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Douglas Berg

Title(s)Adjunct Professor, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #0711
La Jolla CA 92093
Phone8/8-22--5320
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    NOVEL TRANSPOSONS AND PLASTICITY ZONES OF HELICOBACTER PYLORI
    NIH/NIAID R21AI088337Mar 5, 2010 - Feb 29, 2012
    Role: Principal Investigator
    HELICOBACTER PYLORI GENOME SEQUENCE EVOLUTION
    NIH/NIAID R21AI078237Sep 26, 2009 - Aug 31, 2011
    Role: Principal Investigator
    GENETICS OF POLYPHOSPHATE METABOLISM IN H. PYLORI
    NIH/NIAID R03AI057826Dec 15, 2003 - Nov 30, 2005
    Role: Principal Investigator
    H.PYLORI POPULATION GENETICS AND GENOME EVOLUTION
    NIH/NIDDK R01DK063041Jun 1, 2003 - May 31, 2009
    Role: Principal Investigator
    Molecular Genetics of H. Pylori In India
    NIH/NIAID R03AI049161Sep 1, 2000 - Jan 31, 2003
    Role: Principal Investigator
    H. PYLORI INFECTION AND GI DISEASE IN ALASKA NATIVES
    NIH/NIDDK R01DK053727Sep 30, 1999 - Sep 29, 2004
    Role: Principal Investigator
    H PYLORI INFECTION AND DRUG RESISTANCE IN PERU
    NIH/FIC R03TW000611May 1, 1996 - Apr 30, 1999
    Role: Principal Investigator
    TRANSPOSON-BASED MAPPING AND SEQUENCING OF UREAPLASMA
    NIH/NHGRI R01HG000820Sep 1, 1995 - Aug 31, 1999
    Role: Principal Investigator
    DRUG RESISTANCE AND GENE TRANSFER IN H PYLORI
    NIH/NIAID R01AI038166Jan 1, 1995 - Jun 30, 2004
    Role: Principal Investigator
    VIRULENCE ASSOCIATED HELICOBACTER PYLORI GENES
    NIH/NIDDK R01DK048029Apr 14, 1994 - Mar 31, 1999
    Role: Principal Investigator
    GENOME ANALYSIS WITH STRONG BINDING OLIGONUCLEOTIDES
    NIH/FIC R03TW000039Feb 20, 1992 - Feb 19, 1996
    Role: Principal Investigator
    ANALYSIS OF THE ESSENTIAL GENES OF E COLI
    NIH/NHGRI R01HG000563Apr 1, 1991 - Mar 31, 1994
    Role: Principal Investigator
    TRANSPOSABLE ELEMENTS IN BACTERIA
    NIH/NIGMS R01GM037138Dec 1, 1985 - Nov 30, 1991
    Role: Principal Investigator
    TRANSPOSABLE ELEMENTS IN BACTERIA
    NIH/NIAID R01AI014267Aug 1, 1977 - Mar 31, 1986
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Recombination-independent rapid convergent evolution of the gastric pathogen Helicobacter pylori. BMC Genomics. 2018 Nov 21; 19(1):835. Chattopadhyay S, Chi PB, Minin VN, Berg DE, Sokurenko EV. PMID: 30463511.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    2. Early detection of gastric cancer using global, genome-wide and IRF4, ELMO1, CLIP4 and MSC DNA methylation in endoscopic biopsies. Oncotarget. 2017 Jun 13; 8(24):38501-38516. Pirini F, Noazin S, Jahuira-Arias MH, Rodriguez-Torres S, Friess L, Michailidi C, Cok J, Combe J, Vargas G, Prado W, Soudry E, Pérez J, Yudin T, Mancinelli A, Unger H, Ili-Gangas C, Brebi-Mieville P, Berg DE, Hayashi M, Sidransky D, Gilman RH, Guerrero-Preston R. PMID: 28418867.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCellsCTClinical Trials
    3. Helicobacter pylori Adapts to Chronic Infection and Gastric Disease via pH-Responsive BabA-Mediated Adherence. Cell Host Microbe. 2017 Mar 08; 21(3):376-389. Bugaytsova JA, Björnham O, Chernov YA, Gideonsson P, Henriksson S, Mendez M, Sjöström R, Mahdavi J, Shevtsova A, Ilver D, Moonens K, Quintana-Hayashi MP, Moskalenko R, Aisenbrey C, Bylund G, Schmidt A, Åberg A, Brännström K, Königer V, Vikström S, Rakhimova L, Hofer A, Ögren J, Liu H, Goldman MD, Whitmire JM, Ådén J, Younson J, Kelly CG, Gilman RH, Chowdhury A, Mukhopadhyay AK, Nair GB, Papadakos KS, Martinez-Gonzalez B, Sgouras DN, Engstrand L, Unemo M, Danielsson D, Suerbaum S, Oscarson S, Morozova-Roche LA, Olofsson A, Gröbner G, Holgersson J, Esberg A, Strömberg N, Landström M, Eldridge AM, Chromy BA, Hansen LM, Solnick JV, Lindén SK, Haas R, Dubois A, Merrell DS, Schedin S, Remaut H, Arnqvist A, Berg DE, Borén T. PMID: 28279347.
      View in: PubMed   Mentions: 19     Fields:    Translation:Cells
    4. Population genetics of immune-related multilocus copy number variation in Native Americans. J R Soc Interface. 2017 03; 14(128). Zuccherato LW, Schneider S, Tarazona-Santos E, Hardwick RJ, Berg DE, Bogle H, Gouveia MH, Machado LR, Machado M, Rodrigues-Soares F, Soares-Souza GB, Togni DL, Zamudio R, Gilman RH, Duarte D, Hollox EJ, Rodrigues MR. PMID: 28356540.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    5. Julian Davies and the discovery of kanamycin resistance transposon Tn5. J Antibiot (Tokyo). 2017 Apr; 70(4):339-346. Berg DE. PMID: 27731334.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    6. Interconnected microbiomes and resistomes in low-income human habitats. Nature. 2016 05 12; 533(7602):212-6. Pehrsson EC, Tsukayama P, Patel S, Mejía-Bautista M, Sosa-Soto G, Navarrete KM, Calderon M, Cabrera L, Hoyos-Arango W, Bertoli MT, Berg DE, Gilman RH, Dantas G. PMID: 27172044.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansCellsPHPublic Health
    7. Grete Kellenberger-Gujer: Molecular biology research pioneer. Bacteriophage. 2016 Apr-Jun; 6(2):e1148805. Citi S, Berg DE. PMID: 27607140.
      View in: PubMed   Mentions:
    8. What Makes a Bacterial Species Pathogenic?:Comparative Genomic Analysis of the Genus Leptospira. PLoS Negl Trop Dis. 2016 Feb; 10(2):e0004403. Fouts DE, Matthias MA, Adhikarla H, Adler B, Amorim-Santos L, Berg DE, Bulach D, Buschiazzo A, Chang YF, Galloway RL, Haake DA, Haft DH, Hartskeerl R, Ko AI, Levett PN, Matsunaga J, Mechaly AE, Monk JM, Nascimento AL, Nelson KE, Palsson B, Peacock SJ, Picardeau M, Ricaldi JN, Thaipandungpanit J, Wunder EA, Yang XF, Zhang JJ, Vinetz JM. PMID: 26890609.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansAnimalsCells
    9. Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori. Cell Host Microbe. 2016 Jan 13; 19(1):55-66. Moonens K, Gideonsson P, Subedi S, Bugaytsova J, Romaõ E, Mendez M, Nordén J, Fallah M, Rakhimova L, Shevtsova A, Lahmann M, Castaldo G, Brännström K, Coppens F, Lo AW, Ny T, Solnick JV, Vandenbussche G, Oscarson S, Hammarström L, Arnqvist A, Berg DE, Muyldermans S, Borén T, Remaut H. PMID: 26764597.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    10. Population, Epidemiological, and Functional Genetics of Gastric Cancer Candidate Genes in Peruvians with Predominant Amerindian Ancestry. Dig Dis Sci. 2016 Jan; 61(1):107-16. Zamudio R, Pereira L, Rocha CD, Berg DE, Muniz-Queiroz T, Sant Anna HP, Cabrera L, Combe JM, Herrera P, Jahuira MH, Leão FB, Lyon F, Prado WA, Rodrigues MR, Rodrigues-Soares F, Santolalla ML, Zolini C, Silva AM, Gilman RH, Tarazona-Santos E, Kehdy FS. PMID: 26391267.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    11. Origin and dynamics of admixture in Brazilians and its effect on the pattern of deleterious mutations. Proc Natl Acad Sci U S A. 2015 Jul 14; 112(28):8696-701. Kehdy FS, Gouveia MH, Machado M, Magalhães WC, Horimoto AR, Horta BL, Moreira RG, Leal TP, Scliar MO, Soares-Souza GB, Rodrigues-Soares F, Araújo GS, Zamudio R, Sant Anna HP, Santos HC, Duarte NE, Fiaccone RL, Figueiredo CA, Silva TM, Costa GN, Beleza S, Berg DE, Cabrera L, Debortoli G, Duarte D, Ghirotto S, Gilman RH, Gonçalves VF, Marrero AR, Muniz YC, Weissensteiner H, Yeager M, Rodrigues LC, Barreto ML, Lima-Costa MF, Pereira AC, Rodrigues MR, Tarazona-Santos E. PMID: 26124090.
      View in: PubMed   Mentions: 42     Fields:    Translation:Humans
    12. Complete Genome Sequences of Two Helicobacter pylori Strains from a Canadian Arctic Aboriginal Community. Genome Announc. 2015 Apr 16; 3(2). Kersulyte D, Bertoli MT, Tamma S, Keelan M, Munday R, Geary J, Veldhuyzen van Zanten S, Goodman KJ, Berg DE. PMID: 25883278.
      View in: PubMed   Mentions:
    13. Population genetic analyses of Helicobacter pylori isolates from Gambian adults and children. PLoS One. 2014; 9(10):e109466. Secka O, Moodley Y, Antonio M, Berg DE, Tapgun M, Walton R, Worwui A, Thomas V, Corrah T, Thomas JE, Adegbola RA. PMID: 25310300.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    14. Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp: implications for South American prehistory. BMC Evol Biol. 2014 Sep 30; 14:174. Scliar MO, Gouveia MH, Benazzo A, Ghirotto S, Fagundes NJ, Leal TP, Magalhães WC, Pereira L, Rodrigues MR, Soares-Souza GB, Cabrera L, Berg DE, Gilman RH, Bertorelle G, Tarazona-Santos E. PMID: 25266366.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    15. Systematic analysis of phosphotyrosine antibodies recognizing single phosphorylated EPIYA-motifs in CagA of Western-type Helicobacter pylori strains. PLoS One. 2014; 9(5):e96488. Lind J, Backert S, Pfleiderer K, Berg DE, Yamaoka Y, Sticht H, Tegtmeyer N. PMID: 24800748.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    16. Sequence divergence and conservation in genomes of Helicobacter cetorum strains from a dolphin and a whale. PLoS One. 2013; 8(12):e83177. Kersulyte D, Rossi M, Berg DE. PMID: 24358262.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    17. Expanded therapeutic potential in activity space of next-generation 5-nitroimidazole antimicrobials with broad structural diversity. Proc Natl Acad Sci U S A. 2013 Oct 22; 110(43):17564-9. Miyamoto Y, Kalisiak J, Korthals K, Lauwaet T, Cheung DY, Lozano R, Cobo ER, Upcroft P, Upcroft JA, Berg DE, Gillin FD, Fokin VV, Sharpless KB, Eckmann L. PMID: 24101497.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    18. Genome Sequences of Three hpAfrica2 Strains of Helicobacter pylori. Genome Announc. 2013 Sep 26; 1(5). Duncan SS, Bertoli MT, Kersulyte D, Valk PL, Tamma S, Segal I, McClain MS, Cover TL, Berg DE. PMID: 24072860.
      View in: PubMed   Mentions:
    19. Electron microscopic, genetic and protein expression analyses of Helicobacter acinonychis strains from a Bengal tiger. PLoS One. 2013; 8(8):e71220. Tegtmeyer N, Rivas Traverso F, Rohde M, Oyarzabal OA, Lehn N, Schneider-Brachert W, Ferrero RL, Fox JG, Berg DE, Backert S. PMID: 23940723.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    20. Robustness of Helicobacter pylori infection conferred by context-variable redundancy among cysteine-rich paralogs. PLoS One. 2013; 8(3):e59560. Putty K, Marcus SA, Mittl PR, Bogadi LE, Hunter AM, Arur S, Berg DE, Sethu P, Kalia A. PMID: 23555707.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    21. Antimicrobial susceptibility and resistance patterns among Helicobacter pylori strains from The Gambia, West Africa. Antimicrob Agents Chemother. 2013 Mar; 57(3):1231-7. Secka O, Berg DE, Antonio M, Corrah T, Tapgun M, Walton R, Thomas V, Galano JJ, Sancho J, Adegbola RA, Thomas JE. PMID: 23263004.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    22. Evolution of Helicobacter pylori susceptibility to antibiotics during a 10-year period in Lithuania. APMIS. 2013 May; 121(5):431-6. Kupcinskas L, Rasmussen L, Jonaitis L, Kiudelis G, Jørgensen M, Urbonaviciene N, Tamosiunas V, Kupcinskas J, Miciuleviciene J, Kadusevicius E, Berg D, Andersen LP. PMID: 23078193.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    23. Socioeconomic and nutritional factors account for the association of gastric cancer with Amerindian ancestry in a Latin American admixed population. PLoS One. 2012; 7(8):e41200. Pereira L, Zamudio R, Soares-Souza G, Herrera P, Cabrera L, Hooper CC, Cok J, Combe JM, Vargas G, Prado WA, Schneider S, Kehdy F, Rodrigues MR, Chanock SJ, Berg DE, Gilman RH, Tarazona-Santos E. PMID: 22870209.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCTClinical Trials
    24. Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India. Gut Pathog. 2012 May 25; 4(1):4. Chattopadhyay S, Patra R, Chatterjee R, De R, Alam J, Ramamurthy T, Chowdhury A, Nair GB, Berg DE, Mukhopadhyay AK. PMID: 22631862.
      View in: PubMed   Mentions:
    25. Xer recombinase and genome integrity in Helicobacter pylori, a pathogen without topoisomerase IV. PLoS One. 2012; 7(4):e33310. Debowski AW, Carnoy C, Verbrugghe P, Nilsson HO, Gauntlett JC, Fulurija A, Camilleri T, Berg DE, Marshall BJ, Benghezal M. PMID: 22511919.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    26. Mixed infection with cagA positive and cagA negative strains of Helicobacter pylori lowers disease burden in The Gambia. PLoS One. 2011; 6(11):e27954. Secka O, Antonio M, Berg DE, Tapgun M, Bottomley C, Thomas V, Walton R, Corrah T, Thomas JE, Adegbola RA. PMID: 22140492.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    27. Helicobacter pylori genotyping from American indigenous groups shows novel Amerindian vacA and cagA alleles and Asian, African and European admixture. PLoS One. 2011; 6(11):e27212. Camorlinga-Ponce M, Perez-Perez G, Gonzalez-Valencia G, Mendoza I, Peñaloza-Espinosa R, Ramos I, Kersulyte D, Reyes-Leon A, Romo C, Granados J, Muñoz L, Berg DE, Torres J. PMID: 22073291.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    28. Attenuated CagA oncoprotein in Helicobacter pylori from Amerindians in Peruvian Amazon. J Biol Chem. 2011 Aug 26; 286(34):29964-72. Suzuki M, Kiga K, Kersulyte D, Cok J, Hooper CC, Mimuro H, Sanada T, Suzuki S, Oyama M, Kozuka-Hata H, Kamiya S, Zou QM, Gilman RH, Berg DE, Sasakawa C. PMID: 21757722.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    29. A worldwide analysis of beta-defensin copy number variation suggests recent selection of a high-expressing DEFB103 gene copy in East Asia. Hum Mutat. 2011 Jul; 32(7):743-50. Hardwick RJ, Machado LR, Zuccherato LW, Antolinos S, Xue Y, Shawa N, Gilman RH, Cabrera L, Berg DE, Tyler-Smith C, Kelly P, Tarazona-Santos E, Hollox EJ. PMID: 21387465.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    30. PCR-based genotyping of Helicobacter pylori of Gambian children and adults directly from biopsy specimens and bacterial cultures. Gut Pathog. 2011 Apr 20; 3(1):5. Secka O, Antonio M, Tapgun M, Berg DE, Bottomley C, Thomas V, Walton R, Corrah T, Adegbola RA, Thomas JE. PMID: 21507253.
      View in: PubMed   Mentions:
    31. Point mutations in Helicobacter pylori's fur regulatory gene that alter resistance to metronidazole, a prodrug activated by chemical reduction. PLoS One. 2011 Mar 25; 6(3):e18236. Choi SS, Chivers PT, Berg DE. PMID: 21464913.
      View in: PubMed   Mentions: 15     Fields:    Translation:Cells
    32. Intact cag pathogenicity island of Helicobacter pylori without disease association in Kolkata, India. Int J Med Microbiol. 2011 Apr; 301(4):293-302. Patra R, Chattopadhyay S, De R, Datta S, Chowdhury A, Ramamurthy T, Nair GB, Berg DE, Mukhopadhyay AK. PMID: 21195664.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    33. Surface properties of Helicobacter pylori urease complex are essential for persistence. PLoS One. 2010 Nov 29; 5(11):e15042. Schoep TD, Fulurija A, Good F, Lu W, Himbeck RP, Schwan C, Choi SS, Berg DE, Mittl PR, Benghezal M, Marshall BJ. PMID: 21124783.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    34. Helicobacter pylori from Peruvian amerindians: traces of human migrations in strains from remote Amazon, and genome sequence of an Amerind strain. PLoS One. 2010 Nov 29; 5(11):e15076. Kersulyte D, Kalia A, Gilman RH, Mendez M, Herrera P, Cabrera L, Velapatiño B, Balqui J, Paredes Puente de la Vega F, Rodriguez Ulloa CA, Cok J, Hooper CC, Dailide G, Tamma S, Berg DE. PMID: 21124785.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    35. Expression of the BabA adhesin during experimental infection with Helicobacter pylori. Infect Immun. 2010 Apr; 78(4):1593-600. Styer CM, Hansen LM, Cooke CL, Gundersen AM, Choi SS, Berg DE, Benghezal M, Marshall BJ, Peek RM, Borén T, Solnick JV. PMID: 20123715.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansAnimalsCells
    36. Interleukin-1 beta single-nucleotide polymorphism's C allele is associated with elevated risk of gastric cancer in Helicobacter pylori-infected Peruvians. Am J Trop Med Hyg. 2009 Nov; 81(5):804-10. Gehmert S, Velapatiño B, Herrera P, Balqui J, Santivañez L, Cok J, Vargas G, Combe J, Passaro DJ, Wen S, Meyer F, Berg DE, Gilman RH. PMID: 19861615.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    37. Helicobacter Pylori's plasticity zones are novel transposable elements. PLoS One. 2009 Sep 03; 4(9):e6859. Kersulyte D, Lee W, Subramaniam D, Anant S, Herrera P, Cabrera L, Balqui J, Barabas O, Kalia A, Gilman RH, Berg DE. PMID: 19727398.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansAnimalsCells
    38. The secreted Helicobacter cysteine-rich protein A causes adherence of human monocytes and differentiation into a macrophage-like phenotype. FEBS Lett. 2009 May 19; 583(10):1637-43. Dumrese C, Slomianka L, Ziegler U, Choi SS, Kalia A, Fulurija A, Lu W, Berg DE, Benghezal M, Marshall B, Mittl PR. PMID: 19393649.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    39. Helicobacter pylori CagA phosphorylation-independent function in epithelial proliferation and inflammation. Cell Host Microbe. 2009 Jan 22; 5(1):23-34. Suzuki M, Mimuro H, Kiga K, Fukumatsu M, Ishijima N, Morikawa H, Nagai S, Koyasu S, Gilman RH, Kersulyte D, Berg DE, Sasakawa C. PMID: 19154985.
      View in: PubMed   Mentions: 108     Fields:    Translation:HumansAnimalsCells
    40. DNA-level diversity and relatedness of Helicobacter pylori strains in shantytown families in Peru and transmission in a developing-country setting. J Clin Microbiol. 2008 Dec; 46(12):3912-8. Herrera PM, Mendez M, Velapatiño B, Velapatiõ B, Santivañez L, Santivaez L, Balqui J, Finger SA, Sherman J, Zimic M, Cabrera L, Watanabe J, Rodríguez C, Gilman RH, Berg DE. PMID: 18842944.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    41. Isolation of tetracycline-resistant clinical Helicobacter pylori without mutations in 16S rRNA gene in Bangladesh. Microbiol Immunol. 2008 Oct; 52(10):508-11. Khan R, Nahar S, Mukhopadhyay AK, Berg DE, Ahmad MM, Okamoto K, Nair GB, Rahman M. PMID: 18822085.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    42. Revised nomenclature for transposable genetic elements. Plasmid. 2008 Nov; 60(3):167-73. Roberts AP, Chandler M, Courvalin P, Guédon G, Mullany P, Pembroke T, Rood JI, Smith CJ, Summers AO, Tsuda M, Berg DE. PMID: 18778731.
      View in: PubMed   Mentions: 53     Fields:    Translation:Cells
    43. Control of epithelial cell structure and developmental fate: lessons from Helicobacter pylori. Bioessays. 2008 Jun; 30(6):515-20. Mimuro H, Berg DE, Sasakawa C. PMID: 18478526.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    44. Gastrin-mediated interleukin-8 and cyclooxygenase-2 gene expression: differential transcriptional and posttranscriptional mechanisms. Gastroenterology. 2008 Apr; 134(4):1070-82. Subramaniam D, Ramalingam S, May R, Dieckgraefe BK, Berg DE, Pothoulakis C, Houchen CW, Wang TC, Anant S. PMID: 18395088.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    45. Culture independent analysis of ileal mucosa reveals a selective increase in invasive Escherichia coli of novel phylogeny relative to depletion of Clostridiales in Crohn's disease involving the ileum. ISME J. 2007 Sep; 1(5):403-18. Baumgart M, Dogan B, Rishniw M, Weitzman G, Bosworth B, Yantiss R, Orsi RH, Wiedmann M, McDonough P, Kim SG, Berg D, Schukken Y, Scherl E, Simpson KW. PMID: 18043660.
      View in: PubMed   Mentions: 193     Fields:    Translation:HumansCells
    46. Helicobacter pylori evolution: lineage- specific adaptations in homologs of eukaryotic Sel1-like genes. PLoS Comput Biol. 2007 Aug; 3(8):e151. Ogura M, Perez JC, Mittl PR, Lee HK, Dailide G, Tan S, Ito Y, Secka O, Dailidiene D, Putty K, Berg DE, Kalia A. PMID: 17696605.
      View in: PubMed   Mentions: 22     Fields:    Translation:Cells
    47. Urea sensitization caused by separation of Helicobacter pylori RNA polymerase beta and beta' subunits. Helicobacter. 2007 Apr; 12(2):103-11. Dailidiene D, Tan S, Ogura K, Zhang M, Lee AH, Severinov K, Berg DE. PMID: 17309746.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    48. Alaska sentinel surveillance for antimicrobial resistance in Helicobacter pylori isolates from Alaska native persons, 1999-2003. Helicobacter. 2006 Dec; 11(6):581-8. Bruce MG, Bruden DL, McMahon BJ, Hennessy TW, Reasonover A, Morris J, Hurlburt DA, Peters H, Sacco F, Martinez P, Swenson M, Berg DE, Parks D, Parkinson AJ. PMID: 17083381.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCellsPHPublic Health
    49. Cag pathogenicity island-independent up-regulation of matrix metalloproteinases-9 and -2 secretion and expression in mice by Helicobacter pylori infection. J Biol Chem. 2006 Nov 10; 281(45):34651-62. Kundu P, Mukhopadhyay AK, Patra R, Banerjee A, Berg DE, Swarnakar S. PMID: 16966323.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    50. Contraselectable streptomycin susceptibility determinant for genetic manipulation and analysis of Helicobacter pylori. Appl Environ Microbiol. 2006 Sep; 72(9):5908-14. Dailidiene D, Dailide G, Kersulyte D, Berg DE. PMID: 16957210.
      View in: PubMed   Mentions: 26     Fields:    Translation:Cells
    51. Quantitative effect of luxS gene inactivation on the fitness of Helicobacter pylori. Appl Environ Microbiol. 2006 Oct; 72(10):6615-22. Lee WK, Ogura K, Loh JT, Cover TL, Berg DE. PMID: 16936059.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    52. Adherent and invasive Escherichia coli is associated with granulomatous colitis in boxer dogs. Infect Immun. 2006 Aug; 74(8):4778-92. Simpson KW, Dogan B, Rishniw M, Goldstein RE, Klaessig S, McDonough PL, German AJ, Yates RM, Russell DG, Johnson SE, Berg DE, Harel J, Bruant G, McDonough SP, Schukken YH. PMID: 16861666.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    53. Effectiveness of enterobacterial repetitive intergenic consensus PCR and random amplified polymorphic DNA fingerprinting for Helicobacter pylori strain differentiation. Appl Environ Microbiol. 2006 Jul; 72(7):4713-6. Finger SA, Velapatiño B, Kosek M, Santivañez L, Dailidiene D, Quino W, Balqui J, Herrera P, Berg DE, Gilman RH. PMID: 16820463.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
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    206. recA-independent recombination between repeated IS50 elements is not caused by an IS50-encoded function. J Bacteriol. 1985 Mar; 161(3):928-32. Phadnis SH, Berg DE. PMID: 2982795.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    207. Bacterial transposon Tn5: evolutionary inferences. Mol Biol Evol. 1984 Sep; 1(5):411-22. Berg DE, Berg CM, Sasakawa C. PMID: 6100989.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    208. Transposon Tn5: specific sequence recognition and conservative transposition. Cold Spring Harb Symp Quant Biol. 1984; 49:215-26. Berg DE, Lodge J, Sasakawa C, Nag DK, Phadnis SH, Weston-Hafer K, Carle GF. PMID: 6099236.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    209. Sequences essential for transposition at the termini of IS50. Proc Natl Acad Sci U S A. 1983 Dec; 80(23):7293-7. Sasakawa C, Carle GF, Berg DE. PMID: 6316355.
      View in: PubMed   Mentions: 29     Fields:    Translation:Cells
    210. Specificity of transposon Tn5 insertion. Genetics. 1983 Dec; 105(4):813-28. Berg DE, Schmandt MA, Lowe JB. PMID: 6315531.
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    211. Mechanism of F factor-enhanced excision of transposon Tn5. Gene. 1983 Apr; 22(1):1-7. Berg DE, Egner C, Lowe JB. PMID: 6305767.
      View in: PubMed   Mentions: 12     Fields:    Translation:Cells
    212. Control of transposon Tn5 transposition in Escherichia coli. Proc Natl Acad Sci U S A. 1982 Dec; 79(23):7450-4. Sasakawa C, Lowe JB, McDivitt L, Berg DE. PMID: 6296834.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    213. Structure and stability of transposon 5-mediated cointegrates. J Mol Biol. 1982 Aug 25; 159(4):557-80. Hirschel BJ, Galas DJ, Berg DE, Chandler M. PMID: 6292435.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    214. IS50-mediated inverse transposition. Discrimination between the two ends of an IS element. J Mol Biol. 1982 Aug 05; 159(2):257-71. Sasakawa C, Berg DE. PMID: 6292434.
      View in: PubMed   Mentions: 23     Fields:    Translation:Cells
    215. Inverted repeats of Tn5 are transposable elements. Proc Natl Acad Sci U S A. 1982 Apr; 79(8):2632-5. Berg DE, Johnsrud L, McDivitt L, Ramabhadran R, Hirschel BJ. PMID: 6283538.
      View in: PubMed   Mentions: 24     Fields:    Translation:Cells
    216. Excision of transposon Tn5 is dependent on the inverted repeats but not on the transposase function of Tn5. Proc Natl Acad Sci U S A. 1981 Jan; 78(1):459-63. Egner C, Berg DE. PMID: 6264444.
      View in: PubMed   Mentions: 64     Fields:    Translation:Cells
    217. Insertion, excision, and inversion of Tn5. Cold Spring Harb Symp Quant Biol. 1981; 45 Pt 1:115-23. Berg DE, Egner C, Hirschel BJ, Howard J, Johnsrud L, Jorgensen RA, Tlsty TD. PMID: 6271454.
      View in: PubMed   Mentions: 40     Fields:    Translation:Cells
    218. Nomenclature of transposable elements in prokaryotes. Plasmid. 1979 Jul; 2(3):466-73. Campbell A, Starlinger P, Berg DE, Botstein D, Lederberg EM, Novick RP, Szybalski W. PMID: 384423.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    219. Absence of DNA sequences homologous to transposable element Tn5 (Kan) in the chromosome of Escherichia coli K-12. J Bacteriol. 1978 Oct; 136(1):419-22. Berg DE, Drummond M. PMID: 361699.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
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