Dario Meluzzi

Title(s)Assistant Researcher, Medicine
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    See-ing the 4D Nucleome: Enhancer Cooperativity in Phase Separated Structures
    NIH K01DK119687Sep 7, 2018 - Aug 31, 2021
    Role: Principal Investigator
    Enhancer networks and chromosomal architecture in ligand-regulated gene transcription programs
    NIH F32DK112682Dec 1, 2016 - Nov 30, 2018
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Long-distance association of topological boundaries through nuclear condensates. Proc Natl Acad Sci U S A. 2022 08 09; 119(32):e2206216119. Gamliel A, Meluzzi D, Oh S, Jiang N, Destici E, Rosenfeld MG, Nair SJ. PMID: 35914133; PMCID: PMC9371644.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    2. Efficient in vitro and in vivo RNA editing via recruitment of endogenous ADARs using circular guide RNAs. Nat Biotechnol. 2022 06; 40(6):938-945. Katrekar D, Yen J, Xiang Y, Saha A, Meluzzi D, Savva Y, Mali P. PMID: 35145312; PMCID: PMC9232839.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    3. Comprehensive interrogation of the ADAR2 deaminase domain for engineering enhanced RNA editing activity and specificity. Elife. 2022 01 19; 11. Katrekar D, Xiang Y, Palmer N, Saha A, Meluzzi D, Mali P. PMID: 35044296; PMCID: PMC8809894.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    4. Computational approaches for inferring 3D conformations of chromatin from chromosome conformation capture data. Methods. 2020 10 01; 181-182:24-34. Meluzzi D, Arya G. PMID: 31470090; PMCID: PMC7044057.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    5. Phase separation of ligand-activated enhancers licenses cooperative chromosomal enhancer assembly. Nat Struct Mol Biol. 2019 03; 26(3):193-203. Nair SJ, Yang L, Meluzzi D, Oh S, Yang F, Friedman MJ, Wang S, Suter T, Alshareedah I, Gamliel A, Ma Q, Zhang J, Hu Y, Tan Y, Ohgi KA, Jayani RS, Banerjee PR, Aggarwal AK, Rosenfeld MG. PMID: 30833784; PMCID: PMC6709854.
      View in: PubMed   Mentions: 120     Fields:    Translation:HumansCells
    6. In vivo RNA editing of point mutations via RNA-guided adenosine deaminases. Nat Methods. 2019 03; 16(3):239-242. Katrekar D, Chen G, Meluzzi D, Ganesh A, Worlikar A, Shih YR, Varghese S, Mali P. PMID: 30737497; PMCID: PMC6395520.
      View in: PubMed   Mentions: 59     Fields:    Translation:HumansAnimalsCells
    7. Quantification of DNA cleavage specificity in Hi-C experiments. Nucleic Acids Res. 2016 Jan 08; 44(1):e4. Meluzzi D, Arya G. PMID: 26264668; PMCID: PMC4705682.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    8. Efficient estimation of contact probabilities from inter-bead distance distributions in simulated polymer chains. J Phys Condens Matter. 2015 Feb 18; 27(6):064120. Meluzzi D, Arya G. PMID: 25563926.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    9. Recovering ensembles of chromatin conformations from contact probabilities. Nucleic Acids Res. 2013 Jan 07; 41(1):63-75. Meluzzi D, Arya G. PMID: 23143266; PMCID: PMC3592477.
      View in: PubMed   Mentions: 32     Fields:    Translation:Cells
    10. Computational prediction of efficient splice sites for trans-splicing ribozymes. RNA. 2012 Mar; 18(3):590-602. Meluzzi D, Olson KE, Dolan GF, Arya G, M?ller UF. PMID: 22274956; PMCID: PMC3285945.
      View in: PubMed   Mentions: 7     Fields:    Translation:Cells
    11. Policing starter unit selection of the enterocin type II polyketide synthase by the type II thioesterase EncL. Bioorg Med Chem. 2011 Nov 15; 19(22):6633-8. Kalaitzis JA, Cheng Q, Meluzzi D, Xiang L, Izumikawa M, Dorrestein PC, Moore BS. PMID: 21531566; PMCID: PMC3162089.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    12. Biophysics of knotting. Annu Rev Biophys. 2010; 39:349-66. Meluzzi D, Smith DE, Arya G. PMID: 20192771.
      View in: PubMed   Mentions: 14     Fields:    Translation:Cells
    13. Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides. Anal Chem. 2009 Jun 01; 81(11):4200-9. Liu WT, Ng J, Meluzzi D, Bandeira N, Gutierrez M, Simmons TL, Schultz AW, Linington RG, Moore BS, Gerwick WH, Pevzner PA, Dorrestein PC. PMID: 19413302; PMCID: PMC2765223.
      View in: PubMed   Mentions: 33     Fields:    Translation:Cells
    14. Top-down mass spectrometry on low-resolution instruments: characterization of phosphopantetheinylated carrier domains in polyketide and non-ribosomal biosynthetic pathways. Bioorg Med Chem Lett. 2008 May 15; 18(10):3107-11. Meluzzi D, Zheng WH, Hensler M, Nizet V, Dorrestein PC. PMID: 18006314; PMCID: PMC2519147.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    15. Enzymatic total synthesis of enterocin polyketides. Nat Chem Biol. 2007 Sep; 3(9):557-8. Cheng Q, Xiang L, Izumikawa M, Meluzzi D, Moore BS. PMID: 17704772.
      View in: PubMed   Mentions: 51     Fields:    
    16. Low-temperature structural transitions: circumventing the broken-ergodicity problem. Phys Rev Lett. 2007 Mar 09; 98(10):105701. Sharapov VA, Meluzzi D, Mandelshtam VA. PMID: 17358547.
      View in: PubMed   Mentions: 10     Fields:    
    17. Structural transformations and melting in neon clusters: quantum versus classical mechanics. Phys Rev Lett. 2006 Mar 24; 96(11):113401. Frantsuzov PA, Meluzzi D, Mandelshtam VA. PMID: 16605820.
      View in: PubMed   Mentions:    Fields:    
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