Daniela Boassa

Title(s), Neurosciences
SchoolVc-health Sciences-schools
Address9500 Gilman Drive #
La Jolla CA 92093
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    Collapse Research 
    Collapse Research Activities and Funding
    Mechanism of RB-to-EB Conversion in Chlamydia
    NIH R01AI151212Feb 1, 2020 - Jan 31, 2025
    Role: Co-Principal Investigator
    Developing new tools for high throughput analysis of microcircuits and synapse ultrastructure using tagged vesicular transporters and deep learning.
    NIH RF1MH120685Aug 1, 2019 - Jul 31, 2022
    Role: Co-Principal Investigator
    New Probe and Methods for Correlated LM & EM
    NIH R01GM086197Sep 30, 2008 - Apr 30, 2021
    Role: Co-Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Fe-TAMLs as a new class of small molecule peroxidase probes for correlated light and electron microscopy. bioRxiv. 2023 Aug 26. Adams SR, Mackey MR, Ramachandra R, Deerinck TJ, Castillon GA, Phan S, Hu J, Boassa D, Ngo JT, Ellisman MH. PMID: 37662194; PMCID: PMC10473768.
      View in: PubMed   Mentions:
    2. CaBLAM! A high-contrast bioluminescent Ca 2+ indicator derived from an engineered Oplophorus gracilirostris luciferase. bioRxiv. 2023 Jun 26. Lambert GG, Crespo EL, Murphy J, Boassa D, Luong S, Hu J, Sprecher B, Tree MO, Orcutt R, Heydari D, Bell AB, Torreblanca Zanca A, Hakimi A, Lipscombe D, Moore CI, Hochgeschwender U, Shaner NC. PMID: 37425712; PMCID: PMC10327125.
      View in: PubMed   Mentions:
    3. DOPAL initiates αSynuclein-dependent impaired proteostasis and degeneration of neuronal projections in Parkinson's disease. NPJ Parkinsons Dis. 2023 Mar 25; 9(1):42. Masato A, Plotegher N, Terrin F, Sandre M, Faustini G, Thor A, Adams S, Berti G, Cogo S, De Lazzari F, Fontana CM, Martinez PA, Strong R, Bandopadhyay R, Bisaglia M, Bellucci A, Greggio E, Dalla Valle L, Boassa D, Bubacco L. PMID: 36966140; PMCID: PMC10039907.
      View in: PubMed   Mentions: 4  
    4. The LRRK2 signaling network converges on a centriolar phospho-Rab10/RILPL1 complex to cause deficits in centrosome cohesion and cell polarization. Biol Open. 2022 08 15; 11(8). Lara Ordóñez AJ, Fasiczka R, Fernández B, Naaldijk Y, Fdez E, Blanca Ramírez M, Phan S, Boassa D, Hilfiker S. PMID: 35776681; PMCID: PMC9346292.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    5. Distinct tau neuropathology and cellular profiles of an APOE3 Christchurch homozygote protected against autosomal dominant Alzheimer's dementia. Acta Neuropathol. 2022 09; 144(3):589-601. Sepulveda-Falla D, Sanchez JS, Almeida MC, Boassa D, Acosta-Uribe J, Vila-Castelar C, Ramirez-Gomez L, Baena A, Aguillon D, Villalba-Moreno ND, Littau JL, Villegas A, Beach TG, White CL, Ellisman M, Krasemann S, Glatzel M, Johnson KA, Sperling RA, Reiman EM, Arboleda-Velasquez JF, Kosik KS, Lopera F, Quiroz YT. PMID: 35838824; PMCID: PMC9381462.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    6. Unconventional tonicity-regulated nuclear trafficking of NFAT5 mediated by KPNB1, XPOT and RUVBL2. J Cell Sci. 2022 07 01; 135(13). Cheung CY, Huang TT, Chow N, Zhang S, Zhao Y, Chau MP, Chan WC, Wong CCL, Boassa D, Phan S, Ellisman MH, Yates JR, Xu S, Yu Z, Zhang Y, Zhang R, Ng LL, Ko BCB. PMID: 35635291; PMCID: PMC9377714.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    7. Clathrin packets move in slow axonal transport and deliver functional payloads to synapses. Neuron. 2021 09 15; 109(18):2884-2901.e7. Ganguly A, Sharma R, Boyer NP, Wernert F, Phan S, Boassa D, Parra L, Das U, Caillol G, Han X, Yates JR, Ellisman MH, Leterrier C, Roy S. PMID: 34534453; PMCID: PMC8457040.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    8. Conformation and dynamics of the kinase domain drive subcellular location and activation of LRRK2. Proc Natl Acad Sci U S A. 2021 06 08; 118(23). Schmidt SH, Weng JH, Aoto PC, Boassa D, Mathea S, Silletti S, Hu J, Wallbott M, Komives EA, Knapp S, Herberg FW, Taylor SS. PMID: 34088839; PMCID: PMC8201809.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    9. Genetic Probe for Visualizing Glutamatergic Synapses and Vesicles by 3D Electron Microscopy. ACS Chem Neurosci. 2021 02 17; 12(4):626-639. Steinkellner T, Madany M, Haberl MG, Zell V, Li C, Hu J, Mackey M, Ramachandra R, Adams S, Ellisman MH, Hnasko TS, Boassa D. PMID: 33522227; PMCID: PMC7899175.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    10. The In Situ Structure of Parkinson's Disease-Linked LRRK2. Cell. 2020 09 17; 182(6):1508-1518.e16. Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E. PMID: 32783917; PMCID: PMC7869717.
      View in: PubMed   Mentions: 70     Fields:    Translation:HumansCells
    11. C. elegans MAGU-2/Mpp5 homolog regulates epidermal phagocytosis and synapse density. J Neurogenet. 2020 Sep-Dec; 34(3-4):298-306. Cherra SJ, Goncharov A, Boassa D, Ellisman M, Jin Y. PMID: 32366143; PMCID: PMC7609615.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    12. Correction to Directed Evolution of Split APEX2 Peroxidase. ACS Chem Biol. 2019 Dec 20; 14(12):2942. Han Y, Branon TC, Martell JD, Boassa D, Shechner D, Ellisman MH, Ting A. PMID: 31657543.
      View in: PubMed   Mentions:    Fields:    
    13. Impaired dopamine metabolism in Parkinson's disease pathogenesis. Mol Neurodegener. 2019 08 20; 14(1):35. Masato A, Plotegher N, Boassa D, Bubacco L. PMID: 31488222; PMCID: PMC6728988.
      View in: PubMed   Mentions: 68     Fields:    Translation:HumansAnimalsCells
    14. Split-miniSOG for Spatially Detecting Intracellular Protein-Protein Interactions by Correlated Light and Electron Microscopy. Cell Chem Biol. 2019 10 17; 26(10):1407-1416.e5. Boassa D, Lemieux SP, Lev-Ram V, Hu J, Xiong Q, Phan S, Mackey M, Ramachandra R, Peace RE, Adams SR, Ellisman MH, Ngo JT. PMID: 31378710; PMCID: PMC6800643.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    15. The dynamic switch mechanism that leads to activation of LRRK2 is embedded in the DFGψ motif in the kinase domain. Proc Natl Acad Sci U S A. 2019 07 23; 116(30):14979-14988. Schmidt SH, Knape MJ, Boassa D, Mumdey N, Kornev AP, Ellisman MH, Taylor SS, Herberg FW. PMID: 31292254; PMCID: PMC6660771.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    16. Directed Evolution of Split APEX2 Peroxidase. ACS Chem Biol. 2019 04 19; 14(4):619-635. Han Y, Branon TC, Martell JD, Boassa D, Shechner D, Ellisman MH, Ting A. PMID: 30848125; PMCID: PMC6548188.
      View in: PubMed   Mentions: 55     Fields:    Translation:HumansAnimalsCells
    17. CDeep3M-Plug-and-Play cloud-based deep learning for image segmentation. Nat Methods. 2018 09; 15(9):677-680. Haberl MG, Churas C, Tindall L, Boassa D, Phan S, Bushong EA, Madany M, Akay R, Deerinck TJ, Peltier ST, Ellisman MH. PMID: 30171236; PMCID: PMC6548193.
      View in: PubMed   Mentions: 56     Fields:    
    18. High-quality ultrastructural preservation using cryofixation for 3D electron microscopy of genetically labeled tissues. Elife. 2018 05 11; 7. Tsang TK, Bushong EA, Boassa D, Hu J, Romoli B, Phan S, Dulcis D, Su CY, Ellisman MH. PMID: 29749931; PMCID: PMC5988420.
      View in: PubMed   Mentions: 21     Fields:    Translation:Animals
    19. Replication-dependent size reduction precedes differentiation in Chlamydia trachomatis. Nat Commun. 2018 01 03; 9(1):45. Lee JK, Enciso GA, Boassa D, Chander CN, Lou TH, Pairawan SS, Guo MC, Wan FYM, Ellisman MH, Sütterlin C, Tan M. PMID: 29298975; PMCID: PMC5752669.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansCells
    20. Activity-dependent trafficking of lysosomes in dendrites and dendritic spines. J Cell Biol. 2017 08 07; 216(8):2499-2513. Goo MS, Sancho L, Slepak N, Boassa D, Deerinck TJ, Ellisman MH, Bloodgood BL, Patrick GN. PMID: 28630145; PMCID: PMC5551717.
      View in: PubMed   Mentions: 72     Fields:    Translation:HumansAnimalsCells
    21. Parkinson Sac Domain Mutation in Synaptojanin 1 Impairs Clathrin Uncoating at Synapses and Triggers Dystrophic Changes in Dopaminergic Axons. Neuron. 2017 Feb 22; 93(4):882-896.e5. Cao M, Wu Y, Ashrafi G, McCartney AJ, Wheeler H, Bushong EA, Boassa D, Ellisman MH, Ryan TA, De Camilli P. PMID: 28231468; PMCID: PMC5340420.
      View in: PubMed   Mentions: 73     Fields:    Translation:HumansAnimalsCells
    22. A Rab5 endosomal pathway mediates Parkin-dependent mitochondrial clearance. Nat Commun. 2017 01 30; 8:14050. Hammerling BC, Najor RH, Cortez MQ, Shires SE, Leon LJ, Gonzalez ER, Boassa D, Phan S, Thor A, Jimenez RE, Li H, Kitsis RN, Dorn GW, Sadoshima J, Ellisman MH, Gustafsson ÅB. PMID: 28134239; PMCID: PMC5290275.
      View in: PubMed   Mentions: 86     Fields:    Translation:AnimalsCells
    23. 3D reconstruction of biological structures: automated procedures for alignment and reconstruction of multiple tilt series in electron tomography. Adv Struct Chem Imaging. 2017; 2:8. Phan S, Boassa D, Nguyen P, Wan X, Lanman J, Lawrence A, Ellisman MH. PMID: 27547706; PMCID: PMC4972035.
      View in: PubMed   Mentions: 24  
    24. Click-EM for imaging metabolically tagged nonprotein biomolecules. Nat Chem Biol. 2016 06; 12(6):459-65. Ngo JT, Adams SR, Deerinck TJ, Boassa D, Rodriguez-Rivera F, Palida SF, Bertozzi CR, Ellisman MH, Tsien RY. PMID: 27110681; PMCID: PMC4871776.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    25. NF-κB Restricts Inflammasome Activation via Elimination of Damaged Mitochondria. Cell. 2016 Feb 25; 164(5):896-910. Zhong Z, Umemura A, Sanchez-Lopez E, Liang S, Shalapour S, Wong J, He F, Boassa D, Perkins G, Ali SR, McGeough MD, Ellisman MH, Seki E, Gustafsson AB, Hoffman HM, Diaz-Meco MT, Moscat J, Karin M. PMID: 26919428; PMCID: PMC4769378.
      View in: PubMed   Mentions: 463     Fields:    Translation:AnimalsCells
    26. Advances in molecular probe-based labeling tools and their application to multiscale multimodal correlated microscopies. Journal of Chemical Biology. 2015; 8(4):143-151. MH Ellisman, TJ Deerinck, KY Kim, EA Bushong, S Phan, AY Ting, D Boassa. . View Publication.
    27. Astrocytes phagocytose focal dystrophies from shortening myelin segments in the optic nerve of Xenopus laevis at metamorphosis. Proc Natl Acad Sci U S A. 2015 Aug 18; 112(33):10509-14. Mills EA, Davis CH, Bushong EA, Boassa D, Kim KY, Ellisman MH, Marsh-Armstrong N. PMID: 26240339; PMCID: PMC4547286.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    28. Pannexin2 oligomers localize in the membranes of endosomal vesicles in mammalian cells while Pannexin1 channels traffic to the plasma membrane. Front Cell Neurosci. 2014; 8:468. Boassa D, Nguyen P, Hu J, Ellisman MH, Sosinsky GE. PMID: 25698922; PMCID: PMC4313697.
      View in: PubMed   Mentions: 18  
    29. Correlative Microscopy for Localization of Proteins In Situ: Pre-embedding Immuno-Electron Microscopy Using FluoroNanogold, Gold Enhancement, and Low-Temperature Resin. Methods Mol Biol. 2015; 1318:173-80. Boassa D. PMID: 26160575; PMCID: PMC5716471.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    30. Mpl traffics to the cell surface through conventional and unconventional routes. Traffic. 2014 Sep; 15(9):961-82. Cleyrat C, Darehshouri A, Steinkamp MP, Vilaine M, Boassa D, Ellisman MH, Hermouet S, Wilson BS. PMID: 24931576; PMCID: PMC4141020.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    31. Transcellular degradation of axonal mitochondria. Proc Natl Acad Sci U S A. 2014 Jul 01; 111(26):9633-8. Davis CH, Kim KY, Bushong EA, Mills EA, Boassa D, Shih T, Kinebuchi M, Phan S, Zhou Y, Bihlmeyer NA, Nguyen JV, Jin Y, Ellisman MH, Marsh-Armstrong N. PMID: 24979790; PMCID: PMC4084443.
      View in: PubMed   Mentions: 283     Fields:    Translation:AnimalsCells
    32. Mapping the subcellular distribution of α-synuclein in neurons using genetically encoded probes for correlated light and electron microscopy: implications for Parkinson's disease pathogenesis. J Neurosci. 2013 Feb 06; 33(6):2605-15. Boassa D, Berlanga ML, Yang MA, Terada M, Hu J, Bushong EA, Hwang M, Masliah E, George JM, Ellisman MH. PMID: 23392688; PMCID: PMC3711410.
      View in: PubMed   Mentions: 71     Fields:    Translation:HumansAnimalsCells
    33. Cardiomyocyte ATP release through pannexin 1 aids in early fibroblast activation. Am J Physiol Heart Circ Physiol. 2012 Nov 15; 303(10):H1208-18. Dolmatova E, Spagnol G, Boassa D, Baum JR, Keith K, Ambrosi C, Kontaridis MI, Sorgen PL, Sosinsky GE, Duffy HS. PMID: 22982782; PMCID: PMC3517637.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    34. LRRK2 Parkinson disease mutations enhance its microtubule association. Hum Mol Genet. 2012 Feb 15; 21(4):890-9. Kett LR, Boassa D, Ho CC, Rideout HJ, Hu J, Terada M, Ellisman M, Dauer WT. PMID: 22080837; PMCID: PMC3263991.
      View in: PubMed   Mentions: 98     Fields:    Translation:HumansAnimalsCells
    35. Pannexin channels are not gap junction hemichannels. Channels (Austin). 2011 May-Jun; 5(3):193-7. Sosinsky GE, Boassa D, Dermietzel R, Duffy HS, Laird DW, MacVicar B, Naus CC, Penuela S, Scemes E, Spray DC, Thompson RJ, Zhao HB, Dahl G. PMID: 21532340; PMCID: PMC3704572.
      View in: PubMed   Mentions: 187     Fields:    Translation:HumansAnimalsCells
    36. Trafficking and recycling of the connexin43 gap junction protein during mitosis. Traffic. 2010 Nov; 11(11):1471-86. Boassa D, Solan JL, Papas A, Thornton P, Lampe PD, Sosinsky GE. PMID: 20716111; PMCID: PMC3272544.
      View in: PubMed   Mentions: 36     Fields:    Translation:AnimalsCells
    37. Pannexin1 and Pannexin2 channels show quaternary similarities to connexons and different oligomerization numbers from each other. J Biol Chem. 2010 Aug 06; 285(32):24420-31. Ambrosi C, Gassmann O, Pranskevich JN, Boassa D, Smock A, Wang J, Dahl G, Steinem C, Sosinsky GE. PMID: 20516070; PMCID: PMC2915678.
      View in: PubMed   Mentions: 85     Fields:    Translation:HumansAnimalsCells
    38. Analysis of four connexin26 mutant gap junctions and hemichannels reveals variations in hexamer stability. Biophys J. 2010 May 19; 98(9):1809-19. Ambrosi C, Boassa D, Pranskevich J, Smock A, Oshima A, Xu J, Nicholson BJ, Sosinsky GE. PMID: 20441744; PMCID: PMC2862186.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    39. Trafficking dynamics of glycosylated pannexin 1 proteins. Cell Commun Adhes. 2008 May; 15(1):119-32. Boassa D, Qiu F, Dahl G, Sosinsky G. PMID: 18649184; PMCID: PMC2528835.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansAnimalsCells
    40. Pannexin1 channels contain a glycosylation site that targets the hexamer to the plasma membrane. J Biol Chem. 2007 Oct 26; 282(43):31733-43. Boassa D, Ambrosi C, Qiu F, Dahl G, Gaietta G, Sosinsky G. PMID: 17715132.
      View in: PubMed   Mentions: 159     Fields:    Translation:HumansCells
    41. Ion channel function of aquaporin-1 natively expressed in choroid plexus. J Neurosci. 2006 Jul 26; 26(30):7811-9. Boassa D, Stamer WD, Yool AJ. PMID: 16870726; PMCID: PMC6674226.
      View in: PubMed   Mentions: 45     Fields:    Translation:AnimalsCells
    42. Physiological roles of aquaporins in the choroid plexus. Curr Top Dev Biol. 2005; 67:181-206. Boassa D, Yool AJ. PMID: 15949534.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimals
    43. Single amino acids in the carboxyl terminal domain of aquaporin-1 contribute to cGMP-dependent ion channel activation. BMC Physiol. 2003 Oct 15; 3:12. Boassa D, Yool AJ. PMID: 14561230; PMCID: PMC269983.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    44. A fascinating tail: cGMP activation of aquaporin-1 ion channels. Trends Pharmacol Sci. 2002 Dec; 23(12):558-62. Boassa D, Yool AJ. PMID: 12457773.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimalsCells
    45. Cloned human aquaporin-1 is a cyclic GMP-gated ion channel. Mol Pharmacol. 2000 Mar; 57(3):576-88. Anthony TL, Brooks HL, Boassa D, Leonov S, Yanochko GM, Regan JW, Yool AJ. PMID: 10692499.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansAnimalsCells
    46. Functional morphology of the dorsal vessel in the adult fly Protophormia terraenovae (diptera, calliphoridae). J Morphol. 1999 Apr; 240(1):15-31. Angioy AM, Boassa D, Dulcis D. PMID: 29847884.
      View in: PubMed   Mentions: 2     Fields:    
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