief WR, Crotty S. PMID: 30190230; PMCID: PMC6148213.
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    110. Innovative approaches to track lymph node germinal center responses to evaluate development of broadly neutralizing antibodies in human HIV vaccine trials. Vaccine. 2018 09 11; 36(38):5671-5677. Patricia D'Souza M, Allen MA, Baumblatt JAG, Boggiano C, Crotty S, Grady C, Havenar-Daughton C, Heit A, Hu DJ, Kunwar N, McElrath MJ, Lymph Node Webinar Contributors. PMID: 30097219.
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    111. Th1/Th17 polarization persists following whole-cell pertussis vaccination despite repeated acellular boosters. J Clin Invest. 2018 08 31; 128(9):3853-3865. da Silva Antunes R, Babor M, Carpenter C, Khalil N, Cortese M, Mentzer AJ, Seumois G, Petro CD, Purcell LA, Vijayanand P, Crotty S, Pulendran B, Peters B, Sette A. PMID: 29920186; PMCID: PMC6118631.
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    112. Differential cell-intrinsic regulations of germinal center B and T cells by miR-146a and miR-146b. Nat Commun. 2018 07 16; 9(1):2757. Cho S, Lee HM, Yu IS, Choi YS, Huang HY, Hashemifar SS, Lin LL, Chen MC, Afanasiev ND, Khan AA, Lin SW, Rudensky AY, Crotty S, Lu LF. PMID: 30013024; PMCID: PMC6048122.
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    113. The human naive B cell repertoire contains distinct subclasses for a germline-targeting HIV-1 vaccine immunogen. Sci Transl Med. 2018 07 04; 10(448). Havenar-Daughton C, Sarkar A, Kulp DW, Toy L, Hu X, Deresa I, Kalyuzhniy O, Kaushik K, Upadhyay AA, Menis S, Landais E, Cao L, Diedrich JK, Kumar S, Schiffner T, Reiss SM, Seumois G, Yates JR, Paulson JC, Bosinger SE, Wilson IA, Schief WR, Crotty S. PMID: 29973404; PMCID: PMC6145074.
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    114. The Transcription Factor Runx3 Establishes Chromatin Accessibility of cis-Regulatory Landscapes that Drive Memory Cytotoxic T Lymphocyte Formation. Immunity. 2018 04 17; 48(4):659-674.e6. Wang D, Diao H, Getzler AJ, Rogal W, Frederick MA, Milner J, Yu B, Crotty S, Goldrath AW, Pipkin ME. PMID: 29669249; PMCID: PMC6750808.
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    115. BALDR: a computational pipeline for paired heavy and light chain immunoglobulin reconstruction in single-cell RNA-seq data. Genome Med. 2018 03 20; 10(1):20. Upadhyay AA, Kauffman RC, Wolabaugh AN, Cho A, Patel NB, Reiss SM, Havenar-Daughton C, Dawoud RA, Tharp GK, Sanz I, Pulendran B, Crotty S, Lee FE, Wrammert J, Bosinger SE. PMID: 29558968; PMCID: PMC5859752.
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    116. Characterization of murine antibody responses to vaccinia virus envelope protein A14 reveals an immunodominant antigen lacking of effective neutralization targets. Virology. 2018 05; 518:284-292. Meng X, Kaever T, Yan B, Traktman P, Zajonc DM, Peters B, Crotty S, Xiang Y. PMID: 29558682; PMCID: PMC5911218.
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    117. Apolipoprotein AI prevents regulatory to follicular helper T cell switching during atherosclerosis. Nat Commun. 2018 03 15; 9(1):1095. Gaddis DE, Padgett LE, Wu R, McSkimming C, Romines V, Taylor AM, McNamara CA, Kronenberg M, Crotty S, Thomas MJ, Sorci-Thomas MG, Hedrick CC. PMID: 29545616; PMCID: PMC5854619.
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    118. Do Memory CD4 T Cells Keep Their Cell-Type Programming: Plasticity versus Fate Commitment? Complexities of Interpretation due to the Heterogeneity of Memory CD4 T Cells, Including T Follicular Helper Cells. Cold Spring Harb Perspect Biol. 2018 03 01; 10(3). Crotty S. PMID: 28432129; PMCID: PMC5830898.
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    119. Epitopes for neutralizing antibodies induced by HIV-1 envelope glycoprotein BG505 SOSIP trimers in rabbits and macaques. PLoS Pathog. 2018 02; 14(2):e1006913. Klasse PJ, Ketas TJ, Cottrell CA, Ozorowski G, Debnath G, Camara D, Francomano E, Pugach P, Ringe RP, LaBranche CC, van Gils MJ, Bricault CA, Barouch DH, Crotty S, Silvestri G, Kasturi S, Pulendran B, Wilson IA, Montefiori DC, Sanders RW, Ward AB, Moore JP. PMID: 29474444; PMCID: PMC5841823.
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    120. Correction: Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses. PLoS One. 2018; 13(2):e0193382. da Silva Antunes R, Paul S, Sidney J, Weiskopf D, Dan JM, Phillips E, Mallal S, Crotty S, Sette A, Lindestam Arlehamn CS. PMID: 29462188; PMCID: PMC5819815.
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    121. Erratum: Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours. Nature. 2018 02 15; 554(7692):392. Milner JJ, Toma C, Yu B, Zhang K, Omilusik K, Phan AT, Wang D, Getzler AJ, Nguyen T, Crotty S, Wang W, Pipkin ME, Goldrath AW. PMID: 29320476.
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    122. Raging evolution of a B cell response to a viral infection. Nat Rev Immunol. 2018 02; 18(2):79. Crotty S. PMID: 29292394.
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    123. Precursor Frequency and Affinity Determine B Cell Competitive Fitness in Germinal Centers, Tested with Germline-Targeting HIV Vaccine Immunogens. Immunity. 2018 01 16; 48(1):133-146.e6. Abbott RK, Lee JH, Menis S, Skog P, Rossi M, Ota T, Kulp DW, Bhullar D, Kalyuzhniy O, Havenar-Daughton C, Schief WR, Nemazee D, Crotty S. PMID: 29287996; PMCID: PMC5773359.
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    124. Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours. Nature. 2017 12 14; 552(7684):253-257. Milner JJ, Toma C, Yu B, Zhang K, Omilusik K, Phan AT, Wang D, Getzler AJ, Nguyen T, Crotty S, Wang W, Pipkin ME, Goldrath AW. PMID: 29211713; PMCID: PMC5747964.
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    125. Structure-based design of native-like HIV-1 envelope trimers to silence non-neutralizing epitopes and eliminate CD4 binding. Nat Commun. 2017 11 21; 8(1):1655. Kulp DW, Steichen JM, Pauthner M, Hu X, Schiffner T, Liguori A, Cottrell CA, Havenar-Daughton C, Ozorowski G, Georgeson E, Kalyuzhniy O, Willis JR, Kubitz M, Adachi Y, Reiss SM, Shin M, de Val N, Ward AB, Crotty S, Burton DR, Schief WR. PMID: 29162799; PMCID: PMC5698488.
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    126. Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8. J Biol Chem. 2018 01 05; 293(1):390-401. Matho MH, Schlossman A, Gilchuk IM, Miller G, Mikulski Z, Hupfer M, Wang J, Bitra A, Meng X, Xiang Y, Kaever T, Doukov T, Ley K, Crotty S, Peters B, Hsieh-Wilson LC, Crowe JE, Zajonc DM. PMID: 29123031; PMCID: PMC5766908.
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    127. Comparative analysis of activation induced marker (AIM) assays for sensitive identification of antigen-specific CD4 T cells. PLoS One. 2017; 12(10):e0186998. Reiss S, Baxter AE, Cirelli KM, Dan JM, Morou A, Daigneault A, Brassard N, Silvestri G, Routy JP, Havenar-Daughton C, Crotty S, Kaufmann DE. PMID: 29065175; PMCID: PMC5655442.
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    128. Germinal center enhancement by extended antigen availability. Curr Opin Immunol. 2017 Aug; 47:64-69. Cirelli KM, Crotty S. PMID: 28738289; PMCID: PMC5626612.
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    129. A distinct subpopulation of CD25- T-follicular regulatory cells localizes in the germinal centers. Proc Natl Acad Sci U S A. 2017 08 01; 114(31):E6400-E6409. Wing JB, Kitagawa Y, Locci M, Hume H, Tay C, Morita T, Kidani Y, Matsuda K, Inoue T, Kurosaki T, Crotty S, Coban C, Ohkura N, Sakaguchi S. PMID: 28698369; PMCID: PMC5547636.
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    130. Elicitation of Robust Tier 2 Neutralizing Antibody Responses in Nonhuman Primates by HIV Envelope Trimer Immunization Using Optimized Approaches. Immunity. 2017 06 20; 46(6):1073-1088.e6. Pauthner M, Havenar-Daughton C, Sok D, Nkolola JP, Bastidas R, Boopathy AV, Carnathan DG, Chandrashekar A, Cirelli KM, Cottrell CA, Eroshkin AM, Guenaga J, Kaushik K, Kulp DW, Liu J, McCoy LE, Oom AL, Ozorowski G, Post KW, Sharma SK, Steichen JM, de Taeye SW, Tokatlian T, Torrents de la Peña A, Butera ST, LaBranche CC, Montefiori DC, Silvestri G, Wilson IA, Irvine DJ, Sanders RW, Schief WR, Ward AB, Wyatt RT, Barouch DH, Crotty S, Burton DR. PMID: 28636956; PMCID: PMC5483234.
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    131. Erratum: Epigenetic landscapes reveal transcription factors that regulate CD8+ T cell differentiation. Nat Immunol. 2017 05 18; 18(6):705. Yu B, Zhang K, Milner JJ, Toma C, Chen R, Scott-Browne JP, Pereira RM, Crotty S, Chang JT, Pipkin ME, Wang W, Goldrath AW. PMID: 28518161.
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    132. Allergen-specific immunotherapy modulates the balance of circulating Tfh and Tfr cells. J Allergy Clin Immunol. 2018 02; 141(2):775-777.e6. Schulten V, Tripple V, Seumois G, Qian Y, Scheuermann RH, Fu Z, Locci M, Rosales S, Vijayanand P, Sette A, Alam R, Crotty S, Peters B. PMID: 28506846; PMCID: PMC5682232.
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    133. Development of an animal model of progressive vaccinia in nu/nu mice and the use of bioluminescence imaging for assessment of the efficacy of monoclonal antibodies against vaccinial B5 and L1 proteins. Antiviral Res. 2017 08; 144:8-20. Zaitseva M, Thomas A, Meseda CA, Cheung CYK, Diaz CG, Xiang Y, Crotty S, Golding H. PMID: 28495463.
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    134. T cells control the generation of nanomolar-affinity anti-glycan antibodies. J Clin Invest. 2017 Apr 03; 127(4):1491-1504. Polonskaya Z, Deng S, Sarkar A, Kain L, Comellas-Aragones M, McKay CS, Kaczanowska K, Holt M, McBride R, Palomo V, Self KM, Taylor S, Irimia A, Mehta SR, Dan JM, Brigger M, Crotty S, Schoenberger SP, Paulson JC, Wilson IA, Savage PB, Finn MG, Teyton L. PMID: 28287405; PMCID: PMC5373877.
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    135. Epigenetic landscapes reveal transcription factors that regulate CD8+ T cell differentiation. Nat Immunol. 2017 05; 18(5):573-582. Yu B, Zhang K, Milner JJ, Toma C, Chen R, Scott-Browne JP, Pereira RM, Crotty S, Chang JT, Pipkin ME, Wang W, Goldrath AW. PMID: 28288100; PMCID: PMC5395420.
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    136. Adjuvanting a Simian Immunodeficiency Virus Vaccine with Toll-Like Receptor Ligands Encapsulated in Nanoparticles Induces Persistent Antibody Responses and Enhanced Protection in TRIM5α Restrictive Macaques. J Virol. 2017 02 15; 91(4). Kasturi SP, Kozlowski PA, Nakaya HI, Burger MC, Russo P, Pham M, Kovalenkov Y, Silveira ELV, Havenar-Daughton C, Burton SL, Kilgore KM, Johnson MJ, Nabi R, Legere T, Sher ZJ, Chen X, Amara RR, Hunter E, Bosinger SE, Spearman P, Crotty S, Villinger F, Derdeyn CA, Wrammert J, Pulendran B. PMID: 27928002; PMCID: PMC5286877.
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    137. Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses. PLoS One. 2017; 12(1):e0169086. da Silva Antunes R, Paul S, Sidney J, Weiskopf D, Dan JM, Phillips E, Mallal S, Crotty S, Sette A, Lindestam Arlehamn CS. PMID: 28081174; PMCID: PMC5230748.
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    138. Tfh cells and HIV bnAbs, an immunodominance model of the HIV neutralizing antibody generation problem. Immunol Rev. 2017 01; 275(1):49-61. Havenar-Daughton C, Lee JH, Crotty S. PMID: 28133798.
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    139. Direct Probing of Germinal Center Responses Reveals Immunological Features and Bottlenecks for Neutralizing Antibody Responses to HIV Env Trimer. Cell Rep. 2016 11 22; 17(9):2195-2209. Havenar-Daughton C, Carnathan DG, Torrents de la Peña A, Pauthner M, Briney B, Reiss SM, Wood JS, Kaushik K, van Gils MJ, Rosales SL, van der Woude P, Locci M, Le KM, de Taeye SW, Sok D, Mohammed AUR, Huang J, Gumber S, Garcia A, Kasturi SP, Pulendran B, Moore JP, Ahmed R, Seumois G, Burton DR, Sanders RW, Silvestri G, Crotty S. PMID: 27880897; PMCID: PMC5142765.
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    140. Sustained antigen availability during germinal center initiation enhances antibody responses to vaccination. Proc Natl Acad Sci U S A. 2016 10 25; 113(43):E6639-E6648. Tam HH, Melo MB, Kang M, Pelet JM, Ruda VM, Foley MH, Hu JK, Kumari S, Crampton J, Baldeon AD, Sanders RW, Moore JP, Crotty S, Langer R, Anderson DG, Chakraborty AK, Irvine DJ. PMID: 27702895; PMCID: PMC5086995.
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    141. Response to Comment on "A Cytokine-Independent Approach To Identify Antigen-Specific Human Germinal Center T Follicular Helper Cells and Rare Antigen-Specific CD4+ T Cells in Blood". J Immunol. 2016 10 01; 197(7):2558. Dan JM, Havenar-Daughton C, Silvestri G, Sette A, Crotty S. PMID: 27638936.
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    142. Erratum: Activin A programs the differentiation of human TFH cells. Nat Immunol. 2016 09 20; 17(10):1235. Locci M, Wu JE, Arumemi F, Mikulski Z, Dahlberg C, Miller AT, Crotty S. PMID: 27648551.
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    143. Dances with cytokines, featuring TFH cells, IL-21, IL-4 and B cells. Nat Immunol. 2016 09 20; 17(10):1135-6. Bélanger S, Crotty S. PMID: 27648538.
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    144. Erratum: A TRAF-like motif of the inducible costimulator ICOS controls development of germinal center TFH cells via the kinase TBK1. Nat Immunol. 2016 07 19; 17(8):1005. Pedros C, Zhang Y, Hu JK, Choi YS, Canonigo-Balancio AJ, Yates JR, Altman A, Crotty S, Kong KF. PMID: 27434013.
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    145. Activin A programs the differentiation of human TFH cells. Nat Immunol. 2016 08; 17(8):976-84. Locci M, Wu JE, Arumemi F, Mikulski Z, Dahlberg C, Miller AT, Crotty S. PMID: 27376469; PMCID: PMC4955732.
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    146. A Cytokine-Independent Approach To Identify Antigen-Specific Human Germinal Center T Follicular Helper Cells and Rare Antigen-Specific CD4+ T Cells in Blood. J Immunol. 2016 08 01; 197(3):983-93. Dan JM, Lindestam Arlehamn CS, Weiskopf D, da Silva Antunes R, Havenar-Daughton C, Reiss SM, Brigger M, Bothwell M, Sette A, Crotty S. PMID: 27342848; PMCID: PMC4955771.
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    147. Cytokine-Independent Detection of Antigen-Specific Germinal Center T Follicular Helper Cells in Immunized Nonhuman Primates Using a Live Cell Activation-Induced Marker Technique. J Immunol. 2016 08 01; 197(3):994-1002. Havenar-Daughton C, Reiss SM, Carnathan DG, Wu JE, Kendric K, Torrents de la Peña A, Kasturi SP, Dan JM, Bothwell M, Sanders RW, Pulendran B, Silvestri G, Crotty S. PMID: 27335502; PMCID: PMC4955744.
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    148. CRISPR-Mediated Slamf1Δ/Δ Slamf5Δ/Δ Slamf6Δ/Δ Triple Gene Disruption Reveals NKT Cell Defects but Not T Follicular Helper Cell Defects. PLoS One. 2016; 11(5):e0156074. Hu JK, Crampton JC, Locci M, Crotty S. PMID: 27223891; PMCID: PMC4880187.
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    149. Id2 reinforces TH1 differentiation and inhibits E2A to repress TFH differentiation. Nat Immunol. 2016 07; 17(7):834-43. Shaw LA, Bélanger S, Omilusik KD, Cho S, Scott-Browne JP, Nance JP, Goulding J, Lasorella A, Lu LF, Crotty S, Goldrath AW. PMID: 27213691; PMCID: PMC4915968.
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    150. Th1 versus Th2 T cell polarization by whole-cell and acellular childhood pertussis vaccines persists upon re-immunization in adolescence and adulthood. Cell Immunol. 2016 Jun-Jul; 304-305:35-43. Bancroft T, Dillon MB, da Silva Antunes R, Paul S, Peters B, Crotty S, Lindestam Arlehamn CS, Sette A. PMID: 27212461; PMCID: PMC4899275.
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    151. A TRAF-like motif of the inducible costimulator ICOS controls development of germinal center TFH cells via the kinase TBK1. Nat Immunol. 2016 07; 17(7):825-33. Pedros C, Zhang Y, Hu JK, Choi YS, Canonigo-Balancio AJ, Yates JR, Altman A, Crotty S, Kong KF. PMID: 27135603; PMCID: PMC4915981.
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    152. Linear Epitopes in Vaccinia Virus A27 Are Targets of Protective Antibodies Induced by Vaccination against Smallpox. J Virol. 2016 May; 90(9):4334-4345. Kaever T, Matho MH, Meng X, Crickard L, Schlossman A, Xiang Y, Crotty S, Peters B, Zajonc DM. PMID: 26889021; PMCID: PMC4836320.
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    153. HIV-1 broadly neutralizing antibody precursor B cells revealed by germline-targeting immunogen. Science. 2016 Mar 25; 351(6280):1458-63. Jardine JG, Kulp DW, Havenar-Daughton C, Sarkar A, Briney B, Sok D, Sesterhenn F, Ereño-Orbea J, Kalyuzhniy O, Deresa I, Hu X, Spencer S, Jones M, Georgeson E, Adachi Y, Kubitz M, deCamp AC, Julien JP, Wilson IA, Burton DR, Crotty S, Schief WR. PMID: 27013733; PMCID: PMC4872700.
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    154. CXCL13 is a plasma biomarker of germinal center activity. Proc Natl Acad Sci U S A. 2016 Mar 08; 113(10):2702-7. Havenar-Daughton C, Lindqvist M, Heit A, Wu JE, Reiss SM, Kendric K, Bélanger S, Kasturi SP, Landais E, Akondy RS, McGuire HM, Bothwell M, Vagefi PA, Scully E, IAVI Protocol C Principal Investigators, Tomaras GD, Davis MM, Poignard P, Ahmed R, Walker BD, Pulendran B, McElrath MJ, Kaufmann DE, Crotty S. PMID: 26908875; PMCID: PMC4790995.
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    155. Cutting Edge: NFAT Transcription Factors Promote the Generation of Follicular Helper T Cells in Response to Acute Viral Infection. J Immunol. 2016 Mar 01; 196(5):2015-9. Martinez GJ, Hu JK, Pereira RM, Crampton JS, Togher S, Bild N, Crotty S, Rao A. PMID: 26851216; PMCID: PMC4761453.
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    156. Broadly Neutralizing Antibody Responses in a Large Longitudinal Sub-Saharan HIV Primary Infection Cohort. PLoS Pathog. 2016 Jan; 12(1):e1005369. Landais E, Huang X, Havenar-Daughton C, Murrell B, Price MA, Wickramasinghe L, Ramos A, Bian CB, Simek M, Allen S, Karita E, Kilembe W, Lakhi S, Inambao M, Kamali A, Sanders EJ, Anzala O, Edward V, Bekker LG, Tang J, Gilmour J, Kosakovsky-Pond SL, Phung P, Wrin T, Crotty S, Godzik A, Poignard P. PMID: 26766578; PMCID: PMC4713061.
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    157. Immunogenicity of Stabilized HIV-1 Envelope Trimers with Reduced Exposure of Non-neutralizing Epitopes. Cell. 2015 Dec 17; 163(7):1702-15. de Taeye SW, Ozorowski G, Torrents de la Peña A, Guttman M, Julien JP, van den Kerkhof TL, Burger JA, Pritchard LK, Pugach P, Yasmeen A, Crampton J, Hu J, Bontjer I, Torres JL, Arendt H, DeStefano J, Koff WC, Schuitemaker H, Eggink D, Berkhout B, Dean H, LaBranche C, Crotty S, Crispin M, Montefiori DC, Klasse PJ, Lee KK, Moore JP, Wilson IA, Ward AB, Sanders RW. PMID: 26687358; PMCID: PMC4732737.
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    158. Reversible Reprogramming of Circulating Memory T Follicular Helper Cell Function during Chronic HIV Infection. J Immunol. 2015 Dec 15; 195(12):5625-36. Cubas R, van Grevenynghe J, Wills S, Kardava L, Santich BH, Buckner CM, Muir R, Tardif V, Nichols C, Procopio F, He Z, Metcalf T, Ghneim K, Locci M, Ancuta P, Routy JP, Trautmann L, Li Y, McDermott AB, Koup RA, Petrovas C, Migueles SA, Connors M, Tomaras GD, Moir S, Crotty S, Haddad EK. PMID: 26546609; PMCID: PMC4670798.
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    159. Bcl6 middle domain repressor function is required for T follicular helper cell differentiation and utilizes the corepressor MTA3. Proc Natl Acad Sci U S A. 2015 Oct 27; 112(43):13324-9. Nance JP, Bélanger S, Johnston RJ, Hu JK, Takemori T, Crotty S. PMID: 26460037; PMCID: PMC4629362.
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    160. Structural and Functional Characterization of Anti-A33 Antibodies Reveal a Potent Cross-Species Orthopoxviruses Neutralizer. PLoS Pathog. 2015 Sep; 11(9):e1005148. Matho MH, Schlossman A, Meng X, Benhnia MR, Kaever T, Buller M, Doronin K, Parker S, Peters B, Crotty S, Xiang Y, Zajonc DM. PMID: 26325270; PMCID: PMC4556652.
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    161. Murine Antibody Responses to Cleaved Soluble HIV-1 Envelope Trimers Are Highly Restricted in Specificity. J Virol. 2015 Oct; 89(20):10383-98. Hu JK, Crampton JC, Cupo A, Ketas T, van Gils MJ, Sliepen K, de Taeye SW, Sok D, Ozorowski G, Deresa I, Stanfield R, Ward AB, Burton DR, Klasse PJ, Sanders RW, Moore JP, Crotty S. PMID: 26246566; PMCID: PMC4580201.
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    162. LEF-1 and TCF-1 orchestrate T(FH) differentiation by regulating differentiation circuits upstream of the transcriptional repressor Bcl6. Nat Immunol. 2015 Sep; 16(9):980-90. Choi YS, Gullicksrud JA, Xing S, Zeng Z, Shan Q, Li F, Love PE, Peng W, Xue HH, Crotty S. PMID: 26214741; PMCID: PMC4545301.
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    163. Dengue virus infection elicits highly polarized CX3CR1+ cytotoxic CD4+ T cells associated with protective immunity. Proc Natl Acad Sci U S A. 2015 Aug 04; 112(31):E4256-63. Weiskopf D, Bangs DJ, Sidney J, Kolla RV, De Silva AD, de Silva AM, Crotty S, Peters B, Sette A. PMID: 26195744; PMCID: PMC4534238.
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    164. Cutting edge: T follicular helper cell differentiation is defective in the absence of Bcl6 BTB repressor domain function. J Immunol. 2015 Jun 15; 194(12):5599-603. Nance JP, Bélanger S, Johnston RJ, Takemori T, Crotty S. PMID: 25957170; PMCID: PMC4456636.
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    165. In vivo RNAi screens: concepts and applications. Trends Immunol. 2015 May; 36(5):315-22. Crotty S, Pipkin ME. PMID: 25937561; PMCID: PMC4810674.
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    166. BCL6 orchestrates Tfh cell differentiation via multiple distinct mechanisms. J Exp Med. 2015 Apr 06; 212(4):539-53. Hatzi K, Nance JP, Kroenke MA, Bothwell M, Haddad EK, Melnick A, Crotty S. PMID: 25824819; PMCID: PMC4387288.
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    167. A brief history of T cell help to B cells. Nat Rev Immunol. 2015 Mar; 15(3):185-9. Crotty S. PMID: 25677493; PMCID: PMC4414089.
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    168. The transcription factor NFAT promotes exhaustion of activated CD8⁺ T cells. Immunity. 2015 Feb 17; 42(2):265-278. Martinez GJ, Pereira RM, Äijö T, Kim EY, Marangoni F, Pipkin ME, Togher S, Heissmeyer V, Zhang YC, Crotty S, Lamperti ED, Ansel KM, Mempel TR, Lähdesmäki H, Hogan PG, Rao A. PMID: 25680272; PMCID: PMC4346317.
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    169. Retroviral vector expression in TCR transgenic CD4⁺ T cells. Methods Mol Biol. 2015; 1291:49-61. Choi YS, Crotty S. PMID: 25836301.
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    170. Murine anti-vaccinia virus D8 antibodies target different epitopes and differ in their ability to block D8 binding to CS-E. PLoS Pathog. 2014 Dec; 10(12):e1004495. Matho MH, de Val N, Miller GM, Brown J, Schlossman A, Meng X, Crotty S, Peters B, Xiang Y, Hsieh-Wilson LC, Ward AB, Zajonc DM. PMID: 25474621; PMCID: PMC4256255.
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    171. T follicular helper cell differentiation, function, and roles in disease. Immunity. 2014 Oct 16; 41(4):529-42. Crotty S. PMID: 25367570; PMCID: PMC4223692.
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    172. In vivo RNA interference screens identify regulators of antiviral CD4(+) and CD8(+) T cell differentiation. Immunity. 2014 Aug 21; 41(2):325-38. Chen R, Bélanger S, Frederick MA, Li B, Johnston RJ, Xiao N, Liu YC, Sharma S, Peters B, Rao A, Crotty S, Pipkin ME. PMID: 25148027; PMCID: PMC4160313.
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    173. Potent neutralization of vaccinia virus by divergent murine antibodies targeting a common site of vulnerability in L1 protein. J Virol. 2014 Oct; 88(19):11339-55. Kaever T, Meng X, Matho MH, Schlossman A, Li S, Sela-Culang I, Ofran Y, Buller M, Crump RW, Parker S, Frazier A, Crotty S, Zajonc DM, Peters B, Xiang Y. PMID: 25031354; PMCID: PMC4178804.
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    174. Early lymphoid responses and germinal center formation correlate with lower viral load set points and better prognosis of simian immunodeficiency virus infection. J Immunol. 2014 Jul 15; 193(2):797-806. Hong JJ, Amancha PK, Rogers KA, Courtney CL, Havenar-Daughton C, Crotty S, Ansari AA, Villinger F. PMID: 24907346; PMCID: PMC4084862.
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    175. The transcription factor Foxp1 is a critical negative regulator of the differentiation of follicular helper T cells. Nat Immunol. 2014 Jul; 15(7):667-75. Wang H, Geng J, Wen X, Bi E, Kossenkov AV, Wolf AI, Tas J, Choi YS, Takata H, Day TJ, Chang LY, Sprout SL, Becker EK, Willen J, Tian L, Wang X, Xiao C, Jiang P, Crotty S, Victora GD, Showe LC, Tucker HO, Erikson J, Hu H. PMID: 24859450; PMCID: PMC4142638.
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    176. The E3 ubiquitin ligase Itch is required for the differentiation of follicular helper T cells. Nat Immunol. 2014 Jul; 15(7):657-66. Xiao N, Eto D, Elly C, Peng G, Crotty S, Liu YC. PMID: 24859451; PMCID: PMC4289613.
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    177. Using a combined computational-experimental approach to predict antibody-specific B cell epitopes. Structure. 2014 Apr 08; 22(4):646-57. Sela-Culang I, Benhnia MR, Matho MH, Kaever T, Maybeno M, Schlossman A, Nimrod G, Li S, Xiang Y, Zajonc D, Crotty S, Ofran Y, Peters B. PMID: 24631463.
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    178. Exogenous OX40 stimulation during lymphocytic choriomeningitis virus infection impairs follicular Th cell differentiation and diverts CD4 T cells into the effector lineage by upregulating Blimp-1. J Immunol. 2013 Nov 15; 191(10):5026-35. Boettler T, Choi YS, Salek-Ardakani S, Cheng Y, Moeckel F, Croft M, Crotty S, von Herrath M. PMID: 24101548; PMCID: PMC3915873.
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    179. Human circulating PD-1+CXCR3-CXCR5+ memory Tfh cells are highly functional and correlate with broadly neutralizing HIV antibody responses. Immunity. 2013 Oct 17; 39(4):758-69. Locci M, Havenar-Daughton C, Landais E, Wu J, Kroenke MA, Arlehamn CL, Su LF, Cubas R, Davis MM, Sette A, Haddad EK, International AIDS Vaccine Initiative Protocol C Principal Investigators, Poignard P, Crotty S. PMID: 24035365; PMCID: PMC3996844.
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    180. Modulation of SAP dependent T:B cell interactions as a strategy to improve vaccination. Curr Opin Virol. 2013 Jun; 3(3):363-70. Hu J, Havenar-Daughton C, Crotty S. PMID: 23743125; PMCID: PMC3763741.
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    181. Dynamic regulation of Bcl6 in follicular helper CD4 T (Tfh) cells. Curr Opin Immunol. 2013 Jun; 25(3):366-72. Choi YS, Yang JA, Crotty S. PMID: 23688737; PMCID: PMC3763739.
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    182. Bcl6 expressing follicular helper CD4 T cells are fate committed early and have the capacity to form memory. J Immunol. 2013 Apr 15; 190(8):4014-26. Choi YS, Yang JA, Yusuf I, Johnston RJ, Greenbaum J, Peters B, Crotty S. PMID: 23487426; PMCID: PMC3626566.
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    183. Inadequate T follicular cell help impairs B cell immunity during HIV infection. Nat Med. 2013 Apr; 19(4):494-9. Cubas RA, Mudd JC, Savoye AL, Perreau M, van Grevenynghe J, Metcalf T, Connick E, Meditz A, Freeman GJ, Abesada-Terk G, Jacobson JM, Brooks AD, Crotty S, Estes JD, Pantaleo G, Lederman MM, Haddad EK. PMID: 23475201; PMCID: PMC3843317.
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    184. Cutting edge: STAT1 is required for IL-6-mediated Bcl6 induction for early follicular helper cell differentiation. J Immunol. 2013 Apr 01; 190(7):3049-53. Choi YS, Eto D, Yang JA, Lao C, Crotty S. PMID: 23447690; PMCID: PMC3626564.
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    185. Harnessing CD4⁺ T cell responses in HIV vaccine development. Nat Med. 2013 Feb; 19(2):143-9. Streeck H, D'Souza MP, Littman DR, Crotty S. PMID: 23389614; PMCID: PMC3626561.
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    186. Unusual features of vaccinia virus extracellular virion form neutralization resistance revealed in human antibody responses to the smallpox vaccine. J Virol. 2013 Feb; 87(3):1569-85. Benhnia MR, Maybeno M, Blum D, Aguilar-Sino R, Matho M, Meng X, Head S, Felgner PL, Zajonc DM, Koriazova L, Kato S, Burton DR, Xiang Y, Crowe JE, Peters B, Crotty S. PMID: 23152530; PMCID: PMC3554146.
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    187. Protection of rabbits and immunodeficient mice against lethal poxvirus infections by human monoclonal antibodies. PLoS One. 2012; 7(11):e48706. Crickard L, Babas T, Seth S, Silvera P, Koriazova L, Crotty S. PMID: 23133652; PMCID: PMC3487784.
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    188. A Blueprint for HIV Vaccine Discovery. Cell Host Microbe. 2012 Oct 18; 12(4):396-407. Burton DR, Ahmed R, Barouch DH, Butera ST, Crotty S, Godzik A, Kaufmann DE, McElrath MJ, Nussenzweig MC, Pulendran B, Scanlan CN, Schief WR, Silvestri G, Streeck H, Walker BD, Walker LM, Ward AB, Wilson IA, Wyatt R. PMID: 23084910; PMCID: PMC3513329.
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    189. OX40 facilitates control of a persistent virus infection. PLoS Pathog. 2012 Sep; 8(9):e1002913. Boettler T, Moeckel F, Cheng Y, Heeg M, Salek-Ardakani S, Crotty S, Croft M, von Herrath MG. PMID: 22969431; PMCID: PMC3435255.
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    190. The receptor Ly108 functions as a SAP adaptor-dependent on-off switch for T cell help to B cells and NKT cell development. Immunity. 2012 Jun 29; 36(6):986-1002. Kageyama R, Cannons JL, Zhao F, Yusuf I, Lao C, Locci M, Schwartzberg PL, Crotty S. PMID: 22683125; PMCID: PMC3389310.
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    191. Structural and biochemical characterization of the vaccinia virus envelope protein D8 and its recognition by the antibody LA5. J Virol. 2012 Aug; 86(15):8050-8. Matho MH, Maybeno M, Benhnia MR, Becker D, Meng X, Xiang Y, Crotty S, Peters B, Zajonc DM. PMID: 22623786; PMCID: PMC3421696.
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    192. The 1-1-1 fallacy. Immunol Rev. 2012 May; 247(1):133-42. Crotty S. PMID: 22500837.
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    193. Bcl6 and Maf cooperate to instruct human follicular helper CD4 T cell differentiation. J Immunol. 2012 Apr 15; 188(8):3734-44. Kroenke MA, Eto D, Locci M, Cho M, Davidson T, Haddad EK, Crotty S. PMID: 22427637; PMCID: PMC3324673.
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    194. STAT5 is a potent negative regulator of TFH cell differentiation. J Exp Med. 2012 Feb 13; 209(2):243-50. Johnston RJ, Choi YS, Diamond JA, Yang JA, Crotty S. PMID: 22271576; PMCID: PMC3281266.
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    195. An epitope conserved in orthopoxvirus A13 envelope protein is the target of neutralizing and protective antibodies. Virology. 2011 Sep 15; 418(1):67-73. Xu C, Meng X, Yan B, Crotty S, Deng J, Xiang Y. PMID: 21810533; PMCID: PMC3163717.
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    196. ICOS receptor instructs T follicular helper cell versus effector cell differentiation via induction of the transcriptional repressor Bcl6. Immunity. 2011 Jun 24; 34(6):932-46. Choi YS, Kageyama R, Eto D, Escobar TC, Johnston RJ, Monticelli L, Lao C, Crotty S. PMID: 21636296; PMCID: PMC3124577.
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    197. B cell-specific expression of B7-2 is required for follicular Th cell function in response to vaccinia virus. J Immunol. 2011 May 01; 186(9):5294-303. Salek-Ardakani S, Choi YS, Rafii-El-Idrissi Benhnia M, Flynn R, Arens R, Shoenberger S, Crotty S, Croft M, Salek-Ardakani S. PMID: 21441451; PMCID: PMC3089765.
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    198. IL-21 and IL-6 are critical for different aspects of B cell immunity and redundantly induce optimal follicular helper CD4 T cell (Tfh) differentiation. PLoS One. 2011 Mar 14; 6(3):e17739. Eto D, Lao C, DiToro D, Barnett B, Escobar TC, Kageyama R, Yusuf I, Crotty S. PMID: 21423809; PMCID: PMC3056724.
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    199. Protective murine and human monoclonal antibodies against eczema vaccinatum. Antivir Ther. 2011; 16(1):67-75. Tomimori Y, Kawakami Y, McCausland MM, Ando T, Koriazova L, Kato S, Kawakami T, Crotty S. PMID: 21311110; PMCID: PMC3046123.
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    200. Follicular helper CD4 T cells (TFH). Annu Rev Immunol. 2011; 29:621-63. Crotty S. PMID: 21314428.
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    201. Germinal center T follicular helper cell IL-4 production is dependent on signaling lymphocytic activation molecule receptor (CD150). J Immunol. 2010 Jul 01; 185(1):190-202. Yusuf I, Kageyama R, Monticelli L, Johnston RJ, Ditoro D, Hansen K, Barnett B, Crotty S. PMID: 20525889; PMCID: PMC2913439.
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    202. In vivo regulation of Bcl6 and T follicular helper cell development. J Immunol. 2010 Jul 01; 185(1):313-26. Poholek AC, Hansen K, Hernandez SG, Eto D, Chandele A, Weinstein JS, Dong X, Odegard JM, Kaech SM, Dent AL, Crotty S, Craft J. PMID: 20519643; PMCID: PMC2891136.
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    203. Polyfunctional CD4+ T cell responses to a set of pathogenic arenaviruses provide broad population coverage. Immunome Res. 2010 May 17; 6:4. Kotturi MF, Botten J, Maybeno M, Sidney J, Glenn J, Bui HH, Oseroff C, Crotty S, Peters B, Grey H, Altmann DM, Buchmeier MJ, Sette A. PMID: 20478058; PMCID: PMC2880318.
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    204. Uncovering the interplay between CD8, CD4 and antibody responses to complex pathogens. Future Microbiol. 2010 Feb; 5(2):221-39. Moutaftsi M, Tscharke DC, Vaughan K, Koelle DM, Stern L, Calvo-Calle M, Ennis F, Terajima M, Sutter G, Crotty S, Drexler I, Franchini G, Yewdell JW, Head SR, Blum J, Peters B, Sette A. PMID: 20143946; PMCID: PMC3363998.
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    205. Effectors and memories: Bcl-6 and Blimp-1 in T and B lymphocyte differentiation. Nat Immunol. 2010 Feb; 11(2):114-20. Crotty S, Johnston RJ, Schoenberger SP. PMID: 20084069; PMCID: PMC2864556.
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    206. Combination therapy of vaccinia virus infection with human anti-H3 and anti-B5 monoclonal antibodies in a small animal model. Antivir Ther. 2010; 15(4):661-75. McCausland MM, Benhnia MR, Crickard L, Laudenslager J, Granger SW, Tahara T, Kubo R, Koriazova L, Kato S, Crotty S. PMID: 20587859; PMCID: PMC2898516.
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    207. Definition of epitopes and antigens recognized by vaccinia specific immune responses: their conservation in variola virus sequences, and use as a model system to study complex pathogens. Vaccine. 2009 Dec 30; 27 Suppl 6:G21-6. Sette A, Grey H, Oseroff C, Peters B, Moutaftsi M, Crotty S, Assarsson E, Greenbaum J, Kim Y, Kolla R, Tscharke D, Koelle D, Johnson RP, Blum J, Head S, Sidney J. PMID: 20006135; PMCID: PMC2928716.
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    208. The smallpox vaccine induces an early neutralizing IgM response. Vaccine. 2009 Dec 10; 28(1):140-7. Moyron-Quiroz JE, McCausland MM, Kageyama R, Sette A, Crotty S. PMID: 19822230; PMCID: PMC2788018.
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    209. Heavily isotype-dependent protective activities of human antibodies against vaccinia virus extracellular virion antigen B5. J Virol. 2009 Dec; 83(23):12355-67. Benhnia MR, McCausland MM, Laudenslager J, Granger SW, Rickert S, Koriazova L, Tahara T, Kubo RT, Kato S, Crotty S. PMID: 19793826; PMCID: PMC2786738.
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    210. Bcl6 and Blimp-1 are reciprocal and antagonistic regulators of T follicular helper cell differentiation. Science. 2009 Aug 21; 325(5943):1006-10. Johnston RJ, Poholek AC, DiToro D, Yusuf I, Eto D, Barnett B, Dent AL, Craft J, Crotty S. PMID: 19608860; PMCID: PMC2766560.
      View in: PubMed   Mentions: 853     Fields:    Translation:AnimalsCells
    211. Inhibition of NK cell activity by IL-17 allows vaccinia virus to induce severe skin lesions in a mouse model of eczema vaccinatum. J Exp Med. 2009 Jun 08; 206(6):1219-25. Kawakami Y, Tomimori Y, Yumoto K, Hasegawa S, Ando T, Tagaya Y, Crotty S, Kawakami T. PMID: 19468065; PMCID: PMC2715052.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansAnimalsCells
    212. Shane Crotty: exploring immune memory. Interview by Kira Heller. J Exp Med. 2009 May 11; 206(5):974-5. Crotty S. PMID: 19433621; PMCID: PMC2715035.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    213. NKT cells prevent chronic joint inflammation after infection with Borrelia burgdorferi. Proc Natl Acad Sci U S A. 2008 Dec 16; 105(50):19863-8. Tupin E, Benhnia MR, Kinjo Y, Patsey R, Lena CJ, Haller MC, Caimano MJ, Imamura M, Wong CH, Crotty S, Radolf JD, Sellati TJ, Kronenberg M. PMID: 19060201; PMCID: PMC2604993.
      View in: PubMed   Mentions: 57     Fields:    Translation:AnimalsCells
    214. OX40 drives protective vaccinia virus-specific CD8 T cells. J Immunol. 2008 Dec 01; 181(11):7969-76. Salek-Ardakani S, Moutaftsi M, Crotty S, Sette A, Croft M. PMID: 19017988; PMCID: PMC2729132.
      View in: PubMed   Mentions: 53     Fields:    Translation:AnimalsCells
    215. Vaccinia virus extracellular enveloped virion neutralization in vitro and protection in vivo depend on complement. J Virol. 2009 Feb; 83(3):1201-15. Benhnia MR, McCausland MM, Moyron J, Laudenslager J, Granger S, Rickert S, Koriazova L, Kubo R, Kato S, Crotty S. PMID: 19019965; PMCID: PMC2620895.
      View in: PubMed   Mentions: 71     Fields:    Translation:HumansAnimalsCells
    216. Selective CD4+ T cell help for antibody responses to a large viral pathogen: deterministic linkage of specificities. Immunity. 2008 Jun; 28(6):847-58. Sette A, Moutaftsi M, Moyron-Quiroz J, McCausland MM, Davies DH, Johnston RJ, Peters B, Rafii-El-Idrissi Benhnia M, Hoffmann J, Su HP, Singh K, Garboczi DN, Head S, Grey H, Felgner PL, Crotty S. PMID: 18549802; PMCID: PMC2504733.
      View in: PubMed   Mentions: 121     Fields:    Translation:AnimalsCells
    217. Redundancy and plasticity of neutralizing antibody responses are cornerstone attributes of the human immune response to the smallpox vaccine. J Virol. 2008 Apr; 82(7):3751-68. Benhnia MR, McCausland MM, Su HP, Singh K, Hoffmann J, Davies DH, Felgner PL, Head S, Sette A, Garboczi DN, Crotty S. PMID: 18234801; PMCID: PMC2268460.
      View in: PubMed   Mentions: 63     Fields:    Translation:HumansCells
    218. Quantitative PCR technique for detecting lymphocytic choriomeningitis virus in vivo. J Virol Methods. 2008 Jan; 147(1):167-76. McCausland MM, Crotty S. PMID: 17920702; PMCID: PMC2330273.
      View in: PubMed   Mentions: 68     Fields:    Translation:AnimalsCells
    219. Monkeypox-induced immunity and failure of childhood smallpox vaccination to provide complete protection. Clin Vaccine Immunol. 2007 Oct; 14(10):1318-27. Karem KL, Reynolds M, Hughes C, Braden Z, Nigam P, Crotty S, Glidewell J, Ahmed R, Amara R, Damon IK. PMID: 17715329; PMCID: PMC2168110.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansAnimalsCells
    220. Chronic lymphocytic choriomeningitis virus infection actively down-regulates CD4+ T cell responses directed against a broad range of epitopes. J Immunol. 2007 Jul 15; 179(2):1058-67. Mothé BR, Stewart BS, Oseroff C, Bui HH, Stogiera S, Garcia Z, Dow C, Rodriguez-Carreno MP, Kotturi M, Pasquetto V, Botten J, Crotty S, Janssen E, Buchmeier MJ, Sette A. PMID: 17617598.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    221. Vaccinia virus-specific CD4+ T cell responses target a set of antigens largely distinct from those targeted by CD8+ T cell responses. J Immunol. 2007 Jun 01; 178(11):6814-20. Moutaftsi M, Bui HH, Peters B, Sidney J, Salek-Ardakani S, Oseroff C, Pasquetto V, Crotty S, Croft M, Lefkowitz EJ, Grey H, Sette A. PMID: 17513729.
      View in: PubMed   Mentions: 72     Fields:    Translation:AnimalsCells
    222. Proteome-wide analysis of the serological response to vaccinia and smallpox. Proteomics. 2007 May; 7(10):1678-86. Davies DH, Molina DM, Wrammert J, Miller J, Hirst S, Mu Y, Pablo J, Unal B, Nakajima-Sasaki R, Liang X, Crotty S, Karem KL, Damon IK, Ahmed R, Villarreal L, Felgner PL. PMID: 17443847.
      View in: PubMed   Mentions: 102     Fields:    Translation:HumansPHPublic Health
    223. SAP regulation of follicular helper CD4 T cell development and humoral immunity is independent of SLAM and Fyn kinase. J Immunol. 2007 Jan 15; 178(2):817-28. McCausland MM, Yusuf I, Tran H, Ono N, Yanagi Y, Crotty S. PMID: 17202343.
      View in: PubMed   Mentions: 54     Fields:    Translation:AnimalsCells
    224. Resolution of a chronic viral infection after interleukin-10 receptor blockade. J Exp Med. 2006 Oct 30; 203(11):2461-72. Ejrnaes M, Filippi CM, Martinic MM, Ling EM, Togher LM, Crotty S, von Herrath MG. PMID: 17030951; PMCID: PMC2118120.
      View in: PubMed   Mentions: 288     Fields:    Translation:AnimalsCells
    225. Hypogammaglobulinemia and exacerbated CD8 T-cell-mediated immunopathology in SAP-deficient mice with chronic LCMV infection mimics human XLP disease. Blood. 2006 Nov 01; 108(9):3085-93. Crotty S, McCausland MM, Aubert RD, Wherry EJ, Ahmed R. PMID: 16788096.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimalsCells
    226. SAP regulates T cell-mediated help for humoral immunity by a mechanism distinct from cytokine regulation. J Exp Med. 2006 Jun 12; 203(6):1551-65. Cannons JL, Yu LJ, Jankovic D, Crotty S, Horai R, Kirby M, Anderson S, Cheever AW, Sher A, Schwartzberg PL. PMID: 16754717; PMCID: PMC2118305.
      View in: PubMed   Mentions: 73     Fields:    Translation:AnimalsCells
    227. Immunity and immunological memory following smallpox vaccination. Immunol Rev. 2006 Jun; 211:320-37. Amanna IJ, Slifka MK, Crotty S. PMID: 16824139.
      View in: PubMed   Mentions: 124     Fields:    Translation:HumansAnimalsCells
    228. Ly9 (CD229)-deficient mice exhibit T cell defects yet do not share several phenotypic characteristics associated with SLAM- and SAP-deficient mice. J Immunol. 2006 Jan 01; 176(1):291-300. Graham DB, Bell MP, McCausland MM, Huntoon CJ, van Deursen J, Faubion WA, Crotty S, McKean DJ. PMID: 16365421.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    229. Vaccinia virus H3L envelope protein is a major target of neutralizing antibodies in humans and elicits protection against lethal challenge in mice. J Virol. 2005 Sep; 79(18):11724-33. Davies DH, McCausland MM, Valdez C, Huynh D, Hernandez JE, Mu Y, Hirst S, Villarreal L, Felgner PL, Crotty S. PMID: 16140750; PMCID: PMC1212608.
      View in: PubMed   Mentions: 126     Fields:    Translation:HumansAnimalsCells
    230. Optimal replication of poliovirus within cells. Am Nat. 2005 Mar; 165(3):364-73. Regoes RR, Crotty S, Antia R, Tanaka MM. PMID: 15729666.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    231. Profiling the humoral immune response to infection by using proteome microarrays: high-throughput vaccine and diagnostic antigen discovery. Proc Natl Acad Sci U S A. 2005 Jan 18; 102(3):547-52. Davies DH, Liang X, Hernandez JE, Randall A, Hirst S, Mu Y, Romero KM, Nguyen TT, Kalantari-Dehaghi M, Crotty S, Baldi P, Villarreal LP, Felgner PL. PMID: 15647345; PMCID: PMC545576.
      View in: PubMed   Mentions: 221     Fields:    Translation:HumansAnimalsCells
    232. Immune responses to Bacillus anthracis protective antigen in patients with bioterrorism-related cutaneous or inhalation anthrax. J Infect Dis. 2004 Oct 01; 190(7):1228-36. Quinn CP, Dull PM, Semenova V, Li H, Crotty S, Taylor TH, Steward-Clark E, Stamey KL, Schmidt DS, Stinson KW, Freeman AE, Elie CM, Martin SK, Greene C, Aubert RD, Glidewell J, Perkins BA, Ahmed R, Stephens DS. PMID: 15346332.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansCells
    233. Immunological memory in humans. Semin Immunol. 2004 Jun; 16(3):197-203. Crotty S, Ahmed R. PMID: 15130504.
      View in: PubMed   Mentions: 92     Fields:    Translation:HumansCellsPHPublic Health
    234. Poliovirus vaccine strains as mucosal vaccine vectors and their potential use to develop an AIDS vaccine. Adv Drug Deliv Rev. 2004 Apr 19; 56(6):835-52. Crotty S, Andino R. PMID: 15063593.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimals
    235. The poliovirus replication machinery can escape inhibition by an antiviral drug that targets a host cell protein. J Virol. 2004 Apr; 78(7):3378-86. Crotty S, Saleh MC, Gitlin L, Beske O, Andino R. PMID: 15016860; PMCID: PMC371039.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    236. Tracking human antigen-specific memory B cells: a sensitive and generalized ELISPOT system. J Immunol Methods. 2004 Mar; 286(1-2):111-22. Crotty S, Aubert RD, Glidewell J, Ahmed R. PMID: 15087226.
      View in: PubMed   Mentions: 233     Fields:    Translation:HumansCells
    237. Cutting edge: long-term B cell memory in humans after smallpox vaccination. J Immunol. 2003 Nov 15; 171(10):4969-73. Crotty S, Felgner P, Davies H, Glidewell J, Villarreal L, Ahmed R. PMID: 14607890.
      View in: PubMed   Mentions: 306     Fields:    Translation:HumansCells
    238. Manganese-dependent polioviruses caused by mutations within the viral polymerase. J Virol. 2003 May; 77(9):5378-88. Crotty S, Gohara D, Gilligan DK, Karelsky S, Cameron CE, Andino R. PMID: 12692240; PMCID: PMC153957.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    239. SAP is required for generating long-term humoral immunity. Nature. 2003 Jan 16; 421(6920):282-7. Crotty S, Kersh EN, Cannons J, Schwartzberg PL, Ahmed R. PMID: 12529646.
      View in: PubMed   Mentions: 180     Fields:    Translation:AnimalsCells
    240. Implications of high RNA virus mutation rates: lethal mutagenesis and the antiviral drug ribavirin. Microbes Infect. 2002 Nov; 4(13):1301-7. Crotty S, Andino R. PMID: 12443894.
      View in: PubMed   Mentions: 43     Fields:    Translation:Cells
    241. Poliovirus pathogenesis in a new poliovirus receptor transgenic mouse model: age-dependent paralysis and a mucosal route of infection. J Gen Virol. 2002 Jul; 83(Pt 7):1707-1720. Crotty S, Hix L, Sigal LJ, Andino R. PMID: 12075090.
      View in: PubMed   Mentions: 39     Fields:    Translation:AnimalsCells
    242. Ribavirin's antiviral mechanism of action: lethal mutagenesis? J Mol Med (Berl). 2002 Feb; 80(2):86-95. Crotty S, Cameron C, Andino R. PMID: 11907645.
      View in: PubMed   Mentions: 83     Fields:    Translation:HumansAnimals
    243. Protection against simian immunodeficiency virus vaginal challenge by using Sabin poliovirus vectors. J Virol. 2001 Aug; 75(16):7435-52. Crotty S, Miller CJ, Lohman BL, Neagu MR, Compton L, Lu D, Lü FX, Fritts L, Lifson JD, Andino R. PMID: 11462016; PMCID: PMC114979.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    244. RNA virus error catastrophe: direct molecular test by using ribavirin. Proc Natl Acad Sci U S A. 2001 Jun 05; 98(12):6895-900. Crotty S, Cameron CE, Andino R. PMID: 11371613; PMCID: PMC34449.
      View in: PubMed   Mentions: 332     Fields:    Translation:HumansCells
    245. The broad-spectrum antiviral ribonucleoside ribavirin is an RNA virus mutagen. Nat Med. 2000 Dec; 6(12):1375-9. Crotty S, Maag D, Arnold JJ, Zhong W, Lau JY, Hong Z, Andino R, Cameron CE. PMID: 11100123.
      View in: PubMed   Mentions: 331     Fields:    Translation:Cells
    246. Poliovirus RNA-dependent RNA polymerase (3Dpol): structural, biochemical, and biological analysis of conserved structural motifs A and B. J Biol Chem. 2000 Aug 18; 275(33):25523-32. Gohara DW, Crotty S, Arnold JJ, Yoder JD, Andino R, Cameron CE. PMID: 10827187.
      View in: PubMed   Mentions: 67     Fields:    Translation:HumansCells
    247. Mucosal immunization of cynomolgus macaques with two serotypes of live poliovirus vectors expressing simian immunodeficiency virus antigens: stimulation of humoral, mucosal, and cellular immunity. J Virol. 1999 Nov; 73(11):9485-95. Crotty S, Lohman BL, Lü FX, Tang S, Miller CJ, Andino R. PMID: 10516057; PMCID: PMC112983.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCellsPHPublic Health
    248. Cytotoxic T-cell immunity to virus-infected non-haematopoietic cells requires presentation of exogenous antigen. Nature. 1999 Mar 04; 398(6722):77-80. Sigal LJ, Crotty S, Andino R, Rock KL. PMID: 10078533.
      View in: PubMed   Mentions: 157     Fields:    Translation:HumansAnimalsCells
    249. Altering the context of an RNA bulge switches the binding specificities of two viral Tat proteins. Biochemistry. 1998 Jul 28; 37(30):10808-14. Smith CA, Crotty S, Harada Y, Frankel AD. PMID: 9692971.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
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