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Satchidananda Panda

TitleAssociate Adjunct Professor
InstitutionUniversity of California San Diego
DepartmentCell and Developmental Biology
Address9500 Gilman Drive #0932
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Sulli G, Manoogian ENC, Taub PR, Panda S. Training the Circadian Clock, Clocking the Drugs, and Drugging the Clock to Prevent, Manage, and Treat Chronic Diseases. Trends Pharmacol Sci. 2018 Jul 27. PMID: 30060890.
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    2. Zarrinpar A, Chaix A, Xu ZZ, Chang MW, Marotz CA, Saghatelian A, Knight R, Panda S. Antibiotic-induced microbiome depletion alters metabolic homeostasis by affecting gut signaling and colonic metabolism. Nat Commun. 2018 Jul 20; 9(1):2872. PMID: 30030441.
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    3. Gabel K, Hoddy KK, Haggerty N, Song J, Kroeger CM, Trepanowski JF, Panda S, Varady KA. Effects of 8-hour time restricted feeding on body weight and metabolic disease risk factors in obese adults: A pilot study. Nutr Healthy Aging. 2018 Jun 15; 4(4):345-353. PMID: 29951594.
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    4. Mure LS, Le HD, Benegiamo G, Chang MW, Rios L, Jillani N, Ngotho M, Kariuki T, Dkhissi-Benyahya O, Cooper HM, Panda S. Diurnal transcriptome atlas of a primate across major neural and peripheral tissues. Science. 2018 03 16; 359(6381). PMID: 29439024.
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    5. Benegiamo G, Mure LS, Erikson G, Le HD, Moriggi E, Brown SA, Panda S. The RNA-Binding Protein NONO Coordinates Hepatic Adaptation to Feeding. Cell Metab. 2018 Feb 06; 27(2):404-418.e7. PMID: 29358041.
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    6. Sulli G, Rommel A, Wang X, Kolar MJ, Puca F, Saghatelian A, Plikus MV, Verma IM, Panda S. Pharmacological activation of REV-ERBs is lethal in cancer and oncogene-induced senescence. Nature. 2018 Jan 18; 553(7688):351-355. PMID: 29320480.
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    7. Lunn RM, Blask DE, Coogan AN, Figueiro MG, Gorman MR, Hall JE, Hansen J, Nelson RJ, Panda S, Smolensky MH, Stevens RG, Turek FW, Vermeulen R, Carreón T, Caruso CC, Lawson CC, Thayer KA, Twery MJ, Ewens AD, Garner SC, Schwingl PJ, Boyd WA. Health consequences of electric lighting practices in the modern world: A report on the National Toxicology Program's workshop on shift work at night, artificial light at night, and circadian disruption. Sci Total Environ. 2017 Dec 31; 607-608:1073-1084. PMID: 28724246.
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    8. Hatori M, Gronfier C, Van Gelder RN, Bernstein PS, Carreras J, Panda S, Marks F, Sliney D, Hunt CE, Hirota T, Furukawa T, Tsubota K. Global rise of potential health hazards caused by blue light-induced circadian disruption in modern aging societies. NPJ Aging Mech Dis. 2017; 3:9. PMID: 28649427.
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    9. Melkani GC, Panda S. Time-restricted feeding for prevention and treatment of cardiometabolic disorders. J Physiol. 2017 Jun 15; 595(12):3691-3700. PMID: 28295377.
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    10. Manoogian ENC, Panda S. Circadian rhythms, time-restricted feeding, and healthy aging. Ageing Res Rev. 2017 Oct; 39:59-67. PMID: 28017879.
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    11. Kofuji P, Mure LS, Massman LJ, Purrier N, Panda S, Engeland WC. Intrinsically Photosensitive Retinal Ganglion Cells (ipRGCs) Are Necessary for Light Entrainment of Peripheral Clocks. PLoS One. 2016; 11(12):e0168651. PMID: 27992553.
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    12. Panda S. Circadian physiology of metabolism. Science. 2016 11 25; 354(6315):1008-1015. PMID: 27885007.
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    13. Chaix A, Zarrinpar A, Panda S. The circadian coordination of cell biology. J Cell Biol. 2016 Oct 10; 215(1):15-25. PMID: 27738003.
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    14. Longo VD, Panda S. Fasting, Circadian Rhythms, and Time-Restricted Feeding in Healthy Lifespan. Cell Metab. 2016 Jun 14; 23(6):1048-1059. PMID: 27304506.
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    15. Mure LS, Hatori M, Zhu Q, Demas J, Kim IM, Nayak SK, Panda S. Melanopsin-Encoded Response Properties of Intrinsically Photosensitive Retinal Ganglion Cells. Neuron. 2016 06 01; 90(5):1016-27. PMID: 27181062; PMCID: PMC4891235 [Available on 06/01/17].
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    16. Chaix A, Panda S. Ketone Bodies Signal Opportunistic Food-Seeking Activity. Trends Endocrinol Metab. 2016 06; 27(6):350-352. PMID: 27038664.
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    17. Manoogian EN, Panda S. Circadian clock, nutrient quality, and eating pattern tune diurnal rhythms in the mitochondrial proteome. Proc Natl Acad Sci U S A. 2016 Mar 22; 113(12):3127-9. PMID: 26979954; PMCID: PMC4812772 [Available on 09/22/16].
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    18. Zarrinpar A, Chaix A, Panda S. Daily Eating Patterns and Their Impact on Health and Disease. Trends Endocrinol Metab. 2016 Feb; 27(2):69-83. PMID: 26706567.
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    19. Arble DM, Bass J, Behn CD, Butler MP, Challet E, Czeisler C, Depner CM, Elmquist J, Franken P, Grandner MA, Hanlon EC, Keene AC, Joyner MJ, Karatsoreos I, Kern PA, Klein S, Morris CJ, Pack AI, Panda S, Ptacek LJ, Punjabi NM, Sassone-Corsi P, Scheer FA, Saxena R, Seaquest ER, Thimgan MS, Van Cauter E, Wright KP. Impact of Sleep and Circadian Disruption on Energy Balance and Diabetes: A Summary of Workshop Discussions. Sleep. 2015 Dec 01; 38(12):1849-60. PMID: 26564131; PMCID: PMC4667373.
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    20. Gill S, Panda S. A Smartphone App Reveals Erratic Diurnal Eating Patterns in Humans that Can Be Modulated for Health Benefits. Cell Metab. 2015 Nov 03; 22(5):789-98. PMID: 26411343; PMCID: PMC4635036 [Available on 11/03/16].
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    21. Singh D, Trivedi AK, Rani S, Panda S, Kumar V. Circadian timing in central and peripheral tissues in a migratory songbird: dependence on annual life-history states. FASEB J. 2015 Oct; 29(10):4248-55. PMID: 26103987.
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    22. Gill S, Le HD, Melkani GC, Panda S. Time-restricted feeding attenuates age-related cardiac decline in Drosophila. Science. 2015 Mar 13; 347(6227):1265-9. PMID: 25766238; PMCID: PMC4578815.
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    23. Hatori M, Panda S. Response of peripheral rhythms to the timing of food intake. Methods Enzymol. 2015; 552:145-61. PMID: 25707276.
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    24. Zarrinpar A, Chaix A, Yooseph S, Panda S. Diet and feeding pattern affect the diurnal dynamics of the gut microbiome. Cell Metab. 2014 Dec 02; 20(6):1006-17. PMID: 25470548; PMCID: PMC4255146.
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    25. Chaix A, Zarrinpar A, Miu P, Panda S. Time-restricted feeding is a preventative and therapeutic intervention against diverse nutritional challenges. Cell Metab. 2014 Dec 02; 20(6):991-1005. PMID: 25470547; PMCID: PMC4255155.
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    26. Mattson MP, Allison DB, Fontana L, Harvie M, Longo VD, Malaisse WJ, Mosley M, Notterpek L, Ravussin E, Scheer FA, Seyfried TN, Varady KA, Panda S. Meal frequency and timing in health and disease. Proc Natl Acad Sci U S A. 2014 Nov 25; 111(47):16647-53. PMID: 25404320; PMCID: PMC4250148.
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    27. Bushong EA, Johnson DD, Kim KY, Terada M, Hatori M, Peltier ST, Panda S, Merkle A, Ellisman MH. X-ray microscopy as an approach to increasing accuracy and efficiency of serial block-face imaging for correlated light and electron microscopy of biological specimens. Microsc Microanal. 2015 Feb; 21(1):231-8. PMID: 25392009; PMCID: PMC4415271.
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    28. Perez AJ, Seyedhosseini M, Deerinck TJ, Bushong EA, Panda S, Tasdizen T, Ellisman MH. A workflow for the automatic segmentation of organelles in electron microscopy image stacks. Front Neuroanat. 2014; 8:126. PMID: 25426032; PMCID: PMC4224098.
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    29. Pieraut S, Gounko N, Sando R, Dang W, Rebboah E, Panda S, Madisen L, Zeng H, Maximov A. Experience-dependent remodeling of basket cell networks in the dentate gyrus. Neuron. 2014 Oct 01; 84(1):107-122. PMID: 25277456; PMCID: PMC4197970.
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    30. Hatori M, Gill S, Mure LS, Goulding M, O'Leary DD, Panda S. Lhx1 maintains synchrony among circadian oscillator neurons of the SCN. Elife. 2014 Jul 17; 3:e03357. PMID: 25035422; PMCID: PMC4137275.
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    31. Liu Z, Huang M, Wu X, Shi G, Xing L, Dong Z, Qu Z, Yan J, Yang L, Panda S, Xu Y. PER1 phosphorylation specifies feeding rhythm in mice. Cell Rep. 2014 Jun 12; 7(5):1509-1520. PMID: 24857656.
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    32. Hatori M, Panda S. Nucleosome dynamics regulate Neurospora circadian clock. EMBO Rep. 2013 Oct; 14(10):854-5. PMID: 24030278; PMCID: PMC3807225.
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    33. Jones KA, Hatori M, Mure LS, Bramley JR, Artymyshyn R, Hong SP, Marzabadi M, Zhong H, Sprouse J, Zhu Q, Hartwick AT, Sollars PJ, Pickard GE, Panda S. Small-molecule antagonists of melanopsin-mediated phototransduction. Nat Chem Biol. 2013 Oct; 9(10):630-5. PMID: 23974117.
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    34. Hardin PE, Panda S. Circadian timekeeping and output mechanisms in animals. Curr Opin Neurobiol. 2013 Oct; 23(5):724-31. PMID: 23731779; PMCID: PMC3973145.
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    35. Plikus MV, Vollmers C, de la Cruz D, Chaix A, Ramos R, Panda S, Chuong CM. Local circadian clock gates cell cycle progression of transient amplifying cells during regenerative hair cycling. Proc Natl Acad Sci U S A. 2013 Jun 04; 110(23):E2106-15. PMID: 23690597; PMCID: PMC3677499.
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    36. Clark DD, Gorman MR, Hatori M, Meadows JD, Panda S, Mellon PL. Aberrant development of the suprachiasmatic nucleus and circadian rhythms in mice lacking the homeodomain protein Six6. J Biol Rhythms. 2013 Feb; 28(1):15-25. PMID: 23382588; PMCID: PMC3586279.
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    37. Vollmers C, Schmitz RJ, Nathanson J, Yeo G, Ecker JR, Panda S. Circadian oscillations of protein-coding and regulatory RNAs in a highly dynamic mammalian liver epigenome. Cell Metab. 2012 Dec 05; 16(6):833-45. PMID: 23217262; PMCID: PMC3541940.
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    38. Mure LS, Panda S. Fear of the light or need for action: the IGL will judge. Neuron. 2012 Aug 23; 75(4):546-8. PMID: 22920246.
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    39. Narasimamurthy R, Hatori M, Nayak SK, Liu F, Panda S, Verma IM. Circadian clock protein cryptochrome regulates the expression of proinflammatory cytokines. Proc Natl Acad Sci U S A. 2012 Jul 31; 109(31):12662-7. PMID: 22778400; PMCID: PMC3411996.
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    40. Hatori M, Vollmers C, Zarrinpar A, DiTacchio L, Bushong EA, Gill S, Leblanc M, Chaix A, Joens M, Fitzpatrick JA, Ellisman MH, Panda S. Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet. Cell Metab. 2012 Jun 06; 15(6):848-60. PMID: 22608008; PMCID: PMC3491655.
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    41. Cho H, Zhao X, Hatori M, Yu RT, Barish GD, Lam MT, Chong LW, DiTacchio L, Atkins AR, Glass CK, Liddle C, Auwerx J, Downes M, Panda S, Evans RM. Regulation of circadian behaviour and metabolism by REV-ERB-a and REV-ERB-ß. Nature. 2012 Mar 29; 485(7396):123-7. PMID: 22460952; PMCID: PMC3367514.
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    42. DiTacchio L, Le HD, Vollmers C, Hatori M, Witcher M, Secombe J, Panda S. Histone lysine demethylase JARID1a activates CLOCK-BMAL1 and influences the circadian clock. Science. 2011 Sep 30; 333(6051):1881-5. PMID: 21960634; PMCID: PMC3204309.
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    43. Ma D, Panda S, Lin JD. Temporal orchestration of circadian autophagy rhythm by C/EBPß. EMBO J. 2011 Sep 06; 30(22):4642-51. PMID: 21897364; PMCID: PMC3243590.
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    44. Gill S, Panda S. Feeding mistiming decreases reproductive fitness in flies. Cell Metab. 2011 Jun 08; 13(6):613-4. PMID: 21641540; PMCID: PMC3142915.
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    45. Brown TM, Gias C, Hatori M, Keding SR, Semo M, Coffey PJ, Gigg J, Piggins HD, Panda S, Lucas RJ. Melanopsin contributions to irradiance coding in the thalamo-cortical visual system. PLoS Biol. 2010 Dec 07; 8(12):e1000558. PMID: 21151887; PMCID: PMC2998442.
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    46. Jones MA, Covington MF, DiTacchio L, Vollmers C, Panda S, Harmer SL. Jumonji domain protein JMJD5 functions in both the plant and human circadian systems. Proc Natl Acad Sci U S A. 2010 Dec 14; 107(50):21623-8. PMID: 21115819; PMCID: PMC3003042.
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    47. Hatori M, Panda S. CRY links the circadian clock and CREB-mediated gluconeogenesis. Cell Res. 2010 Dec; 20(12):1285-8. PMID: 21124321.
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    48. Hatori M, Panda S. The emerging roles of melanopsin in behavioral adaptation to light. Trends Mol Med. 2010 Oct; 16(10):435-46. PMID: 20810319; PMCID: PMC2952704.
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    49. Vollmers C, Gill S, DiTacchio L, Pulivarthy SR, Le HD, Panda S. Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression. Proc Natl Acad Sci U S A. 2009 Dec 15; 106(50):21453-8. PMID: 19940241; PMCID: PMC2795502.
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    50. Lamia KA, Sachdeva UM, DiTacchio L, Williams EC, Alvarez JG, Egan DF, Vasquez DS, Juguilon H, Panda S, Shaw RJ, Thompson CB, Evans RM. AMPK regulates the circadian clock by cryptochrome phosphorylation and degradation. Science. 2009 Oct 16; 326(5951):437-40. PMID: 19833968; PMCID: PMC2819106.
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    51. Hughes ME, DiTacchio L, Hayes KR, Vollmers C, Pulivarthy S, Baggs JE, Panda S, Hogenesch JB. Harmonics of circadian gene transcription in mammals. PLoS Genet. 2009 Apr; 5(4):e1000442. PMID: 19343201; PMCID: PMC2654964.
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    52. Baggs JE, Price TS, DiTacchio L, Panda S, Fitzgerald GA, Hogenesch JB. Network features of the mammalian circadian clock. PLoS Biol. 2009 Mar 10; 7(3):e52. PMID: 19278294; PMCID: PMC2653556.
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    53. Vollmers C, Panda S, DiTacchio L. A high-throughput assay for siRNA-based circadian screens in human U2OS cells. PLoS One. 2008; 3(10):e3457. PMID: 18941634; PMCID: PMC2565498.
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    54. Hatori M, Le H, Vollmers C, Keding SR, Tanaka N, Buch T, Waisman A, Schmedt C, Jegla T, Panda S. Inducible ablation of melanopsin-expressing retinal ganglion cells reveals their central role in non-image forming visual responses. PLoS One. 2008 Jun 11; 3(6):e2451. PMID: 18545654; PMCID: PMC2396502.
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    55. Pulivarthy SR, Tanaka N, Welsh DK, De Haro L, Verma IM, Panda S. Reciprocity between phase shifts and amplitude changes in the mammalian circadian clock. Proc Natl Acad Sci U S A. 2007 Dec 18; 104(51):20356-61. PMID: 18077393; PMCID: PMC2154435.
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    56. Miller BH, McDearmon EL, Panda S, Hayes KR, Zhang J, Andrews JL, Antoch MP, Walker JR, Esser KA, Hogenesch JB, Takahashi JS. Circadian and CLOCK-controlled regulation of the mouse transcriptome and cell proliferation. Proc Natl Acad Sci U S A. 2007 Feb 27; 104(9):3342-7. PMID: 17360649; PMCID: PMC1802006.
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    57. De Haro L, Panda S. Systems biology of circadian rhythms: an outlook. J Biol Rhythms. 2006 Dec; 21(6):507-18. PMID: 17107940.
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    58. Rudic RD, McNamara P, Reilly D, Grosser T, Curtis AM, Price TS, Panda S, Hogenesch JB, FitzGerald GA. Bioinformatic analysis of circadian gene oscillation in mouse aorta. Circulation. 2005 Oct 25; 112(17):2716-24. PMID: 16230482.
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    59. Panda S, Nayak SK, Campo B, Walker JR, Hogenesch JB, Jegla T. Illumination of the melanopsin signaling pathway. Science. 2005 Jan 28; 307(5709):600-4. PMID: 15681390.
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    60. Rudic RD, McNamara P, Curtis AM, Boston RC, Panda S, Hogenesch JB, Fitzgerald GA. BMAL1 and CLOCK, two essential components of the circadian clock, are involved in glucose homeostasis. PLoS Biol. 2004 Nov; 2(11):e377. PMID: 15523558; PMCID: PMC524471.
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    61. Panda S, Hogenesch JB. It's all in the timing: many clocks, many outputs. J Biol Rhythms. 2004 Oct; 19(5):374-87. PMID: 15534318.
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    62. Sato TK, Panda S, Miraglia LJ, Reyes TM, Rudic RD, McNamara P, Naik KA, FitzGerald GA, Kay SA, Hogenesch JB. A functional genomics strategy reveals Rora as a component of the mammalian circadian clock. Neuron. 2004 Aug 19; 43(4):527-37. PMID: 15312651.
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    63. Grechez-Cassiau A, Panda S, Lacoche S, Teboul M, Azmi S, Laudet V, Hogenesch JB, Taneja R, Delaunay F. The transcriptional repressor STRA13 regulates a subset of peripheral circadian outputs. J Biol Chem. 2004 Jan 09; 279(2):1141-50. PMID: 14581485.
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    64. Panda S, Provencio I, Tu DC, Pires SS, Rollag MD, Castrucci AM, Pletcher MT, Sato TK, Wiltshire T, Andahazy M, Kay SA, Van Gelder RN, Hogenesch JB. Melanopsin is required for non-image-forming photic responses in blind mice. Science. 2003 Jul 25; 301(5632):525-7. PMID: 12829787.
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    65. Sato TK, Panda S, Kay SA, Hogenesch JB. DNA arrays: applications and implications for circadian biology. J Biol Rhythms. 2003 Apr; 18(2):96-105. PMID: 12693865.
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    66. Panda S, Sato TK, Hampton GM, Hogenesch JB. An array of insights: application of DNA chip technology in the study of cell biology. Trends Cell Biol. 2003 Mar; 13(3):151-6. PMID: 12628348.
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    67. Panda S, Hogenesch JB, Kay SA. Circadian light input in plants, flies and mammals. Novartis Found Symp. 2003; 253:73-82; discussion 82-8, 102-9, 281-4. PMID: 14712915.
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    68. Hogenesch JB, Panda S, Kay S, Takahashi JS. Circadian transcriptional output in the SCN and liver of the mouse. Novartis Found Symp. 2003; 253:171-80; discussion 52-5, 102-9, 180-3 passim. PMID: 14712921.
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    69. Panda S, Sato TK, Castrucci AM, Rollag MD, DeGrip WJ, Hogenesch JB, Provencio I, Kay SA. Melanopsin (Opn4) requirement for normal light-induced circadian phase shifting. Science. 2002 Dec 13; 298(5601):2213-6. PMID: 12481141.
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    70. Ceriani MF, Hogenesch JB, Yanovsky M, Panda S, Straume M, Kay SA. Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior. J Neurosci. 2002 Nov 01; 22(21):9305-19. PMID: 12417656.
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    71. Panda S, Poirier GG, Kay SA. tej defines a role for poly(ADP-ribosyl)ation in establishing period length of the arabidopsis circadian oscillator. Dev Cell. 2002 Jul; 3(1):51-61. PMID: 12110167.
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    72. Panda S, Hogenesch JB, Kay SA. Circadian rhythms from flies to human. Nature. 2002 May 16; 417(6886):329-35. PMID: 12015613.
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    73. Panda S, Antoch MP, Miller BH, Su AI, Schook AB, Straume M, Schultz PG, Kay SA, Takahashi JS, Hogenesch JB. Coordinated transcription of key pathways in the mouse by the circadian clock. Cell. 2002 May 03; 109(3):307-20. PMID: 12015981.
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