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Protected fish spawning aggregations as self-replenishing reservoirs for regional recovery. Proc Biol Sci. 2023 05 10; 290(1998):20230551.
Stock BC, Mullen AD, Jaffe JS, Candelmo A, Heppell SA, Pattengill-Semmens CV, McCoy CM, Johnson BC, Semmens BX. PMID: 37161330; PMCID: PMC10170206.
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1 Fields:
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Animals
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The Sea Spray Chemistry and Particle Evolution study (SeaSCAPE): overview and experimental methods. Environ Sci Process Impacts. 2022 Feb 23; 24(2):290-315.
Sauer JS, Mayer KJ, Lee C, Alves MR, Amiri S, Bahaveolos CJ, Franklin EB, Crocker DR, Dang D, Dinasquet J, Garofalo LA, Kaluarachchi CP, Kilgour DB, Mael LE, Mitts BA, Moon DR, Moore AN, Morris CK, Mullenmeister CA, Ni CM, Pendergraft MA, Petras D, Simpson RMC, Smith S, Tumminello PR, Walker JL, DeMott PJ, Farmer DK, Goldstein AH, Grassian VH, Jaffe JS, Malfatti F, Martz TR, Slade JH, Tivanski AV, Bertram TH, Cappa CD, Prather KA. PMID: 35048927.
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3 Fields:
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Plankton reconstruction through robust statistical optical tomography. J Opt Soc Am A Opt Image Sci Vis. 2021 Sep 01; 38(9):1320-1331.
Ronen R, Attias Y, Schechner YY, Jaffe JS, Orenstein E. PMID: 34613139.
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Underwater dual-magnification imaging for automated lake plankton monitoring. Water Res. 2021 Sep 15; 203:117524.
Merz E, Kozakiewicz T, Reyes M, Ebi C, Isles P, Baity-Jesi M, Roberts P, Jaffe JS, Dennis SR, Hardeman T, Stevens N, Lorimer T, Pomati F. PMID: 34418642.
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3 Fields:
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HumansAnimals
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Self-localization of a mobile swarm using noise correlations with local sources of opportunity. J Acoust Soc Am. 2018 Nov; 144(5):2811.
Naughton P, Roux P, Schurgers C, Kastner R, Jaffe JS, Roberts PLD. PMID: 30522317.
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A swarm of autonomous miniature underwater robot drifters for exploring submesoscale ocean dynamics. Nat Commun. 2017 01 24; 8:14189.
Jaffe JS, Franks PJ, Roberts PL, Mirza D, Schurgers C, Kastner R, Boch A. PMID: 28117837; PMCID: PMC5286117.
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11 Fields:
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Ambient noise correlations on a mobile, deformable array. J Acoust Soc Am. 2016 12; 140(6):4260.
Naughton P, Roux P, Yeakle R, Schurgers C, Kastner R, Jaffe JS, Roberts PL. PMID: 28040049.
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1 Fields:
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Sizing submicron particles from optical scattering data collected with oblique incidence illumination. Appl Opt. 2016 Nov 20; 55(33):9440-9449.
Liao R, Roberts PL, Jaffe JS. PMID: 27869847.
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Underwater microscopy for in situ studies of benthic ecosystems. Nat Commun. 2016 07 12; 7:12093.
Mullen AD, Treibitz T, Roberts PLD, Kelly ELA, Horwitz R, Smith JE, Jaffe JS. PMID: 27403715; PMCID: PMC4945872.
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10 Fields:
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Cuttlefish Sepia officinalis Preferentially Respond to Bottom Rather than Side Stimuli When Not Allowed Adjacent to Tank Walls. PLoS One. 2015; 10(10):e0138690.
Taniguchi DA, Gagnon Y, Wheeler BR, Johnsen S, Jaffe JS. PMID: 26465786; PMCID: PMC4605735.
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2 Fields:
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Animals
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Deep-sea low-light radiometer system. Opt Express. 2014 Dec 01; 22(24):30074-91.
Haag JM, Roberts PL, Papen GC, Jaffe JS, Li L, Stramski D. PMID: 25606937.
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Animals
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Measurement system for marine animal reflectance functions. Opt Express. 2013 Feb 11; 21(3):3603-16.
Haag JM, Jaffe JS, Sweeney AM. PMID: 23481817.
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2 Fields:
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Animals
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Estimating fish orientation from broadband, limited-angle, multiview, acoustic reflections. J Acoust Soc Am. 2011 Feb; 129(2):670-80.
Jaffe JS, Roberts PL. PMID: 21361426.
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AnimalsPHPublic Health
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Enhanced extended range underwater imaging via structured illumination. Opt Express. 2010 Jun 07; 18(12):12328-40.
Jaffe JS. PMID: 20588358.
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Sizing homogeneous spherical particles from intensity-only angular scatter. J Opt Soc Am A Opt Image Sci Vis. 2010 Feb 01; 27(2):151-8.
Li W, Jaffe JS. PMID: 20126224.
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PHPublic Health
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Classification of live, untethered zooplankton from observations of multiple-angle acoustic scatter. J Acoust Soc Am. 2008 Aug; 124(2):796-802.
Roberts PL, Jaffe JS. PMID: 18681572.
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Animals
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A tomographic approach to inverse mie particle characterization from scattered light. Opt Express. 2007 Sep 17; 15(19):12217-29.
Jaffe JS. PMID: 19547589.
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1 Fields:
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Multiple angle acoustic classification of zooplankton. J Acoust Soc Am. 2007 Apr; 121(4):2060-70.
Roberts PL, Jaffe JS. PMID: 17471722.
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1 Fields:
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Animals
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Measurement of the acoustic reflectivity of sirenia (Florida manatees) at 171 kHz. J Acoust Soc Am. 2007 Jan; 121(1):158-65.
Jaffe JS, Simonet F, Roberts PL, Bowles AE. PMID: 17297771.
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Animals
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Angular resolved light scattering for discriminating among marine picoplankton: modeling and experimental measurements. Opt Express. 2006 Dec 11; 14(25):12473-84.
Shao B, Jaffe JS, Chachisvilis M, Esener SC. PMID: 19529681.
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Swimming against the flow: a mechanism of zooplankton aggregation. Science. 2005 May 06; 308(5723):860-2.
Genin A, Jaffe JS, Reef R, Richter C, Franks PJ. PMID: 15879218.
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32 Fields:
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Animals
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Performance bounds on synchronous laser line scan systems. Opt Express. 2005 Feb 07; 13(3):738-48.
Jaffe J. PMID: 19494934.
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1 Fields:
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Design and preliminary tests of a family of adaptive waveforms to measure blood vessel diameter and wall thickness. IEEE Trans Ultrason Ferroelectr Freq Control. 2005 Feb; 52(2):250-60.
Ai Y, Jaffe JS. PMID: 15801313.
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Humans
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Experimental verification of an interpolation algorithm for improved estimates of animal position. J Acoust Soc Am. 2004 Jul; 116(1):254-61.
Schell C, Jaffe JS. PMID: 15295985.
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Animals
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Thin laser light sheet microscope for microbial oceanography. Opt Express. 2002 Jan 28; 10(2):145-54.
Fuchs E, Jaffe J, Long R, Azam F. PMID: 19424342.
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47 Fields: