Joanne Chory

Title(s)Adjunct Professor, Cell and Developmental Biology
SchoolAcademic Aff
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Bürger M, Mashiguchi K, Lee HJ, Nakano M, Takemoto K, Seto Y, Yamaguchi S, Chory J. Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens. Cell Rep. 2019 Jan 22; 26(4):855-865.e5. PMID: 30673608.
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    2. Ren H, Willige BC, Jaillais Y, Geng S, Park MY, Gray WM, Chory J. BRASSINOSTEROID-SIGNALING KINASE 3, a plasma membrane-associated scaffold protein involved in early brassinosteroid signaling. PLoS Genet. 2019 Jan; 15(1):e1007904. PMID: 30615605.
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    3. Bürger M, Chory J. Erratum: Publisher Correction: Structural and chemical biology of deacetylases for carbohydrates, proteins, small molecules and histones. Commun Biol. 2019; 2:16. PMID: 30623108.
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    4. Bürger M, Chory J. Structural and chemical biology of deacetylases for carbohydrates, proteins, small molecules and histones. Commun Biol. 2018; 1:217. PMID: 30534609.
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    5. Calil IP, Quadros IPS, Araújo TC, Duarte CEM, Gouveia-Mageste BC, Silva JCF, Brustolini OJB, Teixeira RM, Oliveira CN, Milagres RWMM, Martins GS, Chory J, Reis PAB, Machado JPB, Fontes EPB. A WW Domain-Containing Protein Forms Immune Nuclear Bodies against Begomoviruses. Mol Plant. 2018 Dec 03; 11(12):1449-1465. PMID: 30296599.
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    6. Zhao X, Huang J, Chory J. genome uncoupled1 Mutants Are Hypersensitive to Norflurazon and Lincomycin. Plant Physiol. 2018 Nov; 178(3):960-964. PMID: 30154176.
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    7. Cagnola JI, Cerdán PD, Pacín M, Andrade A, Rodriguez V, Zurbriggen MD, Legris M, Buchovsky S, Carrillo N, Chory J, Blázquez MA, Alabadi D, Casal JJ. Long-Day Photoperiod Enhances Jasmonic Acid-Related Plant Defense. Plant Physiol. 2018 Sep; 178(1):163-173. PMID: 30068539.
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    8. Willige BC, Chory J, Bürger M. Next Generation of Plant-Associated Bacterial Genome Data. Cell Host Microbe. 2018 07 11; 24(1):10-11. PMID: 30001515.
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    9. Perrella G, Davidson MLH, O'Donnell L, Nastase AM, Herzyk P, Breton G, Pruneda-Paz JL, Kay SA, Chory J, Kaiserli E. ZINC-FINGER interactions mediate transcriptional regulation of hypocotyl growth in Arabidopsis. Proc Natl Acad Sci U S A. 2018 05 08; 115(19):E4503-E4511. PMID: 29686058.
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    10. Liu W, Duttke SH, Hetzel J, Groth M, Feng S, Gallego-Bartolome J, Zhong Z, Kuo HY, Wang Z, Zhai J, Chory J, Jacobsen SE. RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis. Nat Plants. 2018 Mar; 4(3):181-188. PMID: 29379150.
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    11. Bürger M, Willige BC, Chory J. A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors. Nat Commun. 2017 12 19; 8(1):2201. PMID: 29259199.
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    12. Qiu Y, Pasoreck EK, Reddy AK, Nagatani A, Ma W, Chory J, Chen M. Mechanism of early light signaling by the carboxy-terminal output module of Arabidopsis phytochrome B. Nat Commun. 2017 12 04; 8(1):1905. PMID: 29199270.
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    13. Conn A, Pedmale UV, Chory J, Navlakha S. High-Resolution Laser Scanning Reveals Plant Architectures that Reflect Universal Network Design Principles. Cell Syst. 2017 Jul 26; 5(1):53-62.e3. PMID: 28750198.
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    14. Conn A, Pedmale UV, Chory J, Stevens CF, Navlakha S. A Statistical Description of Plant Shoot Architecture. Curr Biol. 2017 Jul 24; 27(14):2078-2088.e3. PMID: 28690115.
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    15. Vermeer JEM, van Wijk R, Goedhart J, Geldner N, Chory J, Gadella TWJ, Munnik T. In Vivo Imaging of Diacylglycerol at the Cytoplasmic Leaflet of Plant Membranes. Plant Cell Physiol. 2017 Jul 01; 58(7):1196-1207. PMID: 28158855.
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    16. Seluzicki A, Burko Y, Chory J. Dancing in the dark: darkness as a signal in plants. Plant Cell Environ. 2017 Nov; 40(11):2487-2501. PMID: 28044340.
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    17. Hetzel J, Duttke SH, Benner C, Chory J. Nascent RNA sequencing reveals distinct features in plant transcription. Proc Natl Acad Sci U S A. 2016 10 25; 113(43):12316-12321. PMID: 27729530.
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    18. Procko C, Burko Y, Jaillais Y, Ljung K, Long JA, Chory J. Corrigendum: The epidermis coordinates auxin-induced stem growth in response to shade. Genes Dev. 2016 09 01; 30(17):2018. PMID: 27664239.
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    19. de Saint Germain A, Clavé G, Badet-Denisot MA, Pillot JP, Cornu D, Le Caer JP, Burger M, Pelissier F, Retailleau P, Turnbull C, Bonhomme S, Chory J, Rameau C, Boyer FD. An histidine covalent receptor and butenolide complex mediates strigolactone perception. Nat Chem Biol. 2016 10; 12(10):787-794. PMID: 27479744.
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    20. Procko C, Burko Y, Jaillais Y, Ljung K, Long JA, Chory J. The epidermis coordinates auxin-induced stem growth in response to shade. Genes Dev. 2016 07 01; 30(13):1529-41. PMID: 27401556; PMCID: PMC4949326 [Available on 01/01/17].
    21. Yazaki J, Galli M, Kim AY, Nito K, Aleman F, Chang KN, Carvunis AR, Quan R, Nguyen H, Song L, Alvarez JM, Huang SS, Chen H, Ramachandran N, Altmann S, Gutiérrez RA, Hill DE, Schroeder JI, Chory J, LaBaer J, Vidal M, Braun P, Ecker JR. Mapping transcription factor interactome networks using HaloTag protein arrays. Proc Natl Acad Sci U S A. 2016 07 19; 113(29):E4238-47. PMID: 27357687; PMCID: PMC4961138.
    22. Bjornson M, Dandekar AM, Chory J, Dehesh K. Brassinosteroid's multi-modular interaction with the general stress network customizes stimulus-specific responses in Arabidopsis. Plant Sci. 2016 Sep; 250:165-177. PMID: 27457993.
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    23. Zheng Z, Guo Y, Novák O, Chen W, Ljung K, Noel JP, Chory J. Local auxin metabolism regulates environment-induced hypocotyl elongation. Nat Plants. 2016 03 21; 2:16025. PMID: 27249562; PMCID: PMC4849989 [Available on 09/21/16].
    24. Pedmale UV, Huang SC, Zander M, Cole BJ, Hetzel J, Ljung K, Reis PAB, Sridevi P, Nito K, Nery JR, Ecker JR, Chory J. Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light. Cell. 2016 Jan 14; 164(1-2):233-245. PMID: 26724867; PMCID: PMC4721562 [Available on 01/14/17].
    25. Kaiserli E, Páldi K, O'Donnell L, Batalov O, Pedmale UV, Nusinow DA, Kay SA, Chory J. Integration of Light and Photoperiodic Signaling in Transcriptional Nuclear Foci. Dev Cell. 2015 Nov 09; 35(3):311-21. PMID: 26555051; PMCID: PMC4654455 [Available on 11/09/16].
    26. Woodson JD, Joens MS, Sinson AB, Gilkerson J, Salomé PA, Weigel D, Fitzpatrick JA, Chory J. Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts. Science. 2015 Oct 23; 350(6259):450-4. PMID: 26494759; PMCID: PMC4863637.
    27. Willige BC, Chory J. A current perspective on the role of AGCVIII kinases in PIN-mediated apical hook development. Front Plant Sci. 2015; 6:767. PMID: 26500658; PMCID: PMC4593951.
    28. Yu J, Qiu H, Liu X, Wang M, Gao Y, Chory J, Tao Y. Characterization of tub4(P287L) , a ß-tubulin mutant, revealed new aspects of microtubule regulation in shade. J Integr Plant Biol. 2015 Sep; 57(9):757-69. PMID: 25899068; PMCID: PMC4779058.
    29. Wudick MM, Li X, Valentini V, Geldner N, Chory J, Lin J, Maurel C, Luu DT. Subcellular Redistribution of Root Aquaporins Induced by Hydrogen Peroxide. Mol Plant. 2015 Jul; 8(7):1103-14. PMID: 25749111.
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    30. Zorzatto C, Machado JP, Lopes KV, Nascimento KJ, Pereira WA, Brustolini OJ, Reis PA, Calil IP, Deguchi M, Sachetto-Martins G, Gouveia BC, Loriato VA, Silva MA, Silva FF, Santos AA, Chory J, Fontes EP. NIK1-mediated translation suppression functions as a plant antiviral immunity mechanism. Nature. 2015 Apr 30; 520(7549):679-82. PMID: 25707794; PMCID: PMC4779052.
    31. Brustolini OJB, Machado JPB, Condori-Apfata JA, Coco D, Deguchi M, Loriato VAP, Pereira WA, Alfenas-Zerbini P, Zerbini FM, Inoue-Nagata AK, Santos AA, Chory J, Silva FF, Fontes EPB. Sustained NIK-mediated antiviral signalling confers broad-spectrum tolerance to begomoviruses in cultivated plants. Plant Biotechnol J. 2015 Dec; 13(9):1300-1311. PMID: 25688422; PMCID: PMC4857726 [Available on 12/01/16].
    32. Martins S, Dohmann EM, Cayrel A, Johnson A, Fischer W, Pojer F, Satiat-Jeunemaître B, Jaillais Y, Chory J, Geldner N, Vert G. Internalization and vacuolar targeting of the brassinosteroid hormone receptor BRI1 are regulated by ubiquitination. Nat Commun. 2015 Jan 21; 6:6151. PMID: 25608221; PMCID: PMC4713032.
    33. Chory J. Interview with Joanne Chory. Trends Biochem Sci. 2014 Oct; 39(10):435-6. PMID: 25220379.
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    34. Belkhadir Y, Yang L, Hetzel J, Dangl JL, Chory J. The growth-defense pivot: crisis management in plants mediated by LRR-RK surface receptors. Trends Biochem Sci. 2014 Oct; 39(10):447-56. PMID: 25089011; PMCID: PMC4177940.
    35. Krzymuski M, Cerdán PD, Zhu L, Vinh A, Chory J, Huq E, Casal JJ. Phytochrome A antagonizes PHYTOCHROME INTERACTING FACTOR 1 to prevent over-activation of photomorphogenesis. Mol Plant. 2014 Sep; 7(9):1415-1428. PMID: 25009301.
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    36. Li L, Zhang Q, Pedmale UV, Nito K, Fu W, Lin L, Hazen SP, Chory J. PIL1 participates in a negative feedback loop that regulates its own gene expression in response to shade. Mol Plant. 2014 Oct; 7(10):1582-5. PMID: 24895419; PMCID: PMC4271063.
    37. Procko C, Crenshaw CM, Ljung K, Noel JP, Chory J. Cotyledon-Generated Auxin Is Required for Shade-Induced Hypocotyl Growth in Brassica rapa. Plant Physiol. 2014 Jul; 165(3):1285-1301. PMID: 24891610.
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    38. Zhong X, Du J, Hale CJ, Gallego-Bartolome J, Feng S, Vashisht AA, Chory J, Wohlschlegel JA, Patel DJ, Jacobsen SE. Molecular mechanism of action of plant DRM de novo DNA methyltransferases. Cell. 2014 May 22; 157(5):1050-60. PMID: 24855943.
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    39. Fitz Gerald JN, Carlson AL, Smith E, Maloof JN, Weigel D, Chory J, Borevitz JO, Swanson RJ. New Arabidopsis advanced intercross recombinant inbred lines reveal female control of nonrandom mating. Plant Physiol. 2014 May; 165(1):175-85. PMID: 24623850.
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    40. Zheng Z, Germain AS, Chory J. Unfolding the mysteries of strigolactone signaling. Mol Plant. 2014 Jun; 7(6):934-936. PMID: 24623790.
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    41. Simon ML, Platre MP, Assil S, van Wijk R, Chen WY, Chory J, Dreux M, Munnik T, Jaillais Y. A multi-colour/multi-affinity marker set to visualize phosphoinositide dynamics in Arabidopsis. Plant J. 2014 Jan; 77(2):322-37. PMID: 24147788; PMCID: PMC3981938.
    42. Jung HS, Crisp PA, Estavillo GM, Cole B, Hong F, Mockler TC, Pogson BJ, Chory J. Subset of heat-shock transcription factors required for the early response of Arabidopsis to excess light. Proc Natl Acad Sci U S A. 2013 Aug 27; 110(35):14474-9. PMID: 23918368; PMCID: PMC3761602.
    43. Nito K, Wong CC, Yates JR, Chory J. Tyrosine phosphorylation regulates the activity of phytochrome photoreceptors. Cell Rep. 2013 Jun 27; 3(6):1970-9. PMID: 23746445; PMCID: PMC4023694.
    44. Zhong SH, Liu JZ, Jin H, Lin L, Li Q, Chen Y, Yuan YX, Wang ZY, Huang H, Qi YJ, Chen XY, Vaucheret H, Chory J, Li J, He ZH. Warm temperatures induce transgenerational epigenetic release of RNA silencing by inhibiting siRNA biogenesis in Arabidopsis. Proc Natl Acad Sci U S A. 2013 May 28; 110(22):9171-6. PMID: 23686579; PMCID: PMC3670308.
    45. Guo Y, Zheng Z, La Clair JJ, Chory J, Noel JP. Smoke-derived karrikin perception by the a/ß-hydrolase KAI2 from Arabidopsis. Proc Natl Acad Sci U S A. 2013 May 14; 110(20):8284-9. PMID: 23613584; PMCID: PMC3657771.
    46. Shani E, Weinstain R, Zhang Y, Castillejo C, Kaiserli E, Chory J, Tsien RY, Estelle M. Gibberellins accumulate in the elongating endodermal cells of Arabidopsis root. Proc Natl Acad Sci U S A. 2013 Mar 19; 110(12):4834-9. PMID: 23382232; PMCID: PMC3606980.
    47. Zheng Z, Guo Y, Novák O, Dai X, Zhao Y, Ljung K, Noel JP, Chory J. Coordination of auxin and ethylene biosynthesis by the aminotransferase VAS1. Nat Chem Biol. 2013 Apr; 9(4):244-6. PMID: 23377040; PMCID: PMC3948326.
    48. Woodson JD, Perez-Ruiz JM, Schmitz RJ, Ecker JR, Chory J. Sigma factor-mediated plastid retrograde signals control nuclear gene expression. Plant J. 2013 Jan; 73(1):1-13. PMID: 22950756; PMCID: PMC3605210.
    49. Iñigo S, Giraldez AN, Chory J, Cerdán PD. Proteasome-mediated turnover of Arabidopsis MED25 is coupled to the activation of FLOWERING LOCUS T transcription. Plant Physiol. 2012 Nov; 160(3):1662-73. PMID: 22992513; PMCID: PMC3490578.
    50. Woodson JD, Chory J. Organelle signaling: how stressed chloroplasts communicate with the nucleus. Curr Biol. 2012 Sep 11; 22(17):R690-2. PMID: 22974998; PMCID: PMC4854192.
    51. Gilkerson J, Perez-Ruiz JM, Chory J, Callis J. The plastid-localized pfkB-type carbohydrate kinases FRUCTOKINASE-LIKE 1 and 2 are essential for growth and development of Arabidopsis thaliana. BMC Plant Biol. 2012 Jul 08; 12:102. PMID: 22770232; PMCID: PMC3409070.
    52. Li L, Ljung K, Breton G, Schmitz RJ, Pruneda-Paz J, Cowing-Zitron C, Cole BJ, Ivans LJ, Pedmale UV, Jung HS, Ecker JR, Kay SA, Chory J. Linking photoreceptor excitation to changes in plant architecture. Genes Dev. 2012 Apr 15; 26(8):785-90. PMID: 22508725; PMCID: PMC3337452.
    53. Lu YJ, Schornack S, Spallek T, Geldner N, Chory J, Schellmann S, Schumacher K, Kamoun S, Robatzek S. Patterns of plant subcellular responses to successful oomycete infections reveal differences in host cell reprogramming and endocytic trafficking. Cell Microbiol. 2012 May; 14(5):682-97. PMID: 22233428; PMCID: PMC4854193.
    54. Cole BJ, Chory J. Image-based analysis of light-grown seedling hypocotyls in Arabidopsis. Methods Mol Biol. 2012; 918:1-7. PMID: 22893281.
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    55. Vert G, Chory J. Crosstalk in cellular signaling: background noise or the real thing? Dev Cell. 2011 Dec 13; 21(6):985-91. PMID: 22172668; PMCID: PMC3281494.
    56. Belkhadir Y, Jaillais Y, Epple P, Balsemão-Pires E, Dangl JL, Chory J. Brassinosteroids modulate the efficiency of plant immune responses to microbe-associated molecular patterns. Proc Natl Acad Sci U S A. 2012 Jan 03; 109(1):297-302. PMID: 22087001; PMCID: PMC3252953.
    57. Won C, Shen X, Mashiguchi K, Zheng Z, Dai X, Cheng Y, Kasahara H, Kamiya Y, Chory J, Zhao Y. Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis. Proc Natl Acad Sci U S A. 2011 Nov 08; 108(45):18518-23. PMID: 22025721; PMCID: PMC3215067.
    58. Hothorn M, Dabi T, Chory J. Structural basis for cytokinin recognition by Arabidopsis thaliana histidine kinase 4. Nat Chem Biol. 2011 Oct 02; 7(11):766-8. PMID: 21964459; PMCID: PMC3197759.
    59. Cuyvers S, Dornez E, Abou Hachem M, Svensson B, Hothorn M, Chory J, Delcour JA, Courtin CM. Isothermal titration calorimetry and surface plasmon resonance allow quantifying substrate binding to different binding sites of Bacillus subtilis xylanase. Anal Biochem. 2012 Jan 01; 420(1):90-2. PMID: 21964501; PMCID: PMC4854199.
    60. Chen M, Chory J. Phytochrome signaling mechanisms and the control of plant development. Trends Cell Biol. 2011 Nov; 21(11):664-71. PMID: 21852137; PMCID: PMC3205231.
    61. Balsemão-Pires E, Jaillais Y, Olson BJ, Andrade LR, Umen JG, Chory J, Sachetto-Martins G. The Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism. BMC Plant Biol. 2011 Jun 20; 11:108. PMID: 21689410; PMCID: PMC3141639.
    62. Hothorn M, Belkhadir Y, Dreux M, Dabi T, Noel JP, Wilson IA, Chory J. Structural basis of steroid hormone perception by the receptor kinase BRI1. Nature. 2011 Jun 12; 474(7352):467-71. PMID: 21666665; PMCID: PMC3280218.
    63. Filichkin SA, Breton G, Priest HD, Dharmawardhana P, Jaiswal P, Fox SE, Michael TP, Chory J, Kay SA, Mockler TC. Global profiling of rice and poplar transcriptomes highlights key conserved circadian-controlled pathways and cis-regulatory modules. PLoS One. 2011; 6(6):e16907. PMID: 21694767; PMCID: PMC3111414.
    64. Keller MM, Jaillais Y, Pedmale UV, Moreno JE, Chory J, Ballaré CL. Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades. Plant J. 2011 Jul; 67(2):195-207. PMID: 21457375; PMCID: PMC3135679.
    65. Woodson JD, Perez-Ruiz JM, Chory J. Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. Curr Biol. 2011 May 24; 21(10):897-903. PMID: 21565502; PMCID: PMC4886857.
    66. Wu G, Wang X, Li X, Kamiya Y, Otegui MS, Chory J. Methylation of a phosphatase specifies dephosphorylation and degradation of activated brassinosteroid receptors. Sci Signal. 2011 May 10; 4(172):ra29. PMID: 21558554; PMCID: PMC4854194.
    67. Jaillais Y, Belkhadir Y, Balsemão-Pires E, Dangl JL, Chory J. Extracellular leucine-rich repeats as a platform for receptor/coreceptor complex formation. Proc Natl Acad Sci U S A. 2011 May 17; 108(20):8503-7. PMID: 21464298; PMCID: PMC3100946.
    68. Cole B, Kay SA, Chory J. Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis. Plant J. 2011 Mar; 65(6):991-1000. PMID: 21288269; PMCID: PMC3076959.
    69. Jaillais Y, Hothorn M, Belkhadir Y, Dabi T, Nimchuk ZL, Meyerowitz EM, Chory J. Tyrosine phosphorylation controls brassinosteroid receptor activation by triggering membrane release of its kinase inhibitor. Genes Dev. 2011 Feb 01; 25(3):232-7. PMID: 21289069; PMCID: PMC3034898.
    70. Hacham Y, Holland N, Butterfield C, Ubeda-Tomas S, Bennett MJ, Chory J, Savaldi-Goldstein S. Brassinosteroid perception in the epidermis controls root meristem size. Development. 2011 Mar; 138(5):839-48. PMID: 21270053; PMCID: PMC3035089.
    71. Skylar A, Sung F, Hong F, Chory J, Wu X. Metabolic sugar signal promotes Arabidopsis meristematic proliferation via G2. Dev Biol. 2011 Mar 01; 351(1):82-9. PMID: 21185286; PMCID: PMC3041830.
    72. Chen M, Galvão RM, Li M, Burger B, Bugea J, Bolado J, Chory J. Arabidopsis HEMERA/pTAC12 initiates photomorphogenesis by phytochromes. Cell. 2010 Jun 25; 141(7):1230-40. PMID: 20603003.
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    73. Isono E, Katsiarimpa A, Müller IK, Anzenberger F, Stierhof YD, Geldner N, Chory J, Schwechheimer C. The deubiquitinating enzyme AMSH3 is required for intracellular trafficking and vacuole biogenesis in Arabidopsis thaliana. Plant Cell. 2010 Jun; 22(6):1826-37. PMID: 20543027; PMCID: PMC2910964.
    74. Todesco M, Balasubramanian S, Hu TT, Traw MB, Horton M, Epple P, Kuhns C, Sureshkumar S, Schwartz C, Lanz C, Laitinen RA, Huang Y, Chory J, Lipka V, Borevitz JO, Dangl JL, Bergelson J, Nordborg M, Weigel D. Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana. Nature. 2010 Jun 03; 465(7298):632-6. PMID: 20520716; PMCID: PMC3055268.
    75. Jaillais Y, Chory J. Unraveling the paradoxes of plant hormone signaling integration. Nat Struct Mol Biol. 2010 Jun; 17(6):642-5. PMID: 20520656; PMCID: PMC3166629.
    76. Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JD, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 2010 Jun 03; 465(7298):627-31. PMID: 20336072; PMCID: PMC3023908.
    77. Chory J. Light signal transduction: an infinite spectrum of possibilities. Plant J. 2010 Mar; 61(6):982-91. PMID: 20409272; PMCID: PMC3124631.
    78. Skylar A, Hong F, Chory J, Weigel D, Wu X. STIMPY mediates cytokinin signaling during shoot meristem establishment in Arabidopsis seedlings. Development. 2010 Feb; 137(4):541-9. PMID: 20110319; PMCID: PMC2827612.
    79. Jung HS, Chory J. Signaling between chloroplasts and the nucleus: can a systems biology approach bring clarity to a complex and highly regulated pathway? Plant Physiol. 2010 Feb; 152(2):453-9. PMID: 19933385; PMCID: PMC2815895.
    80. Ausin I, Mockler TC, Chory J, Jacobsen SE. IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana. Nat Struct Mol Biol. 2009 Dec; 16(12):1325-7. PMID: 19915591; PMCID: PMC2842998.
    81. Nishimura N, Sarkeshik A, Nito K, Park SY, Wang A, Carvalho PC, Lee S, Caddell DF, Cutler SR, Chory J, Yates JR, Schroeder JI. PYR/PYL/RCAR family members are major in-vivo ABI1 protein phosphatase 2C-interacting proteins in Arabidopsis. Plant J. 2010 Jan; 61(2):290-9. PMID: 19874541; PMCID: PMC2807913.
    82. Pinheiro H, Samalova M, Geldner N, Chory J, Martinez A, Moore I. Genetic evidence that the higher plant Rab-D1 and Rab-D2 GTPases exhibit distinct but overlapping interactions in the early secretory pathway. J Cell Sci. 2009 Oct 15; 122(Pt 20):3749-58. PMID: 19789181; PMCID: PMC2758805.
    83. Vert G, Chory J. A toggle switch in plant nitrate uptake. Cell. 2009 Sep 18; 138(6):1064-6. PMID: 19766561.
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    84. Schwartz C, Balasubramanian S, Warthmann N, Michael TP, Lempe J, Sureshkumar S, Kobayashi Y, Maloof JN, Borevitz JO, Chory J, Weigel D. Cis-regulatory changes at FLOWERING LOCUS T mediate natural variation in flowering responses of Arabidopsis thaliana. Genetics. 2009 Oct; 183(2):723-32, 1SI-7SI. PMID: 19652183; PMCID: PMC2766330.
    85. Ibañes M, Fàbregas N, Chory J, Caño-Delgado AI. Brassinosteroid signaling and auxin transport are required to establish the periodic pattern of Arabidopsis shoot vascular bundles. Proc Natl Acad Sci U S A. 2009 Aug 11; 106(32):13630-5. PMID: 19666540; PMCID: PMC2717112.
    86. Adhikari ND, Orler R, Chory J, Froehlich JE, Larkin RM. Porphyrins promote the association of GENOMES UNCOUPLED 4 and a Mg-chelatase subunit with chloroplast membranes. J Biol Chem. 2009 Sep 11; 284(37):24783-96. PMID: 19605356; PMCID: PMC2757182.
    87. De Rybel B, Audenaert D, Vert G, Rozhon W, Mayerhofer J, Peelman F, Coutuer S, Denayer T, Jansen L, Nguyen L, Vanhoutte I, Beemster GT, Vleminckx K, Jonak C, Chory J, Inzé D, Russinova E, Beeckman T. Chemical inhibition of a subset of Arabidopsis thaliana GSK3-like kinases activates brassinosteroid signaling. Chem Biol. 2009 Jun 26; 16(6):594-604. PMID: 19549598; PMCID: PMC4854203.
    88. Sellaro R, Hoecker U, Yanovsky M, Chory J, Casal JJ. Synergism of red and blue light in the control of Arabidopsis gene expression and development. Curr Biol. 2009 Jul 28; 19(14):1216-20. PMID: 19559617; PMCID: PMC2730174.
    89. Liljegren SJ, Leslie ME, Darnielle L, Lewis MW, Taylor SM, Luo R, Geldner N, Chory J, Randazzo PA, Yanofsky MF, Ecker JR. Regulation of membrane trafficking and organ separation by the NEVERSHED ARF-GAP protein. Development. 2009 Jun; 136(11):1909-18. PMID: 19429787; PMCID: PMC2680113.
    90. Pan Y, Michael TP, Hudson ME, Kay SA, Chory J, Schuler MA. Cytochrome P450 monooxygenases as reporters for circadian-regulated pathways. Plant Physiol. 2009 Jun; 150(2):858-78. PMID: 19386812; PMCID: PMC2689971.
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    128. Yin Y, Chory J, Baulcombe D. RNAi in transgenic plants. Curr Protoc Mol Biol. 2005 Nov; Chapter 26:Unit 26.6. PMID: 18265365.
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    152. Nomura T, Bishop GJ, Kaneta T, Reid JB, Chory J, Yokota T. The LKA gene is a BRASSINOSTEROID INSENSITIVE 1 homolog of pea. Plant J. 2003 Nov; 36(3):291-300. PMID: 14617087.
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    153. Maxwell BB, Andersson CR, Poole DS, Kay SA, Chory J. HY5, Circadian Clock-Associated 1, and a cis-element, DET1 dark response element, mediate DET1 regulation of chlorophyll a/b-binding protein 2 expression. Plant Physiol. 2003 Dec; 133(4):1565-77. PMID: 14563928; PMCID: PMC300714.
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