Loading...

Yana Safonova

Title(s)Postdoctoral Scholar, Qualcomm Institute
SchoolResearch
Address9500 Gilman Drive #0436
La Jolla CA 92093
Phone000-000-NULL
vCardDownload vCard

    Collapse Biography 
    Collapse Awards and Honors
    2019AAI Intersect Fellowship for Computational Scientists and Immunologists

    Collapse Overview 

    Collapse ORNG Applications 
    Collapse In The News
    Collapse Twitter

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. V(DD)J recombination is an important and evolutionary conserved mechanism for generating antibodies with unusually long CDR3s. Genome Res. 2020 Sep 18. Safonova Y, Pevzner PA. PMID: 32948615.
      View in: PubMed   Mentions:    Fields:    
    2. Automated analysis of immunosequencing datasets reveals novel immunoglobulin D genes across diverse species. PLoS Comput Biol. 2020 04; 16(4):e1007837. Bhardwaj V, Franceschetti M, Rao R, Pevzner PA, Safonova Y. PMID: 32339161.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    3. De novo Inference of Diversity Genes and Analysis of Non-canonical V(DD)J Recombination in Immunoglobulins. Front Immunol. 2019; 10:987. Safonova Y, Pevzner PA. PMID: 31134072.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    4. Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Reads. J Immunol. 2017 11 01; 199(9):3369-3380. Shlemov A, Bankevich S, Bzikadze A, Turchaninova MA, Safonova Y, Pevzner PA. PMID: 28978691.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimals
    5. Extraordinary Genetic Diversity in a Wood Decay Mushroom. Mol Biol Evol. 2015 Oct; 32(10):2775-83. Baranova MA, Logacheva MD, Penin AA, Seplyarskiy VB, Safonova YY, Naumenko SA, Klepikova AV, Gerasimov ES, Bazykin GA, James TY, Kondrashov AS. PMID: 26163667.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    6. IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis. Bioinformatics. 2015 Jun 15; 31(12):i53-61. Safonova Y, Bonissone S, Kurpilyansky E, Starostina E, Lapidus A, Stinson J, DePalatis L, Sandoval W, Lill J, Pevzner PA. PMID: 26072509.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    7. IgSimulator: a versatile immunosequencing simulator. Bioinformatics. 2015 Oct 01; 31(19):3213-5. Safonova Y, Lapidus A, Lill J. PMID: 26007226.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    8. dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes. J Comput Biol. 2015 Jun; 22(6):528-45. Safonova Y, Bankevich A, Pevzner PA. PMID: 25734602.
      View in: PubMed   Mentions: 15     Fields:    
    Yana's Networks
    Concepts (30)
    Derived automatically from this person's publications.
    _
    Co-Authors (3)
    People in Profiles who have published with this person.
    _
    Similar People (60)
    People who share similar concepts with this person.
    _
    Same Department
    Search Department
    _