Deanna Greene

Title(s)Assistant Professor, Cognitive Science
SchoolVc-academic Affairs
Address9500 Gilman Drive #
La Jolla CA 92093
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    1. Accuracy and reliability of diffusion imaging models. Neuroimage. 2022 Jul 01; 254:119138. Seider NA, Adeyemo B, Miller R, Newbold DJ, Hampton JM, Scheidter KM, Rutlin J, Laumann TO, Roland JL, Montez DF, Van AN, Zheng A, Marek S, Kay BP, Bretthorst GL, Schlaggar BL, Greene DJ, Wang Y, Petersen SE, Barch DM, Gordon EM, Snyder AZ, Shimony JS, Dosenbach NUF. PMID: 35339687.
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    2. Reproducible brain-wide association studies require thousands of individuals. Nature. 2022 03; 603(7902):654-660. Marek S, Tervo-Clemmens B, Calabro FJ, Montez DF, Kay BP, Hatoum AS, Donohue MR, Foran W, Miller RL, Hendrickson TJ, Malone SM, Kandala S, Feczko E, Miranda-Dominguez O, Graham AM, Earl EA, Perrone AJ, Cordova M, Doyle O, Moore LA, Conan GM, Uriarte J, Snider K, Lynch BJ, Wilgenbusch JC, Pengo T, Tam A, Chen J, Newbold DJ, Zheng A, Seider NA, Van AN, Metoki A, Chauvin RJ, Laumann TO, Greene DJ, Petersen SE, Garavan H, Thompson WK, Nichols TE, Yeo BTT, Barch DM, Luna B, Fair DA, Dosenbach NUF. PMID: 35296861; PMCID: PMC8991999.
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    3. Fractality of tics as a quantitative assessment tool for Tourette syndrome. J R Soc Interface. 2022 02; 19(187):20210742. Beeler P, Jensen NO, Kim S, Robichaux-Viehoever A, Schlaggar BL, Greene DJ, Black KJ, Chakrabarty RK. PMID: 35193387; PMCID: PMC8864347.
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    4. Individualized Functional Subnetworks Connect Human Striatum and Frontal Cortex. Cereb Cortex. 2021 Oct 28. Gordon EM, Laumann TO, Marek S, Newbold DJ, Hampton JM, Seider NA, Montez DF, Nielsen AM, Van AN, Zheng A, Miller R, Siegel JS, Kay BP, Snyder AZ, Greene DJ, Schlaggar BL, Petersen SE, Nelson SM, Dosenbach NUF. PMID: 34718460.
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    5. Parallel hippocampal-parietal circuits for self- and goal-oriented processing. Proc Natl Acad Sci U S A. 2021 08 24; 118(34). Zheng A, Montez DF, Marek S, Gilmore AW, Newbold DJ, Laumann TO, Kay BP, Seider NA, Van AN, Hampton JM, Alexopoulos D, Schlaggar BL, Sylvester CM, Greene DJ, Shimony JS, Nelson SM, Wig GS, Gratton C, McDermott KB, Raichle ME, Gordon EM, Dosenbach NUF. PMID: 34404728; PMCID: PMC8403906.
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    6. What have we really learned from functional connectivity in clinical populations? Neuroimage. 2021 11 15; 242:118466. Zhang J, Kucyi A, Raya J, Nielsen AN, Nomi JS, Damoiseaux JS, Greene DJ, Horovitz SG, Uddin LQ, Whitfield-Gabrieli S. PMID: 34389443.
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    7. Course of tic disorders over the lifespan. Curr Dev Disord Rep. 2021 Jun; 8(2):121-132. Black KJ, Kim S, Yang NY, Greene DJ. PMID: 34178575; PMCID: PMC8223879.
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    8. Correlates and clinical implications of tic suppressibility. Curr Dev Disord Rep. 2021 Jun; 8(2):112-120. Ueda K, Kim S, Greene DJ, Black KJ. PMID: 34178574; PMCID: PMC8224814.
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    9. Cingulo-opercular control network and disused motor circuits joined in standby mode. Proc Natl Acad Sci U S A. 2021 03 30; 118(13). Newbold DJ, Gordon EM, Laumann TO, Seider NA, Montez DF, Gross SJ, Zheng A, Nielsen AN, Hoyt CR, Hampton JM, Ortega M, Adeyemo B, Miller DB, Van AN, Marek S, Schlaggar BL, Carter AR, Kay BP, Greene DJ, Raichle ME, Petersen SE, Snyder AZ, Dosenbach NUF. PMID: 33753484; PMCID: PMC8020791.
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    10. Precision Functional Mapping of the Subcortex and Cerebellum. Curr Opin Behav Sci. 2021 Aug; 40:12-18. Marek S, Greene DJ. PMID: 33604420; PMCID: PMC7886263.
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    11. Default-mode network streams for coupling to language and control systems. Proc Natl Acad Sci U S A. 2020 07 21; 117(29):17308-17319. Gordon EM, Laumann TO, Marek S, Raut RV, Gratton C, Newbold DJ, Greene DJ, Coalson RS, Snyder AZ, Schlaggar BL, Petersen SE, Dosenbach NUF, Nelson SM. PMID: 32632019; PMCID: PMC7382234.
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    12. Plasticity and Spontaneous Activity Pulses in Disused Human Brain Circuits. Neuron. 2020 08 05; 107(3):580-589.e6. Newbold DJ, Laumann TO, Hoyt CR, Hampton JM, Montez DF, Raut RV, Ortega M, Mitra A, Nielsen AN, Miller DB, Adeyemo B, Nguyen AL, Scheidter KM, Tanenbaum AB, Van AN, Marek S, Schlaggar BL, Carter AR, Greene DJ, Gordon EM, Raichle ME, Petersen SE, Snyder AZ, Dosenbach NUF. PMID: 32778224; PMCID: PMC7419711.
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    13. Hippocampal Volume in Provisional Tic Disorder Predicts Tic Severity at 12-Month Follow-up. J Clin Med. 2020 Jun 03; 9(6). Kim S, Greene DJ, D'Andrea CB, Bihun EC, Koller JM, O'Reilly B, Schlaggar BL, Black KJ. PMID: 32503289; PMCID: PMC7355974.
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    14. The New Tics study: A Novel Approach to Pathophysiology and Cause of Tic Disorders. J Psychiatr Brain Sci. 2020; 5. Black KJ, Kim S, Schlaggar BL, Greene DJ. PMID: 32587895; PMCID: PMC7316401.
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    15. Individual-specific functional connectivity of the amygdala: A substrate for precision psychiatry. Proc Natl Acad Sci U S A. 2020 02 18; 117(7):3808-3818. Sylvester CM, Yu Q, Srivastava AB, Marek S, Zheng A, Alexopoulos D, Smyser CD, Shimony JS, Ortega M, Dierker DL, Patel GH, Nelson SM, Gilmore AW, McDermott KB, Berg JJ, Drysdale AT, Perino MT, Snyder AZ, Raut RV, Laumann TO, Gordon EM, Barch DM, Rogers CE, Greene DJ, Raichle ME, Dosenbach NUF. PMID: 32015137; PMCID: PMC7035483.
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    16. Integrative and Network-Specific Connectivity of the Basal Ganglia and Thalamus Defined in Individuals. Neuron. 2020 02 19; 105(4):742-758.e6. Greene DJ, Marek S, Gordon EM, Siegel JS, Gratton C, Laumann TO, Gilmore AW, Berg JJ, Nguyen AL, Dierker D, Van AN, Ortega M, Newbold DJ, Hampton JM, Nielsen AN, McDermott KB, Roland JL, Norris SA, Nelson SM, Snyder AZ, Schlaggar BL, Petersen SE, Dosenbach NUF. PMID: 31836321; PMCID: PMC7035165.
      View in: PubMed   Mentions: 28     Fields:    Translation:Humans
    17. Machine Learning With Neuroimaging: Evaluating Its Applications in Psychiatry. Biol Psychiatry Cogn Neurosci Neuroimaging. 2020 08; 5(8):791-798. Nielsen AN, Barch DM, Petersen SE, Schlaggar BL, Greene DJ. PMID: 31982357; PMCID: PMC8746222.
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    18. Correction of respiratory artifacts in MRI head motion estimates. Neuroimage. 2020 03; 208:116400. Fair DA, Miranda-Dominguez O, Snyder AZ, Perrone A, Earl EA, Van AN, Koller JM, Feczko E, Tisdall MD, van der Kouwe A, Klein RL, Mirro AE, Hampton JM, Adeyemo B, Laumann TO, Gratton C, Greene DJ, Schlaggar BL, Hagler DJ, Watts R, Garavan H, Barch DM, Nigg JT, Petersen SE, Dale AM, Feldstein-Ewing SW, Nagel BJ, Dosenbach NUF. PMID: 31778819; PMCID: PMC7307712.
      View in: PubMed   Mentions: 31     Fields:    Translation:Humans
    19. Defining Individual-Specific Functional Neuroanatomy for Precision Psychiatry. Biol Psychiatry. 2020 07 01; 88(1):28-39. Gratton C, Kraus BT, Greene DJ, Gordon EM, Laumann TO, Nelson SM, Dosenbach NUF, Petersen SE. PMID: 31916942; PMCID: PMC7203002.
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    20. A set of functionally-defined brain regions with improved representation of the subcortex and cerebellum. Neuroimage. 2020 02 01; 206:116290. Seitzman BA, Gratton C, Marek S, Raut RV, Dosenbach NUF, Schlaggar BL, Petersen SE, Greene DJ. PMID: 31634545; PMCID: PMC6981071.
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    21. Trait-like variants in human functional brain networks. Proc Natl Acad Sci U S A. 2019 11 05; 116(45):22851-22861. Seitzman BA, Gratton C, Laumann TO, Gordon EM, Adeyemo B, Dworetsky A, Kraus BT, Gilmore AW, Berg JJ, Ortega M, Nguyen A, Greene DJ, McDermott KB, Nelson SM, Lessov-Schlaggar CN, Schlaggar BL, Dosenbach NUF, Petersen SE. PMID: 31611415; PMCID: PMC6842602.
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    22. Identifying reproducible individual differences in childhood functional brain networks: An ABCD study. Dev Cogn Neurosci. 2019 12; 40:100706. Marek S, Tervo-Clemmens B, Nielsen AN, Wheelock MD, Miller RL, Laumann TO, Earl E, Foran WW, Cordova M, Doyle O, Perrone A, Miranda-Dominguez O, Feczko E, Sturgeon D, Graham A, Hermosillo R, Snider K, Galassi A, Nagel BJ, Ewing SWF, Eggebrecht AT, Garavan H, Dale AM, Greene DJ, Barch DM, Fair DA, Luna B, Dosenbach NUF. PMID: 31614255; PMCID: PMC6927479.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    23. Atypical Functional Connectivity in Tourette Syndrome Differs Between Children and Adults. Biol Psychiatry. 2020 01 15; 87(2):164-173. Nielsen AN, Gratton C, Church JA, Dosenbach NUF, Black KJ, Petersen SE, Schlaggar BL, Greene DJ. PMID: 31472979; PMCID: PMC6925331.
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    24. Tic Suppression in Children With Recent-Onset Tics Predicts 1-Year Tic Outcome. J Child Neurol. 2019 10; 34(12):757-764. Kim S, Greene DJ, Robichaux-Viehoever A, Bihun EC, Koller JM, Acevedo H, Schlaggar BL, Black KJ. PMID: 31241402; PMCID: PMC6733613.
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    25. High-fidelity mapping of repetition-related changes in the parietal memory network. Neuroimage. 2019 10 01; 199:427-439. Gilmore AW, Nelson SM, Laumann TO, Gordon EM, Berg JJ, Greene DJ, Gratton C, Nguyen AL, Ortega M, Hoyt CR, Coalson RS, Schlaggar BL, Petersen SE, Dosenbach NUF, McDermott KB. PMID: 31175969; PMCID: PMC6688913.
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    26. Emergent Functional Network Effects in Parkinson Disease. Cereb Cortex. 2019 06 01; 29(6):2509-2523. Gratton C, Koller JM, Shannon W, Greene DJ, Maiti B, Snyder AZ, Petersen SE, Perlmutter JS, Campbell MC. PMID: 29878081; PMCID: PMC6519699.
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    27. Evaluating the Prediction of Brain Maturity From Functional Connectivity After Motion Artifact Denoising. Cereb Cortex. 2019 06 01; 29(6):2455-2469. Nielsen AN, Greene DJ, Gratton C, Dosenbach NUF, Petersen SE, Schlaggar BL. PMID: 29850877; PMCID: PMC6519700.
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    28. Emergent Functional Network Effects in Parkinson Disease. Cereb Cortex. 2019 04 01; 29(4):1701. Gratton C, Koller JM, Shannon W, Greene DJ, Maiti B, Snyder AZ, Petersen SE, Perlmutter JS, Campbell MC. PMID: 30418543; PMCID: PMC7302739.
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    29. Provisional Tic Disorder is not so transient. Sci Rep. 2019 03 08; 9(1):3951. Kim S, Greene DJ, Bihun EC, Koller JM, Hampton JM, Acevedo H, Reiersen AM, Schlaggar BL, Black KJ. PMID: 30850688; PMCID: PMC6408476.
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    30. Spatial and Temporal Organization of the Individual Human Cerebellum. Neuron. 2018 11 21; 100(4):977-993.e7. Marek S, Siegel JS, Gordon EM, Raut RV, Gratton C, Newbold DJ, Ortega M, Laumann TO, Adeyemo B, Miller DB, Zheng A, Lopez KC, Berg JJ, Coalson RS, Nguyen AL, Dierker D, Van AN, Hoyt CR, McDermott KB, Norris SA, Shimony JS, Snyder AZ, Nelson SM, Barch DM, Schlaggar BL, Raichle ME, Petersen SE, Greene DJ, Dosenbach NUF. PMID: 30473014; PMCID: PMC6351081.
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    31. Three Distinct Sets of Connector Hubs Integrate Human Brain Function. Cell Rep. 2018 08 14; 24(7):1687-1695.e4. Gordon EM, Lynch CJ, Gratton C, Laumann TO, Gilmore AW, Greene DJ, Ortega M, Nguyen AL, Schlaggar BL, Petersen SE, Dosenbach NUF, Nelson SM. PMID: 30110625; PMCID: PMC6886580.
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    32. Patterns and Predictors of Tic Suppressibility in Youth With Tic Disorders. Front Psychiatry. 2018; 9:188. Conelea CA, Wellen B, Woods DW, Greene DJ, Black KJ, Specht M, Himle MB, Lee HJ, Capriotti M. PMID: 29875706; PMCID: PMC5974106.
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    33. Functional Brain Networks Are Dominated by Stable Group and Individual Factors, Not Cognitive or Daily Variation. Neuron. 2018 04 18; 98(2):439-452.e5. Gratton C, Laumann TO, Nielsen AN, Greene DJ, Gordon EM, Gilmore AW, Nelson SM, Coalson RS, Snyder AZ, Schlaggar BL, Dosenbach NUF, Petersen SE. PMID: 29673485; PMCID: PMC5912345.
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    34. Behavioral interventions for reducing head motion during MRI scans in children. Neuroimage. 2018 05 01; 171:234-245. Greene DJ, Koller JM, Hampton JM, Wesevich V, Van AN, Nguyen AL, Hoyt CR, McIntyre L, Earl EA, Klein RL, Shimony JS, Petersen SE, Schlaggar BL, Fair DA, Dosenbach NUF. PMID: 29337280; PMCID: PMC5857466.
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    35. On the Stability of BOLD fMRI Correlations. Cereb Cortex. 2017 10 01; 27(10):4719-4732. Laumann TO, Snyder AZ, Mitra A, Gordon EM, Gratton C, Adeyemo B, Gilmore AW, Nelson SM, Berg JJ, Greene DJ, McCarthy JE, Tagliazucchi E, Laufs H, Schlaggar BL, Dosenbach NUF, Petersen SE. PMID: 27591147; PMCID: PMC6248456.
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    36. Real-time motion analytics during brain MRI improve data quality and reduce costs. Neuroimage. 2017 11 01; 161:80-93. Dosenbach NUF, Koller JM, Earl EA, Miranda-Dominguez O, Klein RL, Van AN, Snyder AZ, Nagel BJ, Nigg JT, Nguyen AL, Wesevich V, Greene DJ, Fair DA. PMID: 28803940; PMCID: PMC5731481.
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    37. Precision Functional Mapping of Individual Human Brains. Neuron. 2017 Aug 16; 95(4):791-807.e7. Gordon EM, Laumann TO, Gilmore AW, Newbold DJ, Greene DJ, Berg JJ, Ortega M, Hoyt-Drazen C, Gratton C, Sun H, Hampton JM, Coalson RS, Nguyen AL, McDermott KB, Shimony JS, Snyder AZ, Schlaggar BL, Petersen SE, Nelson SM, Dosenbach NUF. PMID: 28757305; PMCID: PMC5576360.
      View in: PubMed   Mentions: 199     Fields:    Translation:HumansCells
    38. Provisional Tic Disorder: What to tell parents when their child first starts ticcing. F1000Res. 2016; 5:696. Black KJ, Black ER, Greene DJ, Schlaggar BL. PMID: 27158458; PMCID: PMC4850871.
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    39. Multivariate pattern classification of pediatric Tourette syndrome using functional connectivity MRI. Dev Sci. 2016 07; 19(4):581-98. Greene DJ, Church JA, Dosenbach NU, Nielsen AN, Adeyemo B, Nardos B, Petersen SE, Black KJ, Schlaggar BL. PMID: 26834084; PMCID: PMC4945470.
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    40. Considerations for MRI study design and implementation in pediatric and clinical populations. Dev Cogn Neurosci. 2016 Apr; 18:101-112. Greene DJ, Black KJ, Schlaggar BL. PMID: 26754461; PMCID: PMC4834255.
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    41. Neuroimaging in Tourette Syndrome: Research Highlights From 2014-2015. Curr Dev Disord Rep. 2015 Dec; 2(4):300-308. Greene DJ, Schlaggar BL, Black KJ. PMID: 26543796; PMCID: PMC4629775.
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    42. Clinical correlates of parenting stress in children with Tourette syndrome and in typically developing children. J Pediatr. 2015 May; 166(5):1297-1302.e3. Stewart SB, Greene DJ, Lessov-Schlaggar CN, Church JA, Schlaggar BL. PMID: 25769235; PMCID: PMC4414884.
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    43. Reward enhances tic suppression in children within months of tic disorder onset. Dev Cogn Neurosci. 2015 Feb; 11:65-74. Greene DJ, Koller JM, Robichaux-Viehoever A, Bihun EC, Schlaggar BL, Black KJ. PMID: 25220075; PMCID: PMC4323948.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCTClinical Trials
    44. A revised method for measuring distraction by tactile stimulation. F1000Res. 2014; 3:188. Schechter JR, Greene DJ, Koller JM, Black KJ. PMID: 25285209; PMCID: PMC4176419.
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    45. Developmental changes in the organization of functional connections between the basal ganglia and cerebral cortex. J Neurosci. 2014 Apr 23; 34(17):5842-54. Greene DJ, Laumann TO, Dubis JW, Ihnen SK, Neta M, Power JD, Pruett JR, Black KJ, Schlaggar BL. PMID: 24760844; PMCID: PMC3996213.
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    46. A pilot study of basal ganglia and thalamus structure by high dimensional mapping in children with Tourette syndrome. F1000Res. 2013; 2:207. Williams AC, McNeely ME, Greene DJ, Church JA, Warren SL, Hartlein JM, Schlaggar BL, Black KJ, Wang L. PMID: 24715957; PMCID: PMC3976104.
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    47. Towards objectively quantifying sensory hypersensitivity: a pilot study of the "Ariana effect". PeerJ. 2013; 1:e121. Panagopoulos VN, Greene DJ, Campbell MC, Black KJ. PMID: 23940834; PMCID: PMC3740136.
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    48. Spatial orienting of attention simultaneously cued by automatic social and nonsocial cues. Exp Brain Res. 2012 Aug; 221(1):115-22. Greene DJ, Zaidel E. PMID: 22760583.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    49. Insights for treatment in Tourette syndrome from fMRI. Trends Cogn Sci. 2012 Jan; 16(1):15-6. Greene DJ, Schlaggar BL. PMID: 22133579.
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    50. Atypical neural networks for social orienting in autism spectrum disorders. Neuroimage. 2011 May 01; 56(1):354-62. Greene DJ, Colich N, Iacoboni M, Zaidel E, Bookheimer SY, Dapretto M. PMID: 21334443; PMCID: PMC3091391.
      View in: PubMed   Mentions: 48     Fields:    Translation:Humans
    51. Hemispheric differences in attentional orienting by social cues. Neuropsychologia. 2011 Jan; 49(1):61-8. Greene DJ, Zaidel E. PMID: 21093465.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    52. The neural correlates of social attention: automatic orienting to social and nonsocial cues. Psychol Res. 2009 Jul; 73(4):499-511. Greene DJ, Mooshagian E, Kaplan JT, Zaidel E, Iacoboni M. PMID: 19350270; PMCID: PMC2694932.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    53. Measuring attention in the hemispheres: the lateralized attention network test (LANT). Brain Cogn. 2008 Feb; 66(1):21-31. Greene DJ, Barnea A, Herzberg K, Rassis A, Neta M, Raz A, Zaidel E. PMID: 17590491; PMCID: PMC4283820.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
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