Jeffrey Rudie

Title(s)Assistant Adjunct Professor, Radiology
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. The University of California San Francisco Adult Longitudinal Post-Treatment Diffuse Glioma MRI Dataset. Radiol Artif Intell. 2024 Jul; 6(4):e230182. Fields BKK, Calabrese E, Mongan J, Cha S, Hess CP, Sugrue LP, Chang SM, Luks TL, Villanueva-Meyer JE, Rauschecker AM, Rudie JD. PMID: 38864741; PMCID: PMC11294954.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    2. The Brain Tumor Segmentation - Metastases (BraTS-METS) Challenge 2023: Brain Metastasis Segmentation on Pre-treatment MRI. ArXiv. 2024 Jun 17. Moawad AW, Janas A, Baid U, Ramakrishnan D, Saluja R, Ashraf N, Jekel L, Amiruddin R, Adewole M, Albrecht J, Anazodo U, Aneja S, Anwar SM, Bergquist T, Calabrese E, Chiang V, Chung V, Conte GMM, Dako F, Eddy J, Ezhov I, Familiar A, Farahani K, Iglesias JE, Jiang Z, Johanson E, Kazerooni AF, Kofler F, Krantchev K, LaBella D, Van Leemput K, Li HB, Linguraru MG, Link KE, Liu X, Maleki N, Meier Z, Menze BH, Moy H, Osenberg K, Piraud M, Reitman Z, Shinohara RT, Tahon NH, Nada A, Velichko YS, Wang C, Wiestler B, Wiggins W, Shafique U, Willms K, Avesta A, Bousabarah K, Chakrabarty S, Gennaro N, Holler W, Kaur M, LaMontagne P, Lin M, Lost J, Marcus DS, Maresca R, Merkaj S, Nada A, Pedersen GC, von Reppert M, Sotiras A, Teytelboym O, Tillmans N, Westerhoff M, Youssef A, Godfrey D, Floyd S, Rauschecker A, Villanueva-Meyer J, Pflüger I, Cho J, Bendszus M, Brugnara G, Cramer J, Perez-Carillo GJG, Johnson DR, Kam A, Kwan BYM, Lai L, Lall NU, Memon F, Patro SN, Petrovic B, So TY, Thompson G, Wu L, Schrickel EB, Bansal A, Barkhof F, Besada C, Chu S, Druzgal J, Dusoi A, Farage L, Feltrin F, Fong A, Fung SH, Gray RI, Ikuta I, Iv M, Postma AA, Mahajan A, Joyner D, Krumpelman C, Letourneau-Guillon L, Lincoln CM, Maros ME, Miller E, Morón F, Nimchinsky EA, Ozsarlak O, Patel U, Rohatgi S, Saha A, Sayah A, Schwartz ED, Shih R, Shiroishi MS, Small JE, Tanwar M, Valerie J, Weinberg BD, White ML, Young R, Zohrabian VM, Azizova A, Brüßeler MMT, Fehringer P, Ghonim M, Ghonim M, Gkampenis A, Okar A, Pasquini L, Sharifi Y, Singh G, Sollmann N, Soumala T, Taherzadeh M, Yordanov N, Vollmuth P, Foltyn-Dumitru M, Malhotra A, Abayazeed AH, Dellepiane F, Lohmann P, Pérez-García VM, Elhalawani H, Al-Rubaiey S, Armindo RD, Ashraf K, Asla MM, Badawy M, Bisschop J, Lomer NB, Bukatz J, Chen J, Cimflova P, Corr F, Crawley A, Deptula L, Elakhdar T, Shawali IH, Faghani S, Frick A, Gulati V, Haider MA, Hierro F, Dahl RH, Jacobs SM, Hsieh KJ, Kandemirli SG, Kersting K, Kida L, Kollia S, Koukoulithras I, Li X, Abouelatta A, Mansour A, Maria-Zamfirescu RC, Marsiglia M, Mateo-Camacho YS, McArthur M, McDonnell O, McHugh M, Moassefi M, Morsi SM, Muntenu A, Nandolia KK, Naqvi SR, Nikanpour Y, Alnoury M, Nouh AMA, Pappafava F, Patel MD, Petrucci S, Rawie E, Raymond S, Roohani B, Sabouhi S, Sanchez-Garcia LM, Shaked Z, Suthar PP, Altes T, Isufi E, Dhermesh Y, Gass J, Thacker J, Tarabishy AR, Turner B, Vacca S, Vilanilam GK, Warren D, Weiss D, Willms K, Worede F, Yousry S, Lerebo W, Aristizabal A, Karargyris A, Kassem H, Pati S, Sheller M, Bakas S, Rudie JD, Aboian M. PMID: 37396600; PMCID: PMC10312806.
      View in: PubMed   Mentions:
    3. The Brain Tumor Segmentation (BraTS) Challenge 2023: Focus on Pediatrics (CBTN-CONNECT-DIPGR-ASNR-MICCAI BraTS-PEDs). ArXiv. 2024 May 23. Kazerooni AF, Khalili N, Liu X, Haldar D, Jiang Z, Anwar SM, Albrecht J, Adewole M, Anazodo U, Anderson H, Bagheri S, Baid U, Bergquist T, Borja AJ, Calabrese E, Chung V, Conte GM, Dako F, Eddy J, Ezhov I, Familiar A, Farahani K, Haldar S, Iglesias JE, Janas A, Johansen E, Jones BV, Kofler F, LaBella D, Lai HA, Van Leemput K, Li HB, Maleki N, McAllister AS, Meier Z, Menze B, Moawad AW, Nandolia KK, Pavaine J, Piraud M, Poussaint T, Prabhu SP, Reitman Z, Rodriguez A, Rudie JD, Shaikh IS, Shah LM, Sheth N, Shinohara RT, Tu W, Viswanathan K, Wang C, Ware JB, Wiestler B, Wiggins W, Zapaishchykova A, Aboian M, Bornhorst M, de Blank P, Deutsch M, Fouladi M, Hoffman L, Kann B, Lazow M, Mikael L, Nabavizadeh A, Packer R, Resnick A, Rood B, Vossough A, Bakas S, Linguraru MG. PMID: 37292481; PMCID: PMC10246083.
      View in: PubMed   Mentions:
    4. A multi-institutional meningioma MRI dataset for automated multi-sequence image segmentation. Sci Data. 2024 May 15; 11(1):496. LaBella D, Khanna O, McBurney-Lin S, Mclean R, Nedelec P, Rashid AS, Tahon NH, Altes T, Baid U, Bhalerao R, Dhemesh Y, Floyd S, Godfrey D, Hilal F, Janas A, Kazerooni A, Kent C, Kirkpatrick J, Kofler F, Leu K, Maleki N, Menze B, Pajot M, Reitman ZJ, Rudie JD, Saluja R, Velichko Y, Wang C, Warman PI, Sollmann N, Diffley D, Nandolia KK, Warren DI, Hussain A, Fehringer JP, Bronstein Y, Deptula L, Stein EG, Taherzadeh M, Portela de Oliveira E, Haughey A, Kontzialis M, Saba L, Turner B, Brüßeler MMT, Ansari S, Gkampenis A, Weiss DM, Mansour A, Shawali IH, Yordanov N, Stein JM, Hourani R, Moshebah MY, Abouelatta AM, Rizvi T, Willms K, Martin DC, Okar A, D'Anna G, Taha A, Sharifi Y, Faghani S, Kite D, Pinho M, Haider MA, Alonso-Basanta M, Villanueva-Meyer J, Rauschecker AM, Nada A, Aboian M, Flanders A, Bakas S, Calabrese E. PMID: 38750041; PMCID: PMC11096318.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    5. The University of California San Francisco Brain Metastases Stereotactic Radiosurgery (UCSF-BMSR) MRI Dataset. Radiol Artif Intell. 2024 Mar; 6(2):e230126. Rudie JD, Saluja R, Weiss DA, Nedelec P, Calabrese E, Colby JB, Laguna B, Mongan J, Braunstein S, Hess CP, Rauschecker AM, Sugrue LP, Villanueva-Meyer JE. PMID: 38381038; PMCID: PMC10982817.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    6. 3D U-Net for automated detection of multiple sclerosis lesions: utility of transfer learning from other pathologies. Front Neurosci. 2023; 17:1188336. Wahlig SG, Nedelec P, Weiss DA, Rudie JD, Sugrue LP, Rauschecker AM. PMID: 37965219; PMCID: PMC10641790.
      View in: PubMed   Mentions:
    7. Bayesian Networks in Radiology. Radiol Artif Intell. 2023 Nov; 5(6):e210187. Ma SX, Dhanaliwala AH, Rudie JD, Rauschecker AM, Roberts-Wolfe D, Haddawy P, Kahn CE. PMID: 38074791; PMCID: PMC10698603.
      View in: PubMed   Mentions:    Fields:    
    8. Association of partial T2-FLAIR mismatch sign and isocitrate dehydrogenase mutation in WHO grade 4 gliomas: results from the ReSPOND consortium. Neuroradiology. 2023 Sep; 65(9):1343-1352. Lee MD, Patel SH, Mohan S, Akbari H, Bakas S, Nasrallah MP, Calabrese E, Rudie J, Villanueva-Meyer J, LaMontagne P, Marcus DS, Colen RR, Balana C, Choi YS, Badve C, Barnholtz-Sloan JS, Sloan AE, Booth TC, Palmer JD, Dicker AP, Flanders AE, Shi W, Griffith B, Poisson LM, Chakravarti A, Mahajan A, Chang S, Orringer D, Davatzikos C, Jain R, ReSPOND Consortium. PMID: 37468750; PMCID: PMC11058040.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    9. The Brain Tumor Segmentation (BraTS) Challenge 2023: Brain MR Image Synthesis for Tumor Segmentation (BraSyn). ArXiv. 2023 Jun 28. Li HB, Conte GM, Anwar SM, Kofler F, Ezhov I, van Leemput K, Piraud M, Diaz M, Cole B, Calabrese E, Rudie J, Meissen F, Adewole M, Janas A, Kazerooni AF, LaBella D, Moawad AW, Farahani K, Eddy J, Bergquist T, Chung V, Shinohara RT, Dako F, Wiggins W, Reitman Z, Wang C, Liu X, Jiang Z, Familiar A, Johanson E, Meier Z, Davatzikos C, Freymann J, Kirby J, Bilello M, Fathallah-Shaykh HM, Wiest R, Kirschke J, Colen RR, Kotrotsou A, Lamontagne P, Marcus D, Milchenko M, Nazeri A, Weber MA, Mahajan A, Mohan S, Mongan J, Hess C, Cha S, Villanueva-Meyer J, Colak E, Crivellaro P, Jakab A, Albrecht J, Anazodo U, Aboian M, Yu T, Chung V, Bergquist T, Eddy J, Albrecht J, Baid U, Bakas S, Linguraru MG, Menze B, Iglesias JE, Wiestler B. PMID: 37608932; PMCID: PMC10441440.
      View in: PubMed   Mentions:
    10. The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa). ArXiv. 2023 May 30. Adewole M, Rudie JD, Gbdamosi A, Toyobo O, Raymond C, Zhang D, Omidiji O, Akinola R, Suwaid MA, Emegoakor A, Ojo N, Aguh K, Kalaiwo C, Babatunde G, Ogunleye A, Gbadamosi Y, Iorpagher K, Calabrese E, Aboian M, Linguraru M, Albrecht J, Wiestler B, Kofler F, Janas A, LaBella D, Kzerooni AF, Li HB, Iglesias JE, Farahani K, Eddy J, Bergquist T, Chung V, Shinohara RT, Wiggins W, Reitman Z, Wang C, Liu X, Jiang Z, Familiar A, Van Leemput K, Bukas C, Piraud M, Conte GM, Johansson E, Meier Z, Menze BH, Baid U, Bakas S, Dako F, Fatade A, Anazodo UC. PMID: 37396608; PMCID: PMC10312814.
      View in: PubMed   Mentions:
    11. The ASNR-MICCAI Brain Tumor Segmentation (BraTS) Challenge 2023: Intracranial Meningioma. ArXiv. 2023 May 12. LaBella D, Adewole M, Alonso-Basanta M, Altes T, Anwar SM, Baid U, Bergquist T, Bhalerao R, Chen S, Chung V, Conte GM, Dako F, Eddy J, Ezhov I, Godfrey D, Hilal F, Familiar A, Farahani K, Iglesias JE, Jiang Z, Johanson E, Kazerooni AF, Kent C, Kirkpatrick J, Kofler F, Leemput KV, Li HB, Liu X, Mahtabfar A, McBurney-Lin S, McLean R, Meier Z, Moawad AW, Mongan J, Nedelec P, Pajot M, Piraud M, Rashid A, Reitman Z, Shinohara RT, Velichko Y, Wang C, Warman P, Wiggins W, Aboian M, Albrecht J, Anazodo U, Bakas S, Flanders A, Janas A, Khanna G, Linguraru MG, Menze B, Nada A, Rauschecker AM, Rudie J, Tahon NH, Villanueva-Meyer J, Wiestler B, Calabrese E. PMID: 37608937; PMCID: PMC10441446.
      View in: PubMed   Mentions:
    12. Neuroimaging Patterns of Intracranial Infections: Meningitis, Cerebritis, and Their Complications. Neuroimaging Clin N Am. 2023 Feb; 33(1):11-41. Duong MT, Rudie JD, Mohan S. PMID: 36404039; PMCID: PMC10904173.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    13. Author Correction: Federated learning enables big data for rare cancer boundary detection. Nat Commun. 2023 Jan 26; 14(1):436. Pati S, Baid U, Edwards B, Sheller M, Wang SH, Reina GA, Foley P, Gruzdev A, Karkada D, Davatzikos C, Sako C, Ghodasara S, Bilello M, Mohan S, Vollmuth P, Brugnara G, Preetha CJ, Sahm F, Maier-Hein K, Zenk M, Bendszus M, Wick W, Calabrese E, Rudie J, Villanueva-Meyer J, Cha S, Ingalhalikar M, Jadhav M, Pandey U, Saini J, Garrett J, Larson M, Jeraj R, Currie S, Frood R, Fatania K, Huang RY, Chang K, Balaña C, Capellades J, Puig J, Trenkler J, Pichler J, Necker G, Haunschmidt A, Meckel S, Shukla G, Liem S, Alexander GS, Lombardo J, Palmer JD, Flanders AE, Dicker AP, Sair HI, Jones CK, Venkataraman A, Jiang M, So TY, Chen C, Heng PA, Dou Q, Kozubek M, Lux F, Michálek J, Matula P, Kerkovský M, Koprivová T, Dostál M, Vybíhal V, Vogelbaum MA, Mitchell JR, Farinhas J, Maldjian JA, Yogananda CGB, Pinho MC, Reddy D, Holcomb J, Wagner BC, Ellingson BM, Cloughesy TF, Raymond C, Oughourlian T, Hagiwara A, Wang C, To MS, Bhardwaj S, Chong C, Agzarian M, Falcão AX, Martins SB, Teixeira BCA, Sprenger F, Menotti D, Lucio DR, LaMontagne P, Marcus D, Wiestler B, Kofler F, Ezhov I, Metz M, Jain R, Lee M, Lui YW, McKinley R, Slotboom J, Radojewski P, Meier R, Wiest R, Murcia D, Fu E, Haas R, Thompson J, Ormond DR, Badve C, Sloan AE, Vadmal V, Waite K, Colen RR, Pei L, Ak M, Srinivasan A, Bapuraj JR, Rao A, Wang N, Yoshiaki O, Moritani T, Turk S, Lee J, Prabhudesai S, Morón F, Mandel J, Kamnitsas K, Glocker B, Dixon LVM, Williams M, Zampakis P, Panagiotopoulos V, Tsiganos P, Alexiou S, Haliassos I, Zacharaki EI, Moustakas K, Kalogeropoulou C, Kardamakis DM, Choi YS, Lee SK, Chang JH, Ahn SS, Luo B, Poisson L, Wen N, Tiwari P, Verma R, Bareja R, Yadav I, Chen J, Kumar N, Smits M, van der Voort SR, Alafandi A, Incekara F, Wijnenga MMJ, Kapsas G, Gahrmann R, Schouten JW, Dubbink HJ, Vincent AJPE, van den Bent MJ, French PJ, Klein S, Yuan Y, Sharma S, Tseng TC, Adabi S, Niclou SP, Keunen O, Hau AC, Vallières M, Fortin D, Lepage M, Landman B, Ramadass K, Xu K, Chotai S, Chambless LB, Mistry A, Thompson RC, Gusev Y, Bhuvaneshwar K, Sayah A, Bencheqroun C, Belouali A, Madhavan S, Booth TC, Chelliah A, Modat M, Shuaib H, Dragos C, Abayazeed A, Kolodziej K, Hill M, Abbassy A, Gamal S, Mekhaimar M, Qayati M, Reyes M, Park JE, Yun J, Kim HS, Mahajan A, Muzi M, Benson S, Beets-Tan RGH, Teuwen J, Herrera-Trujillo A, Trujillo M, Escobar W, Abello A, Bernal J, Gómez J, Choi J, Baek S, Kim Y, Ismael H, Allen B, Buatti JM, Kotrotsou A, Li H, Weiss T, Weller M, Bink A, Pouymayou B, Shaykh HF, Saltz J, Prasanna P, Shrestha S, Mani KM, Payne D, Kurc T, Pelaez E, Franco-Maldonado H, Loayza F, Quevedo S, Guevara P, Torche E, Mendoza C, Vera F, Ríos E, López E, Velastin SA, Ogbole G, Soneye M, Oyekunle D, Odafe-Oyibotha O, Osobu B, Shu'aibu M, Dorcas A, Dako F, Simpson AL, Hamghalam M, Peoples JJ, Hu R, Tran A, Cutler D, Moraes FY, Boss MA, Gimpel J, Veettil DK, Schmidt K, Bialecki B, Marella S, Price C, Cimino L, Apgar C, Shah P, Menze B, Barnholtz-Sloan JS, Martin J, Bakas S. PMID: 36702828; PMCID: PMC9879935.
      View in: PubMed   Mentions:    Fields:    
    14. Federated learning enables big data for rare cancer boundary detection. Nat Commun. 2022 12 05; 13(1):7346. Pati S, Baid U, Edwards B, Sheller M, Wang SH, Reina GA, Foley P, Gruzdev A, Karkada D, Davatzikos C, Sako C, Ghodasara S, Bilello M, Mohan S, Vollmuth P, Brugnara G, Preetha CJ, Sahm F, Maier-Hein K, Zenk M, Bendszus M, Wick W, Calabrese E, Rudie J, Villanueva-Meyer J, Cha S, Ingalhalikar M, Jadhav M, Pandey U, Saini J, Garrett J, Larson M, Jeraj R, Currie S, Frood R, Fatania K, Huang RY, Chang K, Balaña C, Capellades J, Puig J, Trenkler J, Pichler J, Necker G, Haunschmidt A, Meckel S, Shukla G, Liem S, Alexander GS, Lombardo J, Palmer JD, Flanders AE, Dicker AP, Sair HI, Jones CK, Venkataraman A, Jiang M, So TY, Chen C, Heng PA, Dou Q, Kozubek M, Lux F, Michálek J, Matula P, Kerkovský M, Koprivová T, Dostál M, Vybíhal V, Vogelbaum MA, Mitchell JR, Farinhas J, Maldjian JA, Yogananda CGB, Pinho MC, Reddy D, Holcomb J, Wagner BC, Ellingson BM, Cloughesy TF, Raymond C, Oughourlian T, Hagiwara A, Wang C, To MS, Bhardwaj S, Chong C, Agzarian M, Falcão AX, Martins SB, Teixeira BCA, Sprenger F, Menotti D, Lucio DR, LaMontagne P, Marcus D, Wiestler B, Kofler F, Ezhov I, Metz M, Jain R, Lee M, Lui YW, McKinley R, Slotboom J, Radojewski P, Meier R, Wiest R, Murcia D, Fu E, Haas R, Thompson J, Ormond DR, Badve C, Sloan AE, Vadmal V, Waite K, Colen RR, Pei L, Ak M, Srinivasan A, Bapuraj JR, Rao A, Wang N, Yoshiaki O, Moritani T, Turk S, Lee J, Prabhudesai S, Morón F, Mandel J, Kamnitsas K, Glocker B, Dixon LVM, Williams M, Zampakis P, Panagiotopoulos V, Tsiganos P, Alexiou S, Haliassos I, Zacharaki EI, Moustakas K, Kalogeropoulou C, Kardamakis DM, Choi YS, Lee SK, Chang JH, Ahn SS, Luo B, Poisson L, Wen N, Tiwari P, Verma R, Bareja R, Yadav I, Chen J, Kumar N, Smits M, van der Voort SR, Alafandi A, Incekara F, Wijnenga MMJ, Kapsas G, Gahrmann R, Schouten JW, Dubbink HJ, Vincent AJPE, van den Bent MJ, French PJ, Klein S, Yuan Y, Sharma S, Tseng TC, Adabi S, Niclou SP, Keunen O, Hau AC, Vallières M, Fortin D, Lepage M, Landman B, Ramadass K, Xu K, Chotai S, Chambless LB, Mistry A, Thompson RC, Gusev Y, Bhuvaneshwar K, Sayah A, Bencheqroun C, Belouali A, Madhavan S, Booth TC, Chelliah A, Modat M, Shuaib H, Dragos C, Abayazeed A, Kolodziej K, Hill M, Abbassy A, Gamal S, Mekhaimar M, Qayati M, Reyes M, Park JE, Yun J, Kim HS, Mahajan A, Muzi M, Benson S, Beets-Tan RGH, Teuwen J, Herrera-Trujillo A, Trujillo M, Escobar W, Abello A, Bernal J, Gómez J, Choi J, Baek S, Kim Y, Ismael H, Allen B, Buatti JM, Kotrotsou A, Li H, Weiss T, Weller M, Bink A, Pouymayou B, Shaykh HF, Saltz J, Prasanna P, Shrestha S, Mani KM, Payne D, Kurc T, Pelaez E, Franco-Maldonado H, Loayza F, Quevedo S, Guevara P, Torche E, Mendoza C, Vera F, Ríos E, López E, Velastin SA, Ogbole G, Soneye M, Oyekunle D, Odafe-Oyibotha O, Osobu B, Shu'aibu M, Dorcas A, Dako F, Simpson AL, Hamghalam M, Peoples JJ, Hu R, Tran A, Cutler D, Moraes FY, Boss MA, Gimpel J, Veettil DK, Schmidt K, Bialecki B, Marella S, Price C, Cimino L, Apgar C, Shah P, Menze B, Barnholtz-Sloan JS, Martin J, Bakas S. PMID: 36470898; PMCID: PMC9722782.
      View in: PubMed   Mentions: 46     Fields:    Translation:Humans
    15. The University of California San Francisco Preoperative Diffuse Glioma MRI Dataset. Radiol Artif Intell. 2022 Nov; 4(6):e220058. Calabrese E, Villanueva-Meyer JE, Rudie JD, Rauschecker AM, Baid U, Bakas S, Cha S, Mongan JT, Hess CP. PMID: 36523646; PMCID: PMC9748624.
      View in: PubMed   Mentions: 14     Fields:    
    16. Longitudinal Assessment of Posttreatment Diffuse Glioma Tissue Volumes with Three-dimensional Convolutional Neural Networks. Radiol Artif Intell. 2022 Sep; 4(5):e210243. Rudie JD, Calabrese E, Saluja R, Weiss D, Colby JB, Cha S, Hess CP, Rauschecker AM, Sugrue LP, Villanueva-Meyer JE. PMID: 36204543; PMCID: PMC9530762.
      View in: PubMed   Mentions: 6     Fields:    
    17. The University of Pennsylvania glioblastoma (UPenn-GBM) cohort: advanced MRI, clinical, genomics, & radiomics. Sci Data. 2022 07 29; 9(1):453. Bakas S, Sako C, Akbari H, Bilello M, Sotiras A, Shukla G, Rudie JD, Santamaría NF, Kazerooni AF, Pati S, Rathore S, Mamourian E, Ha SM, Parker W, Doshi J, Baid U, Bergman M, Binder ZA, Verma R, Lustig RA, Desai AS, Bagley SJ, Mourelatos Z, Morrissette J, Watt CD, Brem S, Wolf RL, Melhem ER, Nasrallah MP, Mohan S, O'Rourke DM, Davatzikos C. PMID: 35906241; PMCID: PMC9338035.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    18. Combining radiomics and deep convolutional neural network features from preoperative MRI for predicting clinically relevant genetic biomarkers in glioblastoma. Neurooncol Adv. 2022 Jan-Dec; 4(1):vdac060. Calabrese E, Rudie JD, Rauschecker AM, Villanueva-Meyer JE, Clarke JL, Solomon DA, Cha S. PMID: 35611269; PMCID: PMC9122791.
      View in: PubMed   Mentions: 18  
    19. Economic impact of selective use of contrast for routine follow-up MRI of patients with multiple sclerosis. J Neuroimaging. 2022 07; 32(4):656-666. Mattay RR, Davtyan K, Rudie JD, Mattay GS, Jacobs DA, Schindler M, Loevner LA, Schnall MD, Bilello M, Mamourian AC, Cook TS. PMID: 35294074.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    20. Clinical Assessment of Deep Learning-based Super-Resolution for 3D Volumetric Brain MRI. Radiol Artif Intell. 2022 Mar; 4(2):e210059. Rudie JD, Gleason T, Barkovich MJ, Wilson DM, Shankaranarayanan A, Zhang T, Wang L, Gong E, Zaharchuk G, Villanueva-Meyer JE. PMID: 35391765; PMCID: PMC8980882.
      View in: PubMed   Mentions: 16     Fields:    
    21. Interinstitutional Portability of a Deep Learning Brain MRI Lesion Segmentation Algorithm. Radiol Artif Intell. 2022 Jan; 4(1):e200152. Rauschecker AM, Gleason TJ, Nedelec P, Duong MT, Weiss DA, Calabrese E, Colby JB, Sugrue LP, Rudie JD, Hess CP. PMID: 35146430; PMCID: PMC8823451.
      View in: PubMed   Mentions: 12     Fields:    
    22. Automated multiclass tissue segmentation of clinical brain MRIs with lesions. Neuroimage Clin. 2021; 31:102769. Weiss DA, Saluja R, Xie L, Gee JC, Sugrue LP, Pradhan A, Nick Bryan R, Rauschecker AM, Rudie JD. PMID: 34333270; PMCID: PMC8346689.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    23. Brain MRI Deep Learning and Bayesian Inference System Augments Radiology Resident Performance. J Digit Imaging. 2021 08; 34(4):1049-1058. Rudie JD, Duda J, Duong MT, Chen PH, Xie L, Kurtz R, Ware JB, Choi J, Mattay RR, Botzolakis EJ, Gee JC, Bryan RN, Cook TS, Mohan S, Nasrallah IM, Rauschecker AM. PMID: 34131794; PMCID: PMC8455800.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    24. Feasibility of Simulated Postcontrast MRI of Glioblastomas and Lower-Grade Gliomas by Using Three-dimensional Fully Convolutional Neural Networks. Radiol Artif Intell. 2021 Sep; 3(5):e200276. Calabrese E, Rudie JD, Rauschecker AM, Villanueva-Meyer JE, Cha S. PMID: 34617027; PMCID: PMC8489450.
      View in: PubMed   Mentions: 8     Fields:    
    25. Rates of Incidental Findings in Brain Magnetic Resonance Imaging in Children. JAMA Neurol. 2021 05 01; 78(5):578-587. Li Y, Thompson WK, Reuter C, Nillo R, Jernigan T, Dale A, Sugrue LP, ABCD Consortium, Brown J, Dougherty RF, Rauschecker A, Rudie J, Barch DM, Calhoun V, Hagler D, Hatton S, Tanabe J, Marshall A, Sher KJ, Heeringa S, Hermosillo R, Banich MT, Squeglia L, Bjork J, Zucker R, Neale M, Herting M, Sheth C, Huber R, Reeves G, Hettema JM, Howlett KD, Cloak C, Baskin-Sommers A, Rapuano K, Gonzalez R, Karcher N, Laird A, Baker F, James R, Sowell E, Dick A, Hawes S, Sutherland M, Bagot K, Bodurka J, Breslin F, Morris A, Paulus M, Gray K, Hoffman E, Weiss S, Rajapakse N, Glantz M, Nagel B, Ewing SF, Goldstone A, Pfefferbaum A, Prouty D, Rosenberg M, Bookheimer S, Tapert S, Infante M, Jacobus J, Giedd J, Shilling P, Wade N, Uban K, Haist F, Heyser C, Palmer C, Kuperman J, Hewitt J, Cottler L, Isaiah A, Chang L, Edwards S, Ernst T, Heitzeg M, Puttler L, Sripada C, Iacono W, Luciana M, Clark D, Luna B, Schirda C, Foxe J, Freedman E, Mason M, McGlade E, Renshaw P, Yurgelun-Todd D, Albaugh M, Allgaier N, Chaarani B, Potter A, Ivanova M, Lisdahl K, Do E, Maes H, Bogdan R, Anokhin A, Dosenbach N, Glaser P, Heath A, Casey BJ, Gee D, Garavan HP, Dowling G, Brown S. PMID: 33749724; PMCID: PMC7985817.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    26. Three-dimensional U-Net Convolutional Neural Network for Detection and Segmentation of Intracranial Metastases. Radiol Artif Intell. 2021 May; 3(3):e200204. Rudie JD, Weiss DA, Colby JB, Rauschecker AM, Laguna B, Braunstein S, Sugrue LP, Hess CP, Villanueva-Meyer JE. PMID: 34136817; PMCID: PMC8204134.
      View in: PubMed   Mentions: 19     Fields:    
    27. Subspecialty-Level Deep Gray Matter Differential Diagnoses with Deep Learning and Bayesian Networks on Clinical Brain MRI: A Pilot Study. Radiol Artif Intell. 2020 Sep; 2(5):e190146. Rudie JD, Rauschecker AM, Xie L, Wang J, Duong MT, Botzolakis EJ, Kovalovich A, Egan JM, Cook T, Bryan RN, Nasrallah IM, Mohan S, Gee JC. PMID: 33937838; PMCID: PMC8082339.
      View in: PubMed   Mentions: 10     Fields:    
    28. Artificial Intelligence System Approaching Neuroradiologist-level Differential Diagnosis Accuracy at Brain MRI. Radiology. 2020 06; 295(3):626-637. Rauschecker AM, Rudie JD, Xie L, Wang J, Duong MT, Botzolakis EJ, Kovalovich AM, Egan J, Cook TC, Bryan RN, Nasrallah IM, Mohan S, Gee JC. PMID: 32255417; PMCID: PMC7263320.
      View in: PubMed   Mentions: 46     Fields:    Translation:Humans
    29. Histopathology-validated machine learning radiographic biomarker for noninvasive discrimination between true progression and pseudo-progression in glioblastoma. Cancer. 2020 06 01; 126(11):2625-2636. Akbari H, Rathore S, Bakas S, Nasrallah MP, Shukla G, Mamourian E, Rozycki M, Bagley SJ, Rudie JD, Flanders AE, Dicker AP, Desai AS, O'Rourke DM, Brem S, Lustig R, Mohan S, Wolf RL, Bilello M, Martinez-Lage M, Davatzikos C. PMID: 32129893; PMCID: PMC7893811.
      View in: PubMed   Mentions: 42     Fields:    Translation:Humans
    30. Cancer Imaging Phenomics via CaPTk: Multi-Institutional Prediction of Progression-Free Survival and Pattern of Recurrence in Glioblastoma. JCO Clin Cancer Inform. 2020 03; 4:234-244. Fathi Kazerooni A, Akbari H, Shukla G, Badve C, Rudie JD, Sako C, Rathore S, Bakas S, Pati S, Singh A, Bergman M, Ha SM, Kontos D, Nasrallah M, Bagley SJ, Lustig RA, O'Rourke DM, Sloan AE, Barnholtz-Sloan JS, Mohan S, Bilello M, Davatzikos C. PMID: 32191542; PMCID: PMC7113126.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    31. Medical Image Analysis: Human and Machine. Acad Radiol. 2020 01; 27(1):76-81. Bryan RN, Davatzikos C, Herskovits EH, Mohan S, Rudie JD, Rauschecker AM. PMID: 31818388; PMCID: PMC7895494.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    32. Multi-Disease Segmentation of Gliomas and White Matter Hyperintensities in the BraTS Data Using a 3D Convolutional Neural Network. Front Comput Neurosci. 2019; 13:84. Rudie JD, Weiss DA, Saluja R, Rauschecker AM, Wang J, Sugrue L, Bakas S, Colby JB. PMID: 31920609; PMCID: PMC6933520.
      View in: PubMed   Mentions: 13  
    33. Multivariate Analysis of Preoperative Magnetic Resonance Imaging Reveals Transcriptomic Classification of de novo Glioblastoma Patients. Front Comput Neurosci. 2019; 13:81. Rathore S, Akbari H, Bakas S, Pisapia JM, Shukla G, Rudie JD, Da X, Davuluri RV, Dahmane N, O'Rourke DM, Davatzikos C. PMID: 31920606; PMCID: PMC6923885.
      View in: PubMed   Mentions: 3  
    34. Artificial intelligence for precision education in radiology. Br J Radiol. 2019 Nov; 92(1103):20190389. Duong MT, Rauschecker AM, Rudie JD, Chen PH, Cook TS, Bryan RN, Mohan S. PMID: 31322909; PMCID: PMC6849670.
      View in: PubMed   Mentions: 43     Fields:    Translation:Humans
    35. An Initiative to Reduce Unnecessary Gadolinium-Based Contrast in Multiple Sclerosis Patients. J Am Coll Radiol. 2019 Sep; 16(9 Pt A):1158-1164. Rudie JD, Mattay RR, Schindler M, Steingall S, Cook TS, Loevner LA, Schnall MD, Mamourian AC, Bilello M. PMID: 31092348; PMCID: PMC6732018.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    36. A Roadmap for Foundational Research on Artificial Intelligence in Medical Imaging: From the 2018 NIH/RSNA/ACR/The Academy Workshop. Radiology. 2019 06; 291(3):781-791. Langlotz CP, Allen B, Erickson BJ, Kalpathy-Cramer J, Bigelow K, Cook TS, Flanders AE, Lungren MP, Mendelson DS, Rudie JD, Wang G, Kandarpa K. PMID: 30990384; PMCID: PMC6542624.
      View in: PubMed   Mentions: 105     Fields:    Translation:Humans
    37. Emerging Applications of Artificial Intelligence in Neuro-Oncology. Radiology. 2019 03; 290(3):607-618. Rudie JD, Rauschecker AM, Bryan RN, Davatzikos C, Mohan S. PMID: 30667332; PMCID: PMC6389268.
      View in: PubMed   Mentions: 86     Fields:    Translation:Humans
    38. Neuroimaging of Dilated Perivascular Spaces: From Benign and Pathologic Causes to Mimics. J Neuroimaging. 2018 03; 28(2):139-149. Rudie JD, Rauschecker AM, Nabavizadeh SA, Mohan S. PMID: 29280227; PMCID: PMC6398334.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    39. Machine learning classification of mesial temporal sclerosis in epilepsy patients. Epilepsy Res. 2015 Nov; 117:63-9. Rudie JD, Colby JB, Salamon N. PMID: 26421492.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    40. Development of the default mode and central executive networks across early adolescence: a longitudinal study. Dev Cogn Neurosci. 2014 Oct; 10:148-59. Sherman LE, Rudie JD, Pfeifer JH, Masten CL, McNealy K, Dapretto M. PMID: 25282602; PMCID: PMC4854607.
      View in: PubMed   Mentions: 124     Fields:    Translation:Humans
    41. Neural signatures of autism spectrum disorders: insights into brain network dynamics. Neuropsychopharmacology. 2015 Jan; 40(1):171-89. Hernandez LM, Rudie JD, Green SA, Bookheimer S, Dapretto M. PMID: 25011468; PMCID: PMC4262896.
      View in: PubMed   Mentions: 58     Fields:    Translation:Humans
    42. Convergent evidence of brain overconnectivity in children with autism? Cell Rep. 2013 Nov 14; 5(3):565-6. Rudie JD, Dapretto M. PMID: 24238089; PMCID: PMC6396279.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    43. Overreactive brain responses to sensory stimuli in youth with autism spectrum disorders. J Am Acad Child Adolesc Psychiatry. 2013 Nov; 52(11):1158-72. Green SA, Rudie JD, Colich NL, Wood JJ, Shirinyan D, Hernandez L, Tottenham N, Dapretto M, Bookheimer SY. PMID: 24157390; PMCID: PMC3820504.
      View in: PubMed   Mentions: 93     Fields:    Translation:Humans
    44. Neural and behavioral responses during self-evaluative processes differ in youth with and without autism. J Autism Dev Disord. 2013 Feb; 43(2):272-85. Pfeifer JH, Merchant JS, Colich NL, Hernandez LM, Rudie JD, Dapretto M. PMID: 22760337; PMCID: PMC3507334.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    45. The UCLA multimodal connectivity database: a web-based platform for brain connectivity matrix sharing and analysis. Front Neuroinform. 2012; 6:28. Brown JA, Rudie JD, Bandrowski A, Van Horn JD, Bookheimer SY. PMID: 23226127; PMCID: PMC3508475.
      View in: PubMed   Mentions: 54  
    46. Autism-associated promoter variant in MET impacts functional and structural brain networks. Neuron. 2012 Sep 06; 75(5):904-15. Rudie JD, Hernandez LM, Brown JA, Beck-Pancer D, Colich NL, Gorrindo P, Thompson PM, Geschwind DH, Bookheimer SY, Levitt P, Dapretto M. PMID: 22958829; PMCID: PMC3454529.
      View in: PubMed   Mentions: 91     Fields:    Translation:HumansCells
    47. Insights into multimodal imaging classification of ADHD. Front Syst Neurosci. 2012; 6:59. Colby JB, Rudie JD, Brown JA, Douglas PK, Cohen MS, Shehzad Z. PMID: 22912605; PMCID: PMC3419970.
      View in: PubMed   Mentions: 68  
    48. Regional fMRI hypoactivation and altered functional connectivity during emotion processing in nonmedicated depressed patients with bipolar II disorder. Am J Psychiatry. 2012 Aug; 169(8):831-40. Vizueta N, Rudie JD, Townsend JD, Torrisi S, Moody TD, Bookheimer SY, Altshuler LL. PMID: 22773540; PMCID: PMC3740182.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    49. Frontostriatal connectivity in children during working memory and the effects of prenatal methamphetamine, alcohol, and polydrug exposure. Dev Neurosci. 2012; 34(1):43-57. Roussotte FF, Rudie JD, Smith L, O'Connor MJ, Bookheimer SY, Narr KL, Sowell ER. PMID: 22472800.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    50. Atypical Neural Processing of Ironic and Sincere Remarks in Children and Adolescents with Autism Spectrum Disorders. Metaphor Symb. 2012; 27(1):70-92. Colich NL, Wang AT, Rudie JD, Hernandez LM, Bookheimer SY, Dapretto M. PMID: 24497750; PMCID: PMC3909704.
      View in: PubMed   Mentions: 21  
    51. Reduced functional integration and segregation of distributed neural systems underlying social and emotional information processing in autism spectrum disorders. Cereb Cortex. 2012 May; 22(5):1025-37. Rudie JD, Shehzad Z, Hernandez LM, Colich NL, Bookheimer SY, Iacoboni M, Dapretto M. PMID: 21784971; PMCID: PMC3328339.
      View in: PubMed   Mentions: 101     Fields:    Translation:Humans
    52. An fMRI investigation of responses to peer rejection in adolescents with autism spectrum disorders. Dev Cogn Neurosci. 2011 Jul; 1(3):260-70. Masten CL, Colich NL, Rudie JD, Bookheimer SY, Eisenberger NI, Dapretto M. PMID: 22318914; PMCID: PMC3272329.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    53. Altered structural brain connectivity in healthy carriers of the autism risk gene, CNTNAP2. Brain Connect. 2011; 1(6):447-59. Dennis EL, Jahanshad N, Rudie JD, Brown JA, Johnson K, McMahon KL, de Zubicaray GI, Montgomery G, Martin NG, Wright MJ, Bookheimer SY, Dapretto M, Toga AW, Thompson PM. PMID: 22500773; PMCID: PMC3420970.
      View in: PubMed   Mentions: 54     Fields:    Translation:Humans
    54. Altered functional connectivity in frontal lobe circuits is associated with variation in the autism risk gene CNTNAP2. Sci Transl Med. 2010 Nov 03; 2(56):56ra80. Scott-Van Zeeland AA, Abrahams BS, Alvarez-Retuerto AI, Sonnenblick LI, Rudie JD, Ghahremani D, Mumford JA, Poldrack RA, Dapretto M, Geschwind DH, Bookheimer SY. PMID: 21048216; PMCID: PMC3065863.
      View in: PubMed   Mentions: 123     Fields:    Translation:Humans
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