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Garcia-Bassets, Ivan

Title(s)Associate Research Scientist, Medicine
SchoolHealth Sciences
Address9500 Gilman Drive #0648
La Jolla CA 92093
Phone858-534-6936
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Super-Enhancer Redistribution as a Mechanism of Broad Gene Dysregulation in Repeatedly Drug-Treated Cancer Cells. Cell Rep. 2020 Apr 21; 31(3):107532. Ma Q, Yang F, Mackintosh C, Jayani RS, Oh S, Jin C, Nair SJ, Merkurjev D, Ma W, Allen S, Wang D, Almenar-Queralt A, Garcia-Bassets I. PMID: 32320655.
      View in: PubMed   Mentions:    Fields:    
    2. Tissue-specific transcription reprogramming promotes liver metastasis of colorectal cancer. Cell Res. 2020 01; 30(1):34-49. Teng S, Li YE, Yang M, Qi R, Huang Y, Wang Q, Zhang Y, Chen S, Li S, Lin K, Cao Y, Ji Q, Gu Q, Cheng Y, Chang Z, Guo W, Wang P, Garcia-Bassets I, Lu ZJ, Wang D. PMID: 31811277.
      View in: PubMed   Mentions:    Fields:    
    3. Chromatin establishes an immature version of neuronal protocadherin selection during the naive-to-primed conversion of pluripotent stem cells. Nat Genet. 2019 12; 51(12):1691-1701. Almenar-Queralt A, Merkurjev D, Kim HS, Navarro M, Ma Q, Chaves RS, Allegue C, Driscoll SP, Chen AG, Kohlnhofer B, Fong LK, Woodruff G, Mackintosh C, Bohaciakova D, Hruska-Plochan M, Tadokoro T, Young JE, El Hajj N, Dittrich M, Marsala M, Goldstein LSB, Garcia-Bassets I. PMID: 31740836.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    4. Transcriptional regulation of the sodium channel gene (SCN5A) by GATA4 in human heart. J Mol Cell Cardiol. 2017 01; 102:74-82. Tarradas A, Pinsach-Abuin ML, Mackintosh C, Llorà-Batlle O, Pérez-Serra A, Batlle M, Pérez-Villa F, Zimmer T, Garcia-Bassets I, Brugada R, Beltran-Alvarez P, Pagans S. PMID: 27894866.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    5. dDsk2 regulates H2Bub1 and RNA polymerase II pausing at dHP1c complex target genes. Nat Commun. 2015 Apr 28; 6:7049. Kessler R, Tisserand J, Font-Burgada J, Reina O, Coch L, Attolini CS, Garcia-Bassets I, Azorín F. PMID: 25916810.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    6. Decoding a signature-based model of transcription cofactor recruitment dictated by cardinal cis-regulatory elements in proximal promoter regions. PLoS Genet. 2013 Nov; 9(11):e1003906. Benner C, Konovalov S, Mackintosh C, Hutt KR, Stunnenberg R, Garcia-Bassets I. PMID: 24244184.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    7. Analysis of the levels of lysine-specific demethylase 1 (LSD1) mRNA in human ovarian tumors and the effects of chemical LSD1 inhibitors in ovarian cancer cell lines. J Ovarian Res. 2013 Oct 29; 6(1):75. Konovalov S, Garcia-Bassets I. PMID: 24165091.
      View in: PubMed   Mentions: 16     Fields:    
    8. Presenilins regulate neurotrypsin gene expression and neurotrypsin-dependent agrin cleavage via cyclic AMP response element-binding protein (CREB) modulation. J Biol Chem. 2013 Dec 06; 288(49):35222-36. Almenar-Queralt A, Kim SN, Benner C, Herrera CM, Kang DE, Garcia-Bassets I, Goldstein LS. PMID: 24145027.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    9. "Seq-ing" insights into the epigenetics of neuronal gene regulation. Neuron. 2013 Feb 20; 77(4):606-23. Telese F, Gamliel A, Skowronska-Krawczyk D, Garcia-Bassets I, Rosenfeld MG. PMID: 23439116.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    10. Cistrome plasticity and mechanisms of cistrome reprogramming. Cell Cycle. 2012 Sep 01; 11(17):3199-210. Garcia-Bassets I, Wang D. PMID: 22895178.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    11. Mechanisms establishing TLR4-responsive activation states of inflammatory response genes. PLoS Genet. 2011 Dec; 7(12):e1002401. Escoubet-Lozach L, Benner C, Kaikkonen MU, Lozach J, Heinz S, Spann NJ, Crotti A, Stender J, Ghisletti S, Reichart D, Cheng CS, Luna R, Ludka C, Sasik R, Garcia-Bassets I, Hoffmann A, Subramaniam S, Hardiman G, Rosenfeld MG, Glass CK. PMID: 22174696.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansAnimalsCells
    12. Role of reputation in top pediatric specialties rankings. Pediatrics. 2011 Dec; 128(6):1168-72. Bush RA, Quigley EJ, Fox L, Garcia-Bassets I. PMID: 22123878.
      View in: PubMed   Mentions: 3     Fields:    
    13. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature. 2011 May 15; 474(7351):390-4. Wang D, Garcia-Bassets I, Benner C, Li W, Su X, Zhou Y, Qiu J, Liu W, Kaikkonen MU, Ohgi KA, Glass CK, Rosenfeld MG, Fu XD. PMID: 21572438.
      View in: PubMed   Mentions: 370     Fields:    Translation:HumansCells
    14. PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progression. Nature. 2010 Jul 22; 466(7305):508-12. Liu W, Tanasa B, Tyurina OV, Zhou TY, Gassmann R, Liu WT, Ohgi KA, Benner C, Garcia-Bassets I, Aggarwal AK, Desai A, Dorrestein PC, Glass CK, Rosenfeld MG. PMID: 20622854.
      View in: PubMed   Mentions: 162     Fields:    Translation:HumansCells
    15. Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules. Proc Natl Acad Sci U S A. 2008 12 09; 105(49):19199-204. Hu Q, Kwon YS, Nunez E, Cardamone MD, Hutt KR, Ohgi KA, Garcia-Bassets I, Rose DW, Glass CK, Rosenfeld MG, Fu XD. PMID: 19052240.
      View in: PubMed   Mentions: 123     Fields:    Translation:HumansCells
    16. Nuclear receptor-enhanced transcription requires motor- and LSD1-dependent gene networking in interchromatin granules. Cell. 2008 Jul 11; 134(1):189. Nunez E, Kwon YS, Hutt KR, Hu Q, Cardamone MD, Ohgi KA, Garcia-Bassets I, Rose DW, Glass CK, Rosenfeld MG, Fu XD. PMID: 18630350.
      View in: PubMed   Mentions: 3     Fields:    
    17. Opposing LSD1 complexes function in developmental gene activation and repression programmes. Nature. 2007 Apr 19; 446(7138):882-7. Wang J, Scully K, Zhu X, Cai L, Zhang J, Prefontaine GG, Krones A, Ohgi KA, Zhu P, Garcia-Bassets I, Liu F, Taylor H, Lozach J, Jayes FL, Korach KS, Glass CK, Fu XD, Rosenfeld MG. PMID: 17392792.
      View in: PubMed   Mentions: 236     Fields:    Translation:AnimalsCells
    18. Sensitive ChIP-DSL technology reveals an extensive estrogen receptor alpha-binding program on human gene promoters. Proc Natl Acad Sci U S A. 2007 Mar 20; 104(12):4852-7. Kwon YS, Garcia-Bassets I, Hutt KR, Cheng CS, Jin M, Liu D, Benner C, Wang D, Ye Z, Bibikova M, Fan JB, Duan L, Glass CK, Rosenfeld MG, Fu XD. PMID: 17360330.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansCells
    19. Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors. Cell. 2007 Feb 09; 128(3):505-518. Garcia-Bassets I, Kwon YS, Telese F, Prefontaine GG, Hutt KR, Cheng CS, Ju BG, Ohgi KA, Wang J, Escoubet-Lozach L, Rose DW, Glass CK, Fu XD, Rosenfeld MG. PMID: 17289570.
      View in: PubMed   Mentions: 193     Fields:    Translation:HumansCells
    20. Drosophila dSAP18 is a nuclear protein that associates with chromosomes and the nuclear matrix, and interacts with pinin, a protein factor involved in RNA splicing. Chromosome Res. 2006; 14(5):515-26. Costa E, Canudas S, Garcia-Bassets I, Pérez S, Fernández I, Giralt E, Azorín F, Espinás ML. PMID: 16823614.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    21. A topoisomerase IIbeta-mediated dsDNA break required for regulated transcription. Science. 2006 Jun 23; 312(5781):1798-802. Ju BG, Lunyak VV, Perissi V, Garcia-Bassets I, Rose DW, Glass CK, Rosenfeld MG. PMID: 16794079.
      View in: PubMed   Mentions: 301     Fields:    Translation:HumansCells
    22. Mnt-deficient mammary glands exhibit impaired involution and tumors with characteristics of myc overexpression. Cancer Res. 2006 Jun 01; 66(11):5565-73. Toyo-oka K, Bowen TJ, Hirotsune S, Li Z, Jain S, Ota S, Escoubet-Lozach L, Lozach LE, Garcia-Bassets I, Bassett IG, Lozach J, Rosenfeld MG, Glass CK, Eisenman R, Ren B, Hurlin P, Wynshaw-Boris A. PMID: 16740691.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    23. Macrophage/cancer cell interactions mediate hormone resistance by a nuclear receptor derepression pathway. Cell. 2006 Feb 10; 124(3):615-29. Zhu P, Baek SH, Bourk EM, Ohgi KA, Garcia-Bassets I, Sanjo H, Akira S, Kotol PF, Glass CK, Rosenfeld MG, Rose DW. PMID: 16469706.
      View in: PubMed   Mentions: 107     Fields:    Translation:HumansAnimalsCells
    24. The identification of nuclear proteins that bind the homopyrimidine strand of d(GA.TC)n DNA sequences, but not the homopurine strand. Nucleic Acids Res. 1999 Aug 15; 27(16):3267-75. García-Bassets I, Ortiz-Lombardía M, Pagans S, Romero A, Canals F, Avil s FX, Azorín F. PMID: 10454633.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    25. The interaction of zinc(II) ions with antiparallel-stranded d(GA)n DNA homoduplexes. J Biomol Struct Dyn. 1998 Oct; 16(2):243-51. Ortiz-Lombardía M, Jiménez-García E, García-Bassets I, Azorín F. PMID: 9833664.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
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