Richard Ainsworth

TitlePostdoctoral Scholar
InstitutionUniversity of California San Diego
DepartmentChemistry and Biochemistry
Address9500 Gilman Drive #0359
La Jolla CA 92093
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    1. Ainsworth R, Ai R, Ding B, Li N, Zhang K, Wang W. Bayesian Networks Predict Neuronal Transdifferentiation. G3 (Bethesda). 2018 May 30. PMID: 29848620.
      View in: PubMed
    2. Ai R, Laragione T, Hammaker D, Boyle DL, Wildberg A, Maeshima K, Palescandolo E, Krishna V, Pocalyko D, Whitaker JW, Bai Y, Nagpal S, Bachman KE, Ainsworth R, Wang M, Ding B, Gulko PS, Wang W, Firestein GS. Comprehensive epigenetic landscape of rheumatoid arthritis fibroblast-like synoviocytes. Nat Commun. 2018 May 15; 9(1):1921. PMID: 29765031.
      View in: PubMed
    3. Christie JK, Ainsworth R, Hernandez SR, de Leeuw NH.Structures and properties of phosphate-based bioactive glasses from computer simulation: a review. J Mat Chem B. 2017.
    4. Hernandez SR, Ainsworth R, de Leeuw NH.Molecular dynamics simulations of bio-active phosphate-based glass surfaces. J Non-Cryst. Solids. 2016; 451:131-137.
    5. Zhang K, Li N, Ainsworth R, Wang W. Systematic identification of protein combinations mediating chromatin looping. Nat Commun. 2016 Jul 27; 7:12249. PMID: 27461729; PMCID: PMC4974460.
    6. Christie JK, Ainsworth R, de Leeuw NH.Investigating structural features which control the dissolution of bioactive phosphate glasses: Beyond the network connectivity. J Non-Cryst. Solids. 2016; 432 Part A:31-34.
    7. Li N, Ainsworth R, Wu M, Ding B, Wang W. MIEC-SVM: automated pipeline for protein peptide/ligand interaction prediction. Bioinformatics. 2016 03 15; 32(6):940-2. PMID: 26568623; PMCID: PMC4907390 [Available on 03/15/17].
    8. Li N, Ainsworth R, Ding B, Hou T, Wang W. Using Hierarchical Virtual Screening To Combat Drug Resistance of the HIV-1 Protease. J Chem Inf Model. 2015 Jul 27; 55(7):1400-12. PMID: 25993532.
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    9. Ainsworth R, Christie JK, de Leeuw NH. On the structure of biomedical silver-doped phosphate-based glasses from molecular dynamics simulations. Phys Chem Chem Phys. 2014 Oct 21; 16(39):21135-43. PMID: 25069608.
      View in: PubMed
    10. Christie JK, Ainsworth R, de Leeuw NH. Ab initio molecular dynamics simulations of structural changes associated with the incorporation of fluorine in bioactive phosphate glasses. Biomaterials. 2014 Aug; 35(24):6164-71. PMID: 24802671.
      View in: PubMed
    11. Christie JK, Ainsworth R, Di Tommaso D, de Leeuw NH. Nanoscale chains control the solubility of phosphate glasses for biomedical applications. J Phys Chem B. 2013 Sep 12; 117(36):10652-7. PMID: 23947716.
      View in: PubMed
    12. Di Tommaso D, Ainsworth R, Tang E, de Leeuw NH.Modelling the structural evolution of ternary phosphate glasses from melts to solid amorphous materials. J Mat Chem B. 2013; 1(38):5054-5066 .
    13. Ainsworth R, Di Tommaso D, Christie JK, de Leeuw NH. Polarizable force field development and molecular dynamics study of phosphate-based glasses. J Chem Phys. 2012 Dec 21; 137(23):234502. PMID: 23267491.
      View in: PubMed
    14. Ainsworth R, Di Tommaso D, de Leeuw NH. A density functional theory study of structural, mechanical and electronic properties of crystalline phosphorus pentoxide. J Chem Phys. 2011 Dec 21; 135(23):234513. PMID: 22191892.
      View in: PubMed
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