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Julien Bonnel

Title(s)Professor, Scripps Institution of Oceanography Department
SchoolVc-marine Sciences
Address9500 Gilman Drive #
La Jolla CA 92093
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    1. Particle motion polarization of offshore fish vocalizations versus ambient and ship noise. J Acoust Soc Am. 2025 Sep 01; 158(3):1723-1736. Jones IT, Bonnel J, Flamant J. PMID: 40900136.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsPHPublic Health
    2. Observation and modeling of out-of-plane arrivals on near-bottom recorders at the Atlantis II Seamount Complex. J Acoust Soc Am. 2025 Aug 01; 158(2):1377-1385. Jerome T, Ballard M, Bonnel J, Sagers J. PMID: 40844912.
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    3. Comparison and combination of matched-field and modal-dispersion inversion for seabed geoacoustic profiles at the New England Mud Patch J Acoust Soc Am. 2025 06 01; 157(6):4157-4174. Dosso SE, Wilson PS, Knobles DP, Bonnel J. PMID: 40464706.
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    4. Bayesian matched-field inversion for shear and compressional geoacoustic profiles at the New England Mud Patcha). JASA Express Lett. 2025 Apr 01; 5(4). Dosso SE, Wilson PS, Knobles DP, Bonnel J. PMID: 40178350.
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    5. Estimation of the spatial variability of the New England Mud Patch geoacoustic properties using a distributed array of hydrophones and deep learninga). J Acoust Soc Am. 2024 Dec 01; 156(6):4229-4241. Vardi A, Dahl PH, Dall'Osto D, Knobles D, Wilson P, Leonard J, Bonnel J. PMID: 39718359.
      View in: PubMed   Mentions:    Fields:    
    6. Harnessing (geoacoustic) uncertainty. J Acoust Soc Am. 2024 Jul 01; 156(1):R1-R2. Bonnel J, Lavery A. PMID: 38949287.
      View in: PubMed   Mentions:    Fields:    
    7. Noise pollution causes parental stress on marine invertebrates, the Giant scallop example. Mar Pollut Bull. 2024 Jun; 203:116454. Gigot M, Tremblay R, Bonnel J, Mathias D, Meziane T, Chauvaud L, Olivier F. PMID: 38735172.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsPHPublic Health
    8. On the equivalence of scalar-pressure and vector-based acoustic dosage measures as derived from time-limited signal waveformsa). J Acoust Soc Am. 2024 May 01; 155(5):3291-3301. Dahl PH, Bonnel J, Dall'Osto DR. PMID: 38747716.
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    9. Trans-dimensional inversion for seafloor properties for three mud depocenters on the New England shelf under dynamical oceanographic conditionsa). J Acoust Soc Am. 2024 Mar 01; 155(3):1825-1839. Bonnel J, Dosso SE, Hodgkiss WS, Ballard MS, Garcia DD, Lee KM, McNeese AR, Wilson PS. PMID: 38445985.
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    10. Joint trans-dimensional inversion for water-column sound speed and seabed geoacoustic models. JASA Express Lett. 2023 Jun 01; 3(6). Dosso SE, Bonnel J. PMID: 37294180.
      View in: PubMed   Mentions:    Fields:    
    11. Approximation of modal wavenumbers and group speeds in an oceanic waveguide using a neural network. JASA Express Lett. 2023 Jun 01; 3(6). Varon A, Mars J, Bonnel J. PMID: 37306565.
      View in: PubMed   Mentions:    Fields:    
    12. Pile driving and drilling underwater sounds impact the metamorphosis dynamics of Pecten maximus (L., 1758) larvae. Mar Pollut Bull. 2023 Jun; 191:114969. Gigot M, Olivier F, Cervello G, Tremblay R, Mathias D, Meziane T, Chauvaud L, Bonnel J. PMID: 37148589.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsPHPublic Health
    13. Broadband properties of potential and kinetic energies in an oceanic waveguide. J Acoust Soc Am. 2023 May 01; 153(5):3012. Flamant J, Bonnel J. PMID: 37219496.
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    14. Machine-learning-based simultaneous detection and ranging of impulsive baleen whale vocalizations using a single hydrophone. J Acoust Soc Am. 2023 02; 153(2):1094. Goldwater M, Zitterbart DP, Wright D, Bonnel J. PMID: 36859165.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    15. Three-dimensional anthropogenic underwater noise modeling in an Arctic fjord for acoustic risk assessment. Mar Pollut Bull. 2023 Feb; 187:114487. Richard G, Mathias D, Collin J, Chauvaud L, Bonnel J. PMID: 36584437.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsPHPublic Health
    16. Acoustic scaling in the European spiny lobster (Palinurus elephas). J Acoust Soc Am. 2022 12; 152(6):3235. Jézéquel Y, Bonnel J, Eliès P, Chauvaud L. PMID: 36586865.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    17. Tank acoustics substantially distort broadband sounds produced by marine crustaceans. J Acoust Soc Am. 2022 12; 152(6):3747. Jézéquel Y, Bonnel J, Aoki N, Mooney TA. PMID: 36586829.
      View in: PubMed   Mentions: 1     Fields:    
    18. Do Soluble Phosphates Direct the Formose Reaction towards Pentose Sugars? Astrobiology. 2022 08; 22(8):981-991. Camprubi E, Harrison SA, Jordan SF, Bonnel J, Pinna S, Lane N. PMID: 35833833.
      View in: PubMed   Mentions: 5     Fields:    
    19. Vector acoustic and polarization properties of underwater ship noise. J Acoust Soc Am. 2022 Jun; 151(6):3818. Dahl PH, Bonnel J. PMID: 35778219.
      View in: PubMed   Mentions:    Fields:    
    20. Maximum entropy inference of seabed properties using waveguide invariant features from surface ships. J Acoust Soc Am. 2022 May; 151(5):2885. Knobles DP, Neilsen TB, Wilson PS, Hodgkiss WS, Bonnel J, Lin YT. PMID: 35649902.
      View in: PubMed   Mentions:    Fields:    
    21. TOSSIT: A low-cost, hand deployable, rope-less and acoustically silent mooring for underwater passive acoustic monitoring. HardwareX. 2022 Apr; 11:e00304. Zitterbart DP, Bocconcelli A, Ochs M, Bonnel J. PMID: 35509916; PMCID: PMC9058817.
      View in: PubMed   Mentions:
    22. Classification of dispersive gunshot calls using a convolutional neural network. JASA Express Lett. 2021 10; 1(10):106002. Goldwater M, Bonnel J, Cammareri A, Wright D, Zitterbart DP. PMID: 36154218.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    23. Potential for acoustic masking due to shipping noise in the European lobster (Homarus gammarus). Mar Pollut Bull. 2021 Dec; 173(Pt A):112934. Jézéquel Y, Bonnel J, Chauvaud L. PMID: 34537570.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsPHPublic Health
    24. Polarization of ocean acoustic normal modes. J Acoust Soc Am. 2021 Sep; 150(3):1897. Bonnel J, Flamant J, Dall'Osto DR, Le Bihan N, Dahl PH. PMID: 34598623.
      View in: PubMed   Mentions:    Fields:    
    25. Low-frequency ocean ambient noise on the Chukchi Shelf in the changing Arctic. J Acoust Soc Am. 2021 Jun; 149(6):4061. Bonnel J, Kinda GB, P Zitterbart D. PMID: 34241421.
      View in: PubMed   Mentions: 1     Fields:    
    26. Global COVID-19 lockdown highlights humans as both threats and custodians of the environment. Biol Conserv. 2021 Nov; 263:109175. Bates AE, Primack RB, Biggar BS, Bird TJ, Clinton ME, Command RJ, Richards C, Shellard M, Geraldi NR, Vergara V, Acevedo-Charry O, Colón-Piñeiro Z, Ocampo D, Ocampo-Peñuela N, Sánchez-Clavijo LM, Adamescu CM, Cheval S, Racoviceanu T, Adams MD, Kalisa E, Kuuire VZ, Aditya V, Anderwald P, Wiesmann S, Wipf S, Badihi G, Henderson MG, Loetscher H, Baerenfaller K, Benedetti-Cecchi L, Bulleri F, Bertocci I, Maggi E, Rindi L, Ravaglioli C, Boerder K, Bonnel J, Mathias D, Archambault P, Chauvaud L, Braun CD, Thorrold SR, Brownscombe JW, Midwood JD, Boston CM, Brooks JL, Cooke SJ, China V, Roll U, Belmaker J, Zvuloni A, Coll M, Ortega M, Connors B, Lacko L, Jayathilake DRM, Costello MJ, Crimmins TM, Barnett L, Denny EG, Gerst KL, Marsh RL, Posthumus EE, Rodriguez R, Rosemartin A, Schaffer SN, Switzer JR, Wong K, Cunningham SJ, Sumasgutner P, Amar A, Thomson RL, Stofberg M, Hofmeyr S, Suri J, Stuart-Smith RD, Day PB, Edgar GJ, Cooper AT, De Leo FC, Garner G, Des Brisay PG, Schrimpf MB, Koper N, Diamond MS, Dwyer RG, Baker CJ, Franklin CE, Efrat R, Berger-Tal O, Hatzofe O, Eguíluz VM, Rodríguez JP, Fernández-Gracia J, Elustondo D, Calatayud V, English PA, Archer SK, Dudas SE, Haggarty DR, Gallagher AJ, Shea BD, Shipley ON, Gilby BL, Ballantyne J, Olds AD, Henderson CJ, Schlacher TA, Halliday WD, Brown NAW, Woods MB, Balshine S, Juanes F, Rider MJ, Albano PS, Hammerschlag N, Hays GC, Esteban N, Pan Y, He G, Tanaka T, Hensel MJS, Orth RJ, Patrick CJ, Hentati-Sundberg J, Olsson O, Hessing-Lewis ML, Higgs ND, Hindell MA, McMahon CR, Harcourt R, Guinet C, Hirsch SE, Perrault JR, Hoover SR, Reilly JD, Hobaiter C, Gruber T, Huveneers C, Udyawer V, Clarke TM, Kroesen LP, Hik DS, Cherry SG, Del Bel Belluz JA, Jackson JM, Lai S, Lamb CT, LeClair GD, Parmelee JR, Chatfield MWH, Frederick CA, Lee S, Park H, Choi J, LeTourneux F, Grandmont T, de-Broin FD, Bêty J, Gauthier G, Legagneux P, Lewis JS, Haight J, Liu Z, Lyon JP, Hale R, D'Silva D, MacGregor-Fors I, Arbeláez-Cortés E, Estela FA, Sánchez-Sarria CE, García-Arroyo M, Aguirre-Samboní GK, Franco Morales JC, Malamud S, Gavriel T, Buba Y, Salingré S, Lazarus M, Yahel R, Ari YB, Miller E, Sade R, Lavian G, Birman Z, Gury M, Baz H, Baskin I, Penn A, Dolev A, Licht O, Karkom T, Davidzon S, Berkovitch A, Yaakov O, Manenti R, Mori E, Ficetola GF, Lunghi E, March D, Godley BJ, Martin C, Mihaly SF, Barclay DR, Thomson DJM, Dewey R, Bedard J, Miller A, Dearden A, Chapman J, Dares L, Borden L, Gibbs D, Schultz J, Sergeenko N, Francis F, Weltman A, Moity N, Ramírez-González J, Mucientes G, Alonso-Fernández A, Namir I, Bar-Massada A, Chen R, Yedvab S, Okey TA, Oppel S, Arkumarev V, Bakari S, Dobrev V, Saravia-Mullin V, Bounas A, Dobrev D, Kret E, Mengistu S, Pourchier C, Ruffo A, Tesfaye M, Wondafrash M, Nikolov SC, Palmer C, Sileci L, Rex PT, Lowe CG, Peters F, Pine MK, Radford CA, Wilson L, McWhinnie L, Scuderi A, Jeffs AG, Prudic KL, Larrivée M, McFarland KP, Solis R, Hutchinson RA, Queiroz N, Furtado MA, Sims DW, Southall E, Quesada-Rodriguez CA, Diaz-Orozco JP, Rodgers KS, Severino SJL, Graham AT, Stefanak MP, Madin EMP, Ryan PG, Maclean K, Weideman EA, Sekercioglu ÇH, Kittelberger KD, Kusak J, Seminoff JA, Hanna ME, Shimada T, Meekan MG, Smith MKS, Mokhatla MM, Soh MCK, Pang RYT, Ng BXK, Lee BPY, Loo AHB, Er KBH, Souza GBG, Stallings CD, Curtis JS, Faletti ME, Peake JA, Schram MJ, Wall KR, Terry C, Rothendler M, Zipf L, Ulloa JS, Hernández-Palma A, Gómez-Valencia B, Cruz-Rodríguez C, Herrera-Varón Y, Roa M, Rodríguez-Buriticá S, Ochoa-Quintero JM, Vardi R, Vázquez V, Requena-Mesa C, Warrington MH, Taylor ME, Woodall LC, Stefanoudis PV, Zhang X, Yang Q, Zukerman Y, Sigal Z, Ayali A, Clua EEG, Carzon P, Seguine C, Corradini A, Pedrotti L, Foley CM, Gagnon CA, Panipakoochoo E, Milanes CB, Botero CM, Velázquez YR, Milchakova NA, Morley SA, Martin SM, Nanni V, Otero T, Wakeling J, Abarro S, Piou C, Sobral AFL, Soto EH, Weigel EG, Bernal-Ibáñez A, Gestoso I, Cacabelos E, Cagnacci F, et al. PMID: 34035536; PMCID: PMC8135229.
      View in: PubMed   Mentions: 44  
    27. Sound detection by the American lobster (Homarus americanus). J Exp Biol. 2021 03 25; 224(Pt 6). Jézéquel Y, Jones IT, Bonnel J, Chauvaud L, Atema J, Mooney TA. PMID: 33766953.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    28. Settings of demersal longlines reveal acoustic cues that can inform toothed whales where and when to depredate. JASA Express Lett. 2021 Jan; 1(1):016004. Richard G, Samaran F, Guinet C, Bonnel J. PMID: 36154091.
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    29. Spiny lobster sounds can be detectable over kilometres underwater. Sci Rep. 2020 05 21; 10(1):7943. Jézéquel Y, Chauvaud L, Bonnel J. PMID: 32439882; PMCID: PMC7242360.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsPHPublic Health
    30. Nonlinear time-warping made simple: A step-by-step tutorial on underwater acoustic modal separation with a single hydrophone. J Acoust Soc Am. 2020 03; 147(3):1897. Bonnel J, Thode A, Wright D, Chapman R. PMID: 32237819.
      View in: PubMed   Mentions: 2     Fields:    
    31. Acoustic behaviour of male European lobsters (Homarus gammarus) during agonistic encounters. J Exp Biol. 2020 02 19; 223(Pt 4). Jézéquel Y, Coston-Guarini J, Chauvaud L, Bonnel J. PMID: 31953362.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    32. Dynamic imaging of a capillary-gravity wave in shallow water using amplitude variations of eigenbeams. J Acoust Soc Am. 2019 Nov; 146(5):3353. van Baarsel T, Roux P, Mars JI, Bonnel J, Arrigoni M, Kerampran S, Nicolas B. PMID: 31795667.
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    33. Evidence of deep-sea interactions between toothed whales and longlines. Ambio. 2020 Jan; 49(1):173-186. Richard G, Bonnel J, Tixier P, Arnould JPY, Janc A, Guinet C. PMID: 31055794; PMCID: PMC6889101.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    34. Understanding deep-water striation patterns and predicting the waveguide invariant as a distribution depending on range and depth. J Acoust Soc Am. 2018 Jun; 143(6):3444. Emmetière R, Bonnel J, Géhant M, Cristol X, Chonavel T. PMID: 29960502.
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    35. Geoacoustic inversion on the New England Mud Patch using warping and dispersion curves of high-order modes. J Acoust Soc Am. 2018 May; 143(5):EL405. Bonnel J, Lin YT, Eleftherakis D, Goff JA, Dosso S, Chapman R, Miller JH, Potty GR. PMID: 29857724.
      View in: PubMed   Mentions: 1     Fields:    
    36. Using the trapped energy ratio for source depth discrimination with a horizontal line array: Theory and experimental results. J Acoust Soc Am. 2017 11; 142(5):2776. Conan E, Bonnel J, Nicolas B, Chonavel T. PMID: 29195461.
      View in: PubMed   Mentions: 1     Fields:    
    37. Identification of two potential whale calls in the southern Indian Ocean, and their geographic and seasonal occurrence. J Acoust Soc Am. 2017 09; 142(3):1413. Leroy EC, Samaran F, Bonnel J, Royer JY. PMID: 28964059.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    38. Using nonlinear time warping to estimate North Pacific right whale calling depths in the Bering Sea. J Acoust Soc Am. 2017 05; 141(5):3059. Thode A, Bonnel J, Thieury M, Fagan A, Verlinden C, Wright D, Berchok C, Crance J. PMID: 28599521.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsPHPublic Health
    39. [Intestinal pseudo-obstruction]. Rev Prat. 2017 03 20; 67(3):290. Zumstein C, Piemont A, Bonnel J, Wilhem J. PMID: 30657293.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    40. Waveguide mode amplitude estimation using warping and phase compensation. J Acoust Soc Am. 2017 03; 141(3):2243. Bonnel J, Caporale S, Thode A. PMID: 28372051.
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    41. Acoustic measurements of post-dive cardiac responses in southern elephant seals (Mirounga leonina) during surfacing at sea. J Exp Biol. 2017 05 01; 220(Pt 9):1626-1633. Day L, Jouma'a J, Bonnel J, Guinet C. PMID: 28202583.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    42. Seasonal and Diel Vocalization Patterns of Antarctic Blue Whale (Balaenoptera musculus intermedia) in the Southern Indian Ocean: A Multi-Year and Multi-Site Study. PLoS One. 2016; 11(11):e0163587. Leroy EC, Samaran F, Bonnel J, Royer JY. PMID: 27828976; PMCID: PMC5102468.
      View in: PubMed   Mentions: 8     Fields:    Translation:Animals
    43. Source depth discrimination with a vertical line array. J Acoust Soc Am. 2016 11; 140(5):EL434. Conan E, Bonnel J, Chonavel T, Nicolas B. PMID: 27908045.
      View in: PubMed   Mentions: 2     Fields:    
    44. Bayesian source localization with uncertain Green's function in an uncertain shallow water ocean. J Acoust Soc Am. 2016 Mar; 139(3):993-1004. Le Gall Y, Dosso SE, Socheleau FX, Bonnel J. PMID: 27036237.
      View in: PubMed   Mentions:    Fields:    
    45. Automated detection of Antarctic blue whale calls. J Acoust Soc Am. 2015 Nov; 138(5):3105-17. Socheleau FX, Leroy E, Pecci AC, Samaran F, Bonnel J, Royer JY. PMID: 26627784.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    46. Passive acoustic observations of tide height in the Iroise Sea using ambient noise. J Acoust Soc Am. 2015 Sep; 138(3):EL299-304. Kinda GB, Bonnel J. PMID: 26428830.
      View in: PubMed   Mentions:    Fields:    
    47. Compressed sensing for wideband wavenumber tracking in dispersive shallow water. J Acoust Soc Am. 2015 Aug; 138(2):575-83. Le Courtois F, Bonnel J. PMID: 26328676.
      View in: PubMed   Mentions:    Fields:    
    48. Range estimation of bowhead whale (Balaena mysticetus) calls in the Arctic using a single hydrophone. J Acoust Soc Am. 2014 Jul; 136(1):145-55. Bonnel J, Thode AM, Blackwell SB, Kim K, Macrander AM. PMID: 24993202.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    49. Autoregressive model for high-resolution wavenumber estimation in a shallow water environment using a broadband source. J Acoust Soc Am. 2014 Apr; 135(4):EL199-205. Le Courtois F, Bonnel J. PMID: 25236154.
      View in: PubMed   Mentions:    Fields:    
    50. Inversion of seabed attenuation using time-warping of close range data. J Acoust Soc Am. 2013 Nov; 134(5):EL394-9. Zeng J, Chapman NR, Bonnel J. PMID: 24181981.
      View in: PubMed   Mentions:    Fields:    
    51. Passive estimation of the waveguide invariant per pair of modes. J Acoust Soc Am. 2013 Aug; 134(2):EL230-6. Le Gall Y, Bonnel J. PMID: 23927230.
      View in: PubMed   Mentions: 1     Fields:    Translation:PHPublic Health
    52. Bayesian geoacoustic inversion of single hydrophone light bulb data using warping dispersion analysis. J Acoust Soc Am. 2013 Jul; 134(1):120-30. Bonnel J, Dosso SE, Ross Chapman N. PMID: 23862791.
      View in: PubMed   Mentions: 1     Fields:    
    53. Passive geoacoustic inversion with a single hydrophone using broadband ship noise. J Acoust Soc Am. 2012 Mar; 131(3):1999-2010. Gervaise C, Kinda BG, Bonnel J, Stéphan Y, Vallez S. PMID: 22423697.
      View in: PubMed   Mentions: 1     Fields:    
    54. Single-receiver geoacoustic inversion using modal reversal. J Acoust Soc Am. 2012 Jan; 131(1):119-28. Bonnel J, Gervaise C, Nicolas B, Mars JI. PMID: 22280577.
      View in: PubMed   Mentions: 2     Fields:    
    55. Geoacoustic inversion in a dispersive waveguide using warping operators. J Acoust Soc Am. 2011 Aug; 130(2):EL101-7. Bonnel J, Chapman NR. PMID: 21877767.
      View in: PubMed   Mentions: 1     Fields:    
    56. Modal depth function estimation using time-frequency analysis. J Acoust Soc Am. 2011 Jul; 130(1):61-71. Bonnel J, Gervaise C, Roux P, Nicolas B, Mars JI. PMID: 21786878.
      View in: PubMed   Mentions:    Fields:    
    57. Estimation of modal group velocities with a single receiver for geoacoustic inversion in shallow water. J Acoust Soc Am. 2010 Aug; 128(2):719-27. Bonnel J, Nicolas B, Mars JI, Walker SC. PMID: 20707442.
      View in: PubMed   Mentions: 2     Fields:    
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