Naoki Kubo

Title(s)Postdoctoral Scholar, Cellular and Molecular Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Paired genetic analysis by next-generation sequencing of lung cancer and associated idiopathic pulmonary fibrosis. Cancer Sci. 2020 Jul; 111(7):2482-2487. Otsubo K, Iwama E, Ijichi K, Kubo N, Yoneshima Y, Inoue H, Tanaka K, Osoegawa A, Tagawa T, Nakanishi Y, Okamoto I. PMID: 32426915.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    2. CTCF mediates chromatin looping via N-terminal domain-dependent cohesin retention. Proc Natl Acad Sci U S A. 2020 01 28; 117(4):2020-2031. Pugacheva EM, Kubo N, Loukinov D, Tajmul M, Kang S, Kovalchuk AL, Strunnikov AV, Zentner GE, Ren B, Lobanenkov VV. PMID: 31937660.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    3. Joint profiling of DNA methylation and chromatin architecture in single cells. Nat Methods. 2019 10; 16(10):991-993. Li G, Liu Y, Zhang Y, Kubo N, Yu M, Fang R, Kellis M, Ren B. PMID: 31384045.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    4. Identification of Genomic Alterations Acquired During Treatment With EGFR-TKIs in Non-small Cell Lung Cancer. Anticancer Res. 2019 Feb; 39(2):671-677. Kubo N, Harada T, Shiraishi Y, Nosaki K, Nakagaki N, Takeshita M, Ouchi H, Iwama E, Tanaka K, Okamoto I, Sasaki H, Nakanishi Y. PMID: 30711944.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    5. A case of laparoscopic high anterior resection of rectosigmoid colon cancer associated with a horseshoe kidney using preoperative 3D-CT angiography. Surg Case Rep. 2018 Jun 27; 4(1):66. Kubo N, Furusawa N, Imai S, Terada M. PMID: 29946927.
      View in: PubMed   Mentions:
    6. Solitary metastasis to a superior mediastinal lymph node after distal gastrectomy for gastric cancer: a case report. BMC Cancer. 2018 Jun 04; 18(1):627. Kubo N, Yoshizawa J, Hanaoka T. PMID: 29866101.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    7. Polycomb protein SCML2 facilitates H3K27me3 to establish bivalent domains in the male germline. Proc Natl Acad Sci U S A. 2018 05 08; 115(19):4957-4962. Maezawa S, Hasegawa K, Yukawa M, Kubo N, Sakashita A, Alavattam KG, Sin HS, Kartashov AV, Sasaki H, Barski A, Namekawa SH. PMID: 29686098.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    8. Intrinsic and Extrinsic Regulation of PD-L2 Expression in Oncogene-Driven Non-Small Cell Lung Cancer. J Thorac Oncol. 2018 07; 13(7):926-937. Shibahara D, Tanaka K, Iwama E, Kubo N, Ota K, Azuma K, Harada T, Fujita J, Nakanishi Y, Okamoto I. PMID: 29596910.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    9. Proton-Driven Intercalation and Ion Substitution Utilizing Solid-State Electrochemical Reaction. J Am Chem Soc. 2017 12 13; 139(49):17987-17993. Fujioka M, Wu C, Kubo N, Zhao G, Inoishi A, Okada S, Demura S, Sakata H, Ishimaru M, Kaiju H, Nishii J. PMID: 29144128.
      View in: PubMed   Mentions:    Fields:    
    10. Dual Isotope SPECT Study With Epilepsy Patients Using Semiconductor SPECT System. Clin Nucl Med. 2017 Sep; 42(9):663-668. Shiga T, Suzuki A, Sakurai K, Kurita T, Takeuchi W, Toyonaga T, Hirata K, Kobashi K, Katoh C, Kubo N, Tamaki N. PMID: 28682842.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    11. Curative resection by splenectomy for solitary splenic metastasis from early gastric cancer: a case report and literature review. BMC Cancer. 2017 Jun 20; 17(1):436. Yoshizawa J, Kubo N, Ishizone S, Karasawa F, Nakayama A. PMID: 28637437.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    12. Gastrointestinal stromal tumor of the stomach with axillary lymph node metastasis: A case report. World J Gastroenterol. 2017 Mar 07; 23(9):1720-1724. Kubo N, Takeuchi N. PMID: 28321172.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    13. Most T790M mutations are present on the same EGFR allele as activating mutations in patients with non-small cell lung cancer. Lung Cancer. 2017 06; 108:75-82. Hidaka N, Iwama E, Kubo N, Harada T, Miyawaki K, Tanaka K, Okamoto I, Baba E, Akashi K, Sasaki H, Nakanishi Y. PMID: 28625653.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    14. Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing. BMC Genomics. 2017 01 05; 18(1):31. Toh H, Shirane K, Miura F, Kubo N, Ichiyanagi K, Hayashi K, Saitou M, Suyama M, Ito T, Sasaki H. PMID: 28056787.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    15. Dynamic PET evaluation of elevated FLT level after sorafenib treatment in mice bearing human renal cell carcinoma xenograft. EJNMMI Res. 2016 Dec; 6(1):90. Ukon N, Zhao S, Yu W, Shimizu Y, Nishijima KI, Kubo N, Kitagawa Y, Tamaki N, Higashikawa K, Yasui H, Kuge Y. PMID: 27957722.
      View in: PubMed   Mentions:
    16. Simultaneous Tc-99m and I-123 dual-radionuclide imaging with a solid-state detector-based brain-SPECT system and energy-based scatter correction. EJNMMI Phys. 2016 Dec; 3(1):10. Takeuchi W, Suzuki A, Shiga T, Kubo N, Morimoto Y, Ueno Y, Kobashi K, Umegaki K, Tamaki N. PMID: 27357946.
      View in: PubMed   Mentions:
    17. A case of a perforated obturator hernia with a femoral abscess treated a pectineus muscle flap. BMC Surg. 2015 Oct 02; 15:107. Kubo N, Yoshizawa Z, Hanaoka T, Nakamura K. PMID: 26432071.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    18. DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis. BMC Genomics. 2015 Aug 20; 16:624. Kubo N, Toh H, Shirane K, Shirakawa T, Kobayashi H, Sato T, Sone H, Sato Y, Tomizawa S, Tsurusaki Y, Shibata H, Saitsu H, Suzuki Y, Matsumoto N, Suyama M, Kono T, Ohbo K, Sasaki H. PMID: 26290333.
      View in: PubMed   Mentions: 32     Fields:    Translation:AnimalsCells
    19. Irbesartan attenuates atherosclerosis in Watanabe heritable hyperlipidemic rabbits: noninvasive imaging of inflammation by 18F-fluorodeoxyglucose positron emission tomography. Mol Imaging. 2015; 14. Zhao Y, Fukao K, Zhao S, Watanabe A, Hamada T, Yamasaki K, Shimizu Y, Kubo N, Ukon N, Nakano T, Tamaki N, Kuge Y. PMID: 25812568.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    20. Evaluation of delineation of image details in semiconductor PET utilizing the normalized mutual information technique. Nucl Med Commun. 2014 Jun; 35(6):677-82. Kubo N, Hirata K, Matsuzaki K, Morimoto Y, Takeuchi W, Hattori N, Shiga T, Kuge Y, Tamaki N. PMID: 24681765.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    21. Interstitial pneumonia during bevacizumab-based chemotherapy for colorectal cancer. Med Oncol. 2014 Mar; 31(3):856. Tamura S, Kusaba H, Kubo N, Ijichi K, Tsuchihashi K, Komoda M, Uchino K, Ariyama H, Akashi K, Baba E. PMID: 24477650.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    22. High-sensitivity brain SPECT system using cadmium telluride (CdTe) semiconductor detector and 4-pixel matched collimator. Phys Med Biol. 2013 Nov 07; 58(21):7715-31. Suzuki A, Takeuchi W, Ishitsu T, Tsuchiya K, Morimoto Y, Ueno Y, Kobashi K, Kubo N, Shiga T, Tamaki N. PMID: 24140804.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    23. 123I-iomazenil single photon emission computed tomography visualizes recovery of neuronal integrity by bone marrow stromal cell therapy in rat infarct brain. Stroke. 2013 Oct; 44(10):2869-74. Saito H, Magota K, Zhao S, Kubo N, Kuge Y, Shichinohe H, Houkin K, Tamaki N, Kuroda S. PMID: 23881961.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    24. [A case of advanced gastric cancer with esophageal invasion treated by neoadjuvant S-1/CDDP chemotherapy]. Gan To Kagaku Ryoho. 2013 Jul; 40(7):921-4. Kubo N, Takeuchi N, Nakayama A, Ogiwara H, Masahiro O, Tsujimoto K, Ito N. PMID: 23863737.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    25. Carboplatin plus paclitaxel in the successful treatment of advanced inflammatory myofibroblastic tumor. Intern Med. 2012; 51(17):2399-401. Kubo N, Harada T, Anai S, Otsubo K, Yoneshima Y, Ijichi K, Koga T, Takayama K, Nakanishi Y. PMID: 22975556.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    26. A juvenile case of pulmonary lymphangitic carcinomatosis caused by sigmoid colon cancer with a component of micropapillary carcinoma. Intern Med. 2011; 50(20):2361-5. Otsubo K, Kubo N, Nakashima N, Izumi M, Nakamori M, Koto H. PMID: 22001466.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    27. COP35, a cholangiocarcinoma-binding oligopeptide, interacts with the clathrin heavy chain accompanied by GRP78. Mol Cancer Res. 2011 Jun; 9(6):688-701. Kitahara H, Masumoto J, Parker AL, Maruta F, Kubo N, Shimizu A, Akita N, Miwa S, Kobayashi N, Nakayama J, Miyagawa S. PMID: 21571834.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    28. [Successful withdrawal from disseminated intravascular coagulation caused by disseminated carcinomatosis of bone marrow originated from gastric cancer treated by sequential therapy consisting of MTX and 5-FU and palliative radiotherapy]. Gan To Kagaku Ryoho. 2011 Apr; 38(4):693-5. Kubo N, Takeuchi N, Nakayama A, Ogiwara H, Tsujimoto K, Ito N, Koiwai K. PMID: 21499008.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    29. Regional partition coefficient of water in patients with cerebrovascular disease and its effect on rCBF assessment. Nucl Med Commun. 2011 Jan; 32(1):63-70. Hirata K, Hattori N, Katoh C, Shiga T, Kuroda S, Kubo N, Usui R, Kuge Y, Tamaki N. PMID: 21076345.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    30. Semiquantitative analysis of C-11 methionine PET may distinguish brain tumor recurrence from radiation necrosis even in small lesions. Ann Nucl Med. 2011 Apr; 25(3):213-20. Okamoto S, Shiga T, Hattori N, Kubo N, Takei T, Katoh N, Sawamura Y, Nishijima K, Kuge Y, Tamaki N. PMID: 21188660.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansPHPublic Health
    31. Performance characterization of the Inveon preclinical small-animal PET/SPECT/CT system for multimodality imaging. Eur J Nucl Med Mol Imaging. 2011 Apr; 38(4):742-52. Magota K, Kubo N, Kuge Y, Nishijima K, Zhao S, Tamaki N. PMID: 21153410.
      View in: PubMed   Mentions: 30     Fields:    Translation:Animals
    32. [An effective case of gemcitabine therapy with post-operative peritoneal recurrence of intrahepatic cholangiocarcinoma]. Gan To Kagaku Ryoho. 2010 Aug; 37(8):1595-8. Nakayama A, Takasu K, Ogiwara H, Kubo N, Takeuchi N, Tsujimoto K, Ito N, Maruyama A, Shirozaki T, Inoue K, Fujiwara M, Rokuhara T. PMID: 20716895.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    33. A new PET scanner with semiconductor detectors enables better identification of intratumoral inhomogeneity. J Nucl Med. 2009 Jan; 50(1):148-55. Shiga T, Morimoto Y, Kubo N, Katoh N, Katoh C, Takeuchi W, Usui R, Hirata K, Kojima S, Umegaki K, Shirato H, Tamaki N. PMID: 19091886.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    34. [Trial manufacture of a plunger shield for a disposable plastic syringe]. Nihon Hoshasen Gijutsu Gakkai Zasshi. 2008 Aug 20; 64(8):922-9. Murakami S, Emoto T, Mori H, Fujita K, Kubo N. PMID: 18772534.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    35. Identification of oligopeptide binding to colon cancer cells separated from patients using laser capture microdissection. J Drug Target. 2008 Jun; 16(5):396-404. Kubo N, Akita N, Shimizu A, Kitahara H, Parker AL, Miyagawa S. PMID: 18569284.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    36. All-trans retinoic acid enhances murine dendritic cell migration to draining lymph nodes via the balance of matrix metalloproteinases and their inhibitors. J Immunol. 2007 Oct 01; 179(7):4616-25. Darmanin S, Chen J, Zhao S, Cui H, Shirkoohi R, Kubo N, Kuge Y, Tamaki N, Nakagawa K, Hamada J, Moriuchi T, Kobayashi M. PMID: 17878359.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    37. Evaluating performance of a pixel array semiconductor SPECT system for small animal imaging. Ann Nucl Med. 2005 Oct; 19(7):633-9. Kubo N, Zhao S, Fujiki Y, Kinda A, Motomura N, Katoh C, Shiga T, Kawashima H, Kuge Y, Tamaki N. PMID: 16363631.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    38. Sympathetic denervation and reinnervation after the maze procedure. J Nucl Med. 2005 Jul; 46(7):1089-94. Mabuchi M, Imamura M, Kubo N, Morita K, Noriyasu K, Tsukamoto T, Yasuda K, Tamaki N. PMID: 16000276.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCTClinical Trials
    39. Improvement of algorithm for quantification of regional myocardial blood flow using 15O-water with PET. J Nucl Med. 2004 Nov; 45(11):1908-16. Katoh C, Morita K, Shiga T, Kubo N, Nakada K, Tamaki N. PMID: 15534062.
      View in: PubMed   Mentions: 14     Fields:    Translation:CTClinical Trials
    40. [Educational effects on radiological technology students of programs using a simulated aged person and hemiplegia patient]. Nihon Hoshasen Gijutsu Gakkai Zasshi. 2003 Feb; 59(2):295-301. Ogasawara K, Kubo N. PMID: 12668959.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    41. Antitumor activity of compounds isolated from leaves of Eriobotrya japonica. J Agric Food Chem. 2002 Apr 10; 50(8):2400-3. Ito H, Kobayashi E, Li SH, Hatano T, Sugita D, Kubo N, Shimura S, Itoh Y, Tokuda H, Nishino H, Yoshida T. PMID: 11929303.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    42. The effect of scatter correction on 123I-IMP brain perfusion SPET with the triple energy window method in normal subjects using SPM analysis. Eur J Nucl Med Mol Imaging. 2002 Mar; 29(3):342-5. Shiga T, Kubo N, Takano A, Kobayashi J, Takeda Y, Nakamura F, Katoh C, Koyama T, Tsukamoto E, Tamaki N. PMID: 12002708.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCTClinical Trials
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