Mikhail Kolmogorov
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Title(s) | Postdoctoral Scholar, Computer Science and Engineering |
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School | Vc-academic Affairs |
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Address | 9500 Gilman Drive # La Jolla CA 92093
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vCard | Download vCard |
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Bibliographic
Altmetrics Details
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.)
Click a Field or Translation tag to filter the publications.
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metaFlye: scalable long-read metagenome assembly using repeat graphs. Nat Methods. 2020 Nov; 17(11):1103-1110.
Kolmogorov M, Bickhart DM, Behsaz B, Gurevich A, Rayko M, Shin SB, Kuhn K, Yuan J, Polevikov E, Smith TPL, Pevzner PA. PMID: 33020656.
View in: PubMed Mentions: Fields:
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Assembly Graph Browser: interactive visualization of assembly graphs. Bioinformatics. 2019 09 15; 35(18):3476-3478.
Mikheenko A, Kolmogorov M. PMID: 30715194.
View in: PubMed Mentions: Fields:
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Assembly of long, error-prone reads using repeat graphs. Nat Biotechnol. 2019 05; 37(5):540-546.
Kolmogorov M, Yuan J, Lin Y, Pevzner PA. PMID: 30936562.
View in: PubMed Mentions: 136 Fields: Translation: HumansCells
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Chromosome assembly of large and complex genomes using multiple references. Genome Res. 2018 11; 28(11):1720-1732.
Kolmogorov M, Armstrong J, Raney BJ, Streeter I, Dunn M, Yang F, Odom D, Flicek P, Keane TM, Thybert D, Paten B, Pham S. PMID: 30341161.
View in: PubMed Mentions: 15 Fields: Translation: Animals
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High-quality genome sequences of uncultured microbes by assembly of read clouds. Nat Biotechnol. 2018 Oct 15.
Bishara A, Moss EL, Kolmogorov M, Parada AE, Weng Z, Sidow A, Dekas AE, Batzoglou S, Bhatt AS. PMID: 30320765.
View in: PubMed Mentions: 12 Fields:
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Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci. Nat Genet. 2018 11; 50(11):1574-1583.
Lilue J, Doran AG, Fiddes IT, Abrudan M, Armstrong J, Bennett R, Chow W, Collins J, Collins S, Czechanski A, Danecek P, Diekhans M, Dolle DD, Dunn M, Durbin R, Earl D, Ferguson-Smith A, Flicek P, Flint J, Frankish A, Fu B, Gerstein M, Gilbert J, Goodstadt L, Harrow J, Howe K, Ibarra-Soria X, Kolmogorov M, Lelliott CJ, Logan DW, Loveland J, Mathews CE, Mott R, Muir P, Nachtweide S, Navarro FCP, Odom DT, Park N, Pelan S, Pham SK, Quail M, Reinholdt L, Romoth L, Shirley L, Sisu C, Sjoberg-Herrera M, Stanke M, Steward C, Thomas M, Threadgold G, Thybert D, Torrance J, Wong K, Wood J, Yalcin B, Yang F, Adams DJ, Paten B, Keane TM. PMID: 30275530.
View in: PubMed Mentions: 36 Fields: Translation: Animals
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Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes. Genome Res. 2018 04; 28(4):448-459.
Thybert D, Roller M, Navarro FCP, Fiddes I, Streeter I, Feig C, Martin-Galvez D, Kolmogorov M, Janoušek V, Akanni W, Aken B, Aldridge S, Chakrapani V, Chow W, Clarke L, Cummins C, Doran A, Dunn M, Goodstadt L, Howe K, Howell M, Josselin AA, Karn RC, Laukaitis CM, Jingtao L, Martin F, Muffato M, Nachtweide S, Quail MA, Sisu C, Stanke M, Stefflova K, Van Oosterhout C, Veyrunes F, Ward B, Yang F, Yazdanifar G, Zadissa A, Adams DJ, Brazma A, Gerstein M, Paten B, Pham S, Keane TM, Odom DT, Flicek P. PMID: 29563166.
View in: PubMed Mentions: 19 Fields: Translation: AnimalsCells
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Single-molecule protein identification by sub-nanopore sensors. PLoS Comput Biol. 2017 05; 13(5):e1005356.
Kolmogorov M, Kennedy E, Dong Z, Timp G, Pevzner PA. PMID: 28486472.
View in: PubMed Mentions: 8 Fields:
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Assembly of long error-prone reads using de Bruijn graphs. Proc Natl Acad Sci U S A. 2016 12 27; 113(52):E8396-E8405.
Lin Y, Yuan J, Kolmogorov M, Shen MW, Chaisson M, Pevzner PA. PMID: 27956617.
View in: PubMed Mentions: 31 Fields: Translation: Cells
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SpectroGene: A Tool for Proteogenomic Annotations Using Top-Down Spectra. J Proteome Res. 2016 Jan 04; 15(1):144-51.
Kolmogorov M, Liu X, Pevzner PA. PMID: 26629978.
View in: PubMed Mentions: 1 Fields: Translation: Cells
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Ragout-a reference-assisted assembly tool for bacterial genomes. Bioinformatics. 2014 Jun 15; 30(12):i302-9.
Kolmogorov M, Raney B, Paten B, Pham S. PMID: 24931998.
View in: PubMed Mentions: 58 Fields: Translation: Cells
This graph shows the total number of publications by year. To see the data as text, click here.
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Year | Publications |
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2014 | 1 | 2015 | 1 | 2016 | 1 | 2017 | 1 | 2018 | 4 | 2019 | 2 | 2020 | 1 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
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