Richard Ainsworth

Title(s)Assistant Project Scientist, Chemistry and Biochemistry
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    1. Engineering a Histone Reader Protein by Combining Directed Evolution, Sequencing, and Neural Network Based Ordinal Regression. J Chem Inf Model. 2020 08 24; 60(8):3992-4004. Parkinson J, Hard R, Ainsworth RI, Li N, Wang W. PMID: 32786513.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    2. Bayesian Networks Predict Neuronal Transdifferentiation. G3 (Bethesda). 2018 07 02; 8(7):2501-2511. Ainsworth RI, Ai R, Ding B, Li N, Zhang K, Wang W. PMID: 29848620.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    3. Comprehensive epigenetic landscape of rheumatoid arthritis fibroblast-like synoviocytes. Nat Commun. 2018 05 15; 9(1):1921. Ai R, Laragione T, Hammaker D, Boyle DL, Wildberg A, Maeshima K, Palescandolo E, Krishna V, Pocalyko D, Whitaker JW, Bai Y, Nagpal S, Bachman KE, Ainsworth RI, Wang M, Ding B, Gulko PS, Wang W, Firestein GS. PMID: 29765031.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    4. Structures and properties of phosphate-based bioactive glasses from computer simulation: a review. J Mater Chem B. 2017 Jul 21; 5(27):5297-5306. Christie JK, Ainsworth RI, Hernandez SER, de Leeuw NH. PMID: 32264067.
      View in: PubMed   Mentions:    Fields:    
    5. Structures and properties of phosphate-based bioactive glasses from computer simulation: a review. J Mat Chem B. 2017. Christie JK, Ainsworth R, Hernandez SR, de Leeuw NH. View Publication.
    6. Molecular dynamics simulations of bio-active phosphate-based glass surfaces. J Non-Cryst. Solids. 2016; 451:131-137. Hernandez SR, Ainsworth R, de Leeuw NH. View Publication.
    7. Systematic identification of protein combinations mediating chromatin looping. Nat Commun. 2016 07 27; 7:12249. Zhang K, Li N, Ainsworth RI, Wang W. PMID: 27461729.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    8. Investigating structural features which control the dissolution of bioactive phosphate glasses: Beyond the network connectivity. J Non-Cryst. Solids. 2016; 432 Part A:31-34. Christie JK, Ainsworth R, de Leeuw NH. View Publication.
    9. MIEC-SVM: automated pipeline for protein peptide/ligand interaction prediction. Bioinformatics. 2016 03 15; 32(6):940-2. Li N, Ainsworth RI, Wu M, Ding B, Wang W. PMID: 26568623.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    10. Using Hierarchical Virtual Screening To Combat Drug Resistance of the HIV-1 Protease. J Chem Inf Model. 2015 Jul 27; 55(7):1400-12. Li N, Ainsworth RI, Ding B, Hou T, Wang W. PMID: 25993532.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    11. On the structure of biomedical silver-doped phosphate-based glasses from molecular dynamics simulations. Phys Chem Chem Phys. 2014 Oct 21; 16(39):21135-43. Ainsworth RI, Christie JK, de Leeuw NH. PMID: 25069608.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    12. Ab initio molecular dynamics simulations of structural changes associated with the incorporation of fluorine in bioactive phosphate glasses. Biomaterials. 2014 Aug; 35(24):6164-71. Christie JK, Ainsworth RI, de Leeuw NH. PMID: 24802671.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    13. Nanoscale chains control the solubility of phosphate glasses for biomedical applications. J Phys Chem B. 2013 Sep 12; 117(36):10652-7. Christie JK, Ainsworth RI, Di Tommaso D, de Leeuw NH. PMID: 23947716.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    14. Modelling the structural evolution of ternary phosphate glasses from melts to solid amorphous materials. J Mater Chem B. 2013 Oct 14; 1(38):5054-5066. Di Tommaso D, Ainsworth RI, Tang E, de Leeuw NH. PMID: 32261096.
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    15. Modelling the structural evolution of ternary phosphate glasses from melts to solid amorphous materials. J Mat Chem B. 2013; 1(38):5054-5066 . Di Tommaso D, Ainsworth R, Tang E, de Leeuw NH. View Publication.
    16. Polarizable force field development and molecular dynamics study of phosphate-based glasses. J Chem Phys. 2012 Dec 21; 137(23):234502. Ainsworth RI, Di Tommaso D, Christie JK, de Leeuw NH. PMID: 23267491.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    17. A density functional theory study of structural, mechanical and electronic properties of crystalline phosphorus pentoxide. J Chem Phys. 2011 Dec 21; 135(23):234513. Ainsworth RI, Di Tommaso D, de Leeuw NH. PMID: 22191892.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
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