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    Ross Walker

    TitleAssociate Adjunct Professor
    SchoolUniversity of California, San Diego
    DepartmentChemistry and Biochemistry
    Address9500 Gilman Drive #0505
    CA La Jolla 92093
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      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Palermo G, Miao Y, Walker R, Jinek M, McCammon JA. CRISPR-Cas9 conformational activation as elucidated from enhanced molecular simulations. Proc Natl Acad Sci U S A. 2017 Jul 11; 114(28):7260-7265. PMID: 28652374.
        View in: PubMed
      2. Palermo G, Miao Y, Walker R, Jinek M, McCammon JA. Striking Plasticity of CRISPR-Cas9 and Key Role of Non-target DNA, as Revealed by Molecular Simulations. ACS Cent Sci. 2016 Oct 26; 2(10):756-763. PMID: 27800559.
        View in: PubMed
      3. Ramsey S, Nguyen C, Salomon-Ferrer R, Walker R, Gilson MK, Kurtzman T. Solvation thermodynamic mapping of molecular surfaces in AmberTools: GIST. J Comput Chem. 2016 Aug 5; 37(21):2029-37. PMID: 27317094.
        View in: PubMed
      4. Miao Y, Sinko W, Pierce L, Bucher D, Walker R, McCammon JA. Improved Reweighting of Accelerated Molecular Dynamics Simulations for Free Energy Calculation. J Chem Theory Comput. 2014 Jul 8; 10(7):2677-2689. PMID: 25061441.
        View in: PubMed
      5. Barkho S, Pierce LC, McGlone ML, Li S, Woods VL, Walker R, Adams JA, Jennings PA. Distal loop flexibility of a regulatory domain modulates dynamics and activity of C-terminal SRC kinase (csk). PLoS Comput Biol. 2013; 9(9):e1003188. PMID: 24039559.
        View in: PubMed
      6. Bastidas AC, Pierce LC, Walker R, Johnson DA, Taylor SS. Influence of N-myristylation and ligand binding on the flexibility of the catalytic subunit of protein kinase A. Biochemistry. 2013 Sep 17; 52(37):6368-79. PMID: 24003983.
        View in: PubMed
      7. Pierce LC, Salomon-Ferrer R, Augusto F de Oliveira C, McCammon JA, Walker R. Routine Access to Millisecond Time Scale Events with Accelerated Molecular Dynamics. J Chem Theory Comput. 2012 Sep 11; 8(9):2997-3002. PMID: 22984356.
        View in: PubMed
      8. Park K, Götz AW, Walker R, Paesani F. Application of Adaptive QM/MM Methods to Molecular Dynamics Simulations of Aqueous Systems. J Chem Theory Comput. 2012 Aug 14; 8(8):2868-77. PMID: 26592126.
        View in: PubMed
      9. Votapka L, Demir O, Swift RV, Walker R, Amaro RE. Variable ligand- and receptor-binding hot spots in key strains of influenza neuraminidase. J Mol Genet Med. 2012; 6:293-300. PMID: 22872804.
        View in: PubMed
      10. Amaro RE, Swift RV, Votapka L, Li WW, Walker R, Bush RM. Mechanism of 150-cavity formation in influenza neuraminidase. Nat Commun. 2011; 2:388. PMID: 21750542.
        View in: PubMed